mRNA_L-elsbetiae_contig629.14916.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
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Overview
Homology
BLAST of mRNA_L-elsbetiae_contig629.14916.1 vs. uniprot
Match: D7G6H2_ECTSI (Kinesin motor domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6H2_ECTSI) HSP 1 Score: 815 bits (2106), Expect = 8.720e-259 Identity = 772/1811 (42.63%), Postives = 876/1811 (48.37%), Query Frame = 1
Query: 1 VRARRGTLSAVVRVRSP----QTAEPLELGVRRAGPRCVTVGVPECRGAPRQKETFEVTRVLPLDASPEEIFAAGVGGPVVDWLWDGFNAVVLSYGQACSGKTTLLLGSGSRLPP-PRSSASSAERHGPEDAEAGEAGAG----AEAGGGEGGLLRDILRVIFDNAXXXXXXXXXXXXXXXXXXXXXXXDAIDRPPACCQNEQLLHAAGTS-YDVLNPLAGSWSPSRHACDCAGDDSFAAAAAAETPSASPEPKLRTVATPLGHPPGIEG--------------------GYSGXXXXXXXXXXXXXXXXXGLGAVVALSAWEVAGKSVTDLFVAPXXXXXXXXXXXXXXXXXXXXGTNPETSESTAQSGXXXXXGRRIRSRNGSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGWPTGYPEGFLTVRAPTLAIALELVDAAQRNSG--RRQAAGAPGQPEAGKGGKGXXXXXXXXXXXXXXXXXXAK-GHLFFRVVVYNPLEETVSTLHVVDLAGGWEPPGEKPAGRRGSK--GSGSARPSAVSREWNSFDAMMAGLVPXXXXXXXXXXXXXXRAPAAG-----VERSG-AVDEGGCPSFSRAXXXXXXXXXXXXXXXXXXXXHPVFGSPKGKTFGGGXGGKLVEALQPLMSGNTRTWLVVSVGGDGKGGPATAWRALDVARRVAGVSTTCIRLRGVALADLGLRSPDEVLLTGDDFPRKIGPEDKAAASPWGGGSSSRAVDGRHVRAYLAPSAGGPTEAINASALNAPSATGYDGAGLLSAAAGERLESPGSLGGGGISGFLSSPALSLSGPVGGASLWSLADAPLGEEGAGGGXXXXXXXXREGAGITDIDNFLAGFARACGGDGDDRPRRINSGSALGADLILSQHEEDVAXXXXXXWRAVGAEAAXAGGREGRSDGRCER-----GVAXXXXXXXXXXXXXXXXXXXAPPLQGSPLRPGGRRAAAIVPSTRLLPSKLSRPGAATGSIVVGGGSINPSARGTDYQAA------PPVTTVDGEDRCSSEGAAVDAAGRAAGGSGAASPAASWAKGNIDRMMSSLLEEVLPEKRKEEESPAKAARGRRGGSAGEKSRTGSEGNHCPSASVGGEPIHSAGGIDYASACRSCSPRHHNSYSSSLAPAVNSAHPAPAGHSRSGCSTPDGDXXXXXXXXXXXGFLTPIEVLMHAPSGGGGSCEVCPKCATPRATRSQSLGVNEGLGRPTDAVPATGAAXXXXXXXXXXHPSEQAHCRASAALAAASSRRVADGRVPTSFPKAEDTTAG--GDLNNGAGGR--SRGGVSAAAGQSFGGNFPATAEAEKQPHRSNGTDIGXXXXXXXXXXXXXXXXXXXXAGRAGVYGTIEVGG---EADAADGFGE-LGAETGAGVALMRRSHAALLRVVREQEERGKQMERRLEEKGCDWLERVTTLEAELDGLRAEAVEARGRLRRAENSSPSAEVFERYEAHAGILEAENTSLRDQNIALELRLLDVLRQSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRFRVDGRVARPGR--SAGGGWGGRETSPGGGAPVCAAVLKDLRRRLKEAEAEAQAMRAERAAVDKRDRLCQAQLRALTEHRSRARELLLREKEHEARLTASRLESARAEAVADNKAAEVERLRGQQQASLEADREALVLELAEERRKSRRFDEDRRAYGHIRRFIERHAGGRPAEWEEPVPQGGDGDGEALGLEGLVGGIDGARGERRY 5247
