mRNA_L-elsbetiae_contig6220.14813.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6220.14813.1 vs. uniprot
Match: UPI001423C659 (sugar phosphate isomerase/epimerase n=1 Tax=Pelagibius litoralis TaxID=374515 RepID=UPI001423C659) HSP 1 Score: 318 bits (814), Expect = 3.740e-108 Identity = 149/152 (98.03%), Postives = 151/152 (99.34%), Query Frame = 1 Query: 13 QGLAKTLDYARGLDMPIAIEPLHPMYAADRACVNTLSQALDLCDDLGAGIGVALDVYHVWWDPDLAAQVKRAGKDRLLGFHICDWLVPTRDMLTDRGMMGDGVIDLPGIRAMAEATGFRGLNEVEIFSAENWWKRDADEVLTEVVARGRDCC 468 +GLAKTLDYARGLDMPIAIEPLHPMYAADRACVNTLSQALDLCDDLGAGIGVALDVYHVWWDPDLAAQVKRAGKDRLLGFHICDWLVPTRDMLTDRGMMGDGVIDLPGIRAM EATGFRGLNEVEIFS+ENWWKRDADEVLTEVVARGRDCC Sbjct: 121 EGLAKTLDYARGLDMPIAIEPLHPMYAADRACVNTLSQALDLCDDLGAGIGVALDVYHVWWDPDLAAQVKRAGKDRLLGFHICDWLVPTRDMLTDRGMMGDGVIDLPGIRAMVEATGFRGLNEVEIFSSENWWKRDADEVLTEVVARGRDCC 272
BLAST of mRNA_L-elsbetiae_contig6220.14813.1 vs. uniprot
Match: UPI001F23EEB2 (sugar phosphate isomerase/epimerase n=1 Tax=Sinorhizobium medicae TaxID=110321 RepID=UPI001F23EEB2) HSP 1 Score: 260 bits (665), Expect = 7.280e-86 Identity = 117/152 (76.97%), Postives = 132/152 (86.84%), Query Frame = 1 Query: 13 QGLAKTLDYARGLDMPIAIEPLHPMYAADRACVNTLSQALDLCDDLGAGIGVALDVYHVWWDPDLAAQVKRAGKDRLLGFHICDWLVPTRDMLTDRGMMGDGVIDLPGIRAMAEATGFRGLNEVEIFSAENWWKRDADEVLTEVVARGRDCC 468 +GLA+TLDYAR +DMPIAIEPLHPMYAADRACVNTL QALD+CD+LG GIGVA+DVYHVWWDPDL Q++RAGK+R+L FHICDWLVPTRD+LTDRGMMGDGV+DL G+RA EA GF GLNEVEIFS NWW RDADEV+ + RGR C Sbjct: 95 EGLAQTLDYARSVDMPIAIEPLHPMYAADRACVNTLRQALDICDELGTGIGVAVDVYHVWWDPDLLPQLRRAGKERILAFHICDWLVPTRDLLTDRGMMGDGVVDLRGLRAAVEAQGFTGLNEVEIFSEHNWWTRDADEVMRTIADRGRAFC 246
BLAST of mRNA_L-elsbetiae_contig6220.14813.1 vs. uniprot
Match: A0A2Z2NTE2_9GAMM (AP_endonuc_2 domain-containing protein n=1 Tax=Granulosicoccus antarcticus IMCC3135 TaxID=1192854 RepID=A0A2Z2NTE2_9GAMM) HSP 1 Score: 261 bits (667), Expect = 8.490e-86 Identity = 117/155 (75.48%), Postives = 133/155 (85.81%), Query Frame = 1 Query: 1 DDAHQGLAKTLDYARGLDMPIAIEPLHPMYAADRACVNTLSQALDLCDDLGAGIGVALDVYHVWWDPDLAAQVKRAGKDRLLGFHICDWLVPTRDMLTDRGMMGDGVIDLPGIRAMAEATGFRGLNEVEIFSAENWWKRDADEVLTEVVARGRDC 465 D QGL+KTLDYAR ++MPIAIEPLHPMYAADRACVNT +QALD+CD LG GIGVALDVYH+WWDPD+ Q+ RAGK+RLL FH+CDWLVPT DML+DRGMMGDGVID+P R++ EA GF GLNEVEIFSAENWWKRD DEVL E++ R R C Sbjct: 118 DIVTQGLSKTLDYARTVNMPIAIEPLHPMYAADRACVNTTAQALDICDQLGTGIGVALDVYHIWWDPDIQTQIARAGKERLLAFHLCDWLVPTTDMLSDRGMMGDGVIDIPHYRSLVEAQGFDGLNEVEIFSAENWWKRDPDEVLQEIINRARQC 272
