mRNA_L-elsbetiae_contig626.14863.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig626.14863.1
Unique NamemRNA_L-elsbetiae_contig626.14863.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig626.14863.1 vs. uniprot
Match: D8LJA8_ECTSI (Ribosomal protein L19 n=2 Tax=Eukaryota TaxID=2759 RepID=D8LJA8_ECTSI)

HSP 1 Score: 349 bits (896), Expect = 4.260e-117
Identity = 187/189 (98.94%), Postives = 189/189 (100.00%), Query Frame = 1 
Query:    4 VSLKLQKRLAASVLKCGKGKIWLDPNEVNEISLANSRQNIRKLVKDGLVIRLPQVVHSRARVNLRHEAKKKGRHTGPGKRRGTANARLPFKLIWQRRMRILRRMLRKYREAKKIDKHLYHELYLGCKGNQFKNKRVLMEAIHKKKGETARIKALKEQAEARKLKAKQKNERKEDRKKAAAEARAAEIAA 570
            VSLKLQKRLAASVLKCGKGKIWLDPNEVNEISLANSRQNIRKLVKDGLVIRLPQVVHSRARVNLRHEAKKKGRHTGPGKRRGTANARLPFKLIWQRRMRILRRMLRKYREAKKIDKHLYHELYLGCKGNQFKNKRVLMEAIHKKKGETARIKALKEQAEARKLKAKQKNERKEDRKKAAAEARAAE++A
Sbjct:    2 VSLKLQKRLAASVLKCGKGKIWLDPNEVNEISLANSRQNIRKLVKDGLVIRLPQVVHSRARVNLRHEAKKKGRHTGPGKRRGTANARLPFKLIWQRRMRILRRMLRKYREAKKIDKHLYHELYLGCKGNQFKNKRVLMEAIHKKKGETARIKALKEQAEARKLKAKQKNERKEDRKKAAAEARAAEVSA 190
[Close]
BLAST of mRNA_L-elsbetiae_contig626.14863.1 vs. uniprot
Match: A0A835ZKQ0_9STRA (Ribosomal protein L19 n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZKQ0_9STRA)

HSP 1 Score: 269 bits (687), Expect = 1.520e-85
Identity = 144/182 (79.12%), Postives = 159/182 (87.36%), Query Frame = 1 
Query:    4 VSLKLQKRLAASVLKCGKGKIWLDPNEVNEISLANSRQNIRKLVKDGLVIRLPQVVHSRARVNLRHEAKKKGRHTGPGKRRGTANARLPFKLIWQRRMRILRRMLRKYREAKKIDKHLYHELYLGCKGNQFKNKRVLMEAIHKKKGETARIKALKEQAEARKLKAKQKNERKEDRKKAAAEA 549
            VSLKLQKRLAASVLKCGK KIWLDPNEVNEISLANSRQNIRKL KDGL+I+ P V+HSRARV  R+EAK+KGRHTGPGKR GTANARLPFKL+W RRMR+LRRMLRKYR+AKK+DKHLYH+LY+ CKGNQFKNKRVLMEAIHK K ET R +AL EQAEARK KA  K +RK  + + AA A
Sbjct:    2 VSLKLQKRLAASVLKCGKRKIWLDPNEVNEISLANSRQNIRKLKKDGLIIKKPTVIHSRARVLARNEAKRKGRHTGPGKRHGTANARLPFKLLWMRRMRVLRRMLRKYRDAKKVDKHLYHKLYMLCKGNQFKNKRVLMEAIHKMKAETLRERALVEQAEARKAKASAKKDRKAKKAEEAAAA 183
[Close]
BLAST of mRNA_L-elsbetiae_contig626.14863.1 vs. uniprot
Match: A0A7S2V357_9STRA (Ribosomal protein L19 n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V357_9STRA)

HSP 1 Score: 258 bits (660), Expect = 2.390e-81
Identity = 139/176 (78.98%), Postives = 155/176 (88.07%), Query Frame = 1 
Query:    4 VSLKLQKRLAASVLKCGKGKIWLDPNEVNEISLANSRQNIRKLVKDGLVIRLPQVVHSRARVNLRHEAKKKGRHTGPGKRRGTANARLPFKLIWQRRMRILRRMLRKYREAKKIDKHLYHELYLGCKGNQFKNKRVLMEAIHKKKGETARIKALKEQAEARKLKAKQKNERKEDRK 531
