mRNA_L-elsbetiae_contig6260.14866.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6260.14866.1 vs. uniprot
Match: D8LM00_ECTSI (Zn(2)-C6 fungal-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM00_ECTSI) HSP 1 Score: 218 bits (554), Expect = 5.820e-60 Identity = 141/216 (65.28%), Postives = 154/216 (71.30%), Query Frame = 3 Query: 444 AAGNGLATQYGVVMWPSLPGLQHAAVGVAPP------APVPQQLPHHMGSNMGAGASGRGGMMGSG-QQHGLPA-ASSPMPAGDWSGAPAPTPPPKARRKP--RTNSA--KKSQPTNESPGSL-GDRDTMVVLRSACDACHRMKRKCDGLQPCNRCRRRSRQCGYSYKQKSGPPKGSKRKLIAADEDLLENRQPRPKLLPL-AMWPKESQES-HAA 1046 AA NGLATQYGVV+WPSLPGLQ AAVGVA + VP HH A+GRGGM+G G +Q GLPA A P P GDWSG P K RR R NS+ K + P E G + DRDTMVVLRSACDACHRMKRKCDGLQPCNRCRRRSR CGYSYKQKSGPPKGSKRKLIAADEDLLENRQ RPKL+ + MWPK++Q+ HAA Sbjct: 81 AAPNGLATQYGVVVWPSLPGLQQAAVGVAXXXXXSALSGVPAA--HHRMPT----AAGRGGMVGPGMEQPGLPAGAVPPGPPGDWSGIGRTMTPVKGRRTKAQRANSSGKKSNDPNTEGGGDVTNDRDTMVVLRSACDACHRMKRKCDGLQPCNRCRRRSRPCGYSYKQKSGPPKGSKRKLIAADEDLLENRQSRPKLIQVPTMWPKDAQQQGHAA 290
BLAST of mRNA_L-elsbetiae_contig6260.14866.1 vs. uniprot
Match: A0A6H5JM19_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM19_9PHAE) HSP 1 Score: 214 bits (545), Expect = 6.860e-58 Identity = 150/241 (62.24%), Postives = 161/241 (66.80%), Query Frame = 3 Query: 444 AAGNGLATQYGVVMWPSLPGLQHAAVGVAPPAPVPQ----QLPHHMGSNMGAGASGRGGMMGSG-QQHGLPAASSPMPA-GDWSGAPAPTPPPKARRKPRTNSAKKSQPTNESPGSLGDRDTMVVLRSACDACHRMKRKCDGLQPCNRCRRRSRQCGYSYKQKSGPPKGSKRKLIAADEDLLENRQPRPKLLPL-AMWPKESQES-HAAA--------ATAHAXXXXXQAALHATAVGNEA 1118 AA NGLATQYGVV+WPSLPGLQ AAVGVAPPA HH M GA GRGGM+G G +Q GLPA + P A GDWSG RT + + TN DRDTMVVLRSACDACHRMKRKCDGLQPCNRCRRRSR CGYSYKQKSGPPKGSKRKLIAADEDLLENRQ RPKL+ + MWPK++Q+ HAA ATAHAXXXXX A G EA Sbjct: 81 AAPNGLATQYGVVVWPSLPGLQQAAVGVAPPAASSALSGVAAAHH---RMPTGA-GRGGMLGPGMEQPGLPAGAVPPGAPGDWSGIG------------RTMTPGRGDVTN-------DRDTMVVLRSACDACHRMKRKCDGLQPCNRCRRRSRPCGYSYKQKSGPPKGSKRKLIAADEDLLENRQSRPKLIQVPTMWPKDAQQQGHAAXXXXXXXXXATAHAXXXXXXXXTMHVAAGGEA 298
BLAST of mRNA_L-elsbetiae_contig6260.14866.1 vs. uniprot
Match: D8LPZ9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPZ9_ECTSI) HSP 1 Score: 60.1 bits (144), Expect = 4.840e-6 Identity = 28/51 (54.90%), Postives = 34/51 (66.67%), Query Frame = 3 Query: 786 DTMVVLRSACDACHRMKRKCDGLQPCNRCRRRSRQCGYSYKQKSGPPKGSK 938 D V+LR +CD C R+KR CDG PC+ C RR C S K+KSGP KG+K Sbjct: 57 DGRVLLRKSCDLCVRLKRACDGKNPCHLCLRRRETCTRSVKRKSGPAKGTK 107
BLAST of mRNA_L-elsbetiae_contig6260.14866.1 vs. uniprot
Match: D7FPF9_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPF9_ECTSI) HSP 1 Score: 59.7 bits (143), Expect = 6.370e-6 Identity = 27/52 (51.92%), Postives = 35/52 (67.31%), Query Frame = 3 Query: 783 RDTMVVLRSACDACHRMKRKCDGLQPCNRCRRRSRQCGYSYKQKSGPPKGSK 938 RD + LR +CD C R+KR CDG PC+ C RR + C S ++KSGP KG+K Sbjct: 12 RDPTIELRKSCDYCVRLKRACDGKNPCSLCARRHKPCTRSARKKSGPAKGTK 63
BLAST of mRNA_L-elsbetiae_contig6260.14866.1 vs. uniprot
Match: A0A6H5L009_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L009_9PHAE) HSP 1 Score: 58.5 bits (140), Expect = 1.480e-5 Identity = 27/51 (52.94%), Postives = 34/51 (66.67%), Query Frame = 3 Query: 786 DTMVVLRSACDACHRMKRKCDGLQPCNRCRRRSRQCGYSYKQKSGPPKGSK 938 D V LR +CD C R+KR CDG PC+ C RR + C S ++KSGP KG+K Sbjct: 5 DPTVELRKSCDYCVRLKRACDGKNPCSLCARRHKPCTRSARKKSGPAKGTK 55
BLAST of mRNA_L-elsbetiae_contig6260.14866.1 vs. uniprot
