mRNA_L-elsbetiae_contig624.14837.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig624.14837.1 vs. uniprot
Match: D8LIG9_ECTSI (Major facilitator transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIG9_ECTSI) HSP 1 Score: 888 bits (2295), Expect = 3.620e-316 Identity = 541/721 (75.03%), Postives = 562/721 (77.95%), Query Frame = 1 Query: 190 MSTSGRFRSPR-PXXXXXXXXXXXIASWAGQEDXXXXXXXXXXXPVXXXXXXXXXXXXXSRADSSDTASMSSRGRCDSGGSTPGEGCSEGIGGASXXXXXXVLPSSG---------RRSRKRDWFKVLLAARNLATCVYAISYTTTLPVLPFMVNRLIYPRDPEGPDDPGSDGVPEAWRGMAYGLVMSGYYLTKMISAPWIGFLSDRMGRRQALVVTLLGGALSFLVTKLWGQYSIQGLILCRLLMGCFAANGALMHAYIRDTVPPEWQSSAFSQHSASWGCAYLAAPALIAWAGDSADAILTVATVTMVISAAIVEITFVDTRPEGHRTQRMSRVVSDYLLEGASSLAEVAIEGARDLAEVGKKVSGMDLADYFNGGREKDASPPPLPTPPSHPDSVARGLGFRERSGGAGEIGGGGDLGDXXXXXXXXXXXLGGAGGEGLRHRNVTGGGGGSAVSGTAGGVEA--NGFVGAGAGIGGAN--FDVPPDASAGVSGVGELAAAXXXXXXXXXXEDRPRAGSMSTSALVGVFKGMMKERLVVVTFVLQLLRPAQDLAPLVALKFSGGASVLAGITSSRSLCRVLVPMTPLIPWLVRLAGGHSSAGAAAKMGGDRAVAASMCVLMAGLVACVPVVGTLRDLHHLMAVKGLCYIVRESTAGAVMARAAGTASVGAFFGWQHCIKGFQGTFSHFLTGWLSGYSISLPYYVVAFCDLLYALAYLYI 2310 MS GR+RS R P XXX IASWAGQED XXXXXXXXXXXXX ADSSDTASMSSRGRCDSGGSTPGE GA XXXXXX +RSRKRDWFKVLLAARNLATCVYA+SYTTT+PVLPFM NRLIYPR P+G DPGS+GV EAWRGMAYGLVMSGYYLTKMISAPWIGFLSDRMGRRQALVVTLLGGALSFLVTKLWGQYSI GLI+CRLLMGCFAANGALMHAYIRDTVPPEWQSSAFSQHSASWGCAYLAAPALIAWAGDSADAILTVAT+TM+ISAAIVEITFVDTRPEG RTQRMSRVVSDYLLEGAS+LAEVAIE EVGKKVSG++LA+YFNGGRE+D LP G R+ SG A GG DLG XX EGLRHRNV GV+A NGF G GA GGA DVP +ASAGV GVGEL AA + A MS SALVGVFKGMMKERLV+VTFVLQ +RPAQDLAPLVALKFSGGASVLAGITSSRSLCRVLVPMTPLIPWLVRLAGG SSAGAAAKMGGDRAVAA MCVLMAGLVACVP VGTLR+LHHLMA KGLCYIVRESTAGAVMARAAGTASVGAFFGWQHCIKG QGTFSHFLTGWLSGYSISLPYYVV CDLLYA YLYI Sbjct: 1 MSGYGRYRSLRAPPXXXHESLRRRIASWAGQEDRPPVDWFPTGHXXXXXXXXXXXXXXXXXADSSDTASMSSRGRCDSGGSTPGESSGSFGEGAXXXXXXXXXXXXXXXXXXXXXXKRSRKRDWFKVLLAARNLATCVYAVSYTTTMPVLPFMANRLIYPRGPDGAGDPGSEGVREAWRGMAYGLVMSGYYLTKMISAPWIGFLSDRMGRRQALVVTLLGGALSFLVTKLWGQYSIHGLIMCRLLMGCFAANGALMHAYIRDTVPPEWQSSAFSQHSASWGCAYLAAPALIAWAGDSADAILTVATMTMIISAAIVEITFVDTRPEGCRTQRMSRVVSDYLLEGASNLAEVAIEXXXXXXEVGKKVSGVNLAEYFNGGRERDTPSLSLPXXXXXXXXXXXXXGLRQSSGTA--AGGVVDLGGSGXX-------------EGLRHRNV------GXXXXXXIGVDAQTNGFGGRGAADGGAGARLDVPVEASAGVCGVGELPAAGGAKGKGAGEGRKILAEGMSASALVGVFKGMMKERLVLVTFVLQAVRPAQDLAPLVALKFSGGASVLAGITSSRSLCRVLVPMTPLIPWLVRLAGGSSSAGAAAKMGGDRAVAAFMCVLMAGLVACVPAVGTLRELHHLMAFKGLCYIVRESTAGAVMARAAGTASVGAFFGWQHCIKGIQGTFSHFLTGWLSGYSISLPYYVVGICDLLYAFTYLYI 700
BLAST of mRNA_L-elsbetiae_contig624.14837.1 vs. uniprot