            VSL+LQKRLAASVLKCGK KIWLDPNE+NEIS+ANSRQNIRKLVKDGLVIR PQVVHSRARV  R+EAK KGRHTG GKR GTANARLPFKLIW RR R+LRR+LRKYR+AKKIDKHLYH+LY+  KGNQFKNK+VLMEAIH+ K E AR KAL +QAEARK +A+ K  RK ++K
Sbjct:    2 VSLRLQKRLAASVLKCGKRKIWLDPNEINEISMANSRQNIRKLVKDGLVIRKPQVVHSRARVVERNEAKAKGRHTGYGKRHGTANARLPFKLIWMRRARVLRRLLRKYRDAKKIDKHLYHDLYMRSKGNQFKNKKVLMEAIHRMKAEKAREKALADQAEARKTRARMKAARKAEKK 177
[Close]
BLAST of mRNA_L-elsbetiae_contig626.14863.1 vs. uniprot
Match: K3X7E5_GLOUD (Ribosomal protein L19 n=2 Tax=Pythiaceae TaxID=4782 RepID=K3X7E5_GLOUD)

HSP 1 Score: 258 bits (659), Expect = 3.160e-81
Identity = 139/189 (73.54%), Postives = 157/189 (83.07%), Query Frame = 1 
Query:    4 VSLKLQKRLAASVLKCGKGKIWLDPNEVNEISLANSRQNIRKLVKDGLVIRLPQVVHSRARVNLRHEAKKKGRHTGPGKRRGTANARLPFKLIWQRRMRILRRMLRKYREAKKIDKHLYHELYLGCKGNQFKNKRVLMEAIHKKKGETARIKALKEQAEARKLKAKQKNERKEDRKKAAAEARAAEIAA 570
            VSLKLQKRLAASVLKCGK K+WLDPNE  E++LANSRQNIRKLVKDG +I+ P+V+HSRAR   R+EAK+KGRHTG GKRRGTANARLPFK+IW RRMR+LRR+LRKYREAKKIDKH+YHELY+  KGNQFKNKRVLME IHK K E AR K LKEQ+EARK KAK   +RK  +  AAA     + AA
Sbjct:    2 VSLKLQKRLAASVLKCGKRKVWLDPNESTELALANSRQNIRKLVKDGFIIKKPEVIHSRARFQKRNEAKRKGRHTGIGKRRGTANARLPFKVIWMRRMRVLRRLLRKYREAKKIDKHIYHELYMRSKGNQFKNKRVLMETIHKMKAERAREKTLKEQSEARKEKAKNARDRKAQKAVAAATEEKPKAAA 190
[Close]
BLAST of mRNA_L-elsbetiae_contig626.14863.1 vs. uniprot
Match: M4C2P1_HYAAE (Ribosomal protein L19 n=26 Tax=Eukaryota TaxID=2759 RepID=M4C2P1_HYAAE)

HSP 1 Score: 255 bits (651), Expect = 3.730e-80
Identity = 140/180 (77.78%), Postives = 153/180 (85.00%), Query Frame = 1 
Query:    4 VSLKLQKRLAASVLKCGKGKIWLDPNEVNEISLANSRQNIRKLVKDGLVIRLPQVVHSRARVNLRHEAKKKGRHTGPGKRRGTANARLPFKLIWQRRMRILRRMLRKYREAKKIDKHLYHELYLGCKGNQFKNKRVLMEAIHKKKGETARIKALKEQAEARKLKAKQKNERKEDRKKAAA 543
            VSLKLQKRLAASVLKCGK KIWLDPNE NEI+LANSRQNIRKLVKDG VI+ PQV+HSRAR   R+EAK+KGRHTG GKR GTANARLPFK+IW RR+R+LRR+LRKYREAKKIDKH+YHELY+  KGNQFKNKRVLME IHK K E  R K LKEQ++ARK KAK   ERK   KK AA
Sbjct:    2 VSLKLQKRLAASVLKCGKRKIWLDPNESNEIALANSRQNIRKLVKDGFVIKKPQVIHSRARFTKRNEAKRKGRHTGIGKRHGTANARLPFKVIWMRRIRVLRRLLRKYREAKKIDKHIYHELYMRSKGNQFKNKRVLMETIHKMKAERHREKTLKEQSDARKEKAKSARERKS--KKTAA 179
[Close]
BLAST of mRNA_L-elsbetiae_contig626.14863.1 vs. uniprot
Match: A0A6V1T3Z5_HETAK (Ribosomal protein L19 n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1T3Z5_HETAK)

HSP 1 Score: 256 bits (653), Expect = 4.180e-80
Identity = 138/186 (74.19%), Postives = 157/186 (84.41%), Query Frame = 1 
Query:    4 VSLKLQKRLAASVLKCGKGKIWLDPNEVNEISLANSRQNIRKLVKDGLVIRLPQVVHSRARVNLRHEAKKKGRHTGPGKRRGTANARLPFKLIWQRRMRILRRMLRKYREAKKIDKHLYHELYLGCKGNQFKNKRVLMEAIHKKKGETARIKALKEQAEARKLKAKQKNERKEDRKKAAAEARAAE 561
