mRNA_L-elsbetiae_contig624.14838.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig624.14838.1 vs. uniprot
Match: A0A6H5JG16_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JG16_9PHAE) HSP 1 Score: 420 bits (1080), Expect = 2.590e-136 Identity = 260/429 (60.61%), Postives = 296/429 (69.00%), Query Frame = 1 Query: 88 MLVLLVVLLVPCALVSALVRCDESWSSTALAFASSSAPLLRRSNAPPATV--DAAVIGARKKERASPVITMLISGPCPSATARSFGXXXXXXSCGSSPENSCALIWLGTSSSPGVAISGASRNQDAGCNNSPCRRRSRGXXXXXXXXXS--ALHAMAIPARCALPCVSLLRQAYGPRRSFWGDLTPAETRRFYHELLPVSIYLDAVGSRGAADGEGRPLGGGTSGGGLATVVDVAN-QETGYWECFFGSAETLEERARLASMARHAARLYVRERCHLPSRVVAHLYDGLRHLKEFGTFRVTGMTWEELWDKYERKILAEDPTLEGEDLKTSVCLRILEKSCSTSEVFNNLSGCSELNTFLPETAAAAACXXXXXXXXXTPTL-AEARAAESAAACAGALRLIPLIKPFGRLPHLRSPDDEAKVVQKRAR 1356 +L LL +L CALVS + D S + +LAF P L R A V D++ +G R++E+ + ITML T R+FG +W TS S G+ SGASRN A SP RRR R S ALHAMAIPARCALP V LLRQAYGPRR FWGDLTPAETRRFYHELLPVS+Y+DAVG++ DG RPLGGG SGGGLATVVDVAN Q+ G+WE FFG+AETLEERARLASMARHAARLYVRERC LPSRVVAHLYDGLRHLK G+FRVTG TW ELWDKYERKI +EDP+LEGEDLKT++CLRILEKSCSTSE+FNNLSGCS+LN+FLP+T A PT EA AAESAAACAGALRLIPL++PF R + + A VVQKRA+ Sbjct: 6 LLALLPLLSAACALVSGFIGDDLSAARGSLAFCLQ--PELPRHGRSEAVVGKDSSTVGPRRQEKTA--ITML-------TTTRTFG---------------AGSMWPATSPSGGIG-SGASRNDGA----SPGRRRPRARTGGSSSANSDSALHAMAIPARCALPSVDLLRQAYGPRRHFWGDLTPAETRRFYHELLPVSVYVDAVGAKALCDGNERPLGGGMSGGGLATVVDVANRQQGGHWEYFFGAAETLEERARLASMARHAARLYVRERCKLPSRVVAHLYDGLRHLKRHGSFRVTGETWPELWDKYERKIRSEDPSLEGEDLKTAICLRILEKSCSTSEMFNNLSGCSDLNSFLPDTLTETA-----------PTQHQEAFAAESAAACAGALRLIPLMQPFRRT---KMQGEGAVVVQKRAK 389
BLAST of mRNA_L-elsbetiae_contig624.14838.1 vs. uniprot
Match: A0A835YPF0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPF0_9STRA) HSP 1 Score: 160 bits (404), Expect = 5.380e-40 Identity = 94/200 (47.00%), Postives = 119/200 (59.50%), Query Frame = 1 Query: 532 LHAMAIPARCALPCVSLLRQAYGPRRSFWGDLTPAETRRFYHELLPVSIYLDAVGSRGAADGEGRPLGGGTSGGGLATVVDVANQETGYWECFFGSAETLEERARLASMARHAARLYVRERCHLPSRVVAHLYDGLRHLKEFGTFRVTGMTWEELWDKYERKILAEDPTLEGED-LKTSVCLRILEKSCSTSEVFNNLSG 1128 L A +P + V LLR+ YGP R+FWGDL+ +TR FYH+LLPVS+ + AAD PL TLEERAR ASMARHAARLY RERC LPSR+ A LYDG RHL+ +GT+ +G TW+ELW KYE ++ AE GE+ ++ VC RILEKSCST+++F+ L+G Sbjct: 71 LAAAVLPDPYPVAEVDLLRRIYGPARNFWGDLSAQQTRAFYHDLLPVSLLQL---EQEAADASA-PL-------------------------------TLEERARRASMARHAARLYARERCALPSRITAALYDGFRHLQRYGTWNASGQTWDELWAKYEVQVRAELGPQAGEEAIRDGVCWRILEKSCSTNKMFDRLTG 235
BLAST of mRNA_L-elsbetiae_contig624.14838.1 vs. uniprot
