mRNA_L-elsbetiae_contig6299.14926.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig6299.14926.1
Unique NamemRNA_L-elsbetiae_contig6299.14926.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig6299.14926.1 vs. uniprot
Match: A0A6H5KFQ5_9PHAE (Peptidase A1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KFQ5_9PHAE)

HSP 1 Score: 555 bits (1429), Expect = 7.150e-190
Identity = 284/409 (69.44%), Postives = 328/409 (80.20%), Query Frame = 3
Query:  144 IDMAHLSKR---LSLLVALVSVKHRAGGQAA--------IAVPLRRNSPAAVGAAETLAGDGAWRKRSRRRLADGESEV----RAGAVEIMDCENTEYSGVIGIGTPPQEFEVVLDTGSYNLWVTGAACKGDCDNYSKYESSLSSTYVEDGRIFSQSYEDGSEATGVLSVDTLSIGGLTTTVTFGEMSTRSLDGCSSMDGIMGMGVPNAASEQSVFEDLVEAKVVDVPIFSFYMGNIDTDSPTGVLTLGGVNQTHYEGCLEWIDVAQSGFPDGFWSVVVRNVNVGGNSVLRAPAPAILDTGTSMIVGPFDDVAYLAHQIGALCVSFSGADSSSVEPIDCIDNPRDVELILMECDSDFDDITISFGGDDFTLTASELLQPLADFIPSTVSSSSTVPWCLFGMLGHAEDLW 1325
            +D  HLS     L LL+ L      A   A         + VPLRR SP++   A+  +    WR   RRRLADGE +     +AG VE+MDCENTEYSGV+GIGTPPQEFEVVLDTGSYNLWVTG +C  DCD ++KY+S+LSSTYVEDGR FSQ YEDGSEA+G+LSVDTLSIGGLTTT TFGEMSTRS+DGC++MDGIMGMGVP++  +QSVFEDLVEA VVDVPIFSF+MGNIDT SPTG LTLGGVNQTHYEGCLEW+ VA+S  PDGFWS+V++N+ VG +SVLR+P  AI DTGTSMIVGPF DVAYLA +IGA CV F+G DSSSVE +DC+ NPR+VELILMECDS+FDDI  SFGGDDF LT++ELLQPL DF+PSTVSSSST PWCLFGMLGH E++W
Sbjct:    2 MDRCHLSALSVPLFLLIDLFGATTAAAAPAVPAATRRPPLGVPLRRRSPSSASIAQDRS---LWR---RRRLADGEEDAAQDFQAGVVEVMDCENTEYSGVVGIGTPPQEFEVVLDTGSYNLWVTGVSCTEDCDYFNKYDSALSSTYVEDGRKFSQIYEDGSEASGILSVDTLSIGGLTTTATFGEMSTRSMDGCTTMDGIMGMGVPSS-DKQSVFEDLVEANVVDVPIFSFFMGNIDTGSPTGFLTLGGVNQTHYEGCLEWVAVAESASPDGFWSIVLQNIYVGSSSVLRSPISAIFDTGTSMIVGPFADVAYLAEEIGATCVYFTGVDSSSVETMDCVSNPREVELILMECDSEFDDINFSFGGDDFALTSNELLQPLTDFVPSTVSSSSTEPWCLFGMLGHQENMW 403          
BLAST of mRNA_L-elsbetiae_contig6299.14926.1 vs. uniprot
Match: A0A6H5KFF6_9PHAE (Peptidase A1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFF6_9PHAE)

HSP 1 Score: 323 bits (828), Expect = 6.060e-101
Identity = 192/406 (47.29%), Postives = 258/406 (63.55%), Query Frame = 3
Query:  180 LVALVSVKHRAGGQAAIAVPLRRNSPAAVGAAETLAGDGAWRKRSR------RRLADGESEVRAGAVEIMDCENTEYSGVIGIGTPPQEFEVVLDTGSYNLWVTGAACKGDCDNYSKYESSLSSTYVEDGRIFS-QSYEDGSEATGVLSVDTLSIGGLTTTVTFGEMSTRSLDGCSSMDGIMGMGVPNAASEQSVFEDLVEAKVVDVPIFSFYMGNID-TDSPTGVLTLGGVNQTHYEGCLEWIDVAQS---------GFPDGFWSVVVRNVNVGGNSVLRAPAPAILDTGTSMIVGPFDDVAYLAHQIGALCVSFS----GADSSSVEPIDCIDNPRDVELILMECDSDFDDITISFGGDDFTLTASELLQPLADFIPSTVSSSSTV--PWCLFGMLG-HAEDLW 1325
            +VAL+ V   A   AA+AV +    P+A+    T   + A R R+       RRL +G      G V++ DCEN EY+GVI +GTPPQEF V+    +  LWV    C+        Y++SLSSTY  DG  FS +   D +  TG LS D L++GG++T VTF EM+   L+GC+ +DG MGMG+ N   E + FED+VEA VV +PIFSF++GN+D ++ P GVLTLGGVNQTHYEGCLEW+  + +           P+GFWSV +R++  G  S+L + A AILDTG S+I GPFDDVA +A  IGA+C+ F+     + SSS + I+C+++PR+VELIL+EC +DFDDI   FGGDDF LT +ELLQPL DF     +S+ +V  P C+FGM+G    D W
Sbjct:    1 MVALLRVTAVA---AALAVVVNAAHPSALSVQLTSNKNHAGRGRNMLSAAAGRRLGEGGG---VGTVDVNDCENMEYTGVISLGTPPQEFRVIFSIATSYLWVANTDCEFCGSPSGGYDASLSSTYEADGSPFSIEDAYDYTILTGFLSNDVLTMGGMSTAVTFAEMTEAELEGCTEVDGEMGMGLTND-EETNAFEDMVEAGVVGLPIFSFFLGNMDASEGPHGVLTLGGVNQTHYEGCLEWVATSDALDGTSELPGAVPEGFWSVGLRDIKYGSESMLSSRAAAILDTGASLIQGPFDDVAMIADMIGAMCIKFTEVMEASSSSSADIIECMNDPREVELILVECATDFDDINFFFGGDDFALTETELLQPLTDF-----ASTDSVFDPMCIFGMIGADLTDTW 394          
BLAST of mRNA_L-elsbetiae_contig6299.14926.1 vs. uniprot
Match: A0A6H5JP31_9PHAE (Peptidase A1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JP31_9PHAE)

HSP 1 Score: 163 bits (412), Expect = 4.390e-42
Identity = 109/297 (36.70%), Postives = 158/297 (53.20%), Query Frame = 3
Query:  354 GAVEIMDCENTEYSGVIGIGTPPQEFEVVLDTGSYNLWVTGAACKGDCDNYSKYESSLSSTYVEDGRIFSQSYEDGSEATGVLSVDTLSIGGLTTT-VTFGEMSTRSLDGCS----SMDGIMGMGVPNAASE--QSVFEDLVEAKVVDVPIFSFYMGNIDTDSPTGVLTLGGVNQTHYEGCLEWIDVAQSGFPDGFWSVVVRNVNVGGNSVLRAPAPAILDTGTSMIVGPFDDVAYLAHQIGALCVSFSGADSSSVEPIDCIDNPRDVELILMECDSDFDDITISFGGDDFTLTASE 1223