            VSLKLQKRLAASVLKCGK KIWLDPNE+NEIS ANSRQNIRKL KDGL+++ PQVVHSRARV   +EAK KGRHTG GKRRGTANARLPFK+IW RRMR+LRR+L+KYR+AKK+DKHLYHELY+  KGNQFKNKRVLME+IHK K E AR KAL +QAEA+K +A+ K +RK    KA+ E    E
Sbjct:   21 VSLKLQKRLAASVLKCGKRKIWLDPNEINEISSANSRQNIRKLFKDGLLVKKPQVVHSRARVLAYNEAKAKGRHTGYGKRRGTANARLPFKIIWMRRMRVLRRLLKKYRDAKKLDKHLYHELYMRSKGNQFKNKRVLMESIHKMKAEKARAKALVDQAEAKKTRARLKKQRKLSSMKASEEEETTE 206
[Close]
BLAST of mRNA_L-elsbetiae_contig626.14863.1 vs. uniprot
Match: A0A484E6K8_BRELC (Ribosomal protein L19 n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E6K8_BRELC)

HSP 1 Score: 253 bits (646), Expect = 2.030e-79
Identity = 134/172 (77.91%), Postives = 150/172 (87.21%), Query Frame = 1 
Query:    4 VSLKLQKRLAASVLKCGKGKIWLDPNEVNEISLANSRQNIRKLVKDGLVIRLPQVVHSRARVNLRHEAKKKGRHTGPGKRRGTANARLPFKLIWQRRMRILRRMLRKYREAKKIDKHLYHELYLGCKGNQFKNKRVLMEAIHKKKGETARIKALKEQAEARKLKAKQKNERK 519
            VSLKLQKRLAASVLKCGK K+WLDPNE NEI+LANSRQNIRKLVKDG VI+ PQV+HSRAR   R+EAK+KGRHTG GKRRGTANARLPFK+IW RR+R+LRR+LRKYREAKKIDKH+YH+LY+  KGNQFKNKRVLME IHK K E  R K LKEQ+EARK KA+   +RK
Sbjct:    2 VSLKLQKRLAASVLKCGKRKVWLDPNESNEIALANSRQNIRKLVKDGFVIKKPQVIHSRARFTKRNEAKRKGRHTGIGKRRGTANARLPFKVIWMRRIRVLRRLLRKYREAKKIDKHIYHDLYMRSKGNQFKNKRVLMETIHKMKAERHREKTLKEQSEARKEKARLARDRK 173
[Close]
BLAST of mRNA_L-elsbetiae_contig626.14863.1 vs. uniprot
Match: A0A7S2G695_9STRA (Ribosomal protein L19 n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G695_9STRA)

HSP 1 Score: 253 bits (646), Expect = 2.850e-79
Identity = 135/176 (76.70%), Postives = 152/176 (86.36%), Query Frame = 1 
Query:    4 VSLKLQKRLAASVLKCGKGKIWLDPNEVNEISLANSRQNIRKLVKDGLVIRLPQVVHSRARVNLRHEAKKKGRHTGPGKRRGTANARLPFKLIWQRRMRILRRMLRKYREAKKIDKHLYHELYLGCKGNQFKNKRVLMEAIHKKKGETARIKALKEQAEARKLKAKQKNERKEDRK 531
            VSLKLQKRLAASVLKCG+ K+WLDPNE NEIS+ANSRQNIRKL+KDG V + PQVVHSR+RV    +AK+KGRHTG GKR+GTA+ARLP K++W RRMR+LRR+LRKYREAKKID+HLYHELY+ CKGNQFKNKRVLMEAIHK K   AR KAL EQA+ARK KAK K ERK  RK
Sbjct:    2 VSLKLQKRLAASVLKCGRKKVWLDPNESNEISMANSRQNIRKLIKDGFVFKKPQVVHSRSRVMRHLDAKRKGRHTGYGKRKGTADARLPLKVLWMRRMRVLRRLLRKYREAKKIDRHLYHELYMRCKGNQFKNKRVLMEAIHKMKAGKAREKALMEQADARKNKAKAKTERKMKRK 177
[Close]
BLAST of mRNA_L-elsbetiae_contig626.14863.1 vs. uniprot
Match: A0A067BLM6_SAPPC (Ribosomal protein L19 n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067BLM6_SAPPC)

HSP 1 Score: 252 bits (644), Expect = 3.670e-79
Identity = 133/172 (77.33%), Postives = 150/172 (87.21%), Query Frame = 1 
