mRNA_L-elsbetiae_contig628.14898.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig628.14898.1 vs. uniprot
Match: D8LU87_ECTSI (Methenyltetrahydrofolate cyclohydrolase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LU87_ECTSI) HSP 1 Score: 352 bits (903), Expect = 1.990e-116 Identity = 175/182 (96.15%), Postives = 178/182 (97.80%), Query Frame = 2 Query: 239 MRSKHNTVPGLAVIMVGERRDSAKYVSMKQAVAESIGFESFSSVLPATATHGEVLECIQRHNKDPRCHGILLQLPVPAHLDPRGLLGAIKVEKDVECFNPTNAGRMTAWRRTVIAPCTPLGVMEMLLRLGVEVRGKHAVVLGESSVVGLPMCLLLNEARATVSMVHKETPNPEEFTRRASLV 784 MRSKHNTVPGLAVIMVGERRDSAKYVSMKQAVAESIGF+SFSSVLPATATH +VLECIQ HNKDPRCHGILLQLPVPAHLDPRGLLGAIKVEKDVECFNPTNAGRMTAWRRTVIAPCTPLGVMEMLLRLGVEVRGKHAVVLGESSVVGLPMCLLLNEARATVSMVHKETPNPE FTRRA +V Sbjct: 1 MRSKHNTVPGLAVIMVGERRDSAKYVSMKQAVAESIGFKSFSSVLPATATHRDVLECIQHHNKDPRCHGILLQLPVPAHLDPRGLLGAIKVEKDVECFNPTNAGRMTAWRRTVIAPCTPLGVMEMLLRLGVEVRGKHAVVLGESSVVGLPMCLLLNEARATVSMVHKETPNPEGFTRRADIV 182
BLAST of mRNA_L-elsbetiae_contig628.14898.1 vs. uniprot
Match: A0A835Z9C6_9STRA (Methenyltetrahydrofolate cyclohydrolase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9C6_9STRA) HSP 1 Score: 237 bits (605), Expect = 2.320e-72 Identity = 115/182 (63.19%), Postives = 142/182 (78.02%), Query Frame = 2 Query: 239 MRSKHNTVPGLAVIMVGERRDSAKYVSMKQAVAESIGFESFSSVLPATATHGEVLECIQRHNKDPRCHGILLQLPVPAHLDPRGLLGAIKVEKDVECFNPTNAGRMTAWRRTVIAPCTPLGVMEMLLRLGVEVRGKHAVVLGESSVVGLPMCLLLNEARATVSMVHKETPNPEEFTRRASLV 784 M K VPGLA ++VG+R+DSAKYV MK AVA+ +GF S ++ LPA AT +VL I +N D RCHGILLQLP+P HLD + LLGAI+VEKDVECF+P N GR++ WR TVI+PCTP GVMEML RLGV VRG+ AVV+G+S+VVGLPM L+LN RATVS+VHK+TP P+ + R A +V Sbjct: 1 MGEKRGMVPGLATVLVGDRKDSAKYVGMKHAVAKHVGFLSLATKLPADATMEQVLGAIAAYNADERCHGILLQLPLPPHLDAQALLGAIRVEKDVECFHPLNTGRLSCWRHTVISPCTPRGVMEMLRRLGVPVRGRRAVVIGDSNVVGLPMVLMLNAERATVSIVHKDTPEPQYYVRAADIV 182
BLAST of mRNA_L-elsbetiae_contig628.14898.1 vs. uniprot
Match: A0A7R9Y7W2_MICPS (Methenyltetrahydrofolate cyclohydrolase n=2 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7R9Y7W2_MICPS) HSP 1 Score: 205 bits (521), Expect = 1.210e-61 Identity = 103/212 (48.58%), Postives = 143/212 (67.45%), Query Frame = 2 Query: 152 GSRRARAQLVNGRAMATEILAEVRREVDLMRSKHNTVPGLAVIMVGERRDSAKYVSMKQAVAESIGFESFSSVLPATATHGEVLECIQRHNKDPRCHGILLQLPVPAHLDPRGLLGAIKVEKDVECFNPTNAGRMTA-WRRTVIAPCTPLGVMEMLLRLGVEVRGKHAVVLGESSVVGLPMCLLLNEARATVSMVHKETPNPEEFTRRASLV 784 G R ++A +++G+A+A +I AE++ EV +++ H VPGLAV++VG R DSA YV MK+ + G SF +P TAT EVL+ +Q N DP CHGIL+QLP+P H++ +L AI +EKDV+ F+P N GR++ R + PCTP G +E+L R GV + GK AVV+G S+VVG P LLL ATV++VH +TPN EE RRA +V Sbjct: 2 GGRGSKAAVIDGKAIAADIRAEIKEEVAKLKAAHGRVPGLAVVIVGSRPDSATYVRMKRKACDEAGIRSFHEEVPETATEAEVLKIVQSFNADPDCHGILVQLPLPKHMNEEKILAAISLEKDVDGFHPLNIGRLSQRGREPLFVPCTPRGCIELLERTGVPIAGKEAVVVGRSNVVGTPAALLLQRRDATVTIVHSKTPNSEEIVRRADIV 213
