mRNA_L-elsbetiae_contig6209.14797.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6209.14797.1 vs. uniprot
Match: A0A835YY77_9STRA (Cytochrome c biogenesis protein, thiol reduction transmembrane region, CcdA n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY77_9STRA) HSP 1 Score: 282 bits (721), Expect = 3.990e-90 Identity = 161/234 (68.80%), Postives = 180/234 (76.92%), Query Frame = 3 Query: 36 MYGTGLLMSLSPCALSLLPLTISYIAGSEAEGAAEEATEGREMGGFESLKGGFIPSAAFAAGLATVLSLLGLSATYAGKVMGSSATFGGELGSTVLPLLASAFAVAMGLNVLELVKLDLPSFEGGLEYMTSLPKNARAYLLGASSALVASPCCTPVLASILGFIASSQDPALGLVLLLTYSAGYTTPLMAAGTASGVLSRLMTAKGLNWITPASGALLISYGTYNGLSAIFGSA 737 MYGTGLLMS SPCALSLLPLTI YI G+E EG E GG + F+PSAAFA GLATVLS+LGLSATYAGK+ GS+ GG+ G LPL++S A+A GLN+LEL+ LPS+E G+E SLP+ RAY LGASSALVASPCCTPVLASILGF+ASSQDPALGL LLL YS GYTTPLMAAGTASG LSR+M+A GL WITP S A LISYGT+ GL AIF SA Sbjct: 1 MYGTGLLMSFSPCALSLLPLTIGYIIGTEKEG---------EEGGSSNA---FLPSAAFAGGLATVLSVLGLSATYAGKLFGSTG-LGGDTGGLALPLVSSVIAIAAGLNLLELLNFTLPSWEAGVESFNSLPRVGRAYALGASSALVASPCCTPVLASILGFVASSQDPALGLALLLAYSLGYTTPLMAAGTASGALSRIMSASGLTWITPVSAAALISYGTFTGLGAIFDSA 221
BLAST of mRNA_L-elsbetiae_contig6209.14797.1 vs. uniprot
Match: A0A4D9CLR8_9STRA (DsbD domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CLR8_9STRA) HSP 1 Score: 211 bits (537), Expect = 2.550e-60 Identity = 126/244 (51.64%), Postives = 169/244 (69.26%), Query Frame = 3 Query: 3 LTHVSPVTIGVMYGTGLLMSLSPCALSLLPLTISYIAGSEAEGAAEEATEGREMGGFESLKGGFIPSAAFAAGLATVLSLLGLSATYAGKVMGSSATFGGELGSTVLPLLASAFAVAMGLNVLELVKLDLPSFEGGLEYMTSLPKNARAYLLGASSALVASPCCTPVLASILGFIASSQDPALGLVLLLTYSAGYTTPLMAAGTASGVLSRLMTAKG--LNWITPASGALLISYGTYNGLSAIF 728 LTH++PV+ V+YG GLL SLSPCALSL+PLT++Y+ + A ++ T +A F GLAT LS+LGLSAT AGK+ GS+ G LG+ LPL ASA A+ MGLN+L+LV L LPSF+ L+ + P + +A+LLGA+SAL+ASPC TPVLASILGF+A+S +P LG LL +YS GY+TPL+ AG SG ++ + +G +W+TPA+GALLISYGTY+ L+ +F Sbjct: 166 LTHLTPVSGAVLYGAGLLTSLSPCALSLVPLTMAYLTDDGTDPARDQRTL-------------LFRAATFTVGLATSLSVLGLSATLAGKLFGSAGA--GALGAA-LPLTASAVAIVMGLNLLDLVSLRLPSFDAALQ-LERFPPSLQAFLLGATSALIASPCSTPVLASILGFVAASGEPYLGAGLLFSYSLGYSTPLLLAGLLSGTVTSFIAKRGDGFSWVTPATGALLISYGTYSSLATLF 392
BLAST of mRNA_L-elsbetiae_contig6209.14797.1 vs. uniprot
