mRNA_L-elsbetiae_contig6253.14852.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6253.14852.1 vs. uniprot
Match: A0A6H5JGU8_9PHAE (MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGU8_9PHAE) HSP 1 Score: 587 bits (1512), Expect = 3.930e-202 Identity = 302/465 (64.95%), Postives = 338/465 (72.69%), Query Frame = 3 Query: 510 AESEGCFTMTDIYNWRGTVSSGGVVSSKGPIYQLDDSGGIVENPGAIGSPVTNKWLLTAELYMTNGAVFYCIGTSAGGDCDELRIQSTGDDDFYEVRGHGGSMYFEKTLVTSWDTSKKTPQTTYKGGRSFLNCVSEKLTGESCEGAAKNAMGECRMDIIDSEMGWMGFFDSESYGLTWKVR---------GLCRDLSNLDVFETTNVYGDIKGSDIHHMYYGHYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIANXXXXXXXXXXXXXXXXXXXXXXXXXXVRDGGAQAAGIFLHRSSDNAEVYGNTITNMQDAGIALLESFDADIHDNIIDGVRYGIRMSLGSARNXXXXXXXXXXXXXXXXXXXGSDAPDVDGGRPYSNTFDSNKITNTSGGVKFKNSDGLTITNNEFTGTAGMEFFDAQGTTWEDNDLPPTACVDNVSSDDGNSVDESTFSSSSNGLP 1877 AESEGCFT+TD+YN+RGT + G SSKGP+Y LD SG + P + VT KWLL AELY+TNGA+FYCIG+ GGDCDELRIQSTG DD+YEVRGHGGSMYF T+VTSWDT K PQ TY+GGRSFLNCVSEKLTGE+C+G AKN MGECRMDII+SEMG+MGFFDSESYGLTWKVR G C+DLSN DVFETTNVYGDIK SDIHHMYYGHYSYGHQGGVWTNN+MHDNHQY +AN V DGG A GIFLHRSSDNAEVYGN I NM DAGIALLESF+ADIHDN IDGV++GIRMSLGS N GSD PDV GRP NTF++NK+TN++GGVKFKNSD + +TNNEFTGT +EF+DAQ TTW N LP C+DN++SDDGNSV STFSSSS G+P Sbjct: 17 AESEGCFTLTDLYNFRGTENDG---SSKGPLYMLDGSGSKITAP----TSVTKKWLLEAELYVTNGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKQPQETYEGGRSFLNCVSEKLTGETCDGMAKNDMGECRMDIINSEMGYMGFFDSESYGLTWKVRRQAGRGVVRGFCKDLSNPDVFETTNVYGDIKNSDIHHMYYGHYSYGHQGGVWTNNEMHDNHQY------------VANNKVYNNYNHGIIASKRCNNVKIYDNQVSDGGPDAVGIFLHRSSDNAEVYGNKIWNMPDAGIALLESFNADIHDNEIDGVQFGIRMSLGSGGNSVYDNEFNDCSDWGLYTYMGSDEPDVSNGRPNGNTFNNNKVTNSAGGVKFKNSDNIVVTNNEFTGTEELEFYDAQATTWSGNSLPSGVCIDNITSDDGNSVPPSTFSSSS-GVP 461
BLAST of mRNA_L-elsbetiae_contig6253.14852.1 vs. uniprot
Match: D8LRM4_ECTSI (Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRM4_ECTSI) HSP 1 Score: 536 bits (1382), Expect = 1.320e-181 Identity = 298/586 (50.85%), Postives = 353/586 (60.24%), Query Frame = 3 Query: 144 