Match: A0A836C9L0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9L0_9STRA) HSP 1 Score: 150 bits (379), Expect = 1.100e-36 Identity = 87/206 (42.23%), Postives = 118/206 (57.28%), Query Frame = 1 Query: 526 SALHAMAIPARCALPCVSLLRQAYGPRRS-FWGDLTPAETRRFYHELLPVSIYLDAVGSRGAADGEGRPLGGGTSGGGLATVVDVANQETGYWECFFGSAETLEERARLASMARHAARLYVRERCHLPSRVVAHLYDGLRHLKEFGTFRVTGMTWEELWDKYERKILAE-DPTLEGEDLKTSVCLRILEKSCSTSEVFNNLSGCSE 1137 S L A +P + + LR+ YGPRR+ FWGDL+ +TR FYHELLPVS+ +A D+ + TLEERAR ASMARHAARLY RERC LP R+ A LYDG RH +++GT+ +G TW+ELW KYE ++ E P + ++ +VC RILEKSC T+++F+ L+G ++ Sbjct: 78 SHLSAAVLPDPYPVADLQSLRKVYGPRRNKFWGDLSNKQTRAFYHELLPVSLQFEAD--------------------------DLCSL-------------TLEERARRASMARHAARLYARERCALPGRLTAVLYDGFRHFRKYGTWNSSGQTWDELWAKYEGQVRRECGPEASEDAIRDAVCRRILEKSCCTNKMFDRLAGMAD 244
BLAST of mRNA_L-elsbetiae_contig624.14838.1 vs. uniprot
Match: A0A7S2V3N8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V3N8_9STRA) HSP 1 Score: 129 bits (325), Expect = 1.000e-29 Identity = 70/188 (37.23%), Postives = 100/188 (53.19%), Query Frame = 1 Query: 565 LPCVSLLRQAYGPRRSFWGDLTPAETRRFYHELLPVSIYLDAVGSRGAADGEGRPLGGGTSGGGLATVVDVANQETGYWECFFGSAETLEERARLASMARHAARLYVRERCHLPSRVVAHLYDGLRHLKEFGTFRVTGMTWEELWDKYERKILAEDPTLEGEDLKTSVCLRILEKSCSTSEVFNNLSG 1128 L V RQ YG + +WGD + +ETR+ YHELLPVS +D + +LEERA+ AS ARH+AR+Y RERC LP R+VA LYDG R + G + G+TWE++W KYE+++L E P + +DL+ V RI++ +C T+ VF++ +G Sbjct: 107 LTTVDDFRQTYGHNKHWWGDFSSSETRKLYHELLPVSF----------------------------ASLDQTH------------GMSLEERAKAASAARHSARIYARERCTLPGRIVAQLYDGFRSWRSHGEWNPDGLTWEQIWLKYEKRVLKELPNISNDDLEEEVYRRIIQSACRTNNVFDSATG 254
BLAST of mRNA_L-elsbetiae_contig624.14838.1 vs. uniprot
Match: K8YVG2_NANGC (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=K8YVG2_NANGC) HSP 1 Score: 111 bits (277), Expect = 1.340e-22 Identity = 77/184 (41.85%), Postives = 94/184 (51.09%), Query Frame = 1 Query: 583 LRQAYGPRRSFWGDLTPAETRRFYHELLPVSIYLDAVGSRGAADGEGRPLGGGTSGGGLATVVDVANQETGYWECFFGSAETLEERARLASMARHAARLYVRERCHLPSRVVAHLYDGLRHLKEFGTFRVTGMTWEELWDKYERKI---LAEDPT---LEGEDLKTSVCLRILEKSCSTSEVFN 1116 LR +G + SFWGDL ETR YH+LLP + DA + P A +E+ ARLAS ARHAARLY RER LP R+ A LYDG RHL FG + TGM++EE+W KYE KI LAE+ + E+L V RILEKSC T+ F+ Sbjct: 130 LRTRHG-QGSFWGDLNHVETRYVYHQLLPRHLLQDA---------QAHP-----------------------------DALAVEDLARLASTARHAARLYARERSSLPLRLAAGLYDGFRHLSTFGRWSWTGMSYEEVWCKYESKIQKELAEEGRAGQVGQEELNRMVAFRILEKSCETNSGFD 274
BLAST of mRNA_L-elsbetiae_contig624.14838.1 vs. uniprot
