mRNA_L-elsbetiae_contig628.14898.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig628.14898.1
Unique NamemRNA_L-elsbetiae_contig628.14898.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig628.14898.1 vs. uniprot
Match: D8LU87_ECTSI (Methenyltetrahydrofolate cyclohydrolase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LU87_ECTSI)

HSP 1 Score: 352 bits (903), Expect = 1.990e-116
Identity = 175/182 (96.15%), Postives = 178/182 (97.80%), Query Frame = 2
Query:  239 MRSKHNTVPGLAVIMVGERRDSAKYVSMKQAVAESIGFESFSSVLPATATHGEVLECIQRHNKDPRCHGILLQLPVPAHLDPRGLLGAIKVEKDVECFNPTNAGRMTAWRRTVIAPCTPLGVMEMLLRLGVEVRGKHAVVLGESSVVGLPMCLLLNEARATVSMVHKETPNPEEFTRRASLV 784
            MRSKHNTVPGLAVIMVGERRDSAKYVSMKQAVAESIGF+SFSSVLPATATH +VLECIQ HNKDPRCHGILLQLPVPAHLDPRGLLGAIKVEKDVECFNPTNAGRMTAWRRTVIAPCTPLGVMEMLLRLGVEVRGKHAVVLGESSVVGLPMCLLLNEARATVSMVHKETPNPE FTRRA +V
Sbjct:    1 MRSKHNTVPGLAVIMVGERRDSAKYVSMKQAVAESIGFKSFSSVLPATATHRDVLECIQHHNKDPRCHGILLQLPVPAHLDPRGLLGAIKVEKDVECFNPTNAGRMTAWRRTVIAPCTPLGVMEMLLRLGVEVRGKHAVVLGESSVVGLPMCLLLNEARATVSMVHKETPNPEGFTRRADIV 182          
BLAST of mRNA_L-elsbetiae_contig628.14898.1 vs. uniprot
Match: A0A835Z9C6_9STRA (Methenyltetrahydrofolate cyclohydrolase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9C6_9STRA)

HSP 1 Score: 237 bits (605), Expect = 2.320e-72
Identity = 115/182 (63.19%), Postives = 142/182 (78.02%), Query Frame = 2
Query:  239 MRSKHNTVPGLAVIMVGERRDSAKYVSMKQAVAESIGFESFSSVLPATATHGEVLECIQRHNKDPRCHGILLQLPVPAHLDPRGLLGAIKVEKDVECFNPTNAGRMTAWRRTVIAPCTPLGVMEMLLRLGVEVRGKHAVVLGESSVVGLPMCLLLNEARATVSMVHKETPNPEEFTRRASLV 784
            M  K   VPGLA ++VG+R+DSAKYV MK AVA+ +GF S ++ LPA AT  +VL  I  +N D RCHGILLQLP+P HLD + LLGAI+VEKDVECF+P N GR++ WR TVI+PCTP GVMEML RLGV VRG+ AVV+G+S+VVGLPM L+LN  RATVS+VHK+TP P+ + R A +V
Sbjct:    1 MGEKRGMVPGLATVLVGDRKDSAKYVGMKHAVAKHVGFLSLATKLPADATMEQVLGAIAAYNADERCHGILLQLPLPPHLDAQALLGAIRVEKDVECFHPLNTGRLSCWRHTVISPCTPRGVMEMLRRLGVPVRGRRAVVIGDSNVVGLPMVLMLNAERATVSIVHKDTPEPQYYVRAADIV 182          
BLAST of mRNA_L-elsbetiae_contig628.14898.1 vs. uniprot
Match: A0A7R9Y7W2_MICPS (Methenyltetrahydrofolate cyclohydrolase n=2 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7R9Y7W2_MICPS)

HSP 1 Score: 205 bits (521), Expect = 1.210e-61
Identity = 103/212 (48.58%), Postives = 143/212 (67.45%), Query Frame = 2