Query:    4 VSLKLQKRLAASVLKCGKGKIWLDPNEVNEISLANSRQNIRKLVKDGLVIRLPQVVHSRARVNLRHEAKKKGRHTGPGKRRGTANARLPFKLIWQRRMRILRRMLRKYREAKKIDKHLYHELYLGCKGNQFKNKRVLMEAIHKKKGETARIKALKEQAEARKLKAKQKNERK 519
            VSLKLQKRLAASVLKCGK K+WLDPNE  EI+LANSRQNIRKLVKDG VIR PQV+HSRAR   R+EAK+KGRHTG GKRRGTANARLPFK+IW RRMR+LRR+LRKYR+AKKID+H+YH+LY+  KGNQFKNKRVLME IHK K E  R KALK+Q+EARK KA+   +RK
Sbjct:    2 VSLKLQKRLAASVLKCGKRKVWLDPNESTEIALANSRQNIRKLVKDGFVIRKPQVIHSRARFTKRNEAKRKGRHTGIGKRRGTANARLPFKVIWMRRMRVLRRLLRKYRDAKKIDRHMYHDLYMRAKGNQFKNKRVLMEVIHKLKSEHIREKALKDQSEARKEKARNARDRK 173
[Close]
BLAST of mRNA_L-elsbetiae_contig626.14863.1 vs. uniprot
Match: A0A2D4BRP0_PYTIN (Ribosomal protein L19 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BRP0_PYTIN)

HSP 1 Score: 257 bits (657), Expect = 6.150e-79
Identity = 142/184 (77.17%), Postives = 157/184 (85.33%), Query Frame = 1 
Query:    4 VSLKLQKRLAASVLKCGKGKIWLDPNEVNEISLANSRQNIRKLVKDGLVIRLPQVVHSRARVNLRHEAKKKGRHTGPGKRRGTANARLPFKLIWQRRMRILRRMLRKYREAKKIDKHLYHELYLGCKGNQFKNKRVLMEAIHKKKGETARIKALKEQAEARKLKAKQKNERKEDRKKAAAEARA 555
            VSLKLQKRLAASVLKCGK K+WLDPNE NEI+LANSRQNIRKLVKDG VI+ PQV+HSR+R   R+EAK+KGRHTG GKRRGTANARLP K+IW RRMR+LRR+LRKYR+AKKID+HLYHELY+  KGNQFKNKRVLME IHK K E  R K LKEQ+EARK KAK   ERKE +K AAA A A
Sbjct:    2 VSLKLQKRLAASVLKCGKRKVWLDPNESNEIALANSRQNIRKLVKDGFVIKKPQVIHSRSRFQRRNEAKRKGRHTGIGKRRGTANARLPLKVIWMRRMRVLRRLLRKYRDAKKIDRHLYHELYMRSKGNQFKNKRVLMETIHKMKAERHREKTLKEQSEARKEKAKASRERKE-KKLAAAPAAA 184
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig626.14863.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJA8_ECTSI4.260e-11798.94Ribosomal protein L19 n=2 Tax=Eukaryota TaxID=2759... [more]
A0A835ZKQ0_9STRA1.520e-8579.12Ribosomal protein L19 n=2 Tax=Tribonema minus TaxI... [more]
A0A7S2V357_9STRA2.390e-8178.98Ribosomal protein L19 n=1 Tax=Fibrocapsa japonica ... [more]
K3X7E5_GLOUD3.160e-8173.54Ribosomal protein L19 n=2 Tax=Pythiaceae TaxID=478... [more]
M4C2P1_HYAAE3.730e-8077.78Ribosomal protein L19 n=26 Tax=Eukaryota TaxID=275... [more]
A0A6V1T3Z5_HETAK4.180e-8074.19Ribosomal protein L19 n=2 Tax=Heterosigma akashiwo... [more]
A0A484E6K8_BRELC2.030e-7977.91Ribosomal protein L19 n=1 Tax=Bremia lactucae TaxI... [more]
A0A7S2G695_9STRA2.850e-7976.70Ribosomal protein L19 n=2 Tax=Dictyocha speculum T... [more]
A0A067BLM6_SAPPC3.670e-7977.33Ribosomal protein L19 n=4 Tax=Saprolegniaceae TaxI... [more]
A0A2D4BRP0_PYTIN6.150e-7977.17Ribosomal protein L19 n=1 Tax=Pythium insidiosum T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig626contigL-elsbetiae_contig626:25599..29010 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score161.8
