mRNA_L-elsbetiae_contig6309.14950.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6309.14950.1 vs. uniprot
Match: A0A6H5JZQ5_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ5_9PHAE) HSP 1 Score: 203 bits (517), Expect = 6.160e-61 Identity = 121/237 (51.05%), Postives = 158/237 (66.67%), Query Frame = 1 Query: 61 MVPSDQLRPVTIKTREELSKTLVQSLYSRVWDRGAADHPSPYRDATVLLTPPFSSGKYLEALRLTEADGRFLAADKASLAPTTDEEVTGKLAAAWADIQARAVRAAREDHRRSESRDGAAEAAAAAPAGQPLRKRPRVQSSSQSAATPSTCASFAWGVPSVFASFGRSEDGGSSTEEEGEGLDESDEKKLAAVVAAEIERYQAVLMKPKEMDCLNVLTWWRRTGQKMFPYLAPAAQQ 771 M+ + +LRPVT+KTR+ELSK LV+ L+ RVWD +AD PSP+RDA VLLTPPF++GKYLEALRL+ AD +L+ K LAPT D EVT KL WADI+ RA AARE +RRSES D QPL KR R +SS+ SA S F+ FGR D SST++ + ++S+++KL VVA E+E Y+++ +K E+DC VL WW+RTG+ +FP+LAP AQQ Sbjct: 1 MILASELRPVTVKTRKELSKALVERLFGRVWDDDSAD-PSPFRDAAVLLTPPFNTGKYLEALRLSAADAEYLSIGKKGLAPTMDSEVTAKLDGCWADIKRRAWEAARERNRRSESLDDGV---------QPLHKRFRGESSTSSATRKSR-----------FSLFGRG-DARSSTDDMAD--EDSEDRKLGEVVAGELEHYKSLFIKADELDCREVLPWWKRTGKNIFPHLAPVAQQ 213
BLAST of mRNA_L-elsbetiae_contig6309.14950.1 vs. uniprot
Match: A0A6H5KZ46_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ46_9PHAE) HSP 1 Score: 166 bits (420), Expect = 6.340e-44 Identity = 115/242 (47.52%), Postives = 143/242 (59.09%), Query Frame = 1 Query: 46 ALPFSMVPSDQLRPVTIKTREELSKTLVQSLYSRVWDRGAADHPSPYRDATVLLTPPFSSGKYLEALRLTEADGRFLAADKASLAPTTDEEVTGKLAAAWADIQARAVRAAREDHRRSESRDGAAEAAAAAPAGQPLRKRPRVQSSSQSAATPSTCASFAWGVPSVFASFGRSEDGGSSTEEEGEGLDESDEKKLAAVVAAEIERYQAVLMKPKEMDCLNVLTWWRRTGQKMFPYLAPAAQQ 771 +LP MV LRPV KTRE L+KTLV+ LY RVWD+ +AD PSP+R+A+VLLTP + +L+A LT AD + L KA LAPT D EV KL WADI+ARA AAR+ H A A A GQP KR +TP+T A FAS R+ G TE+ GEG +S++K L V+ E+ER+QA+ M +E+D VL WWR TG+KMFP LAP AQQ Sbjct: 312 SLPHKMVEPAALRPVATKTRELLTKTLVEKLYRRVWDQDSAD-PSPFRNASVLLTPSYKDTNFLQAHALTAADSQHLDQRKAHLAPTIDTEVDQKLNDCWADIKARASEAARKKH----------SARATAEGGQPPLKR---------LSTPATKAR------PRFASLARNRVRG-DTEDVGEG--DSEDKVLMQQVSQELERFQALYMTAEELDTREVLPWWRNTGRKMFPCLAPVAQQ 524
BLAST of mRNA_L-elsbetiae_contig6309.14950.1 vs. uniprot
Match: A0A6H5JJJ9_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJJ9_9PHAE) HSP 1 Score: 121 bits (304), Expect = 1.150e-27 Identity = 88/242 (36.36%), Postives = 119/242 (49.17%), Query Frame = 1 Query: 49 LPFSMVPSDQLRPVTIKTREELSKTLVQSLYSRVWDRGAADHPSPYRDATVLLTPPFSSGKYLEALRLTEADGRFLAADKASLAPTTDEEVTGKLAAAWADIQARAVRAAREDHRRSESRDGAAEA-AAAAPAGQPLRKRPRVQSSSQSAATPSTCASFAWGVPSVFASFGRSEDGGSSTEEEGEGLDESDEKKLAAVVAAEIERYQAVLMKPKEMDCLNVLTWWRRTGQKMFPYLAPAAQQ 