Query:  152 GSRRARAQLVNGRAMATEILAEVRREVDLMRSKHNTVPGLAVIMVGERRDSAKYVSMKQAVAESIGFESFSSVLPATATHGEVLECIQRHNKDPRCHGILLQLPVPAHLDPRGLLGAIKVEKDVECFNPTNAGRMTA-WRRTVIAPCTPLGVMEMLLRLGVEVRGKHAVVLGESSVVGLPMCLLLNEARATVSMVHKETPNPEEFTRRASLV 784
            G R ++A +++G+A+A +I AE++ EV  +++ H  VPGLAV++VG R DSA YV MK+   +  G  SF   +P TAT  EVL+ +Q  N DP CHGIL+QLP+P H++   +L AI +EKDV+ F+P N GR++   R  +  PCTP G +E+L R GV + GK AVV+G S+VVG P  LLL    ATV++VH +TPN EE  RRA +V
Sbjct:    2 GGRGSKAAVIDGKAIAADIRAEIKEEVAKLKAAHGRVPGLAVVIVGSRPDSATYVRMKRKACDEAGIRSFHEEVPETATEAEVLKIVQSFNADPDCHGILVQLPLPKHMNEEKILAAISLEKDVDGFHPLNIGRLSQRGREPLFVPCTPRGCIELLERTGVPIAGKEAVVVGRSNVVGTPAALLLQRRDATVTIVHSKTPNSEEIVRRADIV 213          
BLAST of mRNA_L-elsbetiae_contig628.14898.1 vs. uniprot
Match: A0A699YJZ3_HAELA (Methenyltetrahydrofolate cyclohydrolase (Fragment) n=1 Tax=Haematococcus lacustris TaxID=44745 RepID=A0A699YJZ3_HAELA)

HSP 1 Score: 200 bits (508), Expect = 5.730e-60
Identity = 98/204 (48.04%), Postives = 146/204 (71.57%), Query Frame = 2
Query:  176 LVNGRAMATEILAEVRREVDLMRSKHNTVPGLAVIMVGERRDSAKYVSMKQAVAESIGFESFSSVLPATATHGEVLECIQRHNKDPRCHGILLQLPVPAHLDPRGLLGAIKVEKDVECFNPTNAGRMTA-WRRTVIAPCTPLGVMEMLLRLGVEVRGKHAVVLGESSVVGLPMCLLLNEARATVSMVHKETPNPEEFTRRASLV 784
            +++G+A+A +I AE++++V+ +RSK+  VPGLAV++VGER+DS  YV MK+   E +G  SF S LP +AT  EVL+ +Q  N +P  HGIL+QLP+P H+D   +LGAI +EKDV+ F+P N G +T   R  + APCTPLG +E+L R G+ ++G+ AVV+G S++VG+P+ LLLN+  ATV++ H  T + E   R+A +V
Sbjct:    1 MIDGKAVAAQIRAEIQQQVEELRSKYKRVPGLAVVIVGERKDSQTYVRMKKKACEEVGILSFGSDLPESATQAEVLKVVQDLNSNPDVHGILVQLPLPRHMDEEVVLGAISLEKDVDGFHPLNMGSLTMKGREPLFAPCTPLGCIELLKRCGIPIKGQRAVVVGRSNIVGMPVALLLNKCDATVTVCHSGTKDMEAIVRQADIV 204          
BLAST of mRNA_L-elsbetiae_contig628.14898.1 vs. uniprot
Match: A0A8J5ENQ2_ZINOF (Methenyltetrahydrofolate cyclohydrolase n=5 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5ENQ2_ZINOF)

HSP 1 Score: 201 bits (511), Expect = 1.340e-59
Identity = 108/238 (45.38%), Postives = 151/238 (63.45%), Query Frame = 2
Query:   74 MMRAHMSTWRQGFRLRACRTLATAAGGSRRARAQLVNGRAMATEILAEVRREVDLMRSKHNTVPGLAVIMVGERRDSAKYVSMKQAVAESIGFESFSSVLPATATHGEVLECIQRHNKDPRCHGILLQLPVPAHLDPRGLLGAIKVEKDVECFNPTNAGRMTAWRR-TVIAPCTPLGVMEMLLRLGVEVRGKHAVVLGESSVVGLPMCLLLNEARATVSMVHKETPNPEEFTRRASLV 784
            + R H    RQ     +  TLA    G   A A++++G+ ++ ++  EV  E+  M++    VPGLAVI+VG R+DS  YV  K+   E++G +SF   LP  AT  EV+E I   N D   HGIL+QLP+P H++   +LGA+ +EKDV+ F+P N GR+   RR  +  PCTP G ME+L R GVE++GK AVV+G S++VG+P  LLL +A ATVS+VH  T NPEE TR+A +V
