mRNA_L-elsbetiae_contig6292.14919.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6292.14919.1 vs. uniprot
Match: D7FY61_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY61_ECTSI) HSP 1 Score: 160 bits (405), Expect = 3.120e-47 Identity = 80/93 (86.02%), Postives = 87/93 (93.55%), Query Frame = 3 Query: 114 DVPAARNAPGARQTAWVLNGIRTEVVVIPYADRTFVIVTQLKKLGNLVMATSDDAGGMLGGGRGRRYSVQVLLGRRDDPLLSLYARQLLEQMK 392 D+ AARNAPGARQTAW+L+GIRTEVVVIPYADRTFVIVTQ+KKLGNL+MATSD AGGM+ G GRRYSVQVLLGRRDDPLL LYARQ+LEQMK Sbjct: 6 DMSAARNAPGARQTAWMLSGIRTEVVVIPYADRTFVIVTQMKKLGNLLMATSDAAGGMMAGSGGRRYSVQVLLGRRDDPLLCLYARQMLEQMK 98
BLAST of mRNA_L-elsbetiae_contig6292.14919.1 vs. uniprot
Match: A0A7S2B7E1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B7E1_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 1.050e-17 Identity = 41/81 (50.62%), Postives = 62/81 (76.54%), Query Frame = 3 Query: 147 RQTAWVLNGIRTEVVVIPYADRTFVIVTQLKKLGNLVMATSDDAGGMLGGGRGRRYSVQVLLGRRDDPLLSLYARQLLEQM 389 RQTA +++GI T++VV +ADR FV VTQ++K+G ++ A S+D+ +G +R+ + L+GRRDDPLL+LYARQL+EQ+ Sbjct: 17 RQTAAIIDGIHTDIVVQSFADRVFVTVTQIQKIGTMLFAVSEDSS--MGE---KRFDISTLVGRRDDPLLTLYARQLIEQI 92
BLAST of mRNA_L-elsbetiae_contig6292.14919.1 vs. uniprot
Match: A0A835ZGZ8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGZ8_9STRA) HSP 1 Score: 84.0 bits (206), Expect = 1.640e-17 Identity = 45/82 (54.88%), Postives = 62/82 (75.61%), Query Frame = 3 Query: 147 RQTAWVLNGIRTEVVVIPYADRTFVIVTQLKKLGNLVMATSDDAGGMLGGGRGRRYSVQVLLGRRDDPLLSLYARQLLEQMK 392 RQ A L+GI TE+VV ++DRT V VTQL+K+G +++ TS+ +G +GG R ++V+ LLGRRDDPLL +YARQL EQM+ Sbjct: 6 RQGALELHGITTEIVVQSFSDRTMVNVTQLEKMGTMLLVTSEASG--MGG---RSFNVKTLLGRRDDPLLLVYARQLAEQMR 82
BLAST of mRNA_L-elsbetiae_contig6292.14919.1 vs. uniprot
Match: A0A7S2V894_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V894_9STRA) HSP 1 Score: 84.0 bits (206), Expect = 2.840e-17 Identity = 43/100 (43.00%), Postives = 64/100 (64.00%), Query Frame = 3 Query: 102 MDTIDVPAARNAPGARQTAWVLNGIRTEVVVIPYADRTFVIVTQLKKLGNLVMATSDDAGGMLGGGRGRR----YSVQVLLGRRDDPLLSLYARQLLEQM 389 M+ +++ Q+A V+NGI+TE++V+ +AD+ F+IVTQLKK+G LV + +G G R Y VLLGRRDDPLL +YARQ++E++ Sbjct: 1 MEQLNITGGGKTKHHMQSALVINGIKTEILVMYFADKIFIIVTQLKKIGTLVHVQPGNEATSVGASMGDRPLGIYDTSVLLGRRDDPLLLIYARQIMEKI 100
BLAST of mRNA_L-elsbetiae_contig6292.14919.1 vs. uniprot
Match: A0A7S2F3L5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F3L5_9STRA) HSP 1 Score: 81.6 bits (200), Expect = 2.960e-16 Identity = 39/82 (47.56%), Postives = 60/82 (73.17%), Query Frame = 3 Query: 144 ARQTAWVLNGIRTEVVVIPYADRTFVIVTQLKKLGNLVMATSDDAGGMLGGGRGRRYSVQVLLGRRDDPLLSLYARQLLEQM 389 +RQTA +NG+ T+++V + DR FVI+TQ+KK+G LV A +++ +G R ++ VLLGRRDDPL+ +YARQ++EQ+ Sbjct: 35 SRQTAMKINGVHTDIIVQVFQDRIFVIITQIKKIGTLVYAVAEETS--MGS---RTFTANVLLGRRDDPLVLIYARQMIEQI 111
BLAST of mRNA_L-elsbetiae_contig6292.14919.1 vs. uniprot
Match: A0A7S1TQ84_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TQ84_9STRA) HSP 1 Score: 70.9 bits (172), Expect = 3.040e-12 Identity = 40/88 (45.45%), Postives = 53/88 (60.23%), Query Frame = 3 Query: 138 PGARQTAWVLNGIRTEVVVIPYADRTFVIVTQLKKLGNLVMATSDDAGGMLGGGRGRR----YSVQVLLGRRDDPLLSLYARQLLEQM 389 P R+ + GI TE+VV + D FV++TQLKKLG L+M + RGR + +VLLG+RDDPLL LYARQ+ EQ+ Sbjct: 21 PQTRRKVVDIGGIETEIVVQGFQDAIFVVITQLKKLGTLIMTHIE---------RGRTGKCLFDARVLLGKRDDPLLVLYARQIAEQI 99