BLAST of mRNA_L-elsbetiae_contig628.14898.1 vs. uniprot
Match: A0A699YJZ3_HAELA (Methenyltetrahydrofolate cyclohydrolase (Fragment) n=1 Tax=Haematococcus lacustris TaxID=44745 RepID=A0A699YJZ3_HAELA) HSP 1 Score: 200 bits (508), Expect = 5.730e-60 Identity = 98/204 (48.04%), Postives = 146/204 (71.57%), Query Frame = 2 Query: 176 LVNGRAMATEILAEVRREVDLMRSKHNTVPGLAVIMVGERRDSAKYVSMKQAVAESIGFESFSSVLPATATHGEVLECIQRHNKDPRCHGILLQLPVPAHLDPRGLLGAIKVEKDVECFNPTNAGRMTA-WRRTVIAPCTPLGVMEMLLRLGVEVRGKHAVVLGESSVVGLPMCLLLNEARATVSMVHKETPNPEEFTRRASLV 784 +++G+A+A +I AE++++V+ +RSK+ VPGLAV++VGER+DS YV MK+ E +G SF S LP +AT EVL+ +Q N +P HGIL+QLP+P H+D +LGAI +EKDV+ F+P N G +T R + APCTPLG +E+L R G+ ++G+ AVV+G S++VG+P+ LLLN+ ATV++ H T + E R+A +V Sbjct: 1 MIDGKAVAAQIRAEIQQQVEELRSKYKRVPGLAVVIVGERKDSQTYVRMKKKACEEVGILSFGSDLPESATQAEVLKVVQDLNSNPDVHGILVQLPLPRHMDEEVVLGAISLEKDVDGFHPLNMGSLTMKGREPLFAPCTPLGCIELLKRCGIPIKGQRAVVVGRSNIVGMPVALLLNKCDATVTVCHSGTKDMEAIVRQADIV 204
BLAST of mRNA_L-elsbetiae_contig628.14898.1 vs. uniprot
Match: A0A8J5ENQ2_ZINOF (Methenyltetrahydrofolate cyclohydrolase n=5 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5ENQ2_ZINOF) HSP 1 Score: 201 bits (511), Expect = 1.340e-59 Identity = 108/238 (45.38%), Postives = 151/238 (63.45%), Query Frame = 2 Query: 74 MMRAHMSTWRQGFRLRACRTLATAAGGSRRARAQLVNGRAMATEILAEVRREVDLMRSKHNTVPGLAVIMVGERRDSAKYVSMKQAVAESIGFESFSSVLPATATHGEVLECIQRHNKDPRCHGILLQLPVPAHLDPRGLLGAIKVEKDVECFNPTNAGRMTAWRR-TVIAPCTPLGVMEMLLRLGVEVRGKHAVVLGESSVVGLPMCLLLNEARATVSMVHKETPNPEEFTRRASLV 784 + R H RQ + TLA G A A++++G+ ++ ++ EV E+ M++ VPGLAVI+VG R+DS YV K+ E++G +SF LP AT EV+E I N D HGIL+QLP+P H++ +LGA+ +EKDV+ F+P N GR+ RR + PCTP G ME+L R GVE++GK AVV+G S++VG+P LLL +A ATVS+VH T NPEE TR+A +V Sbjct: 23 IFRCHPPPSRQPIPSNSVPTLAATDSG---ASAKVIDGKLVSKQVKDEVAEEIATMKAATGHVPGLAVILVGSRKDSQTYVRNKKKACEAVGIKSFEVNLPEDATEEEVIEHISEFNNDSSVHGILVQLPLPRHMNEETILGAVNIEKDVDGFHPLNIGRLAMQRRYPLFVPCTPKGCMELLHRYGVEIKGKRAVVIGRSNIVGMPAALLLQKANATVSIVHSNTKNPEEITRQADIV 257
BLAST of mRNA_L-elsbetiae_contig628.14898.1 vs. uniprot
Match: C1E0E1_MICCC (Methenyltetrahydrofolate cyclohydrolase n=3 Tax=Micromonas TaxID=38832 RepID=C1E0E1_MICCC) HSP 1 Score: 200 bits (508), Expect = 3.030e-59 Identity = 113/237 (47.68%), Postives = 151/237 (63.71%), Query Frame = 2 Query: 92 STWRQGFRLR----ACRTL-ATAAGGSRRARAQLVNGRAMATEILAEVRREVDLMRSKHNTVPGLAVIMVGERRDSAKYVSMKQAVAESIGFESFSSVLPATATHGEVLECIQRHNKDPRCHGILLQLPVPAHLDPRGLLGAIKVEKDVECFNPTNAGRMTA-WRRTVIAPCTPLGVMEMLLRLGVEVRGKHAVVLGESSVVGLPMCLLLNEARATVSMVHKETPNPEEFTRRASLV 