Match: A0A0G4H6S3_VITBC (DsbD domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4H6S3_VITBC) HSP 1 Score: 188 bits (477), Expect = 1.180e-52 Identity = 116/249 (46.59%), Postives = 165/249 (66.27%), Query Frame = 3 Query: 3 LTHVSPVTIGVMYGTGLLMSLSPCALSLLPLTISYIAGSEAEGAAEEATEGREMGGFESLKGGFIPSAAFAAGLATVLSLLGLSATYAGKVMGSSATFGGELGST--VLPLLASAFAVAMGLNVLELVKLDLPSFEGG-LEYMTSLPKNARAYLLGASSALVASPCCTPVLASILGFIASSQDPALGLVLLLTYSAGYTTPLMAAGTASGVLSRLMTA----KGLNWITPASGALLISYGTYNGLSAIF 728 L+H++PV++ V+Y +GL+ SLSPCALSLLPLTI+Y+AG ++ ++ + + SL FAAGLAT LS LGL A+ G + FG G ++P+ AS AV MGLNVL LV + P+F+GG L+ LPK + +L G +SAL+A+PC TPVL ++LG++AS+ DP LG LL Y+ GY +P++AAGTASG L++L+T +GL WITP +G LL+ YGT++ L+A+F Sbjct: 61 LSHLTPVSLAVLYLSGLVTSLSPCALSLLPLTIAYLAG-DSSTPTDDPSRPPPIPLSSSLM--------FAAGLATALSSLGLGASLLGMGL-----FGQTSGPAERIVPVAASVLAVVMGLNVLNLVSISFPAFDGGELDEGRKLPKALQDFLFGVTSALIATPCSTPVLTALLGYVASTGDPLLGAALLFAYTLGYASPVVAAGTASGRLAQLLTQGEGREGLRWITPVTGGLLVGYGTFSTLNALF 295
BLAST of mRNA_L-elsbetiae_contig6209.14797.1 vs. uniprot
Match: B4VM33_9CYAN (Cytochrome C biogenesis protein transmembrane region n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 TaxID=118168 RepID=B4VM33_9CYAN) HSP 1 Score: 181 bits (459), Expect = 1.250e-50 Identity = 114/245 (46.53%), Postives = 161/245 (65.71%), Query Frame = 3 Query: 3 LTHVSPVTIGVMYGTGLLMSLSPCALSLLPLTISYIAGSEAEGAAEEATEGREMGGFESLKGGFIPSAAFAAGLATVLSLLGLSATYAGKVMGSSATFGGELGSTVLPLLASAFAVAMGLNVLELVKLDLPSFEGGLEYMT-SLPKNARAYLLGASSALVASPCCTPVLASILGFIASSQDPALGLVLLLTYSAGYTTPLMAAGTASGVLSRLMTAKGLN-WITPASGALLISYGTYNGLSAIFG 731 LTH+S ++IG+++ GLL SL+PC LS+LP+TI YI G EA+G + AT+ S FA GLAT L+ LG+ A G+V G ++G LP++ S A+ MGLN+LE + L LPSF GG+E+++ LPK R+YL+G + LVASPC TPVLA++L ++AS+QD LG VLLL+Y+AGY TPL+ AGT + + +L+ + + WITP SGALL+ +G ++ LS I G Sbjct: 24 LTHLSALSIGIIFAAGLLTSLTPCMLSMLPITIGYIGGYEAKGRLQAATQ----------------STWFALGLATTLAGLGILAASVGRVYG-------QVGIG-LPIIVSLIAIIMGLNLLEALPLQLPSF-GGMEWISPDLPKGIRSYLIGLTFGLVASPCSTPVLATLLAWVASTQDWVLGGVLLLSYTAGYVTPLIVAGTFTASIKKLLEVRQWSSWITPVSGALLVGFGVFSLLSRIPG 243
BLAST of mRNA_L-elsbetiae_contig6209.14797.1 vs. uniprot