Seed ortholog evalue1.6e-37
Seed eggNOG ortholog2880.D8LJA8
Preferred nameRPL19
KEGG rclassRC00002,RC00017
KEGG koko:K00844,ko:K02885,ko:K14780
KEGG ReactionR00299,R00760,R00867,R01326,R01600,R01786,R01961,R03920
KEGG Pathwayko00010,ko00051,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,ko03010,ko04066,ko04910,ko04930,ko04973,ko05230,map00010,map00051,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200,map03010,map04066,map04910,map04930,map04973,map05230
KEGG ModuleM00001,M00177,M00179,M00549
Hectar predicted targeting categoryother localisation
GOsGO:0000184,GO:0000956,GO:0001889,GO:0002181,GO:0002376,GO:0002520,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005844,GO:0006139,GO:0006401,GO:0006402,GO:0006412,GO:0006413,GO:0006518,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0007275,GO:0007568,GO:0008104,GO:0008150,GO:0008152,GO:0008340,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009892,GO:0009987,GO:0010259,GO:0010467,GO:0010468,GO:0010605,GO:0010629,GO:0015031,GO:0015833,GO:0015934,GO:0016070,GO:0016071,GO:0019222,GO:0019439,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0030097,GO:0030684,GO:0030687,GO:0031099,GO:0031100,GO:0032501,GO:0032502,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0034641,GO:0034645,GO:0034655,GO:0042788,GO:0042886,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045047,GO:0045184,GO:0046483,GO:0046700,GO:0046907,GO:0048513,GO:0048519,GO:0048534,GO:0048731,GO:0048732,GO:0048856,GO:0050789,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0060255,GO:0061008,GO:0065007,GO:0070180,GO:0070727,GO:0070972,GO:0071702,GO:0071704,GO:0071705,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:0090304,GO:0097159,GO:0097421,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1990904,GO:1990932
EggNOG free text desc.structural constituent of ribosome
EggNOG OGsCOG2147@1,KOG1696@2759
Ec32 ortholog descriptionRibosomal protein L19/L19e domain
Ec32 orthologEc-02_005390.1
EC2.7.1.1,3.6.4.13
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01610,ko00000,ko00001,ko00002,ko01000,ko03009,ko03011,ko04131
Exons4
Model size1354
Cds size279
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig626.14863.1prot_L-elsbetiae_contig626.14863.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig626 26380..27312 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816687.524312-UTR-L-elsbetiae_contig626:25598..263791622816687.524312-UTR-L-elsbetiae_contig626:25598..26379Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig626 25599..26379 -