            G V + D +N +Y G + IGTPPQ FEV+ DTGS NLWV G+ C   C  +S+Y +S SST+ EDGR F  +Y  G   +G LS DT++ GG+     TF E+      G +      DGIMG+     + E   + F  LVE   +D  +F+FY+GN       G L +GG +  HY   + ++ V +     G+W + + NV+V G+SV    + AILD+GTS++VGP +DV  +A ++GA  +SF   +                   LM C SD   +T + GG ++TL   E
Sbjct:   89 GKVIVKDYQNAQYYGQVEIGTPPQSFEVIFDTGSANLWVAGSKCGLSCGLHSRYAASKSSTHAEDGRDFEITYASG-PVSGSLSADTVTWGGIQLKDQTFAEVQDAKGLGLAFILGKFDGIMGLAFDEISVEGVPTPFGRLVEEGELDDAVFAFYLGN----QKEGELIIGGTDPDHYLHEINYVPVTKK----GYWQIDMDNVDVSGSSVTSVKS-AILDSGTSLLVGPKEDVKKIASKVGA--ISFMNGE------------------YLMPCSSDLPPLTFTIGGKEYTLEGDE 355          
BLAST of mRNA_L-elsbetiae_contig6299.14926.1 vs. uniprot
Match: A0A8J9TU14_BRAAE (Hypothetical protein n=1 Tax=Brassicogethes aeneus TaxID=1431903 RepID=A0A8J9TU14_BRAAE)

HSP 1 Score: 156 bits (395), Expect = 8.830e-40
Identity = 122/349 (34.96%), Postives = 168/349 (48.14%), Query Frame = 3
Query:  315 RRRLADGESEVRAGA-VE-IMDCENTEYSGVIGIGTPPQEFEVVLDTGSYNLWVTGAACKGD---CDNYSKYESSLSSTYVEDGRIFSQSYEDGSEATGVLSVDTLSIGGLTTT-VTFGEMSTR--SLDGCSSMDGIMGMGVPNAASEQ--SVFEDLVEAKVVDVPIFSFYMGNIDTDSPTGVLTLGGVNQTHYEGCLEWIDVAQSGFPDGFWSVVVRNVNVGGNS--VLRAPAPAILDTGTSMIVGPFDDVAYLAHQIGALCVSFSGADSSSVEPIDCIDNPRDVELILMECDSDFDDITISFGGDDFTLTASELLQPLADFIPSTVSSSSTVPWCLFGMLGHAEDLW 1325
            R  L +  S++R+G+ VE + +  + +Y G I IGTP Q F V+ DTGS NLWV    C      C  ++KY+S  SSTY  DGR F+  Y  GS A G LS DT++I GLT     F E  T+  S       DGI+GMG  + + ++   VF+++V    VD P+FSFY+     D   G L LGG +  HYEG + W+DV +      +W   V  +++ G S  V       I DTGTS+I GP+ D+  +   IGA  ++FSG        +DC   P            D  +I     G +FTL          D+I        TV    F  L   + LW
Sbjct:   49 REALKERYSKLRSGSGVEPLTNYIDAQYFGEISIGTPAQNFTVIFDTGSSNLWVPSVKCPSSNVACMLHNKYDSDKSSTYKADGRSFAIEYGTGSMA-GFLSTDTITIAGLTAKGQAFAEAITQPGSTFIAGKFDGILGMGYASNSIDEVAPVFDNMVAQGSVDEPVFSFYLNRDSDDELGGELILGGTDPAHYEGEITWVDVTKK----SYWQFTVEGMSIDGQSLSVCNGGCQVIADTGTSLITGPYRDIGQINDAIGAE-LTFSGEAF-----VDCASIP------------DLPNINWVINGKNFTLEGK-------DYIVKIEDEGETVCMSGFQGLDINDGLW 367          
BLAST of mRNA_L-elsbetiae_contig6299.14926.1 vs. uniprot
Match: G3WWG2_SARHA (Cathepsin E n=4 Tax=Metatheria TaxID=9263 RepID=G3WWG2_SARHA)

HSP 1 Score: 156 bits (394), Expect = 1.230e-39
Identity = 96/241 (39.83%), Postives = 140/241 (58.09%), Query Frame = 3
Query:  366 IMDCENTEYSGVIGIGTPPQEFEVVLDTGSYNLWVTGAACKGD-CDNYSKYESSLSSTYVEDGRIFSQSYEDGSEATGVLSVDTLSIGGLTTT-VTFGEMSTR--SLDGCSSMDGIMGMGVPNAA--SEQSVFEDLVEAKVVDVPIFSFYMGNIDTDSPTGV-LTLGGVNQTHYEGCLEWIDVAQSGFPDGFWSVVVRNVNVGGNSVLRAPA-PAILDTGTSMIVGPFDDVAYLAHQIGAL 1064
            +++  + EY GVI IG+PPQ F V+ DTGS NLWV    C    C N++++  S SSTYVE+G  FS  Y  GS  +G++ +D +S+ G+T     FGE  +   S    +  DGI+G+  P+ A      VF++++   +VD+PIFS YM   + DSPTG  L  GG +  H+ G L W+ V +     G+W + + N+ VGG  +  A    AI+DTGTS+I GP D +  L + IGA+
Sbjct:   69 LINYLDMEYYGVISIGSPPQNFTVIFDTGSSNLWVPSVYCVSPACKNHNRFYPSQSSTYVENGNSFSIQYGTGS-LSGIIGMDQVSVEGITVANQQFGESVSEPGSTFVNAEFDGILGLAYPSLAVGGVTPVFDNMIAQNLVDMPIFSVYMTR-NPDSPTGSELVFGGYDHAHFTGSLNWVPVTKQ----GYWQIALDNIQVGGTIMFCAEGCQAIVDTGTSLITGPSDKIKQLQNAIGAV 303          
BLAST of mRNA_L-elsbetiae_contig6299.14926.1 vs. uniprot
Match: A0A8D0DNF9_9SAUR (Cathepsin E n=4 Tax=Salvator merianae TaxID=96440 RepID=A0A8D0DNF9_9SAUR)

HSP 1 Score: 154 bits (388), Expect = 1.370e-38
Identity = 95/242 (39.26%), Postives = 134/242 (55.37%), Query Frame = 3
Query:  366 IMDCENTEYSGVIGIGTPPQEFEVVLDTGSYNLWVTGAACKGD-CDNYSKYESSLSSTYVEDGRIFSQSYEDGSEATGVLSVDTLSIGGLTTTVT-FGEMSTRSLDG--CSSMDGIMGMGVPNAASE--QSVFEDLVEAKVVDVPIFSFYMGNIDTDSPTGVLTLGGVNQTHYEGCLEWIDVAQSGFPDGFWSVVVRNVNVGGNSVLRAPA-PAILDTGTSMIVGPFDDVAYLAHQIGALCV 1070
            +++  + EY G+I IG PPQ F V+ DTGS NLWV    C    C  +S++  S SSTY E G  FS  Y  GS  TG++  D +++ G+T     F E  T        +  DGI+G+G P+ A +    VF++++  K+VD+PIFS YM      S  G LT GG + +H+ G L WI V +     G+W + + NV +GG +   A    AI+DTGTS+I GP +D+  L   IGA  V