NCSNGLAGYEASGVCCPTDCGQCGGVGC----SALGGNDCCTSNILAXXXXXXXXXXXXXXXDDKGGASPTPMVXXXXXXXXXXXXXXXXSSSPTPVMTIPTSCSGPVPTFRYAASTGLVSKGRLYAESEGCFTMTDIYNWRGTVSSGGVVSSKGPIYQLDDSGGIVENPGAIGSPVTNKWLLTAELYMTNGAVFYCIGTSAGGDCDELRIQSTGDDDFYEVRGHGGSMYFEKTLVTSWDTSKKTPQTTYKGGRSFLNCVSEKLTGESCEGAAKNAMGECRMDIIDSEMGWMGFFDSESYGLTWKVRGLCRDLSNLDVFETTNVYGDIKGSDIHHMYYGHYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLT--IANXXXXXXXXXXXXXXXXXXXXXXXXXXVRDGGAQAAGIFLHRSSDNAEVYGNTITNMQDAGIALLESFDADIHDNIIDGVRYGIRMSLGSARNXXXXXXXXXXXXXXXXXXXGSDAPD--VDGGRPYSNTFDSNKITNTSGGVKFKNSDGLTITNNEFTGTAGMEFFDAQGTTWEDNDLPPTACVDNVSSDDGNSVDESTFSSSSNGLP 1877 CSNG G ++ +CC DCG CGG C LG DCC + I DD G +P AE EGCFT+TD+YN+R + S G S+KGPI+ LDDS V NP + +NKWLLTAEL++T GAVFYC G+S GGDCDELRIQSTG DF+EVR HGGSMYFE T+VTSWDT KTPQ TY GGRSFLNCVSEKLTGE C G A+N MGECRMDII+SE+G++G+FDSESYGLTWKVRG C+DLSN DVF+TTNVYG++ GSDIHH YYG YSYGHQGGVW NN+MHDNHQYGFDPHDDSDYLT IA+ V DGG AAGIFLHRSSD A V+ N + +MQDAG+A+LES +ADI++N V++GIR+SLGS+ N GSD P V GRP N F++N+I N + GVK K D IT+N FTGT+ +EFFDAQ T W+ N LP C+ N+ SDDG ++ STF + GLP Sbjct: 11 KCSNGFVGVQSENICCHVDCGTCGGSECRRRGKGLGAADCCRNYISKNGALCSENLSAPCIMDDVTGNTPD-------------------------------------------------------AEGEGCFTITDLYNFR--LESDG--SAKGPIFNLDDSYNTVLNPKVL----SNKWLLTAELHITGGAVFYCRGSSIGGDCDELRIQSTGPTDFHEVRAHGGSMYFESTIVTSWDTPNKTPQATYVGGRSFLNCVSEKLTGEVCVGQAQNEMGECRMDIINSEIGYLGYFDSESYGLTWKVRGFCKDLSNPDVFDTTNVYGNLIGSDIHHNYYGQYSYGHQGGVWHNNQMHDNHQYGFDPHDDSDYLTSIIASKRCNNVQIYNNE--------------VYDGGPFAAGIFLHRSSDYAIVHDNVVHDMQDAGMAMLESMNADIYNNRFSSVKFGIRLSLGSSENHVHENLFEDVSTQGLYTYQGSDEPTDGVSDGRPSDNLFENNRILNVTKGVKIKEGDDTVITDNVFTGTSELEFFDAQNTRWKGNTLPQGVCIKNIHSDDGIDIELSTFDRRTAGLP 519
BLAST of mRNA_L-elsbetiae_contig6253.14852.1 vs. uniprot
Match: D8LC73_ECTSI (Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC73_ECTSI) HSP 1 Score: 541 bits (1394), Expect = 2.080e-178 Identity = 279/458 (60.92%), Postives = 319/458 (69.65%), Query Frame = 3 Query: 420 VMTIPTSCSGPV--PTFRYAASTGLVSKGRLYAESEGCFTMTDIYNWRGTVSSGGVVSSKGPIYQLDDSGGIVENPGAIGSPVTNKWLLTAELYMTNGAVFYCIGTSAGGDCDELRIQSTGDDDFYEVRGHGGSMYFEKTLVTSWDTSKKTPQTTYKGGRSFLNCVSEKLTGESCEGAAKNAMGECRMDIIDSEMGWMGFFDSESYGLTWKVRGLCRDLSNLDVFETTNVYGDIKGSDIHHMYYGHYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIANXXXXXXXXXXXXXXXXXXXXXXXXXXVRDGGAQAAGIFLHRSSDNAEVYGNTITNMQDAGIALLESFDADIHDNIIDGVRYGIRMSLGSARNXXXXXXXXXXXXXXXXXXXGSDAPDVDGGRPYSNTFDSNKITNTSGGVKFKNSDGLTITNNEFTGTAGMEFFDAQGTTWEDNDL 1787 +M I +SC P+FRYAAS+G+ GRLYAE EGCFTMTD+YN+RGT + G SSKGP+Y LDD G ++ P S +TN