mRNA_L-elsbetiae_contig626.14860.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig626.14860.1 vs. uniprot
Match: A0A6H5L888_9PHAE (VOC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L888_9PHAE) HSP 1 Score: 716 bits (1847), Expect = 3.160e-247 Identity = 350/463 (75.59%), Postives = 390/463 (84.23%), Query Frame = 3 Query: 330 PSDKYEHPPTRRGIIVDVIVESADKFVNFMGKTTKAKEYFRFPGENGKIMHLSLDIDGVAMYIEELGNSFDKADMKGPHVRLHLNTDNPVATGAKLVEQGARELTKCEQQFWGATFGVYKDPFGQIWSVSDSSTGNLEDVPKELARKVVPFVSVRDCAGYMTFLTKALGATVVYPPAKDPTGKIMCAEMAINGGIIMLGDLCGPDASKTDATATISYEVGKDEAVPLAKSFAENGGEVMEEPSMQFWGQVWGRCKDAFXXXXXXXXXQAGPPPSHEDMQADMDIGAKHGWKYTWAVEDVPTVHCYGAISTCPATGPAISEETNKVIPAAFAGAAQAGLAMAGPPASAYYDW----GETTKFTCGPSVAGGAAATALMKDPDGGDVGLGVRAAGGCKCVTTVHTGPYDKLMEVYKATFEWVEVKGYESRMPVFELYENDPKDTPPEKLRTKICIPIVPKETPKA 1706 P D +HPPTRRGIIVDV+VESADKFV+FMGK KAKEYFRFP E+GKIMHL++DI GVA+Y+EELGN D + PH RLHLNTD+P GAKLVE GA+ELTK +QFWGATFGVY+DPFGQIWSVS+S T +EDVPKELARK++PFVSVRDC+ YMTFLT ALGA VVYPPAKDPTGKIMCAEM INGGIIMLGD C DASKT+A+ TI+YEVGKDEA PLAKSF +NGGEV+EE SMQFWGQVWGRC D F XX Q GPPPS+EDM DM+IGAK+ W+Y W VED+P V+CYGA+ST A GPAISEE NK +PAAFAGAA AGLAMAGPPASAYY W G TTKFTCGPSVAGG A +ALMKD +G D+GLGVR AGGCKCVTT+HTGPYD+L + Y+ATFEWVE KGYESRMPVFELYENDPKDTPPEKL+TK+CIPIV K TPKA Sbjct: 13 PCDGRKHPPTRRGIIVDVMVESADKFVDFMGKAAKAKEYFRFPDEDGKIMHLAIDIGGVALYVEELGNKMDTGAISTPHGRLHLNTDDPAGVGAKLVEHGAKELTKMAEQFWGATFGVYQDPFGQIWSVSNS-TNTIEDVPKELARKIIPFVSVRDCSAYMTFLTDALGAEVVYPPAKDPTGKIMCAEMKINGGIIMLGDHCSKDASKTEASMTIAYEVGKDEAGPLAKSFKDNGGEVLEEVSMQFWGQVWGRCHDPFGQPXXLCEVQEGPPPSNEDMAKDMEIGAKYNWRYNWVVEDMPIVYCYGAMSTSAANGPAISEEINKTLPAAFAGAAAAGLAMAGPPASAYYTWDSSPGGTTKFTCGPSVAGGGA-SALMKDVNGDDIGLGVRTAGGCKCVTTLHTGPYDELKKCYEATFEWVEAKGYESRMPVFELYENDPKDTPPEKLKTKVCIPIVAKGTPKA 473
BLAST of mRNA_L-elsbetiae_contig626.14860.1 vs. uniprot
Match: A0A6H5JNL3_9PHAE (AraC_E_bind domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JNL3_9PHAE) HSP 1 Score: 639 bits (1647), Expect = 4.500e-218 Identity = 313/415 (75.42%), Postives = 350/415 (84.34%), Query Frame = 3 Query: 477 MHLSLDIDGVAMYIEELGNSFDKADMKGPHVRLHLNTDNPVATGAKLVEQGARELTKCEQQFWGATFGVYKDPFGQIWSVSDSSTGNLEDVPKELARKVVPFVSVRDCAGYMTFLTKALGATVVYPPAKDPTGKIMCAEMAINGGIIMLGDLCGPDASKTDATATISYEVGKDEAVPLAKSFAENGGEVMEEPSMQFWGQVWGRCKDAFXXXXXXXXXQAGPPPSHEDMQADMDIGAKHGWKYTWAVEDVPTVHCYGAISTCPATGPAISEETNKVIPAAFAGAAQAGLAMAGPPASAYYDW----GETTKFTCGPSVAGGAAATALMKDPDGGDVGLGVRAAGGCKCVTTVHTGPYDKLMEVYKATFEWVEVKGYESRMPVFELYENDPKDTPPEKLRTKICIPIVPKET-PKA 1706 MHL++DI GVA+Y+EELGN D + PH RLHLNTD+P GAKLVE GA+ELTK +QFWGATFGVY+DPFGQIWSVS+S T +EDVPK+LARK++PFVSVRDC+ YMTF+T ALGA VVYPPAKDPTGKIMCAE+ INGGIIM+GD