mRNA_L-elsbetiae_contig631.14954.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
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Overview
Homology
BLAST of mRNA_L-elsbetiae_contig631.14954.1 vs. uniprot
Match: A0A6H5KE17_9PHAE (RWP-RK domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE17_9PHAE) HSP 1 Score: 617 bits (1592), Expect = 7.860e-199 Identity = 541/1182 (45.77%), Postives = 621/1182 (52.54%), Query Frame = 1
Query: 31 SQSSPSASGSRLQRGFPSFKLLDDERARAKRFRNRVPSAGSRGDFGSSEGGVGEVPTMSTLLFQDTRTPPQHPGAGPRRVPSFNLANDVFHSMSHASSWGSGAGGNMNMFGFGGPESNDGEGEDVVQRLDDAAFNDLNFLTMEGVGPSDRSGTPQRESSEAGLDTKFLENRAAAFEGALDRYVAEGCGGNHP------QGSAPKDQTGVNAVVGRAGSARDSLSTASSSXXXXXXXXXXXXILGSNTSMMSRKDSHSILESDVFDLEEGLPTFSASMEEYLNRQLEAAEQSLDHSVDDGHALG---------HNVNGSGGGEQGRSASMDVVGEAGSSPTLGSTRSVVVKSEQGRYLGGPGEIPQETASRQHVQVKGETFGLDMPKRRTRNGRSSQYQQHEQQYPEHGSDEEAGSSHS--EYEPPAP--REGKXXXXXXXXXXXXXXXXRAAKAGGIL-SGARAASSPGGVLRRGL-LKRQTSEDVAARLPLEVLECFYHVPLNIAAQQLTVSLTMLKKLCRAYGVKRWPHRQVSSLDKTTSRLEAKIKARKDCGKDAPSLVRKLTQARKRRSVIIKTASAGLDAAVLNSIFTCRPGEIDEDFLLSSTDVAKAVKKIKFSPEVDHKDR-FESEPXXXXXXXXXXXXXXXXXXXXARGTAFKRLS-------------GTPKKKMCARDMLATLP-FATKPAAVVKSVSAPPPAFEPAGRA--------------KSAVPKKPDTKIGNKPGVKPAAKTERLSTPARRTRKAAASSTKVRKGAVAAAVNQSALSVDGVASVPPTRGKATASPGSYMSDGSGLDDYAGGAGF--------------AAAGSMPASSPVLSFGSSPRTRAPITGYSGVFGTGLHHQVSGRGQ-QGSQATAGNE--SVGDPFGQAPAAAQFRGGESAPS-MQKVAHLPPWVGAGGSRAMG-YGEWRRGVPSSQSSPLEKRKQQQLPGARSDSPSTAATLDSFNLKLSLESPTRGSGTVPXXXXXXXXXXHGHPYMLHRQHPHHQQARFNHI------NWVGGRYPGQPQQPYGFPADFMSPVDTRFARQQHGSGNREFHAFPKVDDINDTGAGNIDACSGGDAAAETCD-----IVEGATETATAV---------------------------TDSPEDPAPRRTGFMSYLLHQRP 3255
SQ+ SAS SRLQRG PSFKL DDE AR+KRFRNRVPS GSR GS+EGG G PT T L P GPR V SF LA+DVF MSH SSWGSG GGN FGFG P S DGEGED VQRLDDA NDLNF TMEG+GP + T RE+ GLDTK + R+++ G DRY EG G + Q + K++ V A+V GSA + L ASS+ +L S SM R + LE +VF LEEGLPTFSA+MEEYLNRQLEAAE SLD D ALG +V GSGG G + V G AG+SP TRSVVVKSE R G + Q T Q Q +G +RRTR R +Q EYEPP+ REGK X SG R AS+ LRRG LKRQTSEDVAARLPLEVLECFYHVPLN+AAQQL VSLTMLKKLCRAYGVKRWPHRQVSSLDKTTS+LE KIKAR+D GKDAPSLVRKLTQARKRR VIIKTASAGLD +VLNSIFTCRPG+IDED LL STDVAKAV+KI+F DHK ES+ XXXXXXXXXXXXXXXXX T KK R + A P F++KP AV KSV++PPPAFEP GR K+A K +G+ G K K + PA+R + A+ + K RKG AAA +S S AS P + A + AA ++SPV S G P RAP+ YSGVFG GL H S R +G A + SVG GQ P +A GE A S +++ A P W+G GG RA G YGEWR G S +SSP QQ L A SDSP+T ATLDSF+LKLSLESP RG XXXXXX NW + P+D F+ QHG G+R FHAF KVDD + +G DA+ D + G+T A AV + + +D PRRTGFMSYLLHQ P