Sbjct:   23 IFRCHPPPSRQPIPSNSVPTLAATDSG---ASAKVIDGKLVSKQVKDEVAEEIATMKAATGHVPGLAVILVGSRKDSQTYVRNKKKACEAVGIKSFEVNLPEDATEEEVIEHISEFNNDSSVHGILVQLPLPRHMNEETILGAVNIEKDVDGFHPLNIGRLAMQRRYPLFVPCTPKGCMELLHRYGVEIKGKRAVVIGRSNIVGMPAALLLQKANATVSIVHSNTKNPEEITRQADIV 257          
BLAST of mRNA_L-elsbetiae_contig628.14898.1 vs. uniprot
Match: C1E0E1_MICCC (Methenyltetrahydrofolate cyclohydrolase n=3 Tax=Micromonas TaxID=38832 RepID=C1E0E1_MICCC)

HSP 1 Score: 200 bits (508), Expect = 3.030e-59
Identity = 113/237 (47.68%), Postives = 151/237 (63.71%), Query Frame = 2
Query:   92 STWRQGFRLR----ACRTL-ATAAGGSRRARAQLVNGRAMATEILAEVRREVDLMRSKHNTVPGLAVIMVGERRDSAKYVSMKQAVAESIGFESFSSVLPATATHGEVLECIQRHNKDPRCHGILLQLPVPAHLDPRGLLGAIKVEKDVECFNPTNAGRMTA-WRRTVIAPCTPLGVMEMLLRLGVEVRGKHAVVLGESSVVGLPMCLLLNEARATVSMVHKETPNPEEFTRRASLV 784
            ST+    RLR    A RT  A A   S RA A+L++G+A+A ++  EVR  V  M+ K   VPGLAV++VGER+DS  YV+ K+      G +SF + LP  AT  EVL+ +  +N DP  HGIL+QLP+P H+D   +LGAI  EKDV+ F+P N GR+    R  +  PCTP G +E+L R G+E+ GK AVV+G S+VVG+P  +LL    ATV++VH  TPN EE  RRA +V
Sbjct:   13 STFAAPLRLRVTRGALRTAPARALPRSARAEAKLIDGKAIAADVREEVRVGVAQMKEKIGKVPGLAVVLVGERKDSQTYVNAKKKACAEAGIDSFGTDLPGDATEEEVLKVVADYNADPNVHGILVQLPMPDHIDEERVLGAISYEKDVDGFHPLNTGRLAQRGREPLFVPCTPRGCIELLERSGIEIAGKEAVVVGRSNVVGIPAAMLLQRRDATVTIVHSRTPNSEEIVRRADIV 249          
BLAST of mRNA_L-elsbetiae_contig628.14898.1 vs. uniprot
Match: A0A090M335_OSTTA (Methenyltetrahydrofolate cyclohydrolase n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A090M335_OSTTA)

HSP 1 Score: 199 bits (506), Expect = 1.920e-58
Identity = 101/206 (49.03%), Postives = 137/206 (66.50%), Query Frame = 2
Query:  170 AQLVNGRAMATEILAEVRREVDLMRSKHNTVPGLAVIMVGERRDSAKYVSMKQAVAESIGFESFSSVLPATATHGEVLECIQRHNKDPRCHGILLQLPVPAHLDPRGLLGAIKVEKDVECFNPTNAGRMTA-WRRTVIAPCTPLGVMEMLLRLGVEVRGKHAVVLGESSVVGLPMCLLLNEARATVSMVHKETPNPEEFTRRASLV 784
            A +++G+A+A  +  EVR +V  MR++   VPGLAV++VGER+DS  YV  K+   E  G ESF + LP  AT  EVL  ++ +N DP  HGIL+QLP+P H++   +LGAI  EKDV+ F+P N GR++   R  +  PCTP G +E+L R G+ + GK AVV+G S+VVG P  LLL    ATV++VH  TPNPEE  RRA +V
Sbjct:   89 ATIIDGKAIAQAVREEVREKVAAMRTRTGKVPGLAVVLVGERKDSQTYVRSKKKACEEAGIESFGTDLPEDATEDEVLAVVEAYNADPNVHGILVQLPMPKHINEERVLGAISYEKDVDGFHPLNIGRLSQRGREPLFVPCTPRGCIELLERTGIPIAGKEAVVVGRSNVVGTPAALLLQRRDATVTIVHSRTPNPEEICRRADIV 294          