WLL AELY+T G VFYC GTSAGGDC++LRIQSTG DDF+EVRGHGGS+YFE T+VTSWDT K PQ TY+ GRSFLNCVSEKLTG+ CEG AKN MGECRMDII+SE+ ++G+FDSESYG+TWKVRG C+DLSN +VFE TNVYGD+ GSDIHH+YYGHYSYGHQGGVWTNNKMHDN QYGFDPHDDSDYLTIA VRDGGA AAGIFLHRSSD A V+ NTITNMQDAGIA+LESFDA I+ NII+G +YGIRMSLGS N GSD PDV GRP N N + + GVK K D N F EF ++ T W ND+ Sbjct: 414 LMEISSSCGDDEDRPSFRYAASSGVA--GRLYAEGEGCFTMTDLYNFRGTENDG---SSKGPVYMLDDDGTKLDIP----SGITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYENGRSFLNCVSEKLTGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKVRGFCKDLSNPEVFELTNVYGDLTGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTIAYNEVYNNVNHGIIASKRCNNVKIFENEVRDGGAAAAGIFLHRSSDGAAVFDNTITNMQDAGIAMLESFDAQIYGNIINGAKYGIRMSLGSGNNEVYQNSFTDISQYGLYTYEGSDEPDVSDGRPSGNVLALNLVEDCPIGVKIKEGDDNEFYQNTFINVDAFEFPESTNTMWSGNDI 862
BLAST of mRNA_L-elsbetiae_contig6253.14852.1 vs. uniprot
Match: D7FIU4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIU4_ECTSI) HSP 1 Score: 492 bits (1267), Expect = 1.300e-166 Identity = 268/423 (63.36%), Postives = 298/423 (70.45%), Query Frame = 3 Query: 609 LDDSGGIVENPGAIGSPVTNKWLLTAELYMTNGAVFYCIGTSAGGDCDELRIQSTGDDDFYEVRGHGGSMYFEKTLVTSWDTSKKTPQTTYKGGRSFLNCVSEKLTGESCEGAAKNAMGECRMDIIDSEMGWMGFFDSESYGLTWKVRGLCRDLSNLDVFETTNVYGDIKGSDIHHMYYGHYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIANXXXXXXXXXXXXXXXXXXXXXXXXXXVRDGGAQAAGIFLHRSSDNAEVYGNTITNMQDAGIALLESFDADIHDNIIDGVRYGIRMSLGSARNXXXXXXXXXXXXXXXXXXXGSDAPDVDGGRPYSNTFDSNKITNTSGGVKFKNSDGLTITNNEFTGTAGMEFFDAQGTTWEDNDLPPTACVDNVSSDDGNSVDESTFSSSSNGLP 1877 LDDSG + +P + VT KWLL +ELY+T+GA+FYCIG+ GGDCDELRIQSTG DD+YEVRGHGGSMYF T+VTSWDT K PQ TY+GGRSFLNCVSEKLTGE+C+G AKN GECRMDII+SEMG+MGFFD+ESYGLTWKVRG C+DLSN DVFETTNVYGDIK S+IHHMYYG YSYGHQGGVWTNN+MHDNHQYGFDPHDDSDYLTIA XXXXXXXXXXXX V DGG +A GIFLHRSSDNAEVYG DAPDV GRP NTF++NKITNT+GGVK KNSD + I+NN+FTGT +EFFDAQ TTW DN LP C+DNV+SDDGNSV STFSSSS G+P Sbjct: 2 LDDSGNKITSP----TSVTKKWLLESELYVTDGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKKPQETYEGGRSFLNCVSEKLTGETCDGKAKNDEGECRMDIINSEMGYMGFFDAESYGLTWKVRGFCKDLSNPDVFETTNVYGDIKNSNIHHMYYGMYSYGHQGGVWTNNEMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXASKRCNNVQIYNNEVSDGGPEAVGIFLHRSSDNAEVYGGXXXXXX-------------------------------------------------------XDAPDVSNGRPNGNTFNNNKITNTAGGVKIKNSDNIVISNNDFTGTEELEFFDAQATTWSDNSLPSGVCIDNVTSDDGNSVPPSTFSSSS-GVP 364