BLAST of mRNA_L-elsbetiae_contig6292.14919.1 vs. uniprot
Match: A0A4D9CRY9_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CRY9_9STRA) HSP 1 Score: 67.0 bits (162), Expect = 6.480e-11 Identity = 31/73 (42.47%), Postives = 50/73 (68.49%), Query Frame = 3 Query: 165 LNGIRTEVVVIPYADRTFVIVTQLKKLGNLVMATSDDAGGMLGGGRGRRYSVQVLLGRRDDPLLSLYARQLLE 383 +NG+ T+V + ++DR F++++Q + G ++ A +DD+ + G + V VLLGRRDDPLL +YARQL+E Sbjct: 20 INGVLTDVAIFNFSDRIFLVISQNARFGTVISAKADDS--VARPGAAPSFDVSVLLGRRDDPLLLIYARQLVE 90
BLAST of mRNA_L-elsbetiae_contig6292.14919.1 vs. uniprot
Match: W7T248_9STRA (Proteasome assembly chaperone 3 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T248_9STRA) HSP 1 Score: 66.6 bits (161), Expect = 3.120e-10 Identity = 32/73 (43.84%), Postives = 49/73 (67.12%), Query Frame = 3 Query: 165 LNGIRTEVVVIPYADRTFVIVTQLKKLGNLVMATSDDAGGMLGGGRGRRYSVQVLLGRRDDPLLSLYARQLLE 383 +NG+ T+V + ++DR F+ ++Q + G L+ A +DD+ + G + V VLLGRRDDPLL +YARQL+E Sbjct: 80 INGVLTDVAIFNFSDRIFLTISQNARFGTLISAKADDS--VARPGAAPSFDVSVLLGRRDDPLLLIYARQLVE 150
BLAST of mRNA_L-elsbetiae_contig6292.14919.1 vs. uniprot
Match: A0A484DXB7_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DXB7_BRELC) HSP 1 Score: 64.7 bits (156), Expect = 5.070e-10 Identity = 38/74 (51.35%), Postives = 47/74 (63.51%), Query Frame = 3 Query: 165 LNGIRTEVVVIPYADRTFVIVTQLKKLGNLVMATSDDA-GGMLGGGRGRRYSVQVLLGRRDDPLLSLYARQLLE 383 +NGI T V V +ADR F++VTQL LG LV A ++ GG L + + V LGRRDDPLL +YARQ LE Sbjct: 15 INGIPTNVAVSVFADRVFIVVTQLGTLGTLVEAHQKNSLGGKL------QPEIHVRLGRRDDPLLLVYARQFLE 82
BLAST of mRNA_L-elsbetiae_contig6292.14919.1 vs. uniprot
Match: A0A7S3WF90_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3WF90_EMIHU) HSP 1 Score: 65.5 bits (158), Expect = 5.480e-10 Identity = 35/87 (40.23%), Postives = 52/87 (59.77%), Query Frame = 3 Query: 123 AARNAPGARQTAWVLNGIRTEVVVIPYADRTFVIVTQLKKLGNLVMATSDDAGGMLGGGRGRRYSVQVLLGRRDDPLLSLYARQLLE 383 A + P ++ + G+ T ++ YA+R FV+V+Q + LG L+ AT + A G+ G YS +VLLGRRDD L +YAR L+E Sbjct: 41 AQQPGPLSKSAEVCIGGVSTRLIATAYANRIFVVVSQRENLGTLISATRESATGLASGPG--CYSTRVLLGRRDDEALEVYARTLVE 125 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6292.14919.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6292.14919.1 >prot_L-elsbetiae_contig6292.14919.1 ID=prot_L-elsbetiae_contig6292.14919.1|Name=mRNA_L-elsbetiae_contig6292.14919.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=98bp MDTIDVPAARNAPGARQTAWVLNGIRTEVVVIPYADRTFVIVTQLKKLGNback to top mRNA from alignment at L-elsbetiae_contig6292:5432..9250- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6292.14919.1 ID=mRNA_L-elsbetiae_contig6292.14919.1|Name=mRNA_L-elsbetiae_contig6292.14919.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3819bp|location=Sequence derived from alignment at L-elsbetiae_contig6292:5432..9250- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6292:5432..9250- >mRNA_L-elsbetiae_contig6292.14919.1 ID=mRNA_L-elsbetiae_contig6292.14919.1|Name=mRNA_L-elsbetiae_contig6292.14919.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=588bp|location=Sequence derived from alignment at L-elsbetiae_contig6292:5432..9250- (Laminarionema elsbetiae ELsaHSoW15)back to top |