Sbjct:   91 LLNYFDVEYFGLISIGNPPQNFTVIFDTGSSNLWVPSVYCSSKACAAHSRFHPSRSSTYEEVGTSFSIQYGTGS-LTGIIGTDQVTVEGITVAKQQFAESVTEPGKTFLVAEFDGILGLGYPSLAVDGITPVFDNMMAQKLVDLPIFSVYMNRNPDSSAGGELTFGGFDHSHFRGNLNWIPVTKQ----GYWQIKLDNVQIGGKTQFCANGCQAIVDTGTSLITGPSEDIEQLQSLIGAKSV 327          
BLAST of mRNA_L-elsbetiae_contig6299.14926.1 vs. uniprot
Match: A0A8C4T1I4_ERPCA (Cathepsin E n=3 Tax=Polypteridae TaxID=8289 RepID=A0A8C4T1I4_ERPCA)

HSP 1 Score: 152 bits (385), Expect = 2.150e-38
Identity = 103/297 (34.68%), Postives = 157/297 (52.86%), Query Frame = 3
Query:  360 VEIMDCENTEYSGVIGIGTPPQEFEVVLDTGSYNLWVTGAACKGD-CDNYSKYESSLSSTYVEDGRIFSQSYEDGSEATGVLSVDTLSIGGLTTTVT-FGEMSTR--SLDGCSSMDGIMGMGVPNAA--SEQSVFEDLVEAKVVDVPIFSFYMGNIDTDSPTGVLTLGGVNQTHYEGCLEWIDVAQSGFPDGFWSVVVRNVNVGGNSVLRAPA-PAILDTGTSMIVGPFDDVAYLAHQIGALCVSFSGADSSSVEPIDCIDNPRDVELILMECDSDFDDITISFGGDDFTLTASELL 1229
            V  MD E   Y+G I IGTPPQ F V+ DTGS NLWV  + C    C+ +++Y S+ S++Y  DGR FS  Y  GS  TG+L +D +++ G++ +   FGE  +   S    ++ DGI+G+G P+ A      VF+ ++   +V +P+FS Y+      S  G +  GG +  H+EG L W+ V Q     G+W ++V N+ V G     +    AI+DTGTS++ GP  D+  + + + A             +P+D  D     ++ L+       DIT    G DFT+T SE+L
Sbjct:   70 VNYMDAE---YAGQISIGTPPQNFTVIFDTGSSNLWVPSSLCTSHACEIHNRYLSTKSTSYQPDGRSFSIQYGTGS-LTGILGIDKVTVQGISVSQQKFGESVSEPGSTFVDANFDGILGLGYPSIAVGGAPPVFDSMMAQGLVALPVFSVYLNRNPDSSSGGEIVFGGFDHNHFEGQLHWVPVTQQ----GYWQILVDNIKVNGVVKFCSDGCQAIVDTGTSLLTGPSGDIKVIQNLLSA-------------QPLDEGDAVECGKIPLLP------DITFQINGVDFTMTPSEIL 339          
BLAST of mRNA_L-elsbetiae_contig6299.14926.1 vs. uniprot
Match: A0A8D0BNU9_9SAUR (Cathepsin E n=1 Tax=Salvator merianae TaxID=96440 RepID=A0A8D0BNU9_9SAUR)

HSP 1 Score: 152 bits (385), Expect = 3.530e-38
Identity = 96/237 (40.51%), Postives = 132/237 (55.70%), Query Frame = 3
Query:  381 NTEYSGVIGIGTPPQEFEVVLDTGSYNLWVTGAACKGD-CDNYSKYESSLSSTYVEDGRIFSQSYEDGSEATGVLSVDTLSIGGLTTTVT-FGEMSTRSLDG--CSSMDGIMGMGVPNAASE--QSVFEDLVEAKVVDVPIFSFYMGNIDTDSPTGVLTLGGVNQTHYEGCLEWIDVAQSGFPDGFWSVVVRNVNVGGNSVLRAPA-PAILDTGTSMIVGPFDDVAYLAHQIGALCV 1070
            N EY G+I IG PPQ F V+ DTGS NLWV    C    C  +S++  S SSTY E G  FS  Y  GS  TG++  D +++ G+T     F E  T        +  DGI+G+G P+ A +    VF++++  K+VD+PIFS YM   +T    G LT GG + +H+ G L WI V +     G+W + + NV +GG +   A    AI+DTGTS+I GP +D+  L   IGA  V
Sbjct:   93 NVEYFGLISIGNPPQNFTVIFDTGSSNLWVPSVYCSSKACAAHSRFHPSRSSTYEEVGTSFSIQYGTGS-LTGIIGTDQVTVEGITVAKQQFAESVTEPGKTFLVAEFDGILGLGYPSLAVDGITPVFDNMMAQKLVDLPIFSVYMNRYETG---GELTFGGFDHSHFRGNLNWIPVTKQ----GYWQIKLDNVQIGGKTQFCANGCQAIVDTGTSLITGPSEDIEQLQSLIGAKSV 321          
BLAST of mRNA_L-elsbetiae_contig6299.14926.1 vs. uniprot
Match: A0A8D0BNI8_9SAUR (Cathepsin E n=1 Tax=Salvator merianae TaxID=96440 RepID=A0A8D0BNI8_9SAUR)

HSP 1 Score: 152 bits (384), Expect = 3.580e-38
Identity = 95/235 (40.43%), Postives = 130/235 (55.32%), Query Frame = 3
Query:  387 EYSGVIGIGTPPQEFEVVLDTGSYNLWVTGAACKGD-CDNYSKYESSLSSTYVEDGRIFSQSYEDGSEATGVLSVDTLSIGGLTTTVT-FGEMSTRSLDG--CSSMDGIMGMGVPNAASE--QSVFEDLVEAKVVDVPIFSFYMGNIDTDSPTGVLTLGGVNQTHYEGCLEWIDVAQSGFPDGFWSVVVRNVNVGGNSVLRAPA-PAILDTGTSMIVGPFDDVAYLAHQIGALCV 1070
            EY G+I IG PPQ F V+ DTGS NLWV    C    C  +S++  S SSTY E G  FS  Y  GS  TG++  D +++ G+T     F E  T        +  DGI+G+G P+ A +    VF++++  K+VD+PIFS YM      S  G LT GG + +H+ G L WI V +     G+W + + NV +GG +   A    AI+DTGTS+I GP +D+  L   IGA  V
Sbjct:   54 EYFGLISIGNPPQNFTVIFDTGSSNLWVPSVYCSSKACAAHSRFHPSRSSTYEEVGTSFSIQYGTGS-LTGIIGTDQVTVEGITVAKQQFAESVTEPGKTFLVAEFDGILGLGYPSLAVDGITPVFDNMMAQKLVDLPIFSVYMNRNPDSSAGGELTFGGFDHSHFRGNLNWIPVTKQ----GYWQIKLDNVQIGGKTQFCANGCQAIVDTGTSLITGPSEDIEQLQSLIGAKSV 283          
BLAST of mRNA_L-elsbetiae_contig6299.14926.1 vs. uniprot
Match: A0A6P7FH60_DIAVI (lysosomal aspartic protease-like n=2 Tax=Diabrotica virgifera virgifera TaxID=50390 RepID=A0A6P7FH60_DIAVI)

HSP 1 Score: 150 bits (380), Expect = 4.630e-38
Identity = 99/303 (32.67%), Postives = 160/303 (52.81%), Query Frame = 3