CG DASKT+A+ TIS+EVGKDEA PLAKSF +NGGEV+EE SMQFWGQVWGRCKD F Q GP S+EDM DM+IGAK+ W+YTWAVED+PTV+CYGA+ST ATGPAISEETNK +PAAFAGAA AGLAMAGPPASAYY W G TTKFTCGPSVAGG A +ALMKD DG D GLGVR AGGCKCVTT+HTGPYD+LM+ YKATFEWVE KGYESRMPVFELYENDPKDTPPEKL+TK+CIPIV K T PKA Sbjct: 1 MHLAIDIGGVALYVEELGNKMDTGAISTPHGRLHLNTDDPAGVGAKLVEHGAKELTKMAEQFWGATFGVYQDPFGQIWSVSNS-TNTIEDVPKKLARKIIPFVSVRDCSAYMTFVTDALGAEVVYPPAKDPTGKIMCAELKINGGIIMVGDHCGEDASKTEASMTISHEVGKDEAGPLAKSFKDNGGEVLEEVSMQFWGQVWGRCKDPFGQPWGLCEVQTGPTTSNEDMAKDMEIGAKYDWRYTWAVEDMPTVYCYGAMSTSEATGPAISEETNKTLPAAFAGAAAAGLAMAGPPASAYYTWDPSPGGTTKFTCGPSVAGGGA-SALMKDVDGDDNGLGVRTAGGCKCVTTLHTGPYDQLMKCYKATFEWVETKGYESRMPVFELYENDPKDTPPEKLKTKVCIPIVAKGTGPKA 413
BLAST of mRNA_L-elsbetiae_contig626.14860.1 vs. uniprot
Match: D8LJ97_ECTSI (AraC family transcriptional regulator n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ97_ECTSI) HSP 1 Score: 407 bits (1046), Expect = 1.230e-130 Identity = 203/275 (73.82%), Postives = 224/275 (81.45%), Query Frame = 3 Query: 894 MAINGGIIMLGDLCGPDASKTDATATISYEVGKDEAVPLAKSFAENGGEVMEEPSMQFWGQVWGRCKDAFXXXXXXXXXQAGPPPSHEDMQADMDIGAKHGWKYTWAVEDVPTVHCYGAISTCPATGPAISEETNKVIPAAFAGAAQAGLAMAGPPASAYYDW----GETTKFTCGPSVAGGAAATALMKDPDGGDVGLGVRAAGGCKCVTTVHTGPYDKLMEVYKATFEWVEVKGYESRMPVFELYENDPKDTPPEKLRTKICIPIVPKETPKA 1706 M INGGI+MLGD C DASKT+A+ T+SYEV KDEA PLAKSF +NGGEV+EE SMQFWGQVWGRCKD F Q GP PS+EDM DM+IGAK+ W YTW VED+PTV+CYGA+ST A PAISEET K +PAAFAGAA AGLAMAGPPASA+Y W G TTKFT GPSVAGG A +ALMKD DG D GLGVR AGGCKCVTT+HTGPYD+L + Y+ATFEWVE KGYESRMPVFELYENDPKDTPPEKL+TK+CIPIV K TPKA Sbjct: 1 MKINGGIVMLGDHCSKDASKTEASMTVSYEVRKDEAGPLAKSFKDNGGEVLEEVSMQFWGQVWGRCKDPFGQPWGLCEVQEGPAPSNEDMAKDMEIGAKYDWHYTWVVEDMPTVYCYGAMSTSAANTPAISEETKKTLPAAFAGAAAAGLAMAGPPASAFYTWDPSPGGTTKFTSGPSVAGGGA-SALMKDVDGDDNGLGVRTAGGCKCVTTLHTGPYDELKKCYEATFEWVEAKGYESRMPVFELYENDPKDTPPEKLKTKVCIPIVAKGTPKA 274
BLAST of mRNA_L-elsbetiae_contig626.14860.1 vs. uniprot
Match: D8LJ96_ECTSI (Glyoxalase family protein (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ96_ECTSI) HSP 1 Score: 221 bits (563), Expect = 1.150e-62 Identity = 111/184 (60.33%), Postives = 129/184 (70.11%), Query Frame = 3 Query: 327 CPSDKYEHPPTRRGIIVDVIVESADKFVNFMGKTTKAK-----------------------------------EYFRFPGENGKIMHLSLDIDGVAMYIEELGNSFDKADMKGPHVRLHLNTDNPVATGAKLVEQGARELTKCEQQFWGATFGVYKDPFGQIWSVSDSSTGNLEDVPKELARKV 773 CPSD +HPPTRRGIIV+V+VESADKFV+FMGKTTKAK EYFRFP E+GKIMHL++DI GVA+Y+EELGN D + PH RLHLNTD+P+ GAKLVE GA+ELTK +QFWGATFGVY+DPFGQIWSVS+S T +EDVPKELARK+ Sbjct: 12 CPSDGRKHPPTRRGIIVNVMVESADKFVDFMGKTTKAKIWRLTDGGGDALSRPSRTSYLAAPYTHNHRGFPVQEYFRFPDEDGKIMHLAIDIGGVALYVEELGNKMDTGAISTPHARLHLNTDDPIGVGAKLVEHGAKELTKMAEQFWGATFGVYQDPFGQIWSVSNS-TNTIEDVPKELARKI 194