Match: W7TMN0_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TMN0_9STRA) HSP 1 Score: 111 bits (277), Expect = 2.600e-22 Identity = 77/184 (41.85%), Postives = 94/184 (51.09%), Query Frame = 1 Query: 583 LRQAYGPRRSFWGDLTPAETRRFYHELLPVSIYLDAVGSRGAADGEGRPLGGGTSGGGLATVVDVANQETGYWECFFGSAETLEERARLASMARHAARLYVRERCHLPSRVVAHLYDGLRHLKEFGTFRVTGMTWEELWDKYERKI---LAEDPT---LEGEDLKTSVCLRILEKSCSTSEVFN 1116 LR +G + SFWGDL ETR YH+LLP + DA + P A +E+ ARLAS ARHAARLY RER LP R+ A LYDG RHL FG + TGM++EE+W KYE KI LAE+ + E+L V RILEKSC T+ F+ Sbjct: 130 LRTRHG-QGSFWGDLNHVETRYVYHQLLPRHLLQDA---------QAHP-----------------------------DALAVEDLARLASTARHAARLYARERSSLPLRLAAGLYDGFRHLSTFGRWSWTGMSYEEVWCKYESKIQKELAEEGRAGQVGQEELNRMVAFRILEKSCETNSGFD 274
BLAST of mRNA_L-elsbetiae_contig624.14838.1 vs. uniprot
Match: A0A7S2KET3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KET3_9STRA) HSP 1 Score: 107 bits (268), Expect = 2.950e-21 Identity = 69/192 (35.94%), Postives = 92/192 (47.92%), Query Frame = 1 Query: 574 VSLLRQAYGPRRS-FWGDLTPAETRRFYHELLP-VSIYLDAVGSRGAADGEGRPLGGGTSGGGLATVVDVANQETGYWECFFGSAETLEERARLASMARHAARLYVRERCHLPSRVVAHLYDGLRHLKEFGTFRVTGMTWEELWDKYERKILAE-------DPTLEGEDLKTSVCLRILEKSCSTSEVFNNL 1122 VS LR +G R+ WGDL R+ YH LLP V + L + GE PL A AR AA+ Y RERC++P R+ A +DG+RH K +G + GM+W+E+W+KYE +I E DPTL+ EDL VCLRILEKSC T++ + + Sbjct: 143 VSTLRSLFGANRNKLWGDLDNESARKLYHSLLPRVLLKLYQTRDFDISPGELAPL---------------------------------------AYEARVAAKEYARERCNVPGRIFAMAFDGIRHFKTYGKWSSKGMSWDEIWEKYELEIQEEIMSMHGLDPTLKVEDLTREVCLRILEKSCKTNDAIDKM 295
BLAST of mRNA_L-elsbetiae_contig624.14838.1 vs. uniprot
Match: A0A6U0ZDZ1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A6U0ZDZ1_9STRA) HSP 1 Score: 101 bits (251), Expect = 5.600e-20 Identity = 68/186 (36.56%), Postives = 96/186 (51.61%), Query Frame = 1 Query: 574 VSLLRQAYGPRRSFWGDLTPAETRRFYHELLPVSIYLDAVGSRGAADGEGRPLGGGTSGGGLATVVDVANQETGYWECFFGSAETLEERARLASMARHAARLYVRERCHLPSRVVAHLYDGLRHLKEFGTFRVTGMTWEELWDKYERKI---LAEDPTLEGEDLKTSVCLRILEKSCSTSEVFNNL 1122 V++LRQ YG R ++WGDL+ +TR Y LLP I ++ E + L L++RA +ASMAR+AA++Y RERC +P RV A+ YD R+ G + TGMT +++W+KYER+I L ED T + L S+ RIL KSCST+ + L Sbjct: 105 VNILRQEYGERANWWGDLSSRQTRLLYQRLLPRVIL---------SEDEFQDL-------------------------------PLKDRAYIASMARYAAKIYARERCRVPGRVAANFYDATRYAIRTGRWSWTGMTVDDIWNKYEREIKSELGEDVT--EDKLYKSLYERILSKSCSTNPFIDQL 248
BLAST of mRNA_L-elsbetiae_contig624.14838.1 vs. uniprot