Query:  354 GAVEIMDCENTEYSGVIGIGTPPQEFEVVLDTGSYNLWVTGAACKGD------CDNYSKYESSLSSTYVEDGRIFSQSYEDGSEATGVLSVDTLSIGGLTTTV-TFGEMSTRSLDGC--SSMDGIMGMGVPNAASEQ--SVFEDLVEAKVVDVPIFSFYMGNIDTDSPTGVLTLGGVNQTHYEGCLEWIDVAQSGFPDGFWSVVVRNVNVGGNSVLRAPAPAILDTGTSMIVGPFDDVAYLAHQIGALCVSFSGADSSSVEPIDCIDNPRDVELILMECDSDFD---DITISFGGDDFTLTAS 1220
            G V +++  + +Y G I IGTPPQ F+V+ DTGS +LWV  A C+ +      C N++KY++  SSTY E+G  F   Y  GS  +G LS D++++ G+     TF E +  +      S+ DGI+G+G P  +S+    VF +++   V+D P+FSFY+     +   G L +GG + + Y G   + +V++      +W   ++ V+VG  S+ R    +++DTGTS+I GP DDV  +   IGA                       D+ +  +ECD+D     ++T +FGG  F ++ S
Sbjct:   49 GVVPLVNEYDLDYYGEISIGTPPQTFKVIFDTGSADLWVPSAQCENNTRTPNGCQNHTKYDADKSSTYQENGHSFYIQYGSGS-LSGFLSEDSVNVAGVAVEKQTFAEATYETAPAFVDSTFDGILGLGYPELSSQSVTPVFTNMINQGVLDAPVFSFYLSQT-ANGDQGELVIGGSDPSKYRGDFTYTEVSKK----LYWQTKLQGVSVGKQSLCRNGCRSVIDTGTSLIYGPNDDVEAINDAIGAFY-------------------DYDLGIYTIECDADLTKLPNVTFTFGGKKFDISPS 326          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6299.14926.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KFQ5_9PHAE7.150e-19069.44Peptidase A1 domain-containing protein n=2 Tax=Ect... [more]
A0A6H5KFF6_9PHAE6.060e-10147.29Peptidase A1 domain-containing protein n=1 Tax=Ect... [more]
A0A6H5JP31_9PHAE4.390e-4236.70Peptidase A1 domain-containing protein n=2 Tax=Ect... [more]
A0A8J9TU14_BRAAE8.830e-4034.96Hypothetical protein n=1 Tax=Brassicogethes aeneus... [more]
G3WWG2_SARHA1.230e-3939.83Cathepsin E n=4 Tax=Metatheria TaxID=9263 RepID=G3... [more]
A0A8D0DNF9_9SAUR1.370e-3839.26Cathepsin E n=4 Tax=Salvator merianae TaxID=96440 ... [more]
A0A8C4T1I4_ERPCA2.150e-3834.68Cathepsin E n=3 Tax=Polypteridae TaxID=8289 RepID=... [more]
A0A8D0BNU9_9SAUR3.530e-3840.51Cathepsin E n=1 Tax=Salvator merianae TaxID=96440 ... [more]
A0A8D0BNI8_9SAUR3.580e-3840.43Cathepsin E n=1 Tax=Salvator merianae TaxID=96440 ... [more]
A0A6P7FH60_DIAVI4.630e-3832.67lysosomal aspartic protease-like n=2 Tax=Diabrotic... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6299contigL-elsbetiae_contig6299:167..9943 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score561.2
Seed ortholog evalue3.8e-157
Seed eggNOG ortholog2880.D7FJG5
KEGG koko:K01378,ko:K01379,ko:K06002,ko:K08245
KEGG Pathwayko04071,ko04140,ko04142,ko04210,ko04915,ko04974,ko05152,map04071,map04140,map04142,map04210,map04915,map04974,map05152
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.aspartic-type endopeptidase activity
EggNOG OGsKOG1339@1,KOG1339@2759
EC3.4.23.1,3.4.23.4,3.4.23.40,3.4.23.5
COG Functional cat.M
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01002,ko04147
Ec32 ortholog descriptionaspartyl protease
Ec32 orthologEc-14_006250.1
Exons7
Model size1328
Cds size1179
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6299.14926.1prot_L-elsbetiae_contig6299.14926.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig6299 167..9794 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816693.427011-CDS-L-elsbetiae_contig6299:166..2801622816693.427011-CDS-L-elsbetiae_contig6299:166..280Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6299 167..280 -
1691683745.0648885-CDS-L-elsbetiae_contig6299:166..2801691683745.0648885-CDS-L-elsbetiae_contig6299:166..280Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6299 167..280 -
1622816693.4376092-CDS-L-elsbetiae_contig6299:718..8261622816693.4376092-CDS-L-elsbetiae_contig6299:718..826Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6299 719..826 -
1691683745.0783265-CDS-L-elsbetiae_contig6299:718..8261691683745.0783265-CDS-L-elsbetiae_contig6299:718..826Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6299 719..826 -
1622816693.4480839-CDS-L-elsbetiae_contig6299:2195..24311622816693.4480839-CDS-L-elsbetiae_contig6299:2195..2431Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6299 2196..2431 -
1691683745.095443-CDS-L-elsbetiae_contig6299:2195..24311691683745.095443-CDS-L-elsbetiae_contig6299:2195..2431Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6299 2196..2431 -