771 LPF MVP +QL KTR E+ + LV Y RVWD D P + A LLTPPFS G ++ A++L D +L + + APT DEEVT KL W +I+ RAV A +++ + S GAA A AG R+RP FA+FGRS GG ++G+ +++ VA EI RY+ V M ++ VL++W TG+ FP L AQQ Sbjct: 542 LPFKMVPPEQLHAAVEKTRVEMRRALVSRFYGRVWDENTLDPPF-FCHAACLLTPPFSEGLHVAAMKLAAGDDEYLPSTSTATAPTMDEEVTAKLDETWKEIKERAVEAVKKEQAAASSGPGAAGVFKRARTAGXXXRRRPV--------------------DGDEFAAFGRSV-GGVEESKQGDAVEQE--------VANEIMRYKGVFMTSNDLHPTEVLSYWATTGRHSFPALKHVAQQ 753
BLAST of mRNA_L-elsbetiae_contig6309.14950.1 vs. uniprot
Match: A0A6H5KBZ2_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBZ2_9PHAE) HSP 1 Score: 112 bits (279), Expect = 8.940e-27 Identity = 81/215 (37.67%), Postives = 111/215 (51.63%), Query Frame = 1 Query: 61 MVPSDQLRPVTIKTREELSKTLVQSLYSRVWDRGAADHPSPYRDATVLLTPPFSSGKYLEALRLTEADGRFLAADKASLAPTTDEEVTGKLAAAWADIQARAVRAAREDHRRSESRDGAAEAAAAAPAGQPLRKRPRVQSSSQSAATPSTCASFAWGVPSVFASFGRSEDGGSSTEEEGEGLDESDEKKLAAVVAAEIERYQAVLMKPKEMDCLN 705 MV D L PV K R+EL + LV Y RVWD D PS + D LLTPPFS G YL A++LT +G +L A + +APT+DE+V KL AWA+IQ RAV A ++ R++ G ++ A P KR R + S FA+FGR+E + EE+ +D + V +EI RY+ V M+PK++ N Sbjct: 1 MVAHDDLHPVAQKARQELCRALVTRFYGRVWDESTLD-PSIFADVACLLTPPFSEGNYLSAMKLTVEEGDYLPAGSSVIAPTSDEDVREKLDGAWAEIQKRAVTAVKKAQRQAA---GDSDGGGAGPF-----KRARTNGAGPSRRKNEN-------QDDTFAAFGRNEVAPQTNEED------ADVDLVEEEVVSEIMRYKGVFMRPKDVSTTN 193
BLAST of mRNA_L-elsbetiae_contig6309.14950.1 vs. uniprot
Match: A0A6H5JB08_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB08_9PHAE) HSP 1 Score: 117 bits (293), Expect = 2.530e-26 Identity = 90/241 (37.34%), Postives = 123/241 (51.04%), Query Frame = 1 Query: 49 LPFSMVPSDQLRPVTIKTREELSKTLVQSLYSRVWDRGAADHPSPYRDATVLLTPPFSSGKYLEALRLTEADGRFLAADKASLAPTTDEEVTGKLAAAWADIQARAVRAAREDHRRSESRDGAAEAAAAAPAGQPLRKRPRVQSSSQSAATPSTCASFAWGVPSVFASFGRSEDGGSSTEEEGEGLDESDEKKLAAVVAAEIERYQAVLMKPKEMDCLNVLTWWRRTGQKMFPYLAPAAQQ 771 L MV D+L PV K R++L + LV Y VWD D PS + DA LLTPPFS G YL A++LT + LAA +APT+DE+V KL WA+I+ RAV A + + R G G KR R S A PS ++ F+ FG +E S ++ G +D +E+ V+ EI RY+ V MKP ++ +VL +W + G++MFP L AQQ Sbjct: 298 LRHKMVAHDELHPVAQKARDKLCRALVSRFYGHVWDDSCLD-PSMFCDAACLLTPPFSEGNYLSAMKLTAEEDDNLAAVSTVVAPTSDEDVREKLEGIWAEIKKRAVTAVKTEQNRVAGEGGGQ--------GSDPFKRART-----SGAVPSRRKNY----EDDFSMFGCNEVAPSQSD--GGDVDFVEEE-----VSGEIIRYKGVFMKPIDLPPSDVLAYWNKVGKQMFPSLKYVAQQ 513
BLAST of mRNA_L-elsbetiae_contig6309.14950.1 vs. uniprot