784 ST+ RLR A RT A A S RA A+L++G+A+A ++ EVR V M+ K VPGLAV++VGER+DS YV+ K+ G +SF + LP AT EVL+ + +N DP HGIL+QLP+P H+D +LGAI EKDV+ F+P N GR+ R + PCTP G +E+L R G+E+ GK AVV+G S+VVG+P +LL ATV++VH TPN EE RRA +V Sbjct: 13 STFAAPLRLRVTRGALRTAPARALPRSARAEAKLIDGKAIAADVREEVRVGVAQMKEKIGKVPGLAVVLVGERKDSQTYVNAKKKACAEAGIDSFGTDLPGDATEEEVLKVVADYNADPNVHGILVQLPMPDHIDEERVLGAISYEKDVDGFHPLNTGRLAQRGREPLFVPCTPRGCIELLERSGIEIAGKEAVVVGRSNVVGIPAAMLLQRRDATVTIVHSRTPNSEEIVRRADIV 249
BLAST of mRNA_L-elsbetiae_contig628.14898.1 vs. uniprot
Match: A0A090M335_OSTTA (Methenyltetrahydrofolate cyclohydrolase n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A090M335_OSTTA) HSP 1 Score: 199 bits (506), Expect = 1.920e-58 Identity = 101/206 (49.03%), Postives = 137/206 (66.50%), Query Frame = 2 Query: 170 AQLVNGRAMATEILAEVRREVDLMRSKHNTVPGLAVIMVGERRDSAKYVSMKQAVAESIGFESFSSVLPATATHGEVLECIQRHNKDPRCHGILLQLPVPAHLDPRGLLGAIKVEKDVECFNPTNAGRMTA-WRRTVIAPCTPLGVMEMLLRLGVEVRGKHAVVLGESSVVGLPMCLLLNEARATVSMVHKETPNPEEFTRRASLV 784 A +++G+A+A + EVR +V MR++ VPGLAV++VGER+DS YV K+ E G ESF + LP AT EVL ++ +N DP HGIL+QLP+P H++ +LGAI EKDV+ F+P N GR++ R + PCTP G +E+L R G+ + GK AVV+G S+VVG P LLL ATV++VH TPNPEE RRA +V Sbjct: 89 ATIIDGKAIAQAVREEVREKVAAMRTRTGKVPGLAVVLVGERKDSQTYVRSKKKACEEAGIESFGTDLPEDATEDEVLAVVEAYNADPNVHGILVQLPMPKHINEERVLGAISYEKDVDGFHPLNIGRLSQRGREPLFVPCTPRGCIELLERTGIPIAGKEAVVVGRSNVVGTPAALLLQRRDATVTIVHSRTPNPEEICRRADIV 294
BLAST of mRNA_L-elsbetiae_contig628.14898.1 vs. uniprot
Match: I1HWI7_BRADI (Methenyltetrahydrofolate cyclohydrolase n=1 Tax=Brachypodium distachyon TaxID=15368 RepID=I1HWI7_BRADI) HSP 1 Score: 198 bits (504), Expect = 3.530e-58 Identity = 100/206 (48.54%), Postives = 140/206 (67.96%), Query Frame = 2 Query: 170 AQLVNGRAMATEILAEVRREVDLMRSKHNTVPGLAVIMVGERRDSAKYVSMKQAVAESIGFESFSSVLPATATHGEVLECIQRHNKDPRCHGILLQLPVPAHLDPRGLLGAIKVEKDVECFNPTNAGRMTAWRRT-VIAPCTPLGVMEMLLRLGVEVRGKHAVVLGESSVVGLPMCLLLNEARATVSMVHKETPNPEEFTRRASLV 784 A+++NG+ +A +I EVR EV M+ VPGLAVI+VG RRDS YV K+ E++G +S+ LP + EV++ I+ N DP HGIL+QLP+P+H++ +L A+ +EKDV+ F+P N GR+ R PCTP G ME+L R GVE++GK AVV+G S++VG+P LLL +A ATVS+VH +T NPEE TR+A +V Sbjct: 84 AKIINGKLVAEQIREEVRVEVARMKDAIGVVPGLAVILVGSRRDSQTYVRNKKNACEAVGVKSYEVNLPEDCSEDEVIKHIETFNSDPSVHGILVQLPLPSHMNDENILNAVSIEKDVDGFHPLNIGRLAMQGRDPFFVPCTPKGCMELLHRYGVEIKGKRAVVIGRSNIVGMPAALLLQKANATVSIVHSKTKNPEEITRQADIV 289
BLAST of mRNA_L-elsbetiae_contig628.14898.1 vs. uniprot