BLAST of mRNA_L-elsbetiae_contig6220.14813.1 vs. uniprot
Match: A0A1V0GYI7_9RHOB (Endonuclease n=4 Tax=Paracoccus TaxID=265 RepID=A0A1V0GYI7_9RHOB) HSP 1 Score: 261 bits (668), Expect = 1.040e-85 Identity = 118/152 (77.63%), Postives = 132/152 (86.84%), Query Frame = 1 Query: 13 QGLAKTLDYARGLDMPIAIEPLHPMYAADRACVNTLSQALDLCDDLGAGIGVALDVYHVWWDPDLAAQVKRAGKDRLLGFHICDWLVPTRDMLTDRGMMGDGVIDLPGIRAMAEATGFRGLNEVEIFSAENWWKRDADEVLTEVVARGRDCC 468 +GLAKTLDYAR +DMPIAIEPLHPMYAADRACVNTL QALD+CD LG+GIG A+DVYHVWWDPDL Q++RAG++R+L FHICDWLVPTRD+LTDRGMMGDGVIDL G+RA EA F GLNEVEIFS NWWKRD DEVL ++ RGR CC Sbjct: 138 EGLAKTLDYARTVDMPIAIEPLHPMYAADRACVNTLGQALDICDQLGSGIGAAVDVYHVWWDPDLLPQLRRAGQERILAFHICDWLVPTRDLLTDRGMMGDGVIDLRGLRAAVEAESFTGLNEVEIFSELNWWKRDPDEVLQTLIERGRTCC 289
BLAST of mRNA_L-elsbetiae_contig6220.14813.1 vs. uniprot
Match: A0A2N5XN97_9HYPH (Endonuclease n=1 Tax=Cohaesibacter celericrescens TaxID=2067669 RepID=A0A2N5XN97_9HYPH) HSP 1 Score: 260 bits (664), Expect = 2.420e-85 Identity = 118/151 (78.15%), Postives = 130/151 (86.09%), Query Frame = 1 Query: 13 QGLAKTLDYARGLDMPIAIEPLHPMYAADRACVNTLSQALDLCDDLGAGIGVALDVYHVWWDPDLAAQVKRAGKDRLLGFHICDWLVPTRDMLTDRGMMGDGVIDLPGIRAMAEATGFRGLNEVEIFSAENWWKRDADEVLTEVVARGRDC 465 +GLAKTLDYAR MP+AIEPLHPMYAADRAC+NTL QALD+CD+LG GIGVA DVYH+WWDP+LA Q+KRAGK RLL +HICDWLVPT DMLTDRGMMGDGVID+ IR M EA GF GLNEVEIFSA NWWKRDADEV+ +V R RDC Sbjct: 122 EGLAKTLDYARSQKMPVAIEPLHPMYAADRACINTLRQALDVCDELGDGIGVAADVYHIWWDPELADQIKRAGKSRLLAYHICDWLVPTSDMLTDRGMMGDGVIDIAAIRKMVEAEGFCGLNEVEIFSANNWWKRDADEVMRTIVDRARDC 272
BLAST of mRNA_L-elsbetiae_contig6220.14813.1 vs. uniprot
Match: A0A1H9WLK2_9RHOB (Sugar phosphate isomerase/epimerase n=1 Tax=Tranquillimonas rosea TaxID=641238 RepID=A0A1H9WLK2_9RHOB) HSP 1 Score: 260 bits (664), Expect = 2.670e-85 Identity = 116/156 (74.36%), Postives = 134/156 (85.90%), Query Frame = 1 Query: 1 DDAHQGLAKTLDYARGLDMPIAIEPLHPMYAADRACVNTLSQALDLCDDLGAGIGVALDVYHVWWDPDLAAQVKRAGKDRLLGFHICDWLVPTRDMLTDRGMMGDGVIDLPGIRAMAEATGFRGLNEVEIFSAENWWKRDADEVLTEVVARGRDCC 468 + +GLA+TLD+ARG + +AIEPLHPMYAADRACVNT+ ALD+CD LG GIGVA+DVYHVWWDP+L+ Q++RAG+DRL+ FH+CDWLVPTRD+LTDRGMMGDGVIDLPG+R EA GF GLNEVEIFSAENWWKRDADEVL VV RGR C Sbjct: 120 ETVEEGLARTLDHARGAGVKVAIEPLHPMYAADRACVNTMGHALDICDRLGEGIGVAVDVYHVWWDPNLSRQIERAGRDRLMAFHLCDWLVPTRDLLTDRGMMGDGVIDLPGLRRQVEAHGFDGLNEVEIFSAENWWKRDADEVLATVVERGRTAC 275