Match: UPI0019F72B38 (Sulfite exporter TauE/SafE family protein n=1 Tax=Synechococcales cyanobacterium C42_A2020_086 TaxID=2774344 RepID=UPI0019F72B38) HSP 1 Score: 179 bits (453), Expect = 9.820e-50 Identity = 113/244 (46.31%), Postives = 159/244 (65.16%), Query Frame = 3 Query: 3 LTHVSPVTIGVMYGTGLLMSLSPCALSLLPLTISYIAGSEAEGAAEEATEGREMGGFESLKGGFIPSAAFAAGLATVLSLLGLSATYAGKVMGSSATFGGELGSTVLPLLASAFAVAMGLNVLELVKLDLPSFEGGLEYM-TSLPKNARAYLLGASSALVASPCCTPVLASILGFIASSQDPALGLVLLLTYSAGYTTPLMAAGTASGVLSRLMTAKGLN-WITPASGALLISYGTYNGLSAIF 728 LTH+S V+IGV++ GLL SL+PC LS+LP+TI YI G E + + A + S FA GLAT L+ LG++AT GKV G LG LP++ SA A+ MGLN+LE+V L LPS+ GG++++ T LP+ R+Y +G + LVASPC TPVLA++L +++++QDP LG VLLL Y+AGY PL+ AGT + + +L+ + + WITPASGALLI +G ++ L +F Sbjct: 24 LTHLSLVSIGVIFLAGLLTSLTPCMLSMLPITIGYIGGYETKTRLQAAVQ----------------STWFALGLATTLAALGIAATVVGKVYGQVG-----LG---LPIVVSAIAILMGLNLLEIVPLRLPSW-GGMDWISTDLPEGVRSYFIGLTFGLVASPCSTPVLATLLAWVSTTQDPLLGSVLLLAYTAGYVAPLILAGTFTASIKKLLELRRWSGWITPASGALLIGFGVFSLLFRLF 242
BLAST of mRNA_L-elsbetiae_contig6209.14797.1 vs. uniprot
Match: A0A8J7FT87_9CYAN (Sulfite exporter TauE/SafE family protein n=2 Tax=Pseudanabaenales TaxID=2881377 RepID=A0A8J7FT87_9CYAN) HSP 1 Score: 177 bits (450), Expect = 2.720e-49 Identity = 108/244 (44.26%), Postives = 162/244 (66.39%), Query Frame = 3 Query: 3 LTHVSPVTIGVMYGTGLLMSLSPCALSLLPLTISYIAGSEAEGAAEEATEGREMGGFESLKGGFIPSAAFAAGLATVLSLLGLSATYAGKVMGSSATFGGELGSTVLPLLASAFAVAMGLNVLELVKLDLPSFEGGLEYMTS-LPKNARAYLLGASSALVASPCCTPVLASILGFIASSQDPALGLVLLLTYSAGYTTPLMAAGTASGVLSRLMTAKGLN-WITPASGALLISYGTYNGLSAIF 728 LTH++P+++G+++G GLL SL+PC LS+LP+TI YI G EA+ + A I S FA GLAT L+ LG++A GKV G ++G LP++ S A+ MGLN+LE + L LP++ GG+E++++ LP+ R+YL+G + LVASPC TPVLA++L +I+++QDPALG VLLL Y+ GY PL+ AGT + + +++ + + WITPASGALL+ +G ++ L +F Sbjct: 24 LTHLTPLSVGIIFGAGLLTSLTPCMLSMLPITIGYIGGYEAKTRWQAA----------------IQSTWFALGLATTLAGLGIAAAIVGKVYG-------QVGIG-LPIVVSVIAILMGLNLLEALPLRLPAW-GGMEWISNDLPEGVRSYLIGLTFGLVASPCSTPVLATLLAWISTTQDPALGSVLLLAYATGYVAPLILAGTFTASIKKILEVRRWSGWITPASGALLVGFGVFSLLFRLF 242
BLAST of mRNA_L-elsbetiae_contig6209.14797.1 vs. uniprot
Match: C1E9C4_MICCC (DsbD domain-containing protein n=2 Tax=Micromonas TaxID=38832 RepID=C1E9C4_MICCC) HSP 1 Score: 177 bits (448), Expect = 1.990e-48 Identity = 115/252 (45.63%), Postives = 156/252 (61.90%), Query Frame = 3 Query: 3 LTHVSPVTIGVMYGTGLLMSLSPCALSLLPLTISYIAG----SEAEGAAEEATEGREMGGFESLKGG-----FIPSAAFAAGLATVLSLLGLSATYAGKVMGSSATFGGELGSTVLPLLASAFAVAMGLNVLELVKLDLPSFEGGLEYMT-SLPKNARAYLLGASSALVASPCCTPVLASILGFIASSQDPALGLVLLLTYSAGYTTPLMAAGTASGVLSRLMTAKGLN-WITPASGALLISYGTYNGLSAI 725 L +V+P+T V+ GL+ SLSPC LS+LPLTI YI G EAE E+ TE E++ + AFAAGLA+ L+ LG+ A AGK G GG+ +LP+ S AVAMGLN+LE++ + PSF + SLP A+AYL G + AL ASPC TPVLA++L +++S+ DP G LLLTY++GY PL+AA TA+G L R+M+A+ W+TPASG +L++ GTY LS + Sbjct: 38 LENVTPITFAVVLVAGLVTSLSPCTLSVLPLTIGYIGGYAGPKEAEQGPEDETEEARARRLEAVAKAKADALLVNGFAFAAGLASTLAALGVGAATAGKAYGQ---VGGD--GPILPIAVSVLAVAMGLNLLEVIVVQFPSFGTDFDARKMSLPPPAQAYLAGLAFALAASPCSTPVLATLLAYVSSTGDPVTGGALLLTYTSGYVAPLLAAATATGSLGRIMSARQYTAWVTPASGLMLVAGGTYGFLSRV 284
BLAST of mRNA_L-elsbetiae_contig6209.14797.1 vs. uniprot
Match: R1BZD3_EMIHU (DsbD domain-containing protein (Fragment) n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1BZD3_EMIHU) HSP 1 Score: 174 bits (442), Expect = 2.950e-48 Identity = 115/243 (47.33%), Postives = 153/243 (62.96%), Query Frame = 3 Query: 3 LTHVSPVTIGVMYGTGLLMSLSPCALSLLPLTISYIAGSEAEGAAEEATEGREMGGFESLKGGFIPSAAFAAGLATVLSLLGLSATYAGKVMGS---SATFGGELGSTVLPLLASAFAVAMGLNVLELVKLDLPSFE---GGLEYMTSLPKNARAYLLGASSALVASPCCTPVLASILGFIASSQDPALGLVLLLTYSAGYTTPLMAAGTASGVLSRLMTA-KGLNWITPASGALLISYGTYN 710 LT +SPV+ V+YG GLL SL+PC LS+LPLT+SYI G+ +E F S AFA GLA LS LG++A AG ++GS SA+F L LL S +GLN+L+++ +LPS E GG+ SLP+ ARA+L GASSALVASPC +PVL S+LGF+A+ DP LG LL YS G TTP++ AG A+G +R+++A + W+TPASG+ L++ GTYN Sbjct: 8 LTSLSPVSALVLYGAGLLTSLTPCCLSMLPLTMSYIGS----GSFDEGXXXXXXXXXXXXXXSFGASLAFAGGLACSLSALGVAAASAGAMLGSGTESASF------AALRLLVSLLTCVLGLNLLKVLPFELPSLELSTGGV----SLPRPARAFLFGASSALVASPCASPVLVSLLGFVATQGDPLLGAALLTAYSLGETTPVLLAGIAAGSATRIVSAQRRFEWVTPASGSALLAIGTYN 236
BLAST of mRNA_L-elsbetiae_contig6209.14797.1 vs. uniprot
Match: UPI001ABADE57 (sulfite exporter TauE/SafE family protein n=1 Tax=Aetokthonos hydrillicola TaxID=1550245 RepID=UPI001ABADE57) HSP 1 Score: 174 bits (442), Expect = 3.960e-48 Identity = 110/243 (45.27%), Postives = 156/243 (64.20%), Query Frame = 3 Query: 3 LTHVSPVTIGVMYGTGLLMSLSPCALSLLPLTISYIAGSEAEGAAEEATEGREMGGFESLKGGFIPSAAFAAGLATVLSLLGLSATYAGKVMGSSATFGGELGSTVLPLLASAFAVAMGLNVLELVKLDLPSFEGGLEYMTS-LPKNARAYLLGASSALVASPCCTPVLASILGFIASSQDPALGLVLLLTYSAGYTTPLMAAGTASGVLSRLMTAKGLN-WITPASGALLISYGTYNGLSAI 725 LTH+S +++ +++G GLL SL+PC LS+LP+TI YI G EAE + A + S FA GLAT L+ LG+ A + GKV G ++G LP++ S A+ MGLN+LE + L LP+ GG+E+++ LPK RAY LG S LVASPC TPVLAS+LG++A++QD LG VLLL+Y+AGY PL+ AGT + + +L+ + + WI P SGALL+ +G ++ +S I Sbjct: 24 LTHISWLSVVIIFGAGLLTSLTPCMLSMLPITIGYIGGYEAENRLQAAAQ----------------STWFALGLATTLAGLGIIAAFVGKVYG-------QVG-VGLPIIVSILAILMGLNLLEALPLQLPA-TGGIEWISQELPKELRAYSLGLSFGLVASPCSTPVLASLLGWVANTQDLILGAVLLLSYTAGYVAPLILAGTFTASIKKLLELRRWSAWINPVSGALLVGFGVFSLISRI 241