BLAST of mRNA_L-elsbetiae_contig6253.14852.1 vs. uniprot
Match: D7FRR8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR8_ECTSI) HSP 1 Score: 471 bits (1212), Expect = 4.040e-157 Identity = 247/455 (54.29%), Postives = 299/455 (65.71%), Query Frame = 3 Query: 522 GCFTMTDIYNWRGTVSSGGVVSSKGPIYQLDDSGGIVENPGAIGSPVTNKWLLTAELYMTNGAVFYCIGTSAGGDCDELRIQSTGDDDFYEVRGHGGSMYFEKTLVTSWDTSKKTPQTTYKGGRSFLNCVSEKLTGESCEGAAKNAMGECRMDIIDSEMGWMGFFDSESYGLTWKVRGLCRDLSNLDVFETTNVYGDIKGSDIHHMYYGHYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIANXXXXXXXXXXXXXXXXXXXXXXXXXXVRDGGAQAAGIFLHRSSDNAEVYGNTITNMQDAGIALLESFDADIHDNIIDGVRYGIRMSLGSARNXXXXXXXXXXXXXXXXXXXGSDAPDVDGGRPYSNTFDSNKITNTSGGVKFKNSDGLTITNNEFTGTAGMEFFDAQGTTWEDNDLPPTACVDNVSSDDGNSVDESTFSSSSNGLPGSC 1886 GCFT++D+Y W+G ++G +SKGP++ LD + + E + T KWLLTA+L++T GA YC G GG+C ELRI+ST DF+E+RGHGG++YFE T+VTSWD + PQ TYK GRSF+ CVSE LTGE A N MGECRMDIIDSEMG++G+ SE+YG+TWKVRG C DLSN DVF+ NVYGD+KGSDIHHMYYG YS+GHQGGVWTNN MHDNHQYGFDPHDDSDYL IA V DGGA AAGIFLHRS D++EVYGNTITNM DAGIA+LE+ DIHDN +DG +GIR+ LGS+ N GSD P V GGRP N F +N I T GVK K SD ++ITNN F+GT +EF +A W N +P C++++ D NS TF+ SS GLP C Sbjct: 10 GCFTLSDLYAWQGFYNNG---NSKGPVFVLDSNDRVDET----ATTTTGKWLLTADLFVTGGATLYCRGKGVGGNCAELRIRSTSGSDFFEIRGHGGNLYFEDTIVTSWDVDGRKPQETYKDGRSFIRCVSEVLTGEDT--CAINNMGECRMDIIDSEMGYLGYDASEAYGITWKVRGFCSDLSNPDVFDDVNVYGDMKGSDIHHMYYGMYSFGHQGGVWTNNLMHDNHQYGFDPHDDSDYLIIAGNKVYNNVNHGIIASKRCNNVKIYDNEVYDGGADAAGIFLHRSGDDSEVYGNTITNMGDAGIAMLETSGCDIHDNQVDGGEFGIRVHLGSSNNKVHDNVFKNIWNVGMFTYVGSDEPWVGGGRPCDNEFYNNTIQATETGVKIKESDNISITNNAFSGTTEIEFNNAIDIVWSGNSIPTNTCLEDI---DNNS----TFTGSS-GLPLEC 447
BLAST of mRNA_L-elsbetiae_contig6253.14852.1 vs. uniprot
Match: A0A6H5KWQ2_9PHAE (MEP2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWQ2_9PHAE) HSP 1 Score: 457 bits (1175), Expect = 6.300e-153 Identity = 230/344 (66.86%), Postives = 262/344 (76.16%), Query Frame = 3 Query: 534 MTDIYNWRGTVSSGGVVSSKGPIYQLDDSGGIVENPGAIGSPVTNKWLLTAELYMTNGAVFYCIGTSAGGDCDELRIQSTGDDDFYEVRGHGGSMYFEKTLVTSWDTSKKTPQTTYKGGRSFLNCVSEKLTGESCEGAAKNAMGECRMDIIDSEMGWMGFFDSESYGLTWK--------VRGLCRDLSNLDVFETTNVYGDIKGSDIHHMYYGHYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLT--IANXXXXXXXXXXXXXXXXXXXXXXXXXXVRDGGAQAAGIFLHRSSDNAEVYGNTITNMQDAGIALLESFDADIHDNIIDGVRYGIRMSLGSARN 