BLAST of mRNA_L-elsbetiae_contig628.14898.1 vs. uniprot
Match: I1HWI7_BRADI (Methenyltetrahydrofolate cyclohydrolase n=1 Tax=Brachypodium distachyon TaxID=15368 RepID=I1HWI7_BRADI)

HSP 1 Score: 198 bits (504), Expect = 3.530e-58
Identity = 100/206 (48.54%), Postives = 140/206 (67.96%), Query Frame = 2
Query:  170 AQLVNGRAMATEILAEVRREVDLMRSKHNTVPGLAVIMVGERRDSAKYVSMKQAVAESIGFESFSSVLPATATHGEVLECIQRHNKDPRCHGILLQLPVPAHLDPRGLLGAIKVEKDVECFNPTNAGRMTAWRRT-VIAPCTPLGVMEMLLRLGVEVRGKHAVVLGESSVVGLPMCLLLNEARATVSMVHKETPNPEEFTRRASLV 784
            A+++NG+ +A +I  EVR EV  M+     VPGLAVI+VG RRDS  YV  K+   E++G +S+   LP   +  EV++ I+  N DP  HGIL+QLP+P+H++   +L A+ +EKDV+ F+P N GR+    R     PCTP G ME+L R GVE++GK AVV+G S++VG+P  LLL +A ATVS+VH +T NPEE TR+A +V
Sbjct:   84 AKIINGKLVAEQIREEVRVEVARMKDAIGVVPGLAVILVGSRRDSQTYVRNKKNACEAVGVKSYEVNLPEDCSEDEVIKHIETFNSDPSVHGILVQLPLPSHMNDENILNAVSIEKDVDGFHPLNIGRLAMQGRDPFFVPCTPKGCMELLHRYGVEIKGKRAVVIGRSNIVGMPAALLLQKANATVSIVHSKTKNPEEITRQADIV 289          
BLAST of mRNA_L-elsbetiae_contig628.14898.1 vs. uniprot
Match: A9SWW0_PHYPA (Methenyltetrahydrofolate cyclohydrolase n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9SWW0_PHYPA)

HSP 1 Score: 199 bits (506), Expect = 3.540e-58
Identity = 99/206 (48.06%), Postives = 136/206 (66.02%), Query Frame = 2
Query:  170 AQLVNGRAMATEILAEVRREVDLMRSKHNTVPGLAVIMVGERRDSAKYVSMKQAVAESIGFESFSSVLPATATHGEVLECIQRHNKDPRCHGILLQLPVPAHLDPRGLLGAIKVEKDVECFNPTNAGRMTAWRRT-VIAPCTPLGVMEMLLRLGVEVRGKHAVVLGESSVVGLPMCLLLNEARATVSMVHKETPNPEEFTRRASLV 784
            A +++G A+A EI  E+   V+ MRS    VPGLAV++VG RRDS  YV  KQ   E +GF S+   LP TAT  EVLE +++ N DP  HG+L+QLP+P H+    ++GA+ ++KDV+ F+P N GR+    R  +   CTP G +E+LLR GV++ GKHAVV+G S+VVG+P  LLL    ATV++VH  TPN  E TR + +V
Sbjct:  109 ANIIDGEAIAQEIKLEIAEVVEKMRSAIGKVPGLAVVLVGSRRDSETYVRRKQRACEKVGFNSYGVSLPETATEEEVLEAVRKFNADPNVHGVLVQLPLPRHICEEKVVGAVSIQKDVDGFHPMNVGRLAMQGRAPLFVSCTPKGCIELLLRSGVQIEGKHAVVIGRSNVVGMPAALLLQRQNATVTVVHSHTPNLAEVTRNSDIV 314          
BLAST of mRNA_L-elsbetiae_contig628.14898.1 vs. uniprot
Match: D8TRA0_VOLCA (Methenyltetrahydrofolate cyclohydrolase n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8TRA0_VOLCA)

HSP 1 Score: 197 bits (501), Expect = 1.130e-57
Identity = 96/207 (46.38%), Postives = 144/207 (69.57%), Query Frame = 2