1691683740.5902998-UTR-L-elsbetiae_contig626:25598..263791691683740.5902998-UTR-L-elsbetiae_contig626:25598..26379Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig626 25599..26379 -
1622816687.5662854-UTR-L-elsbetiae_contig626:27312..273941622816687.5662854-UTR-L-elsbetiae_contig626:27312..27394Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig626 27313..27394 -
1691683740.6264486-UTR-L-elsbetiae_contig626:27312..273941691683740.6264486-UTR-L-elsbetiae_contig626:27312..27394Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig626 27313..27394 -
1622816687.5800467-UTR-L-elsbetiae_contig626:28111..281941622816687.5800467-UTR-L-elsbetiae_contig626:28111..28194Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig626 28112..28194 -
1691683740.6356823-UTR-L-elsbetiae_contig626:28111..281941691683740.6356823-UTR-L-elsbetiae_contig626:28111..28194Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig626 28112..28194 -
1622816687.593414-UTR-L-elsbetiae_contig626:28881..290101622816687.593414-UTR-L-elsbetiae_contig626:28881..29010Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig626 28882..29010 -
1691683740.6446626-UTR-L-elsbetiae_contig626:28881..290101691683740.6446626-UTR-L-elsbetiae_contig626:28881..29010Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig626 28882..29010 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816687.5381484-CDS-L-elsbetiae_contig626:26379..265841622816687.5381484-CDS-L-elsbetiae_contig626:26379..26584Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig626 26380..26584 -
1691683740.6061323-CDS-L-elsbetiae_contig626:26379..265841691683740.6061323-CDS-L-elsbetiae_contig626:26379..26584Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig626 26380..26584 -
1622816687.5517392-CDS-L-elsbetiae_contig626:27238..273121622816687.5517392-CDS-L-elsbetiae_contig626:27238..27312Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig626 27239..27312 -
1691683740.6158726-CDS-L-elsbetiae_contig626:27238..273121691683740.6158726-CDS-L-elsbetiae_contig626:27238..27312Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig626 27239..27312 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig626.14863.1

>prot_L-elsbetiae_contig626.14863.1 ID=prot_L-elsbetiae_contig626.14863.1|Name=mRNA_L-elsbetiae_contig626.14863.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=93bp