BLAST of mRNA_L-elsbetiae_contig6220.14813.1 vs. uniprot
Match: A0A848TZP1_9GAMM (Sugar phosphate isomerase/epimerase n=1 Tax=Granulosicoccus sp. TaxID=1943584 RepID=A0A848TZP1_9GAMM) HSP 1 Score: 258 bits (658), Expect = 1.910e-84 Identity = 115/151 (76.16%), Postives = 132/151 (87.42%), Query Frame = 1 Query: 13 QGLAKTLDYARGLDMPIAIEPLHPMYAADRACVNTLSQALDLCDDLGAGIGVALDVYHVWWDPDLAAQVKRAGKDRLLGFHICDWLVPTRDMLTDRGMMGDGVIDLPGIRAMAEATGFRGLNEVEIFSAENWWKRDADEVLTEVVARGRDC 465 +GLA+TL+YAR LDMPIAIEPLHPMYAADRACVNT +QALDLCD LG GIGVALD+YH+WWDPD+ AQ++RAGK RLL FH+CDWLVPT DML+DRGMMGDG+ID+ RAM E +GF GLNEVEIFSAENWWKRD D+VL+E+V R C Sbjct: 121 EGLARTLEYARKLDMPIAIEPLHPMYAADRACVNTTAQALDLCDQLGEGIGVALDLYHIWWDPDIRAQIQRAGKARLLAFHLCDWLVPTTDMLSDRGMMGDGIIDIASYRAMVEDSGFDGLNEVEIFSAENWWKRDPDDVLSEIVRRAEQC 271
BLAST of mRNA_L-elsbetiae_contig6220.14813.1 vs. uniprot
Match: UPI0018EB8A4C (sugar phosphate isomerase/epimerase n=1 Tax=Rhizobium sp. ASV20 TaxID=2795126 RepID=UPI0018EB8A4C) HSP 1 Score: 255 bits (652), Expect = 1.610e-83 Identity = 112/152 (73.68%), Postives = 131/152 (86.18%), Query Frame = 1 Query: 13 QGLAKTLDYARGLDMPIAIEPLHPMYAADRACVNTLSQALDLCDDLGAGIGVALDVYHVWWDPDLAAQVKRAGKDRLLGFHICDWLVPTRDMLTDRGMMGDGVIDLPGIRAMAEATGFRGLNEVEIFSAENWWKRDADEVLTEVVARGRDCC 468 +GLA+TLDYAR +DM +AIEPLHPMYAADRACVNT+ QALD+CD LG GIGVA+DVYHVWWDP L Q+KRAGK+R+L FH+CDWL+PTRD+LTDRGMMGDGVIDL G+R EA GF GLNEVEIFS +NWW+RDAD+V+ + RGR CC Sbjct: 121 EGLARTLDYARTVDMAVAIEPLHPMYAADRACVNTVKQALDICDQLGTGIGVAIDVYHVWWDPALLPQLKRAGKERILAFHLCDWLLPTRDLLTDRGMMGDGVIDLRGLRVAVEAEGFDGLNEVEIFSEQNWWRRDADDVMRVIADRGRSCC 272
BLAST of mRNA_L-elsbetiae_contig6220.14813.1 vs. uniprot