Query:  167 RAQLVNGRAMATEILAEVRREVDLMRSKHNTVPGLAVIMVGERRDSAKYVSMKQAVAESIGFESFSSVLPATATHGEVLECIQRHNKDPRCHGILLQLPVPAHLDPRGLLGAIKVEKDVECFNPTNAGRMTA-WRRTVIAPCTPLGVMEMLLRLGVEVRGKHAVVLGESSVVGLPMCLLLNEARATVSMVHKETPNPEEFTRRASLV 784
            +A +++G+A+A +I  E+  +V  +++K+N VPGLAV++VG+R+DS  YV MK+   E +G   F + LPATAT  EVLE ++  N +P  HGIL+QLP+P H+D + +LGAI VEKDV+ F+P N GR+    R  + APCTP+G ME+L R  + ++GK AVV+G S++VG+P  LLLN+  ATV++ H  T + E   R+A ++
Sbjct:   39 KANIIDGKAVAAKIREEIAAKVAELKAKYNRVPGLAVVIVGDRKDSQTYVRMKRKACEEVGIAPFGADLPATATQEEVLEAVRGFNDNPDVHGILVQLPLPKHIDEQAVLGAISVEKDVDGFHPLNIGRLAMKGREPLFAPCTPVGCMELLERCNIPIKGKRAVVVGRSNIVGMPAALLLNKRDATVTICHSATKDMESIVRQADII 245          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig628.14898.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LU87_ECTSI1.990e-11696.15Methenyltetrahydrofolate cyclohydrolase n=2 Tax=Ec... [more]
A0A835Z9C6_9STRA2.320e-7263.19Methenyltetrahydrofolate cyclohydrolase n=1 Tax=Tr... [more]
A0A7R9Y7W2_MICPS1.210e-6148.58Methenyltetrahydrofolate cyclohydrolase n=2 Tax=Mi... [more]
A0A699YJZ3_HAELA5.730e-6048.04Methenyltetrahydrofolate cyclohydrolase (Fragment)... [more]
A0A8J5ENQ2_ZINOF1.340e-5945.38Methenyltetrahydrofolate cyclohydrolase n=5 Tax=Zi... [more]
C1E0E1_MICCC3.030e-5947.68Methenyltetrahydrofolate cyclohydrolase n=3 Tax=Mi... [more]
A0A090M335_OSTTA1.920e-5849.03Methenyltetrahydrofolate cyclohydrolase n=2 Tax=Os... [more]
I1HWI7_BRADI3.530e-5848.54Methenyltetrahydrofolate cyclohydrolase n=1 Tax=Br... [more]
A9SWW0_PHYPA3.540e-5848.06Methenyltetrahydrofolate cyclohydrolase n=1 Tax=Ph... [more]
D8TRA0_VOLCA1.130e-5746.38Methenyltetrahydrofolate cyclohydrolase n=1 Tax=Vo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig628contigL-elsbetiae_contig628:34047..35894 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score353.2
Seed ortholog evalue9.4e-95
Seed eggNOG ortholog2880.D8LU87
KEGG rclassRC00026,RC00111,RC00202,RC00578
KEGG koko:K00288
KEGG ReactionR00943,R01220,R01655
KEGG Pathwayko00670,ko01100,map00670,map01100
KEGG ModuleM00141
Hectar predicted targeting categorymitochondrion
GOsGO:0003674,GO:0003824,GO:0004477,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006730,GO:0008150,GO:0008152,GO:0009507,GO:0009536,GO:0009987,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0019238,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0055114
EggNOG free text desc.methenyltetrahydrofolate cyclohydrolase activity