1622816693.4626231-CDS-L-elsbetiae_contig6299:2948..30571622816693.4626231-CDS-L-elsbetiae_contig6299:2948..3057Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6299 2949..3057 -
1691683745.1117752-CDS-L-elsbetiae_contig6299:2948..30571691683745.1117752-CDS-L-elsbetiae_contig6299:2948..3057Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6299 2949..3057 -
1622816693.477189-CDS-L-elsbetiae_contig6299:3799..39661622816693.477189-CDS-L-elsbetiae_contig6299:3799..3966Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6299 3800..3966 -
1691683745.122817-CDS-L-elsbetiae_contig6299:3799..39661691683745.122817-CDS-L-elsbetiae_contig6299:3799..3966Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6299 3800..3966 -
1622816693.488908-CDS-L-elsbetiae_contig6299:4635..47621622816693.488908-CDS-L-elsbetiae_contig6299:4635..4762Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6299 4636..4762 -
1691683745.1351554-CDS-L-elsbetiae_contig6299:4635..47621691683745.1351554-CDS-L-elsbetiae_contig6299:4635..4762Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6299 4636..4762 -
1622816693.5010514-CDS-L-elsbetiae_contig6299:9476..97941622816693.5010514-CDS-L-elsbetiae_contig6299:9476..9794Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6299 9477..9794 -
1691683745.147697-CDS-L-elsbetiae_contig6299:9476..97941691683745.147697-CDS-L-elsbetiae_contig6299:9476..9794Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6299 9477..9794 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816693.5112202-UTR-L-elsbetiae_contig6299:9794..99431622816693.5112202-UTR-L-elsbetiae_contig6299:9794..9943Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6299 9795..9943 -
1691683745.159859-UTR-L-elsbetiae_contig6299:9794..99431691683745.159859-UTR-L-elsbetiae_contig6299:9794..9943Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6299 9795..9943 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig6299.14926.1

>prot_L-elsbetiae_contig6299.14926.1 ID=prot_L-elsbetiae_contig6299.14926.1|Name=mRNA_L-elsbetiae_contig6299.14926.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=393bp
MAHLSKRLSLLVALVSVKHRAGGQAAIAVPLRRNSPAAVGAAETLAGDGA
WRKRSRRRLADGESEVRAGAVEIMDCENTEYSGVIGIGTPPQEFEVVLDT
GSYNLWVTGAACKGDCDNYSKYESSLSSTYVEDGRIFSQSYEDGSEATGV
LSVDTLSIGGLTTTVTFGEMSTRSLDGCSSMDGIMGMGVPNAASEQSVFE
DLVEAKVVDVPIFSFYMGNIDTDSPTGVLTLGGVNQTHYEGCLEWIDVAQ
SGFPDGFWSVVVRNVNVGGNSVLRAPAPAILDTGTSMIVGPFDDVAYLAH
QIGALCVSFSGADSSSVEPIDCIDNPRDVELILMECDSDFDDITISFGGD
DFTLTASELLQPLADFIPSTVSSSSTVPWCLFGMLGHAEDLW*
back to top

mRNA from alignment at L-elsbetiae_contig6299:167..9943-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig6299.14926.1 ID=mRNA_L-elsbetiae_contig6299.14926.1|Name=mRNA_L-elsbetiae_contig6299.14926.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=9777bp|location=Sequence derived from alignment at L-elsbetiae_contig6299:167..9943- (Laminarionema elsbetiae ELsaHSoW15)
GCTGCCGCTTGTTCCGTGTTATGTCCGGCATCTCGCATCTCGCGCACCAG CCACGACACAGTTAGTGTTACATCACAGAAGCCAGTCGGTTTGGTGGCCT CTAACTCTTGTCCATTCGGAGAAAGTCGGGCTGTCAGGGGAACATAGACA TGGCACATCTCAGCAAACGATTGTCCCTTCTTGTTGCCTTGGTGTCGGTC AAACACCGCGCCGGTGGACAGGCTGCCATAGCTGTGCCACTCAGGAGAAA TTCTCCGGCAGCCGTGGGGGCTGCTGAAACGCTAGCGGGGGACGGTGCGT GGAGGAAAAGGAGCAGAAGGAGGCTGGCAGATGGCGAGAGCGAGGTCCGA GCAGGGGCCGTGGAGATCATGGACTGCGAGAACACCGAGTACAGCGGCGT TATCGGGATCGGCACCCCTCCGCAAGAGTTCGAGGTCGTGCTTGACACAG GGAGCTACAACTTGTGGGTAAGACACGCAGGACAAGCTATTGCTTGTGCA CCGCCGTGAATCCCATAAATGTTTAGCCACCTGTGCGTGCGGTGCCTTCC GTTCCTCGTTGCCTCTCGTCGCCCCGAATTGGTCCGCAAGAGGATGCATA GAGGACTAGAGGACCGACCACAAGCTAAACGCACTTGCCAGTCCGCAATG AAGCGTCTACGAGCGCAGCCTCGTCTATGCAGGATGCTACGTCACTCCGC ACATGCGCTCGTTGGCGCGGAACGAGCACCATCGAGTTTTCTAAGAATAC TGGTGGTGTGGTGTCATAGTCTGGAGTGCTGGTGCAAAAAGCAAAAGAGC GTACGACGTGTGGTGGTAGTAGAGGCGCCGGTGCAATAGAGCAGCAGAGC ATTACGACGATAGACCCGAAGAGTGTCTCGTTCTAAAACGCCGTGTCCTG TGGGGCACCAAGGAAGCTAGAGGGGCTGCTGTACGTACTCTTGGCGCAAT AACAGCTTTCGTTGTTTCCTGCCACCATCCCCAAAATACACCACCAGTAA