Sbjct: 13 SQAPSSASSSRLQRGIPSFKLSDDELARSKRFRNRVPSDGSRDGAGSNEGG-GATPT--TTLGGT-------PAPGPRSVSSFTLASDVFR-MSHNSSWGSGTGGNF--FGFG-PASVDGEGEDAVQRLDDATLNDLNFFTMEGIGPGNLPETAPRETLGPGLDTKPTDTRSSSDGGGPDRYSIEGDGSHGGPRSDLVQLAVAKEEMVVPAIVDGTGSASNILRRASSARD----------VLRSG-SMGGRDSNRDFLEGNVFGLEEGLPTFSAAMEEYLNRQLEAAEHSLDDPAGDERALGCMTDARDGGASVGGSGG--TGEEXHLGVAGRAGASPIRNPTRSVVVKSECSRSRGASAGVLQGTTYSQRTQEEGRGLEAKATERRTRYKRGAQQXXXXXXXXXXXXXXXXXXXXXXXEYEPPSCTLREGKVKKGRGRRRGAAATTXXXXXXXXXXXSGVRTASASSAFLRRGSSLKRQTSEDVAARLPLEVLECFYHVPLNVAAQQLNVSLTMLKKLCRAYGVKRWPHRQVSSLDKTTSKLEDKIKARRDGGKDAPSLVRKLTQARKRRKVIIKTASAGLDVSVLNSIFTCRPGDIDEDMLLLSTDVAKAVEKIQFRQHADHKGSGAESDSAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATAKKTSRIRAVFAGTPAFSSKPPAVAKSVASPPPAFEPGGRXXXXXXXXXXXXXXXKTAGNKPTSGSLGS--GRKLCMKAGSPAEPAKRFKGDASMTAKGRKGVTAAAA-RSMSSAGRRASFPQKKCTAATAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTAACSPADSTSPVFSIGRPPHIRAPMISYSGVFGVGLRHTASSRASSRGGDPMAFTKVRSVGGSSGQTPVSALVTAGECASSQVRQAARAPAWIGGGGKRAKGSYGEWRGGALSLRSSP----SQQHLSDAGSDSPTTTATLDSFDLKLSLESPPRGPPQASRPRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNWAAXXXXXXXXXXXXXXQLYGCPIDICFSPPQHGPGSRGFHAFSKVDDSREATGTGAPRSTGDDASRPPDDKKIGGVSTGSTAAAAAVXXXXXXXXXXXXXXXXXXXXXXXXALASSTSQDTEPRRTGFMSYLLHQAP 1160
BLAST of mRNA_L-elsbetiae_contig631.14954.1 vs. uniprot
Match: D7FS12_ECTSI (Putative NIN-like transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS12_ECTSI) HSP 1 Score: 526 bits (1355), Expect = 2.530e-168 Identity = 391/713 (54.84%), Postives = 432/713 (60.59%), Query Frame = 1
Query: 7 SGGSPGTTSQSSPSASGSRLQRGFPSFKLLDDERARAKRFRNRVPSAGSRGDFGSSEGGVGEVPTMSTLLFQDTRTPPQHPGAGPRRVPSFNLANDVFHSMSHASSWGSGAGGNMNMFGFGGPESNDGEGEDVVQRLDDAAFNDLNFLTMEGVGPSDRSGTPQRESSEAGLDTKFLENRAAAFEGALDRYVAEGCGGNHP-------QGSAPKDQTGVNAVVGRAGSARDSLSTASSSXXXXXXXXXXXXILGSNTSMMSRKDSHSILESDVFDLEEGLPTFSASMEEYLNRQLEAAEQSLDHSVDDGHALGHNVNGSGGGE-------QGRSASMDVVGEAGSSPTLGSTRSVVVKSEQGRYLGGPGEIPQETASRQHVQVKGETFGLDMPKRRTRNGRSSQYQQHEQQYPEHGSD--EEAGSSHSEYEPPA--PREGKXXXXXXXXXXXXXXXX-RAAKAGGILSGARAASSPGGVLRRG-LLKRQTSEDVAARLPLEVLECFYHVPLNIAAQQLTVSLTMLKKLCRAYGVKRWPHRQVSSLDKTTSRLEAKIKARKDCGKDAPSLVRKLTQARKRRSVIIKTASAGLDAAVLNSIFTCRPGEIDEDFLLSSTDVAKAVKKIKFSPEVDHKDRFESEPXXXXXXXXXXXXXXXXXXXXARGTAFKRLSGTP----KKKMCARDMLATLP-FATKPAAVVKSVSAPPPAFEP 2070