1535 MTD+YN+RGT G SSKGP+Y LDD G ++ P S +TN WLL AELY+T G VFYC GTSAGGDC++LRIQSTG DDF+EVRGHGGS+YFE T+VTSWDT K PQ TY+GGRSFLNCVSEKLTG+ CEG AKN MGECRMDII+SE+ ++G+FDSESYG+TWK VRG C+DLSN +VF+ TNVYGD+ GSDIHH+YYGHYSYGHQGGVWTNNKMHDN QYGFDPHDDSDYLT IA+ VRDGGA A GIFLHRSSD+A V+ NTITNMQDAGIALLE+FDA I+ N I+G +YGIRMSLGS N Sbjct: 1 MTDLYNFRGTEKDG---SSKGPVYMLDDDGTKLDIP----SGITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYEGGRSFLNCVSEKLTGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKARLTRGFPVRGFCKDLSNPEVFDLTNVYGDLIGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTRIIASKRCNNVKIFENE--------------VRDGGAAAVGIFLHRSSDDAAVFDNTITNMQDAGIALLEAFDAQIYGNTINGAKYGIRMSLGSGNN 323
BLAST of mRNA_L-elsbetiae_contig6253.14852.1 vs. uniprot
Match: A0A6H5JNF5_9PHAE (MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNF5_9PHAE) HSP 1 Score: 360 bits (923), Expect = 4.480e-109 Identity = 201/444 (45.27%), Postives = 259/444 (58.33%), Query Frame = 3 Query: 498 GRLYAESEGCFTMTDIYNWRGTVSSGGVVSSKGPIYQLDDSGGIVENPGAIGSPVTNKWLLTAELYMTNGAVFYCIGTSAGGDCDELRIQSTGDDDFYEVRGHGGSMYFEKTLVTSWDTSKKTPQTTYKGGRSFLNCVSEKLTG--ESCEGAAKNAMGECRMDIIDSEMGWMGFFDSESYGLTWKVRGLCRDLSNLDVFETTNVYGDIKGSDIHHMYYGHYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIANXXXXXXXXXXXXXXXXXXXXXXXXXXVRDGGAQAAGIFLHRSSDNAEVYGNTITNMQDAGIALLESFDADIHDNIIDGVRYGIRMSLGSARNXXXXXXXXXXXXXXXXXXXGSDAPDVD---GGRPYSNTFDSNKITNTSGGVKFKNSDGLTITNNEF-TGTAGME--FFDAQGTTWEDNDLPPTACV 1805 G+ Y GC T+TDIY +G + GP++ LD N +G T WLL ++++ G++ G AGGD LRIQSTG D+YE+RGHGGS+ F T VTSWDT +K T YK RSF+ CVSE+L ++C+G A N MGECRMDII SEMG MG+ +ESYG++WKVRG C + N +VFE T V GDI SDI+ MYYGHYS+GH GG+WT NKMHDN QYGFDPHDDSD L IA V DGG A GIFLHRSSD+ EV+GNT+ +M+DAG+A++ES A IHDN V+YGIR+S+G+ARN G+D P+ G NTF +N + GGVK + ++G+ T+N F ++G E F D + W +N +P C+ Sbjct: 398 GKNYIRGGGCATLTDIYTAQGGHND------DGPLFVLDS------NDNVVGGSPTGYWLLMRDIHVEEGSLLQVHGPDAGGDARVLRIQSTGSRDYYEIRGHGGSLSFMDTKVTSWDTDEKKVNTNYKKERSFIRCVSEELADKPDTCDGHAVNHMGECRMDIIRSEMGEMGYDAAESYGISWKVRGYCSEDPNPEVFERTRVRGDIIDSDIYGMYYGHYSFGHDGGIWTGNKMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWGNTVYDMKDAGMAIMESMGAHIHDNTFTNVKYGIRLSVGAARNIVENNSFLECDQYGIYTYQGNDKPEASKDWDGLLVDNTFHANTVE---GGVKIQKAEGIVFTDNNFYEHSSGEEYRFEDCEDVVWTNNRVPDDICL 826