Match: A0A7S2A7A3_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A7A3_TRICV) HSP 1 Score: 98.2 bits (243), Expect = 2.780e-18 Identity = 63/185 (34.05%), Postives = 91/185 (49.19%), Query Frame = 1 Query: 574 VSLLRQAYGPRRS-FWGDLTPAETRRFYHELLPVSIYLDAVGSRGAADGEGRPLGGGTSGGGLATVVDVANQETGYWECFFGSAETLEERARLASMARHAARLYVRERCHLPSRVVAHLYDGLRHLKEFGTFRVTGMTWEELWDKYERKILAE-DPTLEGEDLKTSVCLRILEKSCSTSEVFNNL 1122 VS LR +G R+ WGD P TRR YH LLP ++ +A ++ G T +E A LA AR+AA+ Y RER +P RV + YDG R + +G + GMTWE++W+KYE++I+ E + E+L +CLRILE+SC T+ + + Sbjct: 35 VSTLRHTFGTNRNKLWGDFDPETTRRLYHTLLPRAL--------------------------------MALKDLGIM--------TEKELAPLAYEARNAAKKYARERSMVPGRVFSMCYDGYRSWRSYGKWNPEGMTWEQVWEKYEQQIVDELSDDHDDEELTRQICLRILERSCKTNPTVDKI 179
BLAST of mRNA_L-elsbetiae_contig624.14838.1 vs. uniprot
Match: A0A7S2I6R8_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I6R8_9STRA) HSP 1 Score: 97.8 bits (242), Expect = 5.770e-18 Identity = 65/199 (32.66%), Postives = 91/199 (45.73%), Query Frame = 1 Query: 574 VSLLRQAYGPRRS-FWGDLTPAETRRFYHELLPVSIYLDAVGSRGAADGEGRPLGGGTSGGGLATVVDVANQETGYWECFFGSAETLEERARLASMARHAARLYVRERCHLPSRVVAHLYDGLRHLKEFGTFRVTGMTWEELWDKYERKILAEDPTLEG---------------EDLKTSVCLRILEKSCSTSEVFNNL 1122 VS LR +G R+ WGD P TRR YH LLP ++ + E G + +E A LA AR AA+ Y RERC +P RV+A YDG R K +G F V GM+W+++W KYER+++ E + ED+ VCL+ILE+SC +++ + L Sbjct: 79 VSTLRSTFGTNRNKLWGDYDPETTRRLYHTLLPRAL--------------------------------LGLHELGLMKP--------DELAPLAYEARTAAKKYARERCVVPGRVLAMAYDGYRQWKNYGKFNVEGMSWDQIWQKYERQVVNEQAQRKEDEDVTERRKQARALEEDITEQVCLKILERSCISNDAVDRL 237 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig624.14838.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig624.14838.1 >prot_L-elsbetiae_contig624.14838.1 ID=prot_L-elsbetiae_contig624.14838.1|Name=mRNA_L-elsbetiae_contig624.14838.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=454bp MLVLLVVLLVPCALVSALVRCDESWSSTALAFASSSAPLLRRSNAPPATVback to top mRNA from alignment at L-elsbetiae_contig624:19425..23122- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig624.14838.1 ID=mRNA_L-elsbetiae_contig624.14838.1|Name=mRNA_L-elsbetiae_contig624.14838.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3698bp|location=Sequence derived from alignment at L-elsbetiae_contig624:19425..23122- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig624:19425..23122- >mRNA_L-elsbetiae_contig624.14838.1 ID=mRNA_L-elsbetiae_contig624.14838.1|Name=mRNA_L-elsbetiae_contig624.14838.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2724bp|location=Sequence derived from alignment at L-elsbetiae_contig624:19425..23122- (Laminarionema elsbetiae ELsaHSoW15)back to top |