Match: A9SWW0_PHYPA (Methenyltetrahydrofolate cyclohydrolase n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9SWW0_PHYPA) HSP 1 Score: 199 bits (506), Expect = 3.540e-58 Identity = 99/206 (48.06%), Postives = 136/206 (66.02%), Query Frame = 2 Query: 170 AQLVNGRAMATEILAEVRREVDLMRSKHNTVPGLAVIMVGERRDSAKYVSMKQAVAESIGFESFSSVLPATATHGEVLECIQRHNKDPRCHGILLQLPVPAHLDPRGLLGAIKVEKDVECFNPTNAGRMTAWRRT-VIAPCTPLGVMEMLLRLGVEVRGKHAVVLGESSVVGLPMCLLLNEARATVSMVHKETPNPEEFTRRASLV 784 A +++G A+A EI E+ V+ MRS VPGLAV++VG RRDS YV KQ E +GF S+ LP TAT EVLE +++ N DP HG+L+QLP+P H+ ++GA+ ++KDV+ F+P N GR+ R + CTP G +E+LLR GV++ GKHAVV+G S+VVG+P LLL ATV++VH TPN E TR + +V Sbjct: 109 ANIIDGEAIAQEIKLEIAEVVEKMRSAIGKVPGLAVVLVGSRRDSETYVRRKQRACEKVGFNSYGVSLPETATEEEVLEAVRKFNADPNVHGVLVQLPLPRHICEEKVVGAVSIQKDVDGFHPMNVGRLAMQGRAPLFVSCTPKGCIELLLRSGVQIEGKHAVVIGRSNVVGMPAALLLQRQNATVTVVHSHTPNLAEVTRNSDIV 314
BLAST of mRNA_L-elsbetiae_contig628.14898.1 vs. uniprot
Match: D8TRA0_VOLCA (Methenyltetrahydrofolate cyclohydrolase n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8TRA0_VOLCA) HSP 1 Score: 197 bits (501), Expect = 1.130e-57 Identity = 96/207 (46.38%), Postives = 144/207 (69.57%), Query Frame = 2 Query: 167 RAQLVNGRAMATEILAEVRREVDLMRSKHNTVPGLAVIMVGERRDSAKYVSMKQAVAESIGFESFSSVLPATATHGEVLECIQRHNKDPRCHGILLQLPVPAHLDPRGLLGAIKVEKDVECFNPTNAGRMTA-WRRTVIAPCTPLGVMEMLLRLGVEVRGKHAVVLGESSVVGLPMCLLLNEARATVSMVHKETPNPEEFTRRASLV 784 +A +++G+A+A +I E+ +V +++K+N VPGLAV++VG+R+DS YV MK+ E +G F + LPATAT EVLE ++ N +P HGIL+QLP+P H+D + +LGAI VEKDV+ F+P N GR+ R + APCTP+G ME+L R + ++GK AVV+G S++VG+P LLLN+ ATV++ H T + E R+A ++ Sbjct: 39 KANIIDGKAVAAKIREEIAAKVAELKAKYNRVPGLAVVIVGDRKDSQTYVRMKRKACEEVGIAPFGADLPATATQEEVLEAVRGFNDNPDVHGILVQLPLPKHIDEQAVLGAISVEKDVDGFHPLNIGRLAMKGREPLFAPCTPVGCMELLERCNIPIKGKRAVVVGRSNIVGMPAALLLNKRDATVTICHSATKDMESIVRQADII 245 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig628.14898.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig628.14898.1 >prot_L-elsbetiae_contig628.14898.1 ID=prot_L-elsbetiae_contig628.14898.1|Name=mRNA_L-elsbetiae_contig628.14898.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=237bp MMRAHMSTWRQGFRLRACRTLATAAGGSRRARAQLVNGRAMATEILAEVRback to top mRNA from alignment at L-elsbetiae_contig628:34047..35894+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig628.14898.1 ID=mRNA_L-elsbetiae_contig628.14898.1|Name=mRNA_L-elsbetiae_contig628.14898.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1848bp|location=Sequence derived from alignment at L-elsbetiae_contig628:34047..35894+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig628:34047..35894+ >mRNA_L-elsbetiae_contig628.14898.1 ID=mRNA_L-elsbetiae_contig628.14898.1|Name=mRNA_L-elsbetiae_contig628.14898.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1422bp|location=Sequence derived from alignment at L-elsbetiae_contig628:34047..35894+ (Laminarionema elsbetiae ELsaHSoW15)back to top |