Match: A0A6H5L1G0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1G0_9PHAE) HSP 1 Score: 111 bits (277), Expect = 4.320e-24 Identity = 90/238 (37.82%), Postives = 123/238 (51.68%), Query Frame = 1 Query: 49 LPFSMVPSDQLRPVTIKTREELSKTLVQSLYSRVWDRGAADHPSPYRDATVLLTPPFSSGKYLEALRLTEADGRFLAADKASLAPTTDEEVTGKLAAAWADIQARAVRAAREDHRRSESRDGAAEAAAAAPAGQPLRKRPRVQSSSQSAATPSTCASFAWGVPSV-FASFGRSEDGGSSTEEEGEGLD-ESDEKKLAAVVAAEIERYQAVLMKPKEMDCLNVLTWWRRTGQKMFPYLA 756 LP V LRPV KTRE L K LV+ LY+R+WD +AD PSP+R+A+VLLTP + K+L+ LT D + L +A LAPT D++V KL A+WADI+ RA AAR++H + AA GQP KR +PS G P FAS R + E +G D +S+ L ++ EIERY ++ + +E+ L+ W G K P +A Sbjct: 534 LPHKTVEPAALRPVATKTRELLGKALVEKLYARLWDEESAD-PSPFRNASVLLTPSYKDSKFLDGHALTAGDAQHLGEGRAHLAPTLDDDVQSKLDASWADIRKRASDAARKEHSK----------AATGQDGQPPLKR---------FCSPS-------GAPKPRFASLARHR----ARHESADGSDGDSEINVLMQQMSQEIERYHSLYITAEEVARLS--RTWHIPGFKDIPMIA 738
BLAST of mRNA_L-elsbetiae_contig6309.14950.1 vs. uniprot
Match: A0A6H5JZ66_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ66_9PHAE) HSP 1 Score: 105 bits (262), Expect = 2.140e-22 Identity = 57/122 (46.72%), Postives = 70/122 (57.38%), Query Frame = 1 Query: 49 LPFSMVPSDQLRPVTIKTREELSKTLVQSLYSRVWDRGAADHPSPYRDATVLLTPPFSSGKYLEALRLTEADGRFLAADKASLAPTTDEEVTGKLAAAWADIQARAVRAAREDHRRSESRDG 414 LP MV D+L PV K R EL + LV Y RVWD D PS + DA LLTPPFS G YL A++LT + +LAA +APT+DE+V KL W +I RAV A + H R+ G Sbjct: 289 LPHKMVAHDELHPVAQKARNELCRALVSRFYGRVWDDSCLD-PSMFCDAACLLTPPFSEGNYLSAMKLTAEEDEYLAAGSTVVAPTSDEDVREKLEGIWVEINKRAVTAVKTAHNRAAGEGG 409
BLAST of mRNA_L-elsbetiae_contig6309.14950.1 vs. uniprot
Match: A0A6H5KFQ8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFQ8_9PHAE) HSP 1 Score: 102 bits (255), Expect = 2.410e-21 Identity = 89/242 (36.78%), Postives = 125/242 (51.65%), Query Frame = 1 Query: 49 LPFSMVPSDQLRPVTIKTREELSKTLVQSLYSRVWDRGAADHPSPYRDATVLLTPPFSSGKYLEALRLTEADGRFLAADKASLAPTTDEEVTGKLAAAWADIQARAVRAAREDHRRSE-SRDGAAEAAAAAPAGQPLRKRPRVQSSSQSAATPSTCASFAWGVPSVFASFGRSEDGGSSTEEEGEGLDESDEKKLAAVVAAEIERYQAVLMKPKEMDCLNVLTWWRRTGQKMFPYLAPAAQQ 771 LP MV L P K REEL + LV L+ R W G D PS + D++ LLTPP+SSG ++ A++LTE +G +L L PTTDE+V K A AW I+ RA++A +ED ++ S DG +A P KR R S + SA + FA V + G E GS D+ L+ VA EI+R +A+ M ++ +VL +W+++G+ FP L AQQ Sbjct: 197 LPHKMVAHGNLHPAAKKAREELCRALVARLFGRYW-AGCVD-PS-FVDSSCLLTPPYSSGIHISAMKLTEEEGDYLPTGLTVLTPTTDEDVEDKKAEAWGMIKKRAIQAVKEDQAQANGSGDGGGDAG-------PF-KRART-SGNGSARNDAGEDHFA-----VLCTAGAVEQSGSG-----------DDGDLS--VAGEIQRSRALQMNSSDLQPRDVLNYWKQSGRHAFPALNYVAQQ 408