CCAGTAATTAACACCAAACCGAGAGACGCGGGGAACCCGTCTACAGGTAG TAACCGCTCGTAGCTGATTCATCACCAGGTCTTGCCGCCAGCGTTGGCGG CCTGCCTGCCTGCCTGCCTACTACTGTTGCTGCTTCTGTTGCTGCTCCCA CTTCTGTTTCGCTCTCTGAAAGCAGGCGCTTTTTGTCTCTCTCTCGTTTG TGTCAAAAACCCACCCGCAGCGAGCGCATCGCAAAATCTCAGAAAATTCC GCAAGTATCGCGGACGTACAAACAAGCGAAGAGGCTTTTCATCACTTCGC AGTGGGAGCACTTTGTGCACCGCTGGTGATGCTGCTGACATTGCTGATGC TGCTACTGCTGCTTCCTTTGTGCCGCGCTTGAAGTTTTCTTCGCAGTTTT CATGCCACGTTCGTTTAGTTCTGGGCCTTTAGTTCTCCCGTTGCCTCCCG TTAGAAGTGCGGCGCCAGAGGTCAATTAAGTACCGTATCATCGGAGTCTT CACACTGGTGCGAAGACTCCGATATGTGCGGAGACTCCGATACCTGTGCG GAAAGTGAAATTAATAATTGAGTTCTACATAATGACGCACACCCCTGTGC GATGACTCCGATACGTGCGATTCTGAATAAAACCTAAGCGGCGGTGTGGG GTGTTTTGAACGCATATGTACCCCTGCGTCCAAAGACTCCAATCCTAATC AAACCACAGCCGACACGCTATGATTGCAGCGGGACTTGACCGGTGGTAGA GGAGGGGTTTGCTGGTTTGGTTTGGTGACAGGAACGCAGAGTGACAAAGT GCCCACAGGGATGTAGTAAGTACCAATTCCGTAGGTAGAGGCATTTCTAG CTACCCTACCGGCATTTCGTGGAATTATAGGTGGTTCATCGTGTGTTCAT CGTTTGCTTCGTGTGATTGGGGTTGATGTACGCCTTGTTGGATGAGTCTG TGTAGTGTCTGGCAATTTCGATGACAATACTATTAAAATACATAACATGA TCATATTTCCAATTTTCAATTGGTTGGTTCTTTCGGGCCTTTCGTTTGAA GCACTTACCTTTTATTGTGACAAAAAAATTTCAAAAAAATTCAAAATCGC TCAAAAAGTGACTCCCTTTCCCACACGTTATAATCCCTATTGATTTTCGG CTATCTTTCTTAAACTCAAACCAAACGACTATTCCTTGCACGGGCACCTC AACACACGGCAGTAGCTGCTCTGTGCCAAGTGGCAACCTCGATCTCGAAC GTTTCGATCAGATACGGCCGTCGACTTTTGGAGCCAATCCATACTGTAAC CCCTATTAATCTCGGGGATTCTCGTTTTTTGGGGATATTTTTCTCAAAGA TGAAGCAATCGCTTGTTCCTTCCGCAGGCCCCTCAACACACAACCGCAGC TGCTCTCCGCCAAGTCTCGTTGTCAATCTCCAAGTTTGTCATCAGATACG ACCGTCGCATCTTGTCACCTGATGTCTTGTCTACAGCAGTCATGACAATG CACACAACACAGCAGTGCACACCACACTAGACGACCGAACAAGAGATGTG AACACACAGCAGCAGCGCGTCGGTGCTGTTTCCCGTTGTGTCAGCAGCAG AGAGAGGCTGACAGGTAGGTGGGGTTGTCAGGGTTTGCAATAGCAGCTGA CGCTGTGCTGCTCGCGTCGTTTGTTGAATCCTGCTGCATCCCAGGTCTCG TTCTTTGCGTTCCCCACCACCCTCCAACTCCGCAGACGTTCCCACTGCTT CCTACATCATCTGTGTGGTGTGATCGGTGTCGGCTGTCATCTTTGGAGGT GTAGCGTTACTTTGTCTAGAGTAGTCTATTGACTTTGTCTAGAGCAGTCT ACGCTGTCTTTCCAGTGCGCGCGGTCACCGGAGTAAATTTTTTCTGGGTA AGTGTTCAGCTGGGGTTGTACATTATTTCGCACGAAGCACAAAACAACAT ACAAAGAGGCGTTTTTTGCTGCGGATGTTGAGCGTGACTTCTTGACGAAC TCTGCAGCGAGGTTGTACTCAATCTCAAAACGGTTTTTTACATAGTGCTC CAGTGAGCCTCAAGGATTCCTTTCGCCTCTCCATTGGTTTAGTGTCCAAA CAATGTACACCCATACAACAATCAGCGGCAGCAGGTACACCGACATACCT ATAGATACATATACAAATTGATATCTGGGAACTTCTGTTCCGAAATCTGA ATCAGTAGGCTATCGGCCTTCAACATCCCAAAAAAACGTCAGTATGAAGC AGCTGTTTTGAGCATGGCTGCGCATGCCAGGAGACTGGACAGCTATTGTA CCTGATGAGCACAGACCGGTACACCTCTGTTTAGTTCAAGGGAGGAGCGG CAGCACAGAAAACAAGCAGTTGTTTGTTTGTTTCAGTATGCACAGCAGCA GCTGCTTTTTTCAGTTGTAAATTTAGGAGTACTTCTGCTGCCTTCGCCTG TTTGCTTTGGTCTTGCATCACCCCCTCCCGCGGTGCTCTTATGAGCTCGC TCCGAAGGGTGATCTTGTACTCCATATGTATGTACATATATTGTGGGTGC TGTAATGGTATCCGGGTCTGCACGTTCCGCCATTACATCGTTTTGCATGT TTGCCTGCCGTCCAAGTGTTTGCAATAGGCAACGAGGGTTATCAGAGCTG TCCGGACGTTGTCGGGGGTGCCAACGGCCGCCGTGGCTCATGTTGTGTGA CATGCTCTCTCTCTTCTTTCCGTTCGATGGCCATCTGCTTGACATATTTG CTCTTCCTTCTCTGCGCTACCGTACGCTGGCATCTACTTTGCTGCATTTG ATTTTTGCGTCCAACTATTTTACGCTAAGCAACGAGCGTCCCCAGAGGTG TCCGCACACCGTGCCAACTGTGCGTCTGTAGTACATGTTTGCGTCGCGTG CTCTTTTTTACGTTAGTCTTTTACGTGAGTCAACGAGTGTTCTCAGACGT CTGTACGTTGTCGGGAGTGTCAACGGCGGCCGAGGTACATCCATATGTTG GGTGGCATACTATTTCCGTTCGATGACACTCTGTTTTGCTTTTCTGCCTT TCGTCCAAGTTTGTTTGCGCACTCAACACACGATAGTGCAACGAGCGTCT CCAGAGGTGTCCTTACACCGTCGGGAGTGCCAACTGTGCGGCTGTAGTAC ATGTTTGCGTTGCGTGCTCTTTTTTTCTTTCACTGTTATTTCCATCCCAG GGCCATCTGCGTAGTAGGGTCATCTGCGTGGCATGTACGCCTGCCAACCA AGTTTATCATCATACAGAGAGTCTCTAAAGTGGAAAGAAAATTGGTACGC GCAATGCCCCAGGCAGAGCAATCTATAATGATGACCAAAATTCTAAGAGA CGGTAACCGGTAATACCGTACAACGGCCATTTGCTTTTGAGCACCATCAC GGCGCCGAACTACGGTACAGCAGTGAAGCCCACGATACAACCCCCCACAG TACCGCACATGTTTTGGTGCAAACTGGACACCACTCGCCGTATCGCCAAA CCGCACCAAACGTATCGGAGTCTCCGCACTCGAGTGCGGAGACTCCGATA CCTGTGCGATAATACATACAATTAAACCCCTTGGAACCCTATTTTTCATC GCACCCCTGTGCGGAGACTCCGATATGCGCGGAGACTGCGATGATTACGG TTGGCATCTTCACATGCATATTTATATTTTACGTGAAATCTAGCACGCGT CTGCTCTCATCGCCTCCGTGCCTCCCCCCGCCATGAGAGAATTTCCGCAC CAACGAAAACTACAACGCAAAGCAAAAAACTTACCACTTTATACTCTGGC