MRILRRMLRKYREAKKIDKHLYHELYLGCKGNQFKNKRVLMEAIHKKKGE
TARIKALKEQAEARKLKAKQKNERKEDRKKAAAEARAAEIAA*
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mRNA from alignment at L-elsbetiae_contig626:25599..29010-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig626.14863.1 ID=mRNA_L-elsbetiae_contig626.14863.1|Name=mRNA_L-elsbetiae_contig626.14863.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3412bp|location=Sequence derived from alignment at L-elsbetiae_contig626:25599..29010- (Laminarionema elsbetiae ELsaHSoW15)
CAGGTGTCGCTAAAGCTCCAGAAGCGGCTTGCCGCCTCCGTACTCAAGTG
CGGAAAGGGTAAGATCTGGCTCGACCCCAACGAGGTCAACGAGATCTCCC
TCGCCAACTCTCGCCAGAACATCCGGAAGGTAAGGGTTACATTACTACTG
TTGTTGAGTATGGTACTATTTGGCCTGCCGGAGGGCTCAACCTGCTGCTG
CCACGAACAAGCCGTGAACCCCAGCGATGTTGGAGATGTACAAAACCTCT
GTGTACAAGAAGCCAGAACTCTTCACTACAGCTTGAATTATGTGTTTTGC
ACAACGGGGAGGCTCTCCGAATTAGGTCCAGCAAAAATTTACATATTCCT
CAGCAGCCTGGTGCCGGAATTTTGGAGCGCATCCACCGGCCGTGTGCGGT
TGAAACCGCCAGACTTGCTGGTGCCGGTCCAAGGAACGTTCCCCGTGAGC
GTTGGCACATTCGTTTCAAAGGCAGCGTCACTGCACAACTTAAGCGGGTG
GATCAATGCGTCGTGTCTCTCGCTCTTTTTGTGCTGGTGAACTCTGGCAC
ATTCTTTATATTATGTGCCGCATCTCTCTTTTTTTCGTCACCCCGCTTGT
CTGGTCTCTCCGGAAAGACGATTTGCCGATTTCCTCACAAAACATTTGCG
CCTTTTACATACTACTGCTTTCACCCGTGTCGATCTCGTCTCGGTTCTCA
CGTCCTACCTCCCTTCTCTGTTCCTTGCCCCCCGCACCGCCGTGTCGTGT
GATACAAAATTATACGGTGCACTCTGCTCGTCTCGACGCGCCTCGACGCA
ACGCGATGCATCGCAGTTGGTGAAGGATGGACTCGTGATCCGGTTGCCGC
AGGTGGTGCACTCCCGCGCCCGAGTCAACTTGCGCCACGAGGCCAAGAAG
TGAGTCGAGTCAATGAAATCGAATCAAATCACTTGCAGGCTCTAGTTTGT
GTTTTTGACTTTTGTAGAAGATTCGCCTCGCCGATCCAAGCCCGCCCGAG
CTTGGTGTGCTCAGTGTTGTCCTGTTGTTGGGAGAACAGTATTTCCAGGA
TCTGCATGTAGTTTTAGGTTATGCGCATTTTCTTGTTTCATGGTGGGGGC
AAATATGTTCAACACATGAACAAGCCACGTTTCGTGGTGTTTTAAGGGCT
CCCACCTTGCTGTCGGGGTTTACAGACATGCATCCGCTTAGTGCATGCGA
AACGAATATACATTCATGCAGGGCAGCAGCGTGGGAGCTTTAGAGTTGTC
ATAGGAGAAACGAAACACCCCACCGTAGAGGCAAACGCATCAAGCGGCAG
TACCATAAGCAACAACACTTGTTGTCCCGCTGCAAGCGCGGCTCGTCGCA
TTGCTGGTTAGTAGGAGCTCGTCTGAGCGGCTCGTCGAAGGAAAATTGTA
TCCTCTTTTTTGGTCCATACATATCTCATGAACGCCACTCTTGCTTAGAC
ATGTGGGGTGCTGGCCTTGCACCTAACAGGAACGTGCAAAACATGCAAGC
AAGCGATGGATACTCAAAAGGCCCTTCCTCCCCTCGCTGTTTTTCCCGCT
GCTGTGGACGGCGTCCATCCGACACGACTTCACCTACGCTGTGCATCTTC
ATTTGGCGGAGCGCAGGAAAGGCAGGCACACCGGTCCCGGTAAGCGCAGG
GGTACCGCCAACGCGCGGCTCCCCTTCAAGCTCATCTGGCAGCGCCGCAT
GCGTATCCTCCGCCGCATGCTCCGCAAGTACCGCGAGGCCAAGAAGATCG
ACAAGCACCTCTACCACGAGCTGTGAGTTACTTTTGGCTCAGCCCGAAAG
GGTGTTTCCGAAATCGCTTTGGATTCAGCTGTGATTTTTGGGTGTAGCCA
AAAATTGCTCCTTGATGCCTCTGCCAAACCAAGGCATCTTAGTTTTCCTA
GAAAACGCAGTCCAATTGAGATTTACGCCGCCCTGCGATGCTACGGTTTT