EggNOG OGsCOG0190@1,KOG0089@2759
EC1.5.1.5,3.5.4.9,6.3.4.3
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko04147
Ec32 ortholog descriptionTetrahydrofolate dehydrogenase/cyclohydrolase
Ec32 orthologEc-14_004070.1
Exons4
Model size784
Cds size711
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig628.14898.1prot_L-elsbetiae_contig628.14898.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig628 34120..35894 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816690.7303832-UTR-L-elsbetiae_contig628:34046..341191622816690.7303832-UTR-L-elsbetiae_contig628:34046..34119Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig628 34047..34119 +
1691683743.014586-UTR-L-elsbetiae_contig628:34046..341191691683743.014586-UTR-L-elsbetiae_contig628:34046..34119Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig628 34047..34119 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816690.7410004-CDS-L-elsbetiae_contig628:34119..342631622816690.7410004-CDS-L-elsbetiae_contig628:34119..34263Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig628 34120..34263 +
1691683743.0279076-CDS-L-elsbetiae_contig628:34119..342631691683743.0279076-CDS-L-elsbetiae_contig628:34119..34263Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig628 34120..34263 +
1622816690.7512827-CDS-L-elsbetiae_contig628:34553..346641622816690.7512827-CDS-L-elsbetiae_contig628:34553..34664Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig628 34554..34664 +
1691683743.0383239-CDS-L-elsbetiae_contig628:34553..346641691683743.0383239-CDS-L-elsbetiae_contig628:34553..34664Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig628 34554..34664 +
1622816690.76223-CDS-L-elsbetiae_contig628:35018..351251622816690.76223-CDS-L-elsbetiae_contig628:35018..35125Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig628 35019..35125 +
1691683743.053552-CDS-L-elsbetiae_contig628:35018..351251691683743.053552-CDS-L-elsbetiae_contig628:35018..35125Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig628 35019..35125 +
1622816690.7720885-CDS-L-elsbetiae_contig628:35545..358941622816690.7720885-CDS-L-elsbetiae_contig628:35545..35894Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig628 35546..35894 +
1691683743.066318-CDS-L-elsbetiae_contig628:35545..358941691683743.066318-CDS-L-elsbetiae_contig628:35545..35894Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig628 35546..35894 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig628.14898.1