Match: A0A2A5G7D4_9HYPH (Endonuclease n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A2A5G7D4_9HYPH) HSP 1 Score: 254 bits (648), Expect = 6.970e-83 Identity = 114/150 (76.00%), Postives = 128/150 (85.33%), Query Frame = 1 Query: 16 GLAKTLDYARGLDMPIAIEPLHPMYAADRACVNTLSQALDLCDDLGAGIGVALDVYHVWWDPDLAAQVKRAGKDRLLGFHICDWLVPTRDMLTDRGMMGDGVIDLPGIRAMAEATGFRGLNEVEIFSAENWWKRDADEVLTEVVARGRDC 465 GLAKTL+YAR +DM IAIEPLHPMYAADRACVNTL QALD+CD LG IG A+DVYHVWWDPD+ Q+KRAGKDRLL FHICDWLVPT+DMLTDRGMMGDG ID+ +RA EA GF GLNEVEIFSA+NWWK+D D+VL ++ RGR C Sbjct: 125 GLAKTLEYARTVDMKIAIEPLHPMYAADRACVNTLGQALDICDQLGDXIGAAVDVYHVWWDPDILPQIKRAGKDRLLAFHICDWLVPTQDMLTDRGMMGDGAIDIXALRAAVEAEGFNGLNEVEIFSAQNWWKQDPDQVLXTIIERGRGC 274
BLAST of mRNA_L-elsbetiae_contig6220.14813.1 vs. uniprot
Match: A0A2T0RKX8_9RHOB (Sugar phosphate isomerase/epimerase n=1 Tax=Aliiruegeria haliotis TaxID=1280846 RepID=A0A2T0RKX8_9RHOB) HSP 1 Score: 251 bits (642), Expect = 5.500e-82 Identity = 111/152 (73.03%), Postives = 128/152 (84.21%), Query Frame = 1 Query: 13 QGLAKTLDYARGLDMPIAIEPLHPMYAADRACVNTLSQALDLCDDLGAGIGVALDVYHVWWDPDLAAQVKRAGKDRLLGFHICDWLVPTRDMLTDRGMMGDGVIDLPGIRAMAEATGFRGLNEVEIFSAENWWKRDADEVLTEVVARGRDCC 468 +GLA TL+YARG+ +P+AIEPLHP YA DRACVNT SQALD+CD LG GIGVALDVYH+WWDP++ Q+ RAGK+RLL FHICDWLVPT+D+L DRGMMGDGV D+P +RA EA GF GLNEVEIFSAE WWKRD D+VL +VARG CC Sbjct: 122 EGLAATLEYARGVGVPVAIEPLHPAYAGDRACVNTTSQALDICDRLGDGIGVALDVYHIWWDPEIRRQIARAGKERLLAFHICDWLVPTQDILEDRGMMGDGVADIPALRAEVEAAGFTGLNEVEIFSAETWWKRDPDDVLKTIVARGESCC 273 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6220.14813.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6220.14813.1 >prot_L-elsbetiae_contig6220.14813.1 ID=prot_L-elsbetiae_contig6220.14813.1|Name=mRNA_L-elsbetiae_contig6220.14813.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=157bp DDAHQGLAKTLDYARGLDMPIAIEPLHPMYAADRACVNTLSQALDLCDDLback to top mRNA from alignment at L-elsbetiae_contig6220:759..1229- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6220.14813.1 ID=mRNA_L-elsbetiae_contig6220.14813.1|Name=mRNA_L-elsbetiae_contig6220.14813.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=471bp|location=Sequence derived from alignment at L-elsbetiae_contig6220:759..1229- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6220:759..1229- >mRNA_L-elsbetiae_contig6220.14813.1 ID=mRNA_L-elsbetiae_contig6220.14813.1|Name=mRNA_L-elsbetiae_contig6220.14813.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=942bp|location=Sequence derived from alignment at L-elsbetiae_contig6220:759..1229- (Laminarionema elsbetiae ELsaHSoW15)back to top |