Match: F7W882_SORMK (WGS project CABT00000000 data, contig 2.43 n=1 Tax=Sordaria macrospora (strain ATCC MYA-333 / DSM 997 / K(L3346) / K-hell) TaxID=771870 RepID=F7W882_SORMK) HSP 1 Score: 52.8 bits (125), Expect = 2.500e-5 Identity = 23/53 (43.40%), Postives = 31/53 (58.49%), Query Frame = 3 Query: 795 VVLRSACDACHRMKRKCDGLQPCNRCRRRSRQCGYSYKQKSGPPKGSKRKLIA 953 ++ ACDACHR K KCDG+ PC C C Y+ + PKGS+ K+I+ Sbjct: 3 TAVKRACDACHRRKVKCDGINPCRNCHASQLTCTYNAIPQKKGPKGSRAKVIS 55
BLAST of mRNA_L-elsbetiae_contig6260.14866.1 vs. uniprot
Match: A0A136IJ93_9PEZI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Microdochium bolleyi TaxID=196109 RepID=A0A136IJ93_9PEZI) HSP 1 Score: 56.6 bits (135), Expect = 4.060e-5 Identity = 32/65 (49.23%), Postives = 40/65 (61.54%), Query Frame = 3 Query: 744 SQPT-NESPGSLGDRDTMVVLRSACDACHRMKRKCDGLQPCNRCRRRSRQCGYSYKQKSGPPKGS 935 SQP NE P + + T LRSACDACHR K +C+G C+RC R +C YSY+ G PKG+ Sbjct: 7 SQPDGNEYPDARPE--TNQKLRSACDACHRAKVRCNGATTCSRCIRDHVECRYSYRAHLGKPKGT 69
BLAST of mRNA_L-elsbetiae_contig6260.14866.1 vs. uniprot
Match: SIRZ_LEPMC (C6 finger domain transcription factor sirZ n=2 Tax=Leptosphaeria maculans TaxID=5022 RepID=SIRZ_LEPMC) HSP 1 Score: 56.6 bits (135), Expect = 4.930e-5 Identity = 26/48 (54.17%), Postives = 33/48 (68.75%), Query Frame = 3 Query: 801 LRSACDACHRMKRKCDGLQPCNRCRRRSRQCGYSYKQKSGPPKGSKRK 944 RSAC+ACH +K KC G QPC RCR + +C YS+ + G PKGS+ K Sbjct: 24 FRSACNACHEVKLKCLGGQPCARCRNKQVECVYSHAARIGKPKGSRNK 71
BLAST of mRNA_L-elsbetiae_contig6260.14866.1 vs. uniprot
Match: UPI001B35F6AE (uncharacterized protein n=1 Tax=Cryphonectria parasitica EP155 TaxID=660469 RepID=UPI001B35F6AE) HSP 1 Score: 56.2 bits (134), Expect = 7.710e-5 Identity = 25/53 (47.17%), Postives = 33/53 (62.26%), Query Frame = 3 Query: 798 VLRSACDACHRMKRKCDGLQPCNRCRRRSRQCGYSYKQKSGPPKGSKRKLIAA 956 ++ ACDACHR K KCDG+ PC C S C Y+ + PKGS+ K+I+A Sbjct: 4 AVKRACDACHRRKVKCDGINPCRNCNTASLNCTYNAVPQKKGPKGSRAKVISA 56
BLAST of mRNA_L-elsbetiae_contig6260.14866.1 vs. uniprot
Match: A0A2T3A999_9PEZI (Zn(2)-C6 fungal-type domain-containing protein (Fragment) n=1 Tax=Coniella lustricola TaxID=2025994 RepID=A0A2T3A999_9PEZI) HSP 1 Score: 55.8 bits (133), Expect = 9.190e-5 Identity = 25/53 (47.17%), Postives = 33/53 (62.26%), Query Frame = 3 Query: 798 VLRSACDACHRMKRKCDGLQPCNRCRRRSRQCGYSYKQKSGPPKGSKRKLIAA 956 ++ ACDACHR K KCDG+ PC C S C Y+ + PKGS+ K+I+A Sbjct: 4 AVKRACDACHRRKVKCDGVNPCRNCNTASLNCTYNAVPQKKGPKGSRAKVISA 56 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6260.14866.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6260.14866.1 >prot_L-elsbetiae_contig6260.14866.1 ID=prot_L-elsbetiae_contig6260.14866.1|Name=mRNA_L-elsbetiae_contig6260.14866.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=325bp MSEAGAAVPTTAAAATASPVATFSAPVSASMPQPTTASPAGSALAASAAPback to top mRNA from alignment at L-elsbetiae_contig6260:2800..5215- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6260.14866.1 ID=mRNA_L-elsbetiae_contig6260.14866.1|Name=mRNA_L-elsbetiae_contig6260.14866.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2416bp|location=Sequence derived from alignment at L-elsbetiae_contig6260:2800..5215- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6260:2800..5215- >mRNA_L-elsbetiae_contig6260.14866.1 ID=mRNA_L-elsbetiae_contig6260.14866.1|Name=mRNA_L-elsbetiae_contig6260.14866.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1950bp|location=Sequence derived from alignment at L-elsbetiae_contig6260:2800..5215- (Laminarionema elsbetiae ELsaHSoW15)back to top |