BLAST of mRNA_L-elsbetiae_contig6253.14852.1 vs. uniprot
Match: D7G8D9_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8D9_ECTSI) HSP 1 Score: 351 bits (900), Expect = 5.060e-108 Identity = 215/473 (45.45%), Postives = 261/473 (55.18%), Query Frame = 3 Query: 402 SSSPTPVMTIPTSCSGPVPTFRYAASTGLVSKGRLYAESEGCFTMTDIYNWRGTVSSGGVVSSKGPIYQLDDSGGIVENPGAIGSPVTNKWLLTAELYMTNGAVFYCIGTSAGGDCDELRIQSTGDDDFYEVRGHGGSMYFEKTLVTSWDTSKKTPQTTYKGGRSFLNCVSEKLTGE--SCEGAAKNAMGECRMDIIDSEMGWMGFFDSESYGLTWKVRGLCR---DLS---NLDVFETTNVYGDIKGSDIHHMYYGHYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIANXXXXXXXXXXXXXXXXXXXXXXXXXXVRDGGAQAAGIFLHRSSDNAEVYGNTITNMQDAGIALLESFDADIHDNIIDGVRYGIRMSLGSARNXXXXXXXXXXXXXXXXXXXGSDAPDV--DGGRPYSNTFDSNKITNTSG---GVKFKNSDGLTITNNEFTGTAGMEFFDAQGTTWEDN 1781 S++PTP T TSC +A+T + Y E GC T+T +Y + GP+Y LD EN +G T WLL L + +G+ GT+A GD D LR+ ST DD F EVRG+GG+++F+ T VTSWDT + GRSF+NCV++ C+G + GECRMDII S MG MG+FD+ESYGLTWKVRG C D N ++FE NVYGDI S+I+ MYYGHYSYGHQGGVW +N M DN QYGFDPHDDSD LTI+N V DGG A GIFLHRSSD AEV+ N + NMQDAG+A++ES+DA+I+DN RYGIR+SLGS RN GSD PDV GRP N FD N I T G GV K D +N FTG + EF D+ TTW DN Sbjct: 167 STTPTPSAT--TSCD--------SAATVRFTDDIAYFEGGGCGTLTQMYEAQ---------EGDGPLYVLD------ENNDVVGGTPTGYWLLDRNLRVVDGSTLLVHGTAASGDADVLRLLSTSDD-FIEVRGYGGNLHFQSTTVTSWDTDNGQEREWDGDGRSFINCVTQFDDSAIWDCDGRSNQEWGECRMDIISSTMGNMGWFDAESYGLTWKVRGACEIDPDTGVPYNHEIFEDHNVYGDILNSEIYGMYYGHYSYGHQGGVWDSNIMRDNIQYGFDPHDDSDDLTISNNIVYGNGNHGIIASKRCNNVKIFNNEVYDGGEDAVGIFLHRSSDGAEVHDNVVYNMQDAGMAMMESYDANIYDNSFTNCRYGIRLSLGSGRNIITNNLFSGITQYGLYTYMGSDDPDVPNSNGRPSDNVFDGNTIE-TDGDNIGVHIKEGDSNVFIDNVFTGVSTYEFEDSSDTTWVDN 612
BLAST of mRNA_L-elsbetiae_contig6253.14852.1 vs. uniprot
Match: D7FWE8_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWE8_ECTSI) HSP 1 Score: 350 bits (898), Expect = 1.990e-105 Identity = 243/566 (42.93%), Postives = 295/566 (52.12%), Query Frame = 3 Query: 186 CCPTDCGQCGGVGCS----ALGGNDCCTSNILAXXXXXXXXXXXXXXXDDKGGASPTPMVXXXXXXXXXXXXXXXXSSSPTPVMTIPTSCSGPVPTFRYAASTGLVSKGRLYAESEGCFTMTDIYNWRGTVSSGGVVSSKGPIYQLDDSGGIVENPGAIGSPVTNKWLLTAELYMTNGAVFYCIGTSAGGDCDELRIQSTGDDDFYEVRGHGGSMYFEKTLVTSWDTSKKTPQTTYKGGRSFLNCVSEKLTGE--SCEGAAKNAMGECRMDIIDSEMGWMGFFDSESYGLTWKVRGLCRDLSNLDVFETTNVYGDIKGSDIHHMYYGHYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIANXXXXXXXXXXXXXXXXXXXXXXXXXXVRDGGAQAAGIFLHRSSDNAEVYGNTITNMQDAGI------------------------ALLESFDADIHDNIIDGVRYGIRMSLGSARNXXXXXXXXXXXXXXXXXXXGSDAPDVDG--GRPYSNTFDSNKITNTSGGVKFKNSDGLTITNNEFTGTAGMEFFDAQGTTWEDNDL 