Match: A0A835YWB9_9STRA (Major facilitator superfamily domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWB9_9STRA) HSP 1 Score: 211 bits (537), Expect = 3.970e-59 Identity = 113/204 (55.39%), Postives = 145/204 (71.08%), Query Frame = 1 Query: 514 SRKRDWFKVLLAARNLATCVYAISYTTTLPVLPFMVNRLIYPRDPE--GPDDP----GSDGVPEAWRGMAYGLVMSGYYLTKMISAPWIGFLSDRMGRRQALVVTLLGGALSFLVTKLWGQYSIQGLILCRLLMGCFAANGALMHAYIRDTVPPEWQSSAFSQHSASWGCAYLAAPALIAWAGDSADAILTVATVTMVISAAIV 1107 S ++W V+ + RN+ T VYA+SYT ++PVLPFM R +Y E GPD S GVPEAWRG+ YG VMSGYY TKMI+AP IGFLSDR+GR+ LVVT LG ++F +T L G++S+ GL+LCRLL+GCFAANGALM AYIRD+VP E Q+SAF+QHSA+WG AY+ A L+A + L +A V M ++A +V Sbjct: 65 SSAKEWAAVVFSPRNVVTLVYALSYTLSIPVLPFMARRHLYGYRDEFVGPDGKVMIDESPGVPEAWRGIGYGCVMSGYYATKMIAAPLIGFLSDRVGRKMLLVVTFLGSCVTFTLTCLMGRHSLHGLVLCRLLLGCFAANGALMMAYIRDSVPREAQASAFAQHSAAWGMAYVVATPLLAALREDPVRCLVLAAVCMALAALLV 268
BLAST of mRNA_L-elsbetiae_contig624.14837.1 vs. uniprot
Match: A0A835YM00_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM00_9STRA) HSP 1 Score: 167 bits (423), Expect = 4.550e-44 Identity = 99/195 (50.77%), Postives = 126/195 (64.62%), Query Frame = 1 Query: 1726 LVGVFKGMMKERLVVVTFVLQLLRPAQDLAPLVALKFSGGASVLAGITSSRSLCRVLVPMTPLIPWL-VRLAGGHSSAGAAAKMGGDRAVAASMCVLMAGLVACVPVVGTLRDLHHLMAVKGLCYIVRESTAGAVMARAAGTASVGAFFGWQHCIKGFQGTFSHFLTGWLSGYSISLPYYVVAFCDLLYALAYLY 2307 +V VF+ M++ERLV+ F LQ++RPAQDLAPLV KF GA+ +A ITS RS R+L+P+TP+IP L L GG +GGDR VAA MCV MA L A VP+ L L +MA KGL +++EST A+M+ A +VGAFFGWQH +KG G SH +TG L PY+ A CDLLYAL Y++ Sbjct: 1 MVRVFRSMLQERLVLCIFALQVIRPAQDLAPLVTSKFGAGAAFVASITSVRSTFRMLLPLTPVIPMLHAALGGGTRDPKTGEVVGGDRPVAAVMCVAMALLGALVPLCPNLVVLQVVMAAKGLANVIKESTVSAIMSSLASHGNVGAFFGWQHFMKGLAGVTSHMVTGLLVSRGPEHPYFATAACDLLYALIYVF 195
BLAST of mRNA_L-elsbetiae_contig624.14837.1 vs. uniprot
Match: A0A4Y5Z9U7_9GAMM (TCR/Tet family MFS transporter n=1 Tax=Luteibacter pinisoli TaxID=2589080 RepID=A0A4Y5Z9U7_9GAMM) HSP 1 Score: 73.6 bits (179), Expect = 4.420e-10 Identity = 55/165 (33.33%), Postives = 82/165 (49.70%), Query Frame = 1 Query: 535 KVLLAARNLATCVYAISYTTTLPVLPFMVNRLIYPRDPEGPDDPGSDGVPEAWRGMAYGLVMSGYYLTKMISAPWIGFLSDRMGRRQALVVTLLGGALSFLVTKLWGQYSIQGLILCRLLMGCFAANGALMHAYIRDTVPPEWQSSAFSQHSASWGCAYLAAPAL 1029 K +LAA + A+ TLPV+P ++ D G GV WR +G+ + Y L + + AP +G LSDR+GRR L+V+LLG AL++ + Y L+ R L G F ++ ++ A+I DT P E +S F Q A G ++ P L Sbjct: 2 KPVLAAVLCTAALDAMGVALTLPVMPALLG------------DVGL-GVDLGWR---FGVFIGIYALMQFLLAPAVGALSDRLGRRPVLLVSLLGQALAYAALAVAPSYG--WLLAARALAGVFGSSTPVVSAFIADTTPAEERSRRFGQLGACMGVGFIVGPLL 148
BLAST of mRNA_L-elsbetiae_contig624.14837.1 vs. uniprot