>prot_L-elsbetiae_contig628.14898.1 ID=prot_L-elsbetiae_contig628.14898.1|Name=mRNA_L-elsbetiae_contig628.14898.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=237bp
MMRAHMSTWRQGFRLRACRTLATAAGGSRRARAQLVNGRAMATEILAEVR
REVDLMRSKHNTVPGLAVIMVGERRDSAKYVSMKQAVAESIGFESFSSVL
PATATHGEVLECIQRHNKDPRCHGILLQLPVPAHLDPRGLLGAIKVEKDV
ECFNPTNAGRMTAWRRTVIAPCTPLGVMEMLLRLGVEVRGKHAVVLGESS
VVGLPMCLLLNEARATVSMVHKETPNPEEFTRRASLV
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mRNA from alignment at L-elsbetiae_contig628:34047..35894+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig628.14898.1 ID=mRNA_L-elsbetiae_contig628.14898.1|Name=mRNA_L-elsbetiae_contig628.14898.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1848bp|location=Sequence derived from alignment at L-elsbetiae_contig628:34047..35894+ (Laminarionema elsbetiae ELsaHSoW15)
ACAACGAATCCAGCACAGCAGGCCTTGTGGACGCGTAGCCTTCATCTTGT GCAGTGCGTAGGTTCCGGCGGCCATGATGAGGGCTCACATGTCTACGTGG AGACAGGGTTTCCGTCTACGAGCATGTCGGACACTAGCAACGGCAGCCGG GGGCTCAAGGCGGGCCCGAGCACAGCTGGTGAACGGGAGGGCCATGGCAA CGGAAATACTGGCTGAGGTGAGAAGGTTTACAGCAGTACAGCCGAGGTGC GCCAGAGCTTGTCCATATGCATAGAAGCTGTCAGCGTCGTAAACTATGTA CTGCACATAACGAGTGCCACGCTCCACCACCAAGGTGCACCCGAGAGAGT CGCAACGCCATGCACAACAGGTGCATTTCTAGCGCGCTCGCTCCTGCTGG CTGCGTTGAGGGGGCGTCTGTCATGCTGCTTTGGCCTAACTCAGTTGGTT TTCCGTCGGCATCCATGCTTTTTTTCGTGCTTTGGAATTGGCCCGACGCG CGTACAGGTGCGGCGAGAAGTGGATTTGATGAGATCGAAGCATAACACGG TGCCCGGGTTGGCCGTGATCATGGTGGGCGAGAGACGTGATAGCGCCAAG TATGTGTCGATGAAACAGGTGAGAGCTCAATCAAGCGCGGAAGGCAAGCA ACCAGACTGCCATACACTTCCTCGCGAACGTCAGCAAGCCCTTCGTATAT AAGTCGACAGCATTTGGTGTTTCCAGCAAGTTTGTGTCCCTTCGTTTCGA TACTGGGAATCTCCATCAAACAACGGCCCACGCGTTCGTACTGGCGGGAA GAACAAGCAAAAACATTCAACATTCTATTGACGCAATTCGTCATTTGGGG CACGTAAGATATCCCCAGGTGTATCCCCAGGTGTATGTACACACCATGAG ATGATGAATTACATAACCACGGAGTGCTGTGCACGCTCTCCTCGCTTGTT TCTCGCTGCCGCCCGAGCCTAGGCTGTCGCGGAGAGCATAGGTTTTGAGT CTTTCAGCAGCGTGCTGCCTGCTACCGCCACACACGGCGAGGTCCTGGAG TGTATCCAGCGTCACAACAAAGACCCAAGGTGGGCCTATGAAATAATACG CCATACAGAGAGGGGTGCGTTCACGGCAGACGTTTTGCTGAATACTTTTG AAGTGCGCATCTCACCGCCACCGATGTGCCGACCTTTCTACGCCCCCATG CCGTTACGCACTGGCGCACAGCACTCTATCCGCGATGTCTGAGGCGTATG TGCCCACCTTTCTGTGCCTGTCGGGAGGCCCTTTACATCGAAGTTCAAGC CCGTATAAATAGTAGCAAAGCAGGGCTCGAAAGAGGCCTGAGTTTGAAGA CACAACGCGCACGAGTGTAAAAATTGGCGCCCCCTCTCCCCACGTCTCAT