1787 CC CG+CGG L G DCCTS+I D G +PTP XXXXXXXXXXXXXXX G + + ++ + S G GC T+TD+YN + S GP+Y LD S IV G SP T WLLT+ L + +G Y GTSAGGD D LRIQST DDDF+E+RG GGS+ F +T VTSWDT K +T Y+GGRSF+NCV++ + SC G + GECRMDIIDS MG MG+FD+ESYGLTWKVRGLC DLSN+++ + NVYGDIKGS+I+ MYYG YSYGHQGGVWT+N M DN YGFDPHDDSD LTIA G GI + +N E+Y AL+ESF A+I+DN I+ +YGIR+SLGSA N GSD PDV G GR N+FD+N I+NT +K K D + TNN F EF D+ T W +ND+ Sbjct: 323 CCSAGCGECGGXXXXXXXXGLTGADCCTSDIS--NLCSVTGAAPCIVDGDSTGPTPTPXXXXXXXXXXXXXXXXX----------------GTIASISTSSDSSSFSGG-------GCATLTDMYNTQ---------SGSGPLYVLDSSNNIVSGGGGSASP-TGYWLLTSSLEILDGVTLYVHGTSAGGDADVLRIQST-DDDFWEIRGWGGSLSFLETTVTSWDTDKGEERTEYEGGRSFINCVTQFDDSDIWSCSGRSNKERGECRMDIIDSTMGNMGWFDAESYGLTWKVRGLCSDLSNVEIMDDHNVYGDIKGSEIYGMYYGMYSYGHQGGVWTDNVMRDNILYGFDPHDDSDDLTIAGNTVY--------------------------GNGNHGIIASKRCNNVEIYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALMESFRAEIYDNTIENCKYGIRLSLGSADNDIHDNTFDSSSTYGLYTYKGSDDPDVSGNDGRVKDNSFDANTISNTDVAMKIKEGDDNSFTNNVFENVKTFEFEDSTDTVWTNNDI 826
BLAST of mRNA_L-elsbetiae_contig6253.14852.1 vs. uniprot
Match: D8LRN0_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRN0_ECTSI) HSP 1 Score: 343 bits (879), Expect = 2.190e-104 Identity = 265/673 (39.38%), Postives = 320/673 (47.55%), Query Frame = 3 Query: 81 MKFSVVLLLALLLPIVVTQAQNCSNGLAGYEASGVCCPTDCGQCGGVGCSA----LGGNDCCTSNILAXXXXXXXXXXXXXXXD-----------------------DK--------------------------------------------GG---------------------ASPTPMVXXXXXXXXXXXXXXXXSSSPTPVMTIPTSCSG-----------PVPTFRYAASTGLVSKGRLYAESEGCFTMTDIYNWRGTVSSGGVVSSKGPIYQLDDSGGIVENPGAIGSPVTNKWLLTAELYMTNGAVFYCIGTSAGGDCDELRIQSTGDDDFYEVRGHGGSMYFEKTLVTSWDTSKKTPQTTYKG-GRSFLNCVSEKLTGESCEGAAKNAMGECRMDIIDSEMGWMGFFDSESYGLTWKVRGLCRDLSNLDVFETTNVYGDIKGSDIHHMYYGHYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIANXXXXXXXXXXXXXXXXXXXXXXXXXXVRDGGAQAAGIFLHRSSDNAEVYGNTITNMQDAGIALLESFDADIHDNIIDGVRYGIRMSLGSARNXXXXXXXXXXXXXXXXXXXGSDAPDVDGGRPYSNTFDSNKITNTSGGVKFKNSDGLTITNNEFTGTAGMEFFDAQGTTWEDNDL 