Match: A0A1G2F2B9_9BACT (MFS domain-containing protein n=1 Tax=Candidatus Niyogibacteria bacterium RIFCSPLOWO2_12_FULL_41_13 TaxID=1801726 RepID=A0A1G2F2B9_9BACT) HSP 1 Score: 72.0 bits (175), Expect = 1.560e-9 Identity = 46/150 (30.67%), Postives = 73/150 (48.67%), Query Frame = 1 Query: 580 ISYTTTLPVLPFMVNRLIYPRDPEGPDDPGSDGVPEAWRGMAYGLVMSGYYLTKMISAPWIGFLSDRMGRRQALVVTLLGGALSFLVTKLWGQYSIQGLILCRLLMGCFAANGALMHAYIRDTVPPEWQSSAFSQHSASWGCAYLAAPAL 1029 +SY +P LPF + G + GL+ + Y L++ I P+IG LSDR+GRR+ ++ +LLG ALS L ++ L+L R+ G F + + AY+ D P E ++ A A++G ++A PAL Sbjct: 20 LSYGILIPFLPFYAEKF-------------------GGGGFSIGLLFAAYALSQFIFTPFIGRLSDRIGRRRIIIFSLLGEALSLLALVF--AFAYWWLLLVRIFGGIFGSIAGVAQAYLSDITPAEKKTKAMGYFGAAFGAGFIAGPAL 148
BLAST of mRNA_L-elsbetiae_contig624.14837.1 vs. uniprot
Match: A0A7C1W9V9_9BACT (MFS transporter n=1 Tax=Candidatus Fraserbacteria bacterium TaxID=2268184 RepID=A0A7C1W9V9_9BACT) HSP 1 Score: 69.7 bits (169), Expect = 8.200e-9 Identity = 42/113 (37.17%), Postives = 62/113 (54.87%), Query Frame = 1 Query: 709 GLVMSGYYLTKMISAPWIGFLSDRMGRRQALVVTLLGGALSFLVTKLWGQYSIQGLILCRLLMGCFAANGALMHAYIRDTVPPEWQSSAFSQHSASWGCAYLAAPALIAWAGD 1047 GL+M+ Y L + I AP G +SDR+GRR ++++LLG L++ + L S+ L L RLL G F N + AYI D PPE ++ ++G ++ PAL W G Sbjct: 43 GLLMASYSLMQFIFAPIWGQISDRVGRRPIILLSLLGSVLAYTLFGL--ASSLPLLFLARLLAGLFGGNISAAQAYIADITPPEERARGMGLIGMAFGLGFIFGPALGGWLGS 153
BLAST of mRNA_L-elsbetiae_contig624.14837.1 vs. uniprot
Match: A0A522AKY7_9BACT (MFS transporter n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A522AKY7_9BACT) HSP 1 Score: 69.3 bits (168), Expect = 1.170e-8 Identity = 43/125 (34.40%), Postives = 65/125 (52.00%), Query Frame = 1 Query: 697 GMAYGLVMSGYYLTKMISAPWIGFLSDRMGRRQALVVTLLGGALSF----LVTKLWGQYSIQGLILCRLLMGCFAANGALMHAYIRDTVPPEWQSSAFSQHSASWGCAYLAAPALIAWAGD-SAD 1056 G GL+M+ + + I APW G LSDRMGRR L++++ G +++ L T+L G ++ +I R+ G AN + AYI D PPE +S ++G ++ P W G SAD Sbjct: 38 GFELGLLMASFSAMQFIFAPWWGHLSDRMGRRPVLLISIAGSVVAYAWFALATRLTGATALWMIIASRVFAGICGANITVAQAYIADITPPEHRSKRMGLIGMAFGLGFIFGP----WIGGRSAD 158
BLAST of mRNA_L-elsbetiae_contig624.14837.1 vs. uniprot
Match: A7H6K9_ANADF (Major facilitator superfamily MFS_1 n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) TaxID=404589 RepID=A7H6K9_ANADF) HSP 1 Score: 68.9 bits (167), Expect = 1.290e-8 Identity = 46/150 (30.67%), Postives = 75/150 (50.00%), Query Frame = 1 Query: 580 ISYTTTLPVLPFMVNRLIYPRDPEGPDDPGSDGVPEAWRGMAYGLVMSGYYLTKMISAPWIGFLSDRMGRRQALVVTLLGGALSFLVTKLWGQYSIQGLILCRLLMGCFAANGALMHAYIRDTVPPEWQSSAFSQHSASWGCAYLAAPAL 1029 + + +PV+P RL G EAW G L+ +GY + + AP G LSDR+GRR L+V++ A++F + L G +++ L++ RL G AN A+ A++ D PPE ++ A++G ++ PAL Sbjct: 19 LGFGMVIPVMPLYAERL---------------GASEAWTG----LLSAGYSAMQFVFAPIWGRLSDRVGRRPVLLVSIAMTAVAFALYGLAGTFAM--LLVSRLFAGAATANIAIARAFVADVTPPEGRARGMGIIGAAFGLGFVLGPAL 147