ACTCTCGGGCGTGCTCGTTTAGCACGCAGTGATGCACGGCGTCTCTAACT TTGATCAGCAGAGAGTGGGCATGGCAAAACACCGGCAGCACCTAGGACAA CACCCACGATAACAGCAGATATGTATGGACAGGAAAATGACCGGGGGTTG CCTACAGGGGCGCCGTGCCCATGTTGAATAATGCCGTACCTTCATCCAAT CATCCTTTACATACATACGTTCAGAGATATATCATTGCTCCGTCATGTCG CTGGTTTATCCCTCTCCCTCCGCCCCCCTCTTTATGCCCGAAGCCGCCGC CCACTCTCCCTCGAGAACTGAATAGTAAGCTTTTATGTACAAATAAGAAA CTAACGATGGGAAACGAACTGCCGAATGAAGGTCACGGGCGCGGCTTGTA AGGGGGACTGCGACAACTACAGCAAGTACGAGTCCTCTCTGTCGAGCACG TATGTTGAGGACGGGAGGATTTTCTCGCAGTCTTACGAGGATGGCTCCGA GGCAACAGGTAGGCATGGCAATCGGTGCATGCCAGCAATGCAGTATACCT GCGTTCTTGGGGGGCGATTACACGCCGGTTCACGTAGTGCGTGTTGGGGG GTAGTGTTGCTGTTGAACGTGCTTGGTAGGACGAAGCGCGCGGGGTGCTC TCCCGTGTTTGTGCCTGGAACTATCCAACACAGATTTCTGTTCACTTTTT TCGGGAAGGCATTCACAAATGTTTTTGCAAATGCGGGTCTGGGACGCCCA GTCGACCAGCCAGTCCGGCGATGGAAATTGTGGCTGGAACCATTACAACC GCCACCGCCAATGCCAACGCCAACGCCGACAAAATGTTGGTTTGATGCCA CCGCGATTGGACCGGCCGGCGGGAGCTACATTTTGGCCGACGCAAACCAA CGCGTTGCCGGCGCATGTATCGTGCCCTCAGTATCAATACCTGGCCACGA TGATCGGTCCGAGCAGCGCTTGATCTTGCATTCGGGGTATTGTCTGCGCG ACCCGGTGGCCGCTGTTGTCCAACGTCACCGTCAGCTCCGTGTTCCCCCG CTCCTCTCACCCTGTTTCCCTCCCTCCGGCACTCGCTGTCGTTTCAAACT ACTGTGTTCCGGACTATCGGACGCACGGGACGTGCTTCACTTGCTGCCCC ACGGCCAAACGAAACGCCAACAAAAAGGCGTGCTCTCCGTAGATACCTTG AGCATCGGGGGGCTCACGACGACCGTCACCTTCGGCGAGATGAGCACCCG GTCGCTGGATGGTTGCAGCAGCATGGACGGCATCATGGGCATGGGGGTGC CCAACGCGGCCAGCGAGCAGAGCGTCTTCGAAGACCTCGTGGAGGTGGGG CGAAGGGTGGGGCGATGGCGATTCCGTAAGGGATGACTATGTAGTTGTGC TCATGCGGCTATAGCCTGTTACTCCTGCTACTCCTTATTCTCCTTAGCAT GAAGATCCCCTGCAGGCCTTGATGCAGCTGATGACTGATTCCGTGTCTCA CCGACACTTCTGCGTATTTCTGCGGGGCAACATCTAGAATTAGCGGGATA ACCAGCAACGTGTCCCCGAAGAGAACGTCCGGTGGAGATGAAATACAAGT TAGTGAGGGGGCCGCGCGCGAAGCTCAAGCTTATAGCAGTACGCCGCTAC TGTAACAAGCACGCGAGTGTGTTTCGTTTGTGTGATTTTGTTTTGCGGAC GGGACGCAGTGCTGCTGCTGCTGCTGCTGCTTTAGCGTACTGCTGTATCT CCTAATGTTGTACCGGCGCACCAACGTTGTGATTTGGAAGAAGCTAGCAA GCTCGCCCTGTTTGTTATTTTATGTGCCTCCGCTCGAAATTCGCACCTCT TTACCACACACTTGCTCTGTCGTTCTGCCCCCCCCCCCCCCCCCCCCCCC CCCCCCACCCGAGATCTTATCCCAAAAACTAAAAAGAAGAAAAAAACAAA NNNNNNNNNNTTTTTTTTTTTTTCTCCCCCGCCTCCACTTCCGCCCCCTT TGCCCCCCCCTGCCCTTTTGGTCTGGGCCCCCCCCCCCCCCCCCCGACAC ACACCCTGTTTTGGTGTTGTGCCAACGAACGAGTAGGCAAAGGTCGTCGA CGTGCCTATCTTCTCGTTTTACATGGGCAACATCGACACAGACTCGCCCA CAGGCGTTCTCACGCTGGGAGGCGTGAACCAGACGCACTACGAAGGTAAG GAGCGAGTCACACGAAGTGGTAAAATATTCACCAATCGGTCGGCCGACAC ACAGAACCCTCAAACGTTTTCGATTCGAAAACATTTTCAAAACGCGGATG GATGACAGACACTAAACCTCACTTGTTGGGTTGTACCTTCTGGTGCAGCG TGCCGTAAACCCCCTCCTTGTAGATGGTACATAATAAACAACGGTTCCAA AAACAAACAAAACAAACTGCAGTTCCATGAAACGTTTTTTTTATTTTAAC CTTTAATAGCTCGCTGTGTTTAGACCTCCATCCGCCTAATTATCTGCCCA CCACGTCCCCGCTTGCACGCTACATATGCGTGTGGATGCCTCAAACCCAA CTCGACGTAAAACCATTTTTTTTTCCATGCACGCGTGCGGATGGATGCAC CCATGCCCGAATCAGATTCCAGACCGTTCTTACCGCTGTCGTCTGTCTCT GAATGTCGACGGAACGGCGAAATCGGATCGTGTTGATTTTTCTTCTTTTC CCCGCGAAACAGGCTGTCTCGAGTGGATAGACGTAGCGCAGAGCGGATTT CCGGACGGCTTTTGGTCGGTGGTCGTACGCAACGTCAACGTCGGCGGAAA CTCCGTGCTCCGCGCTCCGGCCCCGGCCATCCTTGACACGGGAACTTCCA TGATTGTCGGGCCGTTCGACGATGTTGCCTACCTGGCACACCAGATCGGC GCGCTGTGCGTCAGTTTCTCTGGGGCGGATTCCAGCAGTGTTGAACCGGT GAGCAGATTTTGGGGGTGCGGTCCGACGGTGGGTCTGCCATGCCATCCAC GTATGTTGTGCTACAGCAGTAGTACATACGCCGTGTTGGCGAGGTTGCGC GCCGGGGTTGGTCGCTGATTTCTCTGGCGTTGCCACGGGCGGTGTCTGAT GTTTGTACATTCGTCGCTGTCTGTATATGTTGGGTTTTGAGGGGTGCGAT CTGCGCTGCTGTTTTTGCACGAACTATCTGCCCCGGTGACAGCCACGGCA TTTGCTCAACAACGCAACGGCGCAGATATGATTGCAGTGATATGTGACAT ATTTTTCAAGGAGGCGCAGAAATGAGCTGTTCTTGATATGTGCTGCCGCT GAGTCCAGCTTTTGTAGTGACGCTGGCTCAGTCCTATAGCTCTGGTATGT CTCGCTCGAGGGTGGAGCACGAAGAACGAAACCAACCGATGCTGTGAGTC GCGGAGTAGAACGATTTAGGGTGACCCACAACAACGGCGGTCTGGGCTTC GCAAACAATATGCGCATACAAGCCCCCCCCCAAAAAAAAACCGCCCTCTT GAGGCACGCTCACACGAGTGCGCCGGCCCTAGGAGATCACATCCTTTATC CCAGACGAAACTGACCACAGGAGATGCGAACTACTGCTCATAGCTAGCGT GGGTGCGGGCGTAAGACCCTGAATCGCTTCGCGAGCATCAAATCAGAGCT GCCTTCGAACACATTTTGAGGGGTTCGGCCAGACCAGCAGCAGCAGAACG CGGCAGCTGTCGTTAGTGCCCTACAATTAGCTACATACCTACTTGCCAGG AGGCGCTTTGCACACATCAGACTCTGCTCTTGCCGATTTGCGTAGTCTCC TCGTGGATTAATCACCTCTGTTTTGGGCCAAAATTGCCGAAAATGGTGCG