BLAST of mRNA_L-elsbetiae_contig626.14860.1 vs. uniprot
Match: A0A7Y4T6R3_9PROT (VOC family protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A7Y4T6R3_9PROT) HSP 1 Score: 80.9 bits (198), Expect = 5.650e-14 Identity = 45/147 (30.61%), Postives = 70/147 (47.62%), Query Frame = 3 Query: 351 PPTRRGIIVDVIVESADKFVNFMGKTTKAKEYFRFPGENGKIMHLSLDIDGVAMYIE----ELGNSFDKADMKGPHVRLHLNTDNPVATGAKLVEQGARELTKCEQQFWGATFGVYKDPFGQIWSVSDSSTGNLEDVPKELARKVVP 779 P G+ ++ A + F + A E R PG++GKIMH ++ I+G ++ + E GN +KG V LHL + A+ V+ GAR + FWG +G+ +DPFG WS++ + E ARK +P Sbjct: 9 PQGMHGLSPHLVCAGAASAIAFYEEAFDATEMVRLPGQDGKIMHAAISINGASVMLTDENLEYGNK-SPTTLKGTPVTLHLMVADVDKVFAQAVQAGARPVMPVADMFWGDRYGIVEDPFGHRWSIATPKQNLTQSQIMEAARKAMP 154
BLAST of mRNA_L-elsbetiae_contig626.14860.1 vs. uniprot
Match: UPI00199F96D6 (VOC family protein n=1 Tax=Steroidobacteraceae bacterium TaxID=2689616 RepID=UPI00199F96D6) HSP 1 Score: 74.7 bits (182), Expect = 9.170e-12 Identity = 43/147 (29.25%), Postives = 73/147 (49.66%), Query Frame = 3 Query: 381 VIVESADKFVNFMGKTTKAKEYFRFPGENGKIMHLSLDI-DGVAMYIEELGN--SFDKADMKGPHVRLHLNTDNPVATGAKLVEQGARELTKCEQQFWGATFGVYKDPFGQIWSVSDSSTGNLEDVPKELARKVVPFVSVRDCAGYM 812 +I + A + ++F + A+ + G +G++MH +L + D V M +E FD G V +HL+ + A+ A+ + GA L + FWGA +GV+KDPFG WSV+ K+L+ + + +V+ C M Sbjct: 20 LICKGATQAIDFYARALGAQTISKLVGPSGRLMHAALRVGDSVLMLTDECPEMGGFDPLHFGGTAVTIHLSVADADASFARAMAAGATPLMPVTEMFWGARYGVFKDPFGHAWSVATQV--------KDLSPEEIQVAAVKACGEQM 158
BLAST of mRNA_L-elsbetiae_contig626.14860.1 vs. uniprot
Match: A0A285SF85_9HYPH (Uncharacterized conserved protein PhnB, glyoxalase superfamily n=4 Tax=Stappia indica TaxID=538381 RepID=A0A285SF85_9HYPH) HSP 1 Score: 70.1 bits (170), Expect = 3.700e-10 Identity = 41/135 (30.37%), Postives = 67/135 (49.63%), Query Frame = 3 Query: 381 VIVESADKFVNFMGKTTKAKEYFRFPGENGKIMHLSLDIDGVAMYIEELGNSFDKADMKGPH------VRLHLNTDNPVATGAKLVEQGARELTKCEQQFWGATFGVYKDPFGQIWSVSDSSTGNLEDVPKELAR 767 ++ A + + F A E R GE+G+IMH L I+G ++ + + + + +KGP V LH+ ++ A A+ VE GA + + FWG +G+ +DPFG W+VS L D +E A+ Sbjct: 20 LVCAGAAQAIEFYTAAFGAHELMRLDGEDGRIMHACLRINGSSVMLVD---EWPERGVKGPRLLGGSAVTLHMIVEDADAVAARAVEAGASLVMPVAEMFWGDRYGLLEDPFGHRWAVSTPVRTVLGDDLREAAK 151
BLAST of mRNA_L-elsbetiae_contig626.14860.1 vs. uniprot
Match: UPI000F83A009 (GyrI-like domain-containing protein n=1 Tax=Sulfuriflexus mobilis TaxID=1811807 RepID=UPI000F83A009) HSP 1 Score: 68.2 bits (165), Expect = 1.500e-9 Identity = 29/60 (48.33%), Postives = 39/60 (65.00%), Query Frame = 3 Query: 1503 KCVTTVHTGPYDKLMEVYKATFEWVEVKGYESRMPVFELYENDPKDTPPEKLRTKICIPI 1682 K V+ +H GPY + Y A F+W++ GYE+ +E+Y NDP TPPEKL TKI +PI Sbjct: 92 KSVSCLHIGPYSDVESTYNALFKWIKDSGYEATGVAYEMYLNDPDQTPPEKLETKIFLPI 151