SGG + SQ+ AS SRLQRG PSFKL DDE AR+KRFRNRVPS GSR GS EGG PT +T L P GPR V SF LA+DVF MSH SSWGSG G N FGFG P S DGEGED VQR DDA FNDLNF TMEG+GPSD T RE+S GLDTK + R++ G DRY E GG H Q + K++ V A+V GSA + L ASS+ + SM R + LE +VFDLE GLPTFS +MEEYLNRQLEAAE SLD D A G GG + V G G+SP TRSVVVK E R G + Q T Q Q +G +RRTR R +Q Q+ E A SS SEYEPP PREGK RAAK SG R AS LRRG LKRQTSEDVAARLPLEVLECFYHVPLN+AAQQL VSLTMLKKLCRAYGVKRWPHRQVSSLDKTTS+LE KIK R+D GKDAPSLVRKLTQARKRR VIIKTASAGLDA+VLNSIFTCRPG+IDED LLSSTDVAKAV+K++F + DHK XXXXXXXXXXXXXXXX + G K S KK R + A P F +KP AV KSV++PPPAFEP
Sbjct: 5 SGGLQDSRSQAPSLASSSRLQRGIPSFKLSDDELARSKRFRNRVPSDGSRDGAGSHEGGG---PTPTTTLEGI-------PAPGPRSVSSFTLASDVFR-MSHNSSWGSGTG--SNFFGFGLP-SVDGEGEDAVQRFDDATFNDLNFFTMEGIGPSDLPETAPRETSGPGLDTKPTDTRSSTDGGGPDRYSIER-GGTHGGPRSDPLQPAVAKEEMVVPAIVDGTGSASNILRRASSARDVLR-----------SASMSGRDSNRDFLEGNVFDLEGGLPTFSTAMEEYLNRQLEAAEHSLDDPAGDERAFGCMAGARDGGAGVGXXXXXXXXXXLGVAGRVGASPIEHPTRSVVVKQECRRSRGASDGVLQGTTHSQCTQEEGGGLETKAAERRTRCKRGTQQQKXXXXXXXXXXXXXEYADSSQSEYEPPTCTPREGKAKKGRGRRRGAAATTATRAAKTSSGSSGVRTASVSSAFLRRGGSLKRQTSEDVAARLPLEVLECFYHVPLNVAAQQLNVSLTMLKKLCRAYGVKRWPHRQVSSLDKTTSKLEDKIKTRRDGGKDAPSLVRKLTQARKRRKVIIKTASAGLDASVLNSIFTCRPGDIDEDMLLSSTDVAKAVEKVQFRQDADHKGSGAESDSAXXXXXXXXXXXXXXXXVESYGPRAKPPSXXXXXXXKKTTRIRAVFAATPAFCSKPPAVAKSVASPPPAFEP 691
BLAST of mRNA_L-elsbetiae_contig631.14954.1 vs. uniprot
Match: A0A835Z7T4_9STRA (RWP-RK domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7T4_9STRA) HSP 1 Score: 141 bits (356), Expect = 1.030e-35 Identity = 77/118 (65.25%), Postives = 91/118 (77.12%), Query Frame = 1
Query: 1402 KRQTSEDVAARLPLEVLECFYHVPLNIAAQQLTVSLTMLKKLCRAYGVKRWPHRQVSSLDKTTSRLEAKIKARKDCGKDAPSLVRKLTQARKRRSVIIKTASAGLDAAVLNSIFTCRP 1755
KRQTSE+VA RLP+ VLE FYHVPLNIAA++L+VSLTMLKKLCR YG+KRWPHRQVSSL+K+ +LE KI D K A +L K R +R +IIKTASAGLD VLN++F RP
Sbjct: 2 KRQTSEEVAKRLPVSVLEEFYHVPLNIAARELSVSLTMLKKLCRQYGIKRWPHRQVSSLNKSLGKLEEKILGASD-DKAAAALRAKAGPLRTKRELIIKTASAGLDPDVLNAVFAARP 118
BLAST of mRNA_L-elsbetiae_contig631.14954.1 vs. uniprot
Match: A0A836CMG7_9STRA (RWP-RK domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMG7_9STRA) HSP 1 Score: 111 bits (277), Expect = 2.640e-21 Identity = 64/151 (42.38%), Postives = 95/151 (62.91%), Query Frame = 1
Query: 1336 GGILSGARAASSPGGVLRRGLLKRQTSEDVAARLPLEVLECFYHVPLNIAAQQLTVSLTMLKKLCRAYGVKRWPHRQVSSLDKTTSRLEAKIKARKDCGKDAPSLVRKLTQARKRRSVIIKTASAGLDAAVLNSIFTCRPGEIDEDFLLSS 1788
GG G+ A+S V G+ RQ S +V R+ L VLE Y PL AA++L VS TMLKKLCR YG++RWPHRQ+ S++K + + +A+ D + ++ +K+R++++KTAS GL+A++ ++IF RPGE+D D L SS
Sbjct: 67 GGEGMGSDDAASGDDVDEHGVKIRQNSREVGQRITLSVLEACYGEPLTAAARRLGVSNTMLKKLCRRYGIQRWPHRQIRSIEKEVQK-HMQARAQATSAVDIAACDERIALLQKKRAIVVKTASCGLNASLRSAIFMARPGELDADQLFSS 216
BLAST of mRNA_L-elsbetiae_contig631.14954.1 vs. uniprot