CGTTGTGTGTACGAACTGGCTCTCTCTTCTATTGCTTCCATACAAAGCTC CCGTAGCGCACTTGAGATGCCCAGAGCTAACGCCCTGCAAATACTGGCGC CTTTATTTTTAGTCTACAATGCACCAAGGTATCTTGTCTACGCATGCCCT CACTCCCAGCCTGGATTAACTCCTCTTCACCGAGCTTTCAACATCTCCGT GTCTCACCAATACTGAAGCTCTGTGATCTGGTCGCACCAGAAATGTGCCT CCTTAAAGTTCACCGGCGTCTGTGCTTCCTTAAAAACGATTTCGCGTATG TTGACTGGGTTGGTTTCTGGCCTTTGTCCTCCTCTCACGCCCTTGTAGAA AAACAGACCCCCTGCTCCGAGCTCACCCCCTGCGCCCGCACCCGCCTTTT TTGCGGTCGCCGTGTCCCCTCGCCCGCCCGGCGGCCTGCCCTGCCTCTCC CACAAATCGCGAGTTAGATCGACTGCATCGACAATCCTCGAGATGTGGAG CTTATTCTCATGGAGTGCGATTCAGATTTCGACGACATCACGATTTCCTT CGGCGGGGACGACTTCACCCTCACGGTGAGAGGAGGTGGCGACGGGCCGC CAATGTAGCGCGCGCTGGATTTCGCTTTTCGGTTCAGCCGATAGAGGAGG AGCCTCACAGGGCTTCCGCCCTCTGCCAGATGGCTCCTTTGGTGCTGAAC TCTGCTGTTGCGGGGTAGGTAACCCTTCCGGTGCTCCCAGAGACAGGTGC TGCGTGCTCCTCTTGCTGCGCTGCCGCGCGCCATGCGTTCGCCTTTTTCA CTGCTTTGGTTGTTCACGAAGTATATCCCACCCTAACGTAAGAAATGGGT CAGCCTGCCCTTCTTTTTGTCTGGTAAGATCTTTGCTGCACGGGCGGCCG TTTTGCTCGCTGCCCAGGGGGCACGCTACCTCGTCCGCTCTCCACCCCCC TCCGTGCTCTCTTCCTTTCGCATTTTCCCATCAATTTGTGTTTGTTTTTG TTTGTCCCCTCAGGCGAGCGAGCTGCTCCAGCCCCTTGCAGATTTCATCC CTTCGACCGTTTCTTCTTCTTCGACAGTCCCGTGGTGCCTCTTTGGGATG CTCGGCCACGCCGAGGACTTGTGGTAA
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig6299:167..9943-

>mRNA_L-elsbetiae_contig6299.14926.1 ID=mRNA_L-elsbetiae_contig6299.14926.1|Name=mRNA_L-elsbetiae_contig6299.14926.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2358bp|location=Sequence derived from alignment at L-elsbetiae_contig6299:167..9943- (Laminarionema elsbetiae ELsaHSoW15)
ATGGCACATCTCAGCAAACGATTGTCCCTTCTTGTTGCCTTGGTGTCGGT
CAAACACCGCGCCGGTGGACAGGCTGCCATAGCTGTGCCACTCAGGAGAA
ATTCTCCGGCAGCCGTGGGGGCTGCTGAAACGCTAGCGGGGGACGGTGCG
TGGAGGAAAAGGAGCAGAAGGAGGCTGGCAGATGGCGAGAGCGAGGTCCG
AGCAGGGGCCGTGGAGATCATGGACTGCGAGAACACCGAGTACAGCGGCG
TTATCGGGATCGGCACCCCTCCGCAAGAGTTCGAGGTCGTGCTTGACACA
GGGAGCTACAACTTGTGGATGGCACATCTCAGCAAACGATTGTCCCTTCT
TGTTGCCTTGGTGTCGGTCAAACACCGCGCCGGTGGACAGGCTGCCATAG
CTGTGCCACTCAGGAGAAATTCTCCGGCAGCCGTGGGGGCTGCTGAAACG
CTAGCGGGGGACGGTGCGTGGAGGAAAAGGAGCAGAAGGAGGCTGGCAGA
TGGCGAGAGCGAGGTCCGAGCAGGGGCCGTGGAGATCATGGACTGCGAGA
ACACCGAGTACAGCGGCGTTATCGGGATCGGCACCCCTCCGCAAGAGTTC
GAGGTCGTGCTTGACACAGGGAGCTACAACTTGTGGGTCACGGGCGCGGC
TTGTAAGGGGGACTGCGACAACTACAGCAAGTACGAGTCCTCTCTGTCGA
GCACGTATGTTGAGGACGGGAGGATTTTCTCGCAGTCTTACGAGGATGGC
TCCGAGGCAACAGGTCACGGGCGCGGCTTGTAAGGGGGACTGCGACAACT
ACAGCAAGTACGAGTCCTCTCTGTCGAGCACGTATGTTGAGGACGGGAGG
ATTTTCTCGCAGTCTTACGAGGATGGCTCCGAGGCAACAGGCGTGCTCTC
CGTAGATACCTTGAGCATCGGGGGGCTCACGACGACCGTCACCTTCGGCG
AGATGAGCACCCGGTCGCTGGATGGTTGCAGCAGCATGGACGGCATCATG
GGCATGGGGGTGCCCAACGCGGCCAGCGAGCAGAGCGTCTTCGAAGACCT
CGTGGAGGCGTGCTCTCCGTAGATACCTTGAGCATCGGGGGGCTCACGAC
GACCGTCACCTTCGGCGAGATGAGCACCCGGTCGCTGGATGGTTGCAGCA
GCATGGACGGCATCATGGGCATGGGGGTGCCCAACGCGGCCAGCGAGCAG
AGCGTCTTCGAAGACCTCGTGGAGGCAAAGGTCGTCGACGTGCCTATCTT
CTCGTTTTACATGGGCAACATCGACACAGACTCGCCCACAGGCGTTCTCA
CGCTGGGAGGCGTGAACCAGACGCACTACGAAGGCAAAGGTCGTCGACGT
GCCTATCTTCTCGTTTTACATGGGCAACATCGACACAGACTCGCCCACAG
GCGTTCTCACGCTGGGAGGCGTGAACCAGACGCACTACGAAGGCTGTCTC
GAGTGGATAGACGTAGCGCAGAGCGGATTTCCGGACGGCTTTTGGTCGGT
GGTCGTACGCAACGTCAACGTCGGCGGAAACTCCGTGCTCCGCGCTCCGG
CCCCGGCCATCCTTGACACGGGAACTTCCATGATTGTCGGGCCGTTCGAC
GATGTTGCCTACCTGGCACACCAGATCGGCGCGCTGTGCGTCAGTTTCTC
TGGGGCGGATTCCAGCAGTGTTGAACCGGCTGTCTCGAGTGGATAGACGT
AGCGCAGAGCGGATTTCCGGACGGCTTTTGGTCGGTGGTCGTACGCAACG
TCAACGTCGGCGGAAACTCCGTGCTCCGCGCTCCGGCCCCGGCCATCCTT
GACACGGGAACTTCCATGATTGTCGGGCCGTTCGACGATGTTGCCTACCT
GGCACACCAGATCGGCGCGCTGTGCGTCAGTTTCTCTGGGGCGGATTCCA
GCAGTGTTGAACCGATCGACTGCATCGACAATCCTCGAGATGTGGAGCTT
ATTCTCATGGAGTGCGATTCAGATTTCGACGACATCACGATTTCCTTCGG
CGGGGACGACTTCACCCTCACGATCGACTGCATCGACAATCCTCGAGATG
TGGAGCTTATTCTCATGGAGTGCGATTCAGATTTCGACGACATCACGATT
TCCTTCGGCGGGGACGACTTCACCCTCACGGCGAGCGAGCTGCTCCAGCC
CCTTGCAGATTTCATCCCTTCGACCGTTTCTTCTTCTTCGACAGTCCCGT
GGTGCCTCTTTGGGATGCTCGGCCACGCCGAGGACTTGTGGTAAGCGAGC
GAGCTGCTCCAGCCCCTTGCAGATTTCATCCCTTCGACCGTTTCTTCTTC
TTCGACAGTCCCGTGGTGCCTCTTTGGGATGCTCGGCCACGCCGAGGACT
TGTGGTAA
back to top