V ARRG LSAVVR+RSP +T EP +L VRR GPR V+V PECR RQKE+FEVTRVL L+A+PEEIFA GVG PVVDWLWDGFNAVVLSYGQA SGKT+LL+G+G+ L P S+ A+ ++E G G+G G E GLL+DILR IFD A DA D CQ +QL G Y+ LNPLAGSWSPSRHA D G D + P AT GI+ G GL AVVALSAWEVAGK VTDLFV P N +S G GR RSRN S GWPTGYPEGFL+VRAP L+ ALELVD AQ RRQ A A + G GKGXXXXXXXXXXXXXXXXXX H+FFRVVVYN LEETVSTLH+VDLAGGWEPP EKPAGRRGSK G GS RPSAVSREWNSFDAMM GLVPXXXXXXX R +G VE+ G A D GG + + HPVFGSPKGKTFGGG GGKLVEAL+PL+SGNTRTWLVVSVGGDGK G AWRALDVARR G+STTCIRLRGVAL DL LRSP EVL D PED+ +AS G + R GR + S T S LN S LLS A G + + + G L +P +SL + G S + GE GG AG + +D+FLAGF R DRPR I+S L AD +L E +G G R G+ R A AP LQGS LRPGGR AA + P +P A T S + + SARG + PP T + R + V A + A SPA S A+ NIDRMMS LLEEVLP++ ++ VG +A ASA R +S+ SSL P P G S D FLTPIEVLM P+GG C + R + G D P + A HP +A A S R+AD PKA D GD N G R S G A + S G + S G G G +EVG E + A F + L G AL+ R HAALLRVVREQE+RGKQM RR E K CDWLERVTTLEA+L+GLRAEAVE RGRLRRAE SSPSAEVFERYEAH GILEAENTSLRDQNI+LELRLLD LRQS+ SRFRVDGRV G AG W P GG P+CAAVLKDLRRRLKEAE EA+ MRAERA +DKRDRLCQAQLR L E RS+ RE LLRE+EHE +LTASRLESARAE +A++KAAEVE L Q A+L A+RE LVL LAEER+KSR+FDEDR AYGHIRRFIERHAGGRPAEW+E V G + +G ++G ER+Y
Sbjct: 5 VDARRGELSAVVRIRSPANSSETTEPPDLCVRRDGPRHVSVEAPECRTTSRQKESFEVTRVLQLNATPEEIFA-GVGSPVVDWLWDGFNAVVLSYGQARSGKTSLLVGNGAPLTETPGESSQRAQSLPKGNSEPGRIGSGRLGKGRRRGDEEGLLKDILRDIFDKAAAAGPA-----------------DAADPVLVACQEKQLSPTTGEPPYETLNPLAGSWSPSRHANDSPGFDVCPGGIGTLLGTQEVTPNGAGTATVHTKRYGIDSERSEGRRDSTEPVATADQIYGSESRNETGKQISRRSITGESGLRAVVALSAWEVAGKHVTDLFVDPSPDSGSTGGSSNGRKNSMG---NSSSSIEVDDKGTRGVAGRS-RSRNRS-----NRNRAAGSDCSRRGGNRGGGSRNSRGRSGSDDSSSTGAGWPTGYPEGFLSVRAPNLSTALELVDVAQSRCSACRRQRATATSEAAKGSRGKGXXXXXXXXXXXXXXXXXXXXXSHVFFRVVVYNTLEETVSTLHIVDLAGGWEPPSEKPAGRRGSKCSGMGSVRPSAVSREWNSFDAMMVGLVPXXXXXXXATAVPPDRVNDSGCNCGHVEKGGIAFDAGGATAVNAEAAASESRPAPPPPA------HPVFGSPKGKTFGGGGGGKLVEALRPLISGNTRTWLVVSVGGDGKCGGGAAWRALDVARRATGISTTCIRLRGVALTDLRLRSPSEVLPVVDGS-HTSNPEDEFSASVSGVSNRRR---GRTRASASTTSVDTVTALTVGSPLNETSRVEQT---LLSTAGGGQNST--TFGYPEPEQVLHAP-ISLVPLLSGLSEGERSLFSFGERTGDGG--------ESSAGSSSVDDFLAGFVRGXXXX-XDRPRLISSSGVLQADDMLENEPEQATPAGQVIAAPLGERGD--GNRSDVVKGKPSRTSKPKAFAASAVRGSLSFSEQRQHDQHAPQLQGSRLRPGGR-AATVGP----------KPSAGTPSTTSFTYNGSGSARGFENDGGEEDDNDPPATLRESRLRNEAFSRKVAAGEPGVIDAEAESPAESRARENIDRMMSLLLEEVLPDRXXXXXXXXXXXXXX---------XXXXXXXXXAASPVGVSRDRTAA----ASATADAVARQSSSFRSSL---PRGPTPPPVGRP----SDDDQSAPAMQSTPDSATFLTPIEVLMRTPAGGASI-----GCKSKR--EEEQRGHCRQCTASDDTTPTSRAETSRRAKEETLHPPGWVQGQAPKVRAVGRSGRMADEHTSMPTPKARDIVGRDTGDANIGRRSRAASSGTGDALSRLSRGNSSGXXXXXXXXXXSSRGLSTGGARQTSTSDRNTDERD-------GGECMKVEVGSARVENNGAHAFEDKLDGMEDEGGALLGRHHAALLRVVREQEDRGKQMIRRFEAKECDWLERVTTLEADLEGLRAEAVETRGRLRRAEESSPSAEVFERYEAHTGILEAENTSLRDQNISLELRLLDTLRQSTTTASSTGRTTVATETNSHLSLSGCQQHRHHAALVSTRATATGEKEGNQDSEICPKQHKPGTGALQQAEASAKACVDGGAT-----SRFRVDGRVPPSGSVGEAGKPW------PSGGTPMCAAVLKDLRRRLKEAELEAKKMRAERAGMDKRDRLCQAQLRTLKEQRSKLREFLLREREHEVKLTASRLESARAEVIAEDKAAEVEHLLDNQ-AALVAEREDLVLALAEERKKSRQFDEDRVAYGHIRRFIERHAGGRPAEWDEEVSVIGHDQVKDVGARRPAENLEGMGKERKY 1704
BLAST of mRNA_L-elsbetiae_contig629.14916.1 vs. uniprot
Match: A0A6H5L684_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L684_9PHAE) HSP 1 Score: 785 bits (2027), Expect = 3.770e-247 Identity = 772/1827 (42.26%), Postives = 881/1827 (48.22%), Query Frame = 1
Query: 55 TAEPLELGVRRAGPRCVTVGVPECRGAPRQKETFEVTRVLPLDASPEEIFAA-------------------------------------GVGGPVVDWLWDGFNAVVLSYGQACSGKTTLLLGSGSRLPP-PRSSASSAE-----RHGPEDAEAGEAGAGAEAGGGEGGLLRDILRVIFDNAXXXXXXXXXXXXXXXXXXXXXXXDAIDRPPACCQNEQLLHAAGTS-YDVLNPLAGSWSPSRHACDCAGDDSFAAAAAAETPSASPEPKLRTVATPLGHPPGIEG--------------------GYSGXXXXXXXXXXXXXXXXXGLGAVVALSAWEVAGKSVTDLFVAPXXXXXXXXXXXXXXXXXXXXGTNPETSESTAQSGXXXXXG----RRIRSRNGSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGWPTGYPEGFLTVRAPTLAIALELVDAAQRNSG--RRQAAGAPGQPEAGKGGKGXXXXXXXXXXXXXXXXXXAK-GHLFFRVVVYNPLEETVSTLHVVDLAGGWEPPGEKPAGRRGSK--GSGSARPSAVSREWNSFDAMMAGLVPXXXXXXXXXXXXXXRAPAAGVERSGAVDEGG--CPSFSRAXXXXXXXXXXXXXXXXXXXXHPVFGSPKGKTFGGGXGGKLVEALQPLMSGNTRTWLVVSVGGDGKGGPATAWRALDVARRVAGVSTTCIRLRGVALADLGLRSPDEVLLTGDDFPRKIGPEDKAAASPWGGGSSSRAVDGRHVRAYLAPSAGGPTEAINASALNAPSATGYDGAGLLSAAAGER-------------LESPGSLGGGGISGFLSSPALS-LSGPVGGASLWSLADAPLGEEGAGGGXXXXXXXXREGAGITDIDNFLAGFARACGGDGDDRPRRINSGSALGADLILSQHEEDVAXXXXXXWRAVGAEAAXAGGREGRSDGRCERG-----VAXXXXXXXXXXXXXXXXXXXAPPLQGSPLRPGGRRAAAIVPSTRLLPSKLSRPGAATGSIVVGGGSINPSARGTDYQAAPPVTTVDGEDRCSSEGAAVDAAGRAAG--GSGAASPAASWAKGNIDRMMSSLLEEVLPEKRKEEE--------------------SPAKAARGRRGGSAGEKSRTGSEGNHCPSASVGGEPIHSAGGIDYASACRSCSPRHHNSYSSSLAPAVNSAHPAPAGHSRSGCSTPDGDXXXXXXXXXXXGFLTPIEVLMHAPSGGGG-SCEVCPKCATPRATRSQSLGVNEGLGRPTDAVPATGAAXXXXXXXXXXHPSEQAHCRASAALAAASSRRVADGRVPTSFPKAED----TTAGGDLNNGAGGRSRGGVSAAAGQSFGGNFPATAEAEKQPHRSNGTDIGXXXXXXXXXXXXXXXXXXXXAGRAGVYGTIEVGGEADAADGF----GELGAETGAGVALMRRSHAALLRVVREQEERGKQMERRLEEKGCDWLERVTTLEAELDGLRAEAVEARGRLRRAENSSPSAEVFERYEAHAGILEAENTSLRDQNIALELRLLDVLRQSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRFRVDGRVARPGR--SAGGGWGGRETSPGGGAPVCAAVLKDLRRRLKEAEAEAQAMRAERAAVDKRDRLCQAQLRALTEHRSRARELLLREKEHEARLTASRLESARAEAVADNKAAEVERLRGQQQASLEADREALVLELAEERRKSRRFDEDRRAYGHIRRFIERHAGGRPAEWEE 5154