Match: A0A7S3YET5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YET5_HETAK) HSP 1 Score: 93.6 bits (231), Expect = 1.970e-16 Identity = 48/125 (38.40%), Postives = 78/125 (62.40%), Query Frame = 1
Query: 1396 LLKRQTSEDVAARLPLEVLECFYHVPLNIAAQQLTVSLTMLKKLCRAYGVKRWPHRQVSSLDKTTSRLEAKIKARKDCGKDAPSLVRKLTQARKRRSVIIKTASAGLDAAVLNSIFTCRPGEIDE 1770
L RQ ++ R+PL +LE Y +PL A Q+ VSLTM+K++CR Y +KRWPHRQ+ S+ KT +L+ ++ DA ++R++ +++S+I K AS GL+A + +F PGE+++
Sbjct: 240 LSARQNFDENLKRIPLHILESKYELPLKEVADQIGVSLTMMKQICRHYKIKRWPHRQMKSIMKTLHQLKDRLNMVDPNSSDAQEIMRQVQLTEQKKSLITKMASRGLNAEERSLLFLSHPGELNK 364
BLAST of mRNA_L-elsbetiae_contig631.14954.1 vs. uniprot
Match: A0A835Z1M5_9STRA (Putative NIN-like transcription factor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1M5_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 4.140e-15 Identity = 45/128 (35.16%), Postives = 81/128 (63.28%), Query Frame = 1
Query: 1426 AARLPLEVLECFYHVPLNIAAQQLTVSLTMLKKLCRAYGVKRWPHRQVSSLDKTTSRLEAKIKARKDCGKDAPSLVRKLTQARKRRSVIIKTASAGLDAAVLNSIFTCRPGEIDEDFLLSSTDVAKAV 1809
A + LE+L+ FY+VPL A++L +SLT+LKK+CR YG++RWPHRQ+ S++K+ L +I ++ L +L K++ ++ + AS+GL +A+ N++F P +++ED + + A ++
Sbjct: 11 ADNITLELLQSFYNVPLAELAKELGLSLTLLKKICRKYGIQRWPHRQIRSINKSAQELTERINGATS-HEERAELQSQLHLLEKKKRLVTRGASSGLQSALRNALFLANPEQLEEDAVFDAPGAAPSM 137
BLAST of mRNA_L-elsbetiae_contig631.14954.1 vs. uniprot
Match: H6WBB7_VAULI (Putative NIN-like transcription factor n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WBB7_VAULI) HSP 1 Score: 87.4 bits (215), Expect = 1.400e-14 Identity = 47/150 (31.33%), Postives = 87/150 (58.00%), Query Frame = 1
Query: 1396 LLKRQTSEDVAARLPLEVLECFYHVPLNIAAQQLTVSLTMLKKLCRAYGVKRWPHRQVSSLDKTTSRLEAKIKARKDCGKDAPSLVRKLTQARKRRSVIIKTASAGLDAAVLNSIFTCRPGEIDEDFLLSSTDVAKAVKKIKFSPEVDHK 1845
++++ T++ + LE+L+ +Y+VPL A++L +SLT+LKK+CR +G++RWPHRQ+ S++K L +I + + A L ++ K+R ++ K AS+GL A+ N+IF P + E+ + ++ + P +D K
Sbjct: 1 MIRQSTTQIEPEEITLELLQSYYNVPLAELAKELGLSLTLLKKICRKFGIQRWPHRQIRSINKNIQDLNERINSVNSPDEHA-ELRNQIGLLEKKRRLVTKGASSGLHTAMRNAIFLANPEHLQEESMFEGLHRFPQLQTPQQHPSIDRK 149
BLAST of mRNA_L-elsbetiae_contig631.14954.1 vs. uniprot
Match: A0A835YTG3_9STRA (Putative NIN-like transcription factor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTG3_9STRA) HSP 1 Score: 86.3 bits (212), Expect = 3.750e-14 Identity = 45/119 (37.82%), Postives = 77/119 (64.71%), Query Frame = 1
Query: 1426 AARLPLEVLECFYHVPLNIAAQQLTVSLTMLKKLCRAYGVKRWPHRQVSSLDKTTSRLEAKIKARKDCGKDAPS---LVRKLTQARKRRSVIIKTASAGLDAAVLNSIFTCRPGEIDED 1773