BLAST of mRNA_L-elsbetiae_contig626.14860.1 vs. uniprot
Match: A0A2W0B984_9BACT (Glyoxalase n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2W0B984_9BACT) HSP 1 Score: 67.8 bits (164), Expect = 2.040e-9 Identity = 43/138 (31.16%), Postives = 68/138 (49.28%), Query Frame = 3 Query: 387 VESADKFVNFMGKTTKAKEYFRFPGENGKIMHLSLDI-DGVAMYIEEL--GNSFDKADMKGPHVRLHLNTDNPVATGAKLVEQGARELTKCEQQFWGATFGVYKDPFGQIWSVSDSSTGNLEDV-PKELARKVVPFVS 788 + A K ++F + AKE FR PG +GKIMH + I D M +E G + + G + L ++ A+ + ++ GA+E + FWG FG DPFG W ++ ++EDV P E+ ++ VS Sbjct: 21 IRGAAKAIDFYKQAFGAKELFRMPGPDGKIMHAEILIGDSHVMLADESPKGETKSPQTLNGSASGIFLYLEDVDASFKQALKAGAKETQPLQDMFWGDRFGKLTDPFGHRWMLAS----HIEDVSPAEMEERMAAAVS 154
BLAST of mRNA_L-elsbetiae_contig626.14860.1 vs. uniprot
Match: A0A538R437_9BACT (VOC family protein n=1 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A538R437_9BACT) HSP 1 Score: 67.8 bits (164), Expect = 2.140e-9 Identity = 45/134 (33.58%), Postives = 65/134 (48.51%), Query Frame = 3 Query: 381 VIVESADKFVNFMGKTTKAKEYFRFPGENGKIMHLSLDI-DGVAMYIEELGNSFDKADMK--GPHVRLHLNTDNPVATGAKLVEQGARELTKCEQQFWGATFGVYKDPFGQIWSVSDSSTGNLEDVPK-ELARK 770 +IV+ A++ + F K A E FR +GKI H + I D V M +E + A K G V +H+ +N A AK GA QF+G G ++DPFG W ++ ++EDVP EL R+ Sbjct: 17 LIVDGAERALEFYKKAFGATELFRHKAPDGKIGHAEIRIGDTVVMVADEFPDHGAYAPKKFGGSPVSMHVYVENVDAVAAKATAAGATAKRPVADQFYGERMGTFEDPFGHTWHIAT----HVEDVPPAELDRR 146 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig626.14860.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig626.14860.1 >prot_L-elsbetiae_contig626.14860.1 ID=prot_L-elsbetiae_contig626.14860.1|Name=mRNA_L-elsbetiae_contig626.14860.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=481bp MSTLDGTRSGGGEEPQAKKPCPSDKYEHPPTRRGIIVDVIVESADKFVNFback to top mRNA from alignment at L-elsbetiae_contig626:512..8098+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig626.14860.1 ID=mRNA_L-elsbetiae_contig626.14860.1|Name=mRNA_L-elsbetiae_contig626.14860.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=7587bp|location=Sequence derived from alignment at L-elsbetiae_contig626:512..8098+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig626:512..8098+ >mRNA_L-elsbetiae_contig626.14860.1 ID=mRNA_L-elsbetiae_contig626.14860.1|Name=mRNA_L-elsbetiae_contig626.14860.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2886bp|location=Sequence derived from alignment at L-elsbetiae_contig626:512..8098+ (Laminarionema elsbetiae ELsaHSoW15)back to top |