BLAST of mRNA_L-elsbetiae_contig6309.14950.1 vs. uniprot
Match: A0A6H5K8W6_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8W6_9PHAE) HSP 1 Score: 99.8 bits (247), Expect = 2.880e-20 Identity = 55/122 (45.08%), Postives = 74/122 (60.66%), Query Frame = 1 Query: 46 ALPFSMVPSDQLRPVTIKTREELSKTLVQSLYSRVWDRGAADHPSPYRDATVLLTPPFSSGKYLEALRLTEADGRFLAADKASLAPTTDEEVTGKLAAAWADIQARAVRAAREDHRRSESRD 411 ALP MV +DQL P T REEL + L+ LY RVW+ + +PS + DA LLTPPFS G+++ A+RLT D +L +APT D EVT KL AW +I+ RAV + + + R+ D Sbjct: 219 ALPSKMVSADQLHPTTTLAREELCRALMSRLYERVWNE-QSPNPSFFCDAACLLTPPFSEGRHVSAMRLTAEDAMYLPNSSNIIAPTADFEVTAKLDWAWTEIRKRAVESVKTEQDRAGGSD 339
BLAST of mRNA_L-elsbetiae_contig6309.14950.1 vs. uniprot
Match: A0A6H5JWE7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWE7_9PHAE) HSP 1 Score: 97.8 bits (242), Expect = 5.050e-20 Identity = 55/110 (50.00%), Postives = 63/110 (57.27%), Query Frame = 1 Query: 46 ALPFSMVPSDQLRPVTIKTREELSKTLVQSLYSRVWDRGAADHPSPYRDATVLLTPPFSSGKYLEALRLTEADGRFLAADKASLAPTTDEEVTGKLAAAWADIQARAVRA 375 ALP MV D L PV K R EL + LV Y RVWD D PS DA LLTPPFS G Y+ A++LT + +L A APT DEEV KL AW +I+ RAV A Sbjct: 167 ALPHKMVAHDDLHPVAHKARNELCRALVTRFYGRVWDTSTLD-PSVLCDAPCLLTPPFSEGNYVSAMKLTAEECEYLPAGSCVTAPTLDEEVKEKLDGAWTEIKKRAVAA 275 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6309.14950.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6309.14950.1 >prot_L-elsbetiae_contig6309.14950.1 ID=prot_L-elsbetiae_contig6309.14950.1|Name=mRNA_L-elsbetiae_contig6309.14950.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=257bp ASGAPGGQEVCVGGGALPFSMVPSDQLRPVTIKTREELSKTLVQSLYSRVback to top mRNA from alignment at L-elsbetiae_contig6309:4433..5523+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6309.14950.1 ID=mRNA_L-elsbetiae_contig6309.14950.1|Name=mRNA_L-elsbetiae_contig6309.14950.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1091bp|location=Sequence derived from alignment at L-elsbetiae_contig6309:4433..5523+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6309:4433..5523+ >mRNA_L-elsbetiae_contig6309.14950.1 ID=mRNA_L-elsbetiae_contig6309.14950.1|Name=mRNA_L-elsbetiae_contig6309.14950.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1542bp|location=Sequence derived from alignment at L-elsbetiae_contig6309:4433..5523+ (Laminarionema elsbetiae ELsaHSoW15)back to top |