1787 M+FS ++L +L + V AQ CSNG G E SG CC +DCG CGG GCS+ L G+DCCT NIL D DK GG + P V +SP P T T PVP+ +T + K Y +S GC T+TD+YN + GP++ LD + V+ G P T +WLLT+ + + + A + G GGDCD LRI+STG ++E+ GHGG+MYFE T VTSWDTSK + K GRSF+ C+++ SC G + MG CRMDIIDS MG MG+ SESYGLTWKVRGLC++LSNL +F+ NVYGDIK SDI+ MYYG YSYGH+GGVWTNNKMHDN QYGFDPHDDSD L IA+ XXXXXXXXXXXXXXXXXXXXXXXX A LESFDADI+DN I +YGIR+SLGS N GSD+PDV GRP N F+ N ++NT GV K D NN FT EF ++ T W N L Sbjct: 1 MRFSKLVLP--MLSVGVAAAQKCSNGFPGIEKSGACCVSDCGTCGGSGCSSRESGLTGDDCCTKNILKQGAPCSATGHAPCFLDGDSTPSKSTPTESDGFVYEGCFNDKPEPDRLFSYVTTMDDMTTELCANECKGYAFFGLQWGREAGCGTCGGTGCSQRPGLTDSDCCIGKIEESGPLCSVTGKAPCFVDGDSSAPEQTSPVPSPTPKTXXXXXXRSATPTPPTPVPSGCDTKATVQIDKDTAYFKSGGCATLTDLYNAQ---------DGTGPLWVLDSNDNKVDGAGGSAKP-TGRWLLTSNIKIEDDATLFVEGKDRGGDCDVLRIESTGSK-YWEIFGHGGNMYFEGTKVTSWDTSKGKEREYKKNEGRSFIRCITQYDDNYSCSGGSNKDMGTCRMDIIDSTMGNMGYDASESYGLTWKVRGLCKNLSNLKLFDKRNVYGDIKNSDIYGMYYGMYSYGHEGGVWTNNKMHDNVQYGFDPHDDSDNLVIAHNVXXXXXXXXXXXXXXXXXXXXXXXXXXX--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFLESFDADIYDNRIVNCKYGIRLSLGSGDNDITNNTFDNISKYGLYTYKGSDSPDVSNGRPKGNKFEGNTVSNTKIGVLGKEGDDNIFKNNVFTNVDTFEFEKSKDTEWTGNSL 658 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6253.14852.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6253.14852.1 >prot_L-elsbetiae_contig6253.14852.1 ID=prot_L-elsbetiae_contig6253.14852.1|Name=mRNA_L-elsbetiae_contig6253.14852.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=603bp MKFSVVLLLALLLPIVVTQAQNCSNGLAGYEASGVCCPTDCGQCGGVGCSback to top mRNA from alignment at L-elsbetiae_contig6253:5193..10209- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6253.14852.1 ID=mRNA_L-elsbetiae_contig6253.14852.1|Name=mRNA_L-elsbetiae_contig6253.14852.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5017bp|location=Sequence derived from alignment at L-elsbetiae_contig6253:5193..10209- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6253:5193..10209- >mRNA_L-elsbetiae_contig6253.14852.1 ID=mRNA_L-elsbetiae_contig6253.14852.1|Name=mRNA_L-elsbetiae_contig6253.14852.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3618bp|location=Sequence derived from alignment at L-elsbetiae_contig6253:5193..10209- (Laminarionema elsbetiae ELsaHSoW15)back to top |