GCGCGTGAAGGAAGGTCAATATGTGTCTACGAGGGCTTCGCTTGACCGTT CCTCCTTCCTACCTTGTATGCTCCGCTCTCCGGGCTCTCGCTGCTTCAGA TGCCACGGAATCCTGCTGCAGCTGCCCGTCCCTGCTCACCTGGACCCCCG AGGGCTGCTGGGGGCGATAAAGGTCGAGAAGGATGTGGAGTGCTTCAACC CAACCAACGCCGGGCGAATGACGGCGTGGCGACGAACCGTCATCGCGCCC TGCACCCCCCTCGGGGTAATGGAGATGCTTCTTCGGCTCGGGGTGGAGGT GCGAGGTAAGCACGCGGTCGTGCTCGGCGAGAGCAGCGTCGTGGGCCTAC CCATGTGCCTCCTGCTCAACGAGGCTCGAGCGACGGTGTCGATGGTCCAC AAGGAGACGCCGAACCCGGAGGAGTTCACGCGCCGCGCGAGCCTCGTT
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Coding sequence (CDS) from alignment at L-elsbetiae_contig628:34047..35894+

>mRNA_L-elsbetiae_contig628.14898.1 ID=mRNA_L-elsbetiae_contig628.14898.1|Name=mRNA_L-elsbetiae_contig628.14898.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1422bp|location=Sequence derived from alignment at L-elsbetiae_contig628:34047..35894+ (Laminarionema elsbetiae ELsaHSoW15)
ATGATGAGGGCTCACATGTCTACGTGGAGACAGGGTTTCCGTCTACGAGC
ATGTCGGACACTAGCAACGGCAGCCGGGGGCTCAAGGCGGGCCCGAGCAC
AGCTGGTGAACGGGAGGGCCATGGCAACGGAAATACTGGCTGAGATGATG
AGGGCTCACATGTCTACGTGGAGACAGGGTTTCCGTCTACGAGCATGTCG
GACACTAGCAACGGCAGCCGGGGGCTCAAGGCGGGCCCGAGCACAGCTGG
TGAACGGGAGGGCCATGGCAACGGAAATACTGGCTGAGGTGCGGCGAGAA
GTGGATTTGATGAGATCGAAGCATAACACGGTGCCCGGGTTGGCCGTGAT
CATGGTGGGCGAGAGACGTGATAGCGCCAAGTATGTGTCGATGAAACAGG
TGCGGCGAGAAGTGGATTTGATGAGATCGAAGCATAACACGGTGCCCGGG
TTGGCCGTGATCATGGTGGGCGAGAGACGTGATAGCGCCAAGTATGTGTC
GATGAAACAGGCTGTCGCGGAGAGCATAGGTTTTGAGTCTTTCAGCAGCG
TGCTGCCTGCTACCGCCACACACGGCGAGGTCCTGGAGTGTATCCAGCGT
CACAACAAAGACCCAAGGCTGTCGCGGAGAGCATAGGTTTTGAGTCTTTC
AGCAGCGTGCTGCCTGCTACCGCCACACACGGCGAGGTCCTGGAGTGTAT
CCAGCGTCACAACAAAGACCCAAGATGCCACGGAATCCTGCTGCAGCTGC
CCGTCCCTGCTCACCTGGACCCCCGAGGGCTGCTGGGGGCGATAAAGGTC
GAGAAGGATGTGGAGTGCTTCAACCCAACCAACGCCGGGCGAATGACGGC
GTGGCGACGAACCGTCATCGCGCCCTGCACCCCCCTCGGGGTAATGGAGA
TGCTTCTTCGGCTCGGGGTGGAGGTGCGAGGTAAGCACGCGGTCGTGCTC
GGCGAGAGCAGCGTCGTGGGCCTACCCATGTGCCTCCTGCTCAACGAGGC
TCGAGCGACGGTGTCGATGGTCCACAAGGAGACGCCGAACCCGGAGGAGT
TCACGCGCCGCGCGAGCCTCGTTATGCCACGGAATCCTGCTGCAGCTGCC
CGTCCCTGCTCACCTGGACCCCCGAGGGCTGCTGGGGGCGATAAAGGTCG
AGAAGGATGTGGAGTGCTTCAACCCAACCAACGCCGGGCGAATGACGGCG
TGGCGACGAACCGTCATCGCGCCCTGCACCCCCCTCGGGGTAATGGAGAT
GCTTCTTCGGCTCGGGGTGGAGGTGCGAGGTAAGCACGCGGTCGTGCTCG
GCGAGAGCAGCGTCGTGGGCCTACCCATGTGCCTCCTGCTCAACGAGGCT
CGAGCGACGGTGTCGATGGTCCACAAGGAGACGCCGAACCCGGAGGAGTT
CACGCGCCGCGCGAGCCTCGTT
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