GGGTTTGCAGGCAGCCTTGAAAAGCGGTTTGACTCTGCGGTGAAAACCAA
GCCATTCTTTGAAAGTTATCCTTGCCTTTCATGGTCACATCAACCAATTC
CAAACGCGTTTGCCCGGGCTAACTAGGCCAACGTTCTGGACACGGGCACG
GAGAGCAAGCATGCAGTCACCCTTGACGTGGCCATACTGACCGCAGCAGC
TGCAGTTACCCTCGAAACGGAGCGGCGCACTGCAACTATCATACTTGTGT
CTAAGTCTACCGCACCGAGGACATGTGTACACTTCACTCTGTCCTGCATC
CGGCGGAGGGGCTGTTAGCACCCCAGGGGCTAAAGATTGTACCTCTCGAA
TTCAATGCTTACCGATCGTCGTTTCTTAACATGCATCCCGACCCCCCCCC
TGTGTGTTCGGTTGATCCGCTGGCGGCCCACTCGTACTGCGACGGTGTTG
TTTGGTTTCGTTTTGGCATTCGGCAGCTACCTGGGATGCAAGGGTAACCA
GTTCAAGAACAAGCGCGTTCTGATGGAGGCTATCCACAAGAAGAAGGGGG
AGACCGCGCGTATCAAGGCGCTCAAGGAGCAGGCAGAGGCCCGCAAGCTC
AAGGCGAAGCAGAAGAACGAGCGCAAGGAGGACCGCAAAAAAGCGGCCGC
CGAGGCGCGCGCCGCGGAGATCGCCGCCTGATTTCCGTAGCGTTTCGTCG
ACGGCTCCGGCAGCGGCAGCAGCAGCAGCAGCAACACCGGACTGGACGAT
AGAAGTCTCTGCACGCACATTACATGTTTTTTGAGGAGGACGCTCCTTCC
TTCTTTTGGCGCTGGTGCCTGGTGTCCATTTTTCGGCGGCGTTTTTTTTT
GAAAGGCGCCCTTTTCTATGGCCTACGTAGCCGGTACTGCTGTTGTAGTG
GCGACGAGATGAAGGGGGGGCGAAGGTGTTTGGAGTGTTGCCACTTTCCT
GCGCGTTTTTTCTCGGCATGTGGTGGCTTTGACTGTCGTACCTCCCAAGT
TGAGCTGCAACAATGATGGTCCCATCCTATTCAAAACAATCCATTGAACC
TGAAAAAAAATTACACTAGACGCATCTCTCTTTCTGTTCCTTCTCTCATA
CTCTTCGAGAGGGCTAACACGACGTCCGCGCGCGGGTCTGCCGTGGGCGC
GTGTTTTGTGCGAAGTTTTCGCGTGAAATACACGTGCACTTGCTGCCCTC
GGCTACGATTTGGTGCCGGGTGGGGGTAGTGGGTGCGACATTTATCTGTC
CATTTTTTGGCGCAGCCGTGTTGTGCAACTCAAACGCTGACGCTGCTGCT
TTTGCTATTGACAACCCGCACATGGTACCGTTGCCTTGCTGTACATACGT
GACCCTGTCGAGTGGCCAACCGGTGGACTTGCCCCCAAATGGGCGTACGG
TGCACACGACGCGAACGAACCCACAGAAAGAGCGAGAGCCCTGTCACACA
ATCCTCTTGCTT
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Coding sequence (CDS) from alignment at L-elsbetiae_contig626:25599..29010-

>mRNA_L-elsbetiae_contig626.14863.1 ID=mRNA_L-elsbetiae_contig626.14863.1|Name=mRNA_L-elsbetiae_contig626.14863.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=558bp|location=Sequence derived from alignment at L-elsbetiae_contig626:25599..29010- (Laminarionema elsbetiae ELsaHSoW15)
ATGCGTATCCTCCGCCGCATGCTCCGCAAGTACCGCGAGGCCAAGAAGAT
CGACAAGCACCTCTACCACGAGCTATGCGTATCCTCCGCCGCATGCTCCG
CAAGTACCGCGAGGCCAAGAAGATCGACAAGCACCTCTACCACGAGCTCT
ACCTGGGATGCAAGGGTAACCAGTTCAAGAACAAGCGCGTTCTGATGGAG
GCTATCCACAAGAAGAAGGGGGAGACCGCGCGTATCAAGGCGCTCAAGGA
GCAGGCAGAGGCCCGCAAGCTCAAGGCGAAGCAGAAGAACGAGCGCAAGG
AGGACCGCAAAAAAGCGGCCGCCGAGGCGCGCGCCGCGGAGATCGCCGCC
TGACTACCTGGGATGCAAGGGTAACCAGTTCAAGAACAAGCGCGTTCTGA
TGGAGGCTATCCACAAGAAGAAGGGGGAGACCGCGCGTATCAAGGCGCTC
AAGGAGCAGGCAGAGGCCCGCAAGCTCAAGGCGAAGCAGAAGAACGAGCG
CAAGGAGGACCGCAAAAAAGCGGCCGCCGAGGCGCGCGCCGCGGAGATCG
CCGCCTGA
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