BLAST of mRNA_L-elsbetiae_contig6209.14797.1 vs. uniprot
Match: A0A0S3U077_9CYAN (Cytochrome C biogenesis protein, transmembrane region n=5 Tax=Cyanobacteria TaxID=1117 RepID=A0A0S3U077_9CYAN) HSP 1 Score: 174 bits (440), Expect = 7.140e-48 Identity = 110/241 (45.64%), Postives = 154/241 (63.90%), Query Frame = 3 Query: 3 LTHVSPVTIGVMYGTGLLMSLSPCALSLLPLTISYIAGSEAEGAAEEATEGREMGGFESLKGGFIPSAAFAAGLATVLSLLGLSATYAGKVMGSSATFGGELGSTVLPLLASAFAVAMGLNVLELVKLDLPSFEGGLEYMTS-LPKNARAYLLGASSALVASPCCTPVLASILGFIASSQDPALGLVLLLTYSAGYTTPLMAAGTASGVLSRLMTAKGLN-WITPASGALLISYGTYNGLS 719 L H++PV+IGV++ GLL SL+PC LS+LP+TI YI G EA+ + A + S F+ GLAT L+ LG+ AT GKV G ++G T LP++ S A+ MGLN+LE + +PS GG E++++ LP R+YLLG + LVASPC TPVLA+IL +IAS+ DP LG LLL Y+AGY PL+ AGT + + +L+ + + WITPASGALL+ +G ++ +S Sbjct: 24 LAHITPVSIGVIFAAGLLTSLTPCTLSMLPITIGYIGGYEAKSRLQAAAQ----------------STWFSLGLATTLAGLGIGATLLGKVYG-------QVG-TGLPIVVSVVAILMGLNLLEALPFAMPSI-GGTEWISNELPAGVRSYLLGVTFGLVASPCSTPVLATILAWIASTGDPILGGSLLLCYTAGYVAPLILAGTFTAAIKKLLELRRWSAWITPASGALLVGFGVFSLMS 239 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6209.14797.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6209.14797.1 >prot_L-elsbetiae_contig6209.14797.1 ID=prot_L-elsbetiae_contig6209.14797.1|Name=mRNA_L-elsbetiae_contig6209.14797.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=235bp MYGTGLLMSLSPCALSLLPLTISYIAGSEAEGAAEEATEGREMGGFESLKback to top mRNA from alignment at L-elsbetiae_contig6209:8004..10178- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6209.14797.1 ID=mRNA_L-elsbetiae_contig6209.14797.1|Name=mRNA_L-elsbetiae_contig6209.14797.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2175bp|location=Sequence derived from alignment at L-elsbetiae_contig6209:8004..10178- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6209:8004..10178- >mRNA_L-elsbetiae_contig6209.14797.1 ID=mRNA_L-elsbetiae_contig6209.14797.1|Name=mRNA_L-elsbetiae_contig6209.14797.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1410bp|location=Sequence derived from alignment at L-elsbetiae_contig6209:8004..10178- (Laminarionema elsbetiae ELsaHSoW15)back to top |