T EP +L V+R GPR V++ P+CR PRQKE+FEVTRVLPL+A+PEEIFA GVGGPVVDWLWDGFNAVVLSYGQA SGKT+LL+G G+ L P S+ A+ P +G G G G EG LL+DILR IFD A DA D CQ +QL G Y++ NPLAGSWSPSRHA D G D + P+ AT GI+ G G AVVALSAWEVAGK VTDLFV P G+N +S S R + R+ S XXXXXXX XXXXXXXXXXX GWPTGYPEGFL+VRAP L+ ALELVDAAQ RRQ A A + G GKGXXXXXXXXXXXXXXXXXX H+FFRVVVYN LEET STLH+VDLAGGWEPP EKP GRRGSK G G+ RPSAVSREWNSFDAMM GLVPXXXXXXX R + G +++GG C + RA HPVFGSPKGKTFGGG GGKLVE L+PL+SGNTRTWLVVSVGGDGKGG AWRALDVARR G+STTCIRLRGVAL DL LRS EVL D PED +AS G S+ R V R + + G T S LN PS LLS A G + L +P SLG P+LS LS G SL+S + G GG E AG + +D FLAGF R GGD DDRPR ++SG + AD+ L E A+G R G G+ R A AP LQGS LRPGGR A + PS S GGGS T E R SE + A G + A SPA S A+ NID MMSSLLEEVLP++ SPA +R R +A + + +S+ RS PR S S+A + H APA +TPD FLTPIEVLM P+GGG C+ +T R + G DA P + A HPS H +A A +S + AD R P A D T G ++ + + S G A + S G + S G G G +EVG +G EL G AL+ R HAALLRVVREQE+RGKQM RR E K CDWLERVTTLEA+L GLRAEAVE RGRLRRAE SSPSAEVF+RYEAH GILEAENTSLRD+NI+LELRLLD+LRQS+ SRFRVDG V G AG W GGAP+CAAVLKDLRRRLKEAE EA+ MRAERAAVDKRDRLCQAQLR L E RS+ RE +LRE+E EA+LTASRLESARAE A++KAAEVE L Q A+L A+RE LVL LAEER+KSR+FDEDR AYGHIRRFIERHAGGRPAEW++
Sbjct: 6 TTEPPDLCVQRDGPRHVSIEAPQCRTTPRQKESFEVTRVLPLNATPEEIFAGSDVRPLLLPTEVRFGVPMSLAPNPFTLTSKTNLKQKRGVGGPVVDWLWDGFNAVVLSYGQARSGKTSLLVGKGAPLTETPGESSQRAQCFLNGNSEPVGIGSGRLGKGRRRGDKEG-LLKDILRDIFDKAAAAGPA-----------------DAADPVLVACQEKQLSPTTGEPPYEICNPLAGSWSPSRHANDSPGFDVCPGGIGTLLGTQELTPRGGGTATVQTKVSGIDSQRWEGRRDSAKPVATADRIYGSEIMNETGKQTTRPSLTGESGRIAVVALSAWEVAGKHVTDLFVDPSPDSGSTG------------GSNDGRKDSMGNSSSSIEVNDKGTRGVGGRSRSXXXXXXXXAAGSGCSREGGNRGXXXXXXXXXXXSDDSSSTGA-GWPTGYPEGFLSVRAPNLSTALELVDAAQSRCSACRRQRAIATSEAAKGSRGKGXXXXXXXXXXXXXXXXXXXXXSHVFFRVVVYNTLEETASTLHMVDLAGGWEPPSEKPTGRRGSKCSGMGTVRPSAVSREWNSFDAMMVGLVPXXXXXXXATAVPHNRVNGSDCN-CGHIEKGGIACDA-DRATAVKAAAAASGSRPAPPPTAHPVFGSPKGKTFGGGGGGKLVETLRPLISGNTRTWLVVSVGGDGKGGGGAAWRALDVARRATGISTTCIRLRGVALTDLRLRSSSEVLPVADGCGTS-NPEDDFSASI-NGASNRRRVRTRASTSATSVDIG--TALTVGSPLNEPSRVEQS---LLSTAGGGQNSTTFGSPEPEQVLHAPISLG----------PSLSGLS--EGERSLFSFRE----RTGDGG---------EERAGSSSVDEFLAGFVRG-GGDDDDRPRPMSSGGVVQADVTLENEPEQATPAGQLIAAALGGRGDE--NRSGVEKGKPSRNSKPTAFAASVVQGSLSFGEQRQHYQHAPQLQGSRLRPGGRAATVGPKPSADTPSTTS-------FAYNGGGSPRGFENDGXXXXXXXXXTTLRESRLRSEAFSRKVAAGEPGVENAEAESPAESRARENIDLMMSSLLEEVLPDRXXXXXXXXXXXXXXXXXXXXXXXAASPAGVSRDR-----------------TAAAFATADAV-----ARQSSSSRSPLPR--GPTSPSVARRSDDDHSAPAMQ-----NTPD-----------HATFLTPIEVLMRTPAGGGSIGCK-----STREEKREEKQGHCRQCTASDDATPTSRAETSRRANEESLHPSGWVHGQAPNVRAVGTSGQSADERTSIPTPLAGDFVGRDTGGTNVRHRSRAASSGTGDALSRLSRGSSSXXXXXXXXXXXSSRGLSTGGARQTTDQNPDERD---------GGECMNVEVGSARAEKNGAHALEDELDGMEDEGGALLGRHHAALLRVVREQEDRGKQMIRRFEAKECDWLERVTTLEADLQGLRAEAVETRGRLRRAEESSPSAEVFKRYEAHVGILEAENTSLRDRNISLELRLLDILRQSTAAASSRGGTTLETETNSHLSPSGCHQHQHHAALFSTRATTAGEKEGNKDSEICPKQHKYGTGALQQSDASATACVDGGTT-----SRFRVDGSVPVSGSVGEAGKPW------ASGGAPMCAAVLKDLRRRLKEAELEAKEMRAERAAVDKRDRLCQAQLRTLKEQRSKLREFMLRERELEAKLTASRLESARAEVAAEDKAAEVEHLLDNQ-AALVAEREDLVLALAEERKKSRQFDEDRVAYGHIRRFIERHAGGRPAEWDK 1691
BLAST of mRNA_L-elsbetiae_contig629.14916.1 vs. uniprot
Match: A0A1Y1HRJ0_KLENI (Hypothetical kinesin-like protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HRJ0_KLENI) HSP 1 Score: 61.2 bits (147), Expect = 2.330e-5 Identity = 30/60 (50.00%), Postives = 38/60 (63.33%), Query Frame = 1
Query: 151 TFEVTRVLPLDASPEEIFAAGVGGPVVDWLWDGFNAVVLSYGQACSGKTTLLLGSGSRLP 330
TF T+ P AS + F A VG P++DWLWDGFNA++L YGQ +GK+ L G S P
Sbjct: 92 TFSCTQAFPPGAS-QLGFCAQVGAPIIDWLWDGFNALLLGYGQTGTGKSHSLFGGSSYGP 150 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig629.14916.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig629.14916.1 >prot_L-elsbetiae_contig629.14916.1 ID=prot_L-elsbetiae_contig629.14916.1|Name=mRNA_L-elsbetiae_contig629.14916.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=1749bp VRARRGTLSAVVRVRSPQTAEPLELGVRRAGPRCVTVGVPECRGAPRQKEback to top mRNA from alignment at L-elsbetiae_contig629:14544..26295- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig629.14916.1 ID=mRNA_L-elsbetiae_contig629.14916.1|Name=mRNA_L-elsbetiae_contig629.14916.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=11752bp|location=Sequence derived from alignment at L-elsbetiae_contig629:14544..26295- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig629:14544..26295- >mRNA_L-elsbetiae_contig629.14916.1 ID=mRNA_L-elsbetiae_contig629.14916.1|Name=mRNA_L-elsbetiae_contig629.14916.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=10494bp|location=Sequence derived from alignment at L-elsbetiae_contig629:14544..26295- (Laminarionema elsbetiae ELsaHSoW15)back to top |