A ++ LE+L+ +Y+VPL A++L +SLT+LKK+CR +G++RWPHRQ+ SL+KT L K R C A + +L K++ ++ + AS+GL +A+ N++F P +++E+
Sbjct: 8 ADQITLELLQSYYNVPLAELAKELGLSLTLLKKICRKFGIQRWPHRQIRSLNKTAQEL----KERAQCALTAEEHAEIEAQLQLLEKKKRLVTRGASSGLQSALRNALFLANPEQLEEE 122
BLAST of mRNA_L-elsbetiae_contig631.14954.1 vs. uniprot
Match: D7FN15_ECTSI (Putative NIN-like transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN15_ECTSI) HSP 1 Score: 84.0 bits (206), Expect = 4.370e-14 Identity = 43/111 (38.74%), Postives = 73/111 (65.77%), Query Frame = 1
Query: 1402 KRQTSEDVAARLPLEVLECFYHVPLNIAAQQLTVSLTMLKKLCRAYGVKRWPHRQVSSLDKTTSRLEAKIKARKDCGKDAPSLVRKLTQARKRRSVIIKTASAGLDAAVLN 1734
KR+ D+A R+P+E++ +++ PL ++A+ + +S+T LK+LCR +GVKRWPHRQ+S L++T LEA+ A + ++ ++ +L Q +RR VII+ A D + N
Sbjct: 57 KREVLADIAKRIPVELMREYFNYPLRVSAEAMHISVTTLKRLCRRHGVKRWPHRQISGLNRTLGDLEAQHDAARG-EEEIAAVEEELRQLHRRREVIIERAFESDDESTRN 166
BLAST of mRNA_L-elsbetiae_contig631.14954.1 vs. uniprot
Match: A0A835YW93_9STRA (RWP-RK domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW93_9STRA) HSP 1 Score: 77.8 bits (190), Expect = 9.110e-14 Identity = 36/60 (60.00%), Postives = 48/60 (80.00%), Query Frame = 1
Query: 1405 RQTSEDVAARLPLEVLECFYHVPLNIAAQQLTVSLTMLKKLCRAYGVKRWPHRQVSSLDK 1584
RQ+S +V+ R+ L VLE Y++PL AA++L VS TMLKKLCR YG++RWPHRQ+ S+DK
Sbjct: 2 RQSSREVSQRVSLAVLEGCYNIPLTAAAKKLKVSNTMLKKLCRRYGIQRWPHRQIRSIDK 61 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig631.14954.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig631.14954.1 >prot_L-elsbetiae_contig631.14954.1 ID=prot_L-elsbetiae_contig631.14954.1|Name=mRNA_L-elsbetiae_contig631.14954.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=1114bp MASGGSPGTTSQSSPSASGSRLQRGFPSFKLLDDERARAKRFRNRVPSAGback to top mRNA from alignment at L-elsbetiae_contig631:25079..28754+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig631.14954.1 ID=mRNA_L-elsbetiae_contig631.14954.1|Name=mRNA_L-elsbetiae_contig631.14954.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3676bp|location=Sequence derived from alignment at L-elsbetiae_contig631:25079..28754+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig631:25079..28754+ >mRNA_L-elsbetiae_contig631.14954.1 ID=mRNA_L-elsbetiae_contig631.14954.1|Name=mRNA_L-elsbetiae_contig631.14954.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=6684bp|location=Sequence derived from alignment at L-elsbetiae_contig631:25079..28754+ (Laminarionema elsbetiae ELsaHSoW15)back to top |