BLAST of mRNA_L-elsbetiae_contig624.14837.1 vs. uniprot
Match: A0A1F6C8N1_HANXR (MFS domain-containing protein n=1 Tax=Handelsmanbacteria sp. (strain RIFCSPLOWO2_12_FULL_64_10) TaxID=1817868 RepID=A0A1F6C8N1_HANXR) HSP 1 Score: 68.6 bits (166), Expect = 1.780e-8 Identity = 44/110 (40.00%), Postives = 62/110 (56.36%), Query Frame = 1 Query: 700 MAYGLVMSGYYLTKMISAPWIGFLSDRMGRRQALVVTLLGGALSFLVTKLWGQYSIQGLILCRLLMGCFAANGALMHAYIRDTVPPEWQSSAFSQHSASWGCAYLAAPAL 1029 +A L+ S Y L + + AP G LSDR+GRR LV++L G ALS+L+ L G S+ L RLL G AAN + AYI D PE ++ A++G ++ PA+ Sbjct: 39 LAVTLLSSSYSLMQFLFAPVWGRLSDRVGRRPILVLSLAGSALSYLLFGLAG--SLAALFATRLLAGVCAANISTAQAYIADVTTPETRAKGMGMIGAAFGLGFIFGPAV 146
BLAST of mRNA_L-elsbetiae_contig624.14837.1 vs. uniprot
Match: UPI001F59A106 (MFS transporter n=1 Tax=Anaeromyxobacter sp. SG63 TaxID=2925408 RepID=UPI001F59A106) HSP 1 Score: 68.6 bits (166), Expect = 1.820e-8 Identity = 42/117 (35.90%), Postives = 64/117 (54.70%), Query Frame = 1 Query: 676 GVPEAWRGMAYGLVMSGYYLTKMISAPWIGFLSDRMGRRQALVVTLLGGALSFLVTKLWGQYSIQGLILCRLLMGCFAANGALMHAYIRDTVPPEWQSSAFSQHSASWGCAYLAAPA 1026 G EAW G L+ +GY + + AP G LSDR+GRR L+V++ A +FLV L G +++ L+ RL G AN A+ A++ D PPE ++ A++G ++ PA Sbjct: 36 GASEAWTG----LLSTGYSAMQFVFAPIWGRLSDRVGRRPVLLVSIFMTAAAFLVYGLAGSFAV--LLASRLFAGAATANIAIARAFVADVTPPEGRARGMGLIGAAFGLGFVLGPA 146 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig624.14837.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig624.14837.1 >prot_L-elsbetiae_contig624.14837.1 ID=prot_L-elsbetiae_contig624.14837.1|Name=mRNA_L-elsbetiae_contig624.14837.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=708bp MSTSGRFRSPRPPPPPPDGLRRRIASWAGQEDRPPVAQESWWFPVQPAQPback to top mRNA from alignment at L-elsbetiae_contig624:8433..15263+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig624.14837.1 ID=mRNA_L-elsbetiae_contig624.14837.1|Name=mRNA_L-elsbetiae_contig624.14837.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6831bp|location=Sequence derived from alignment at L-elsbetiae_contig624:8433..15263+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig624:8433..15263+ >mRNA_L-elsbetiae_contig624.14837.1 ID=mRNA_L-elsbetiae_contig624.14837.1|Name=mRNA_L-elsbetiae_contig624.14837.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=4248bp|location=Sequence derived from alignment at L-elsbetiae_contig624:8433..15263+ (Laminarionema elsbetiae ELsaHSoW15)back to top |