mRNA_L-elsbetiae_contig6209.14796.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig6209.14796.1
Unique NamemRNA_L-elsbetiae_contig6209.14796.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig6209.14796.1 vs. uniprot
Match: A0A6H5KV08_9PHAE (cobW domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KV08_9PHAE)

HSP 1 Score: 436 bits (1120), Expect = 6.780e-152
Identity = 223/250 (89.20%), Postives = 229/250 (91.60%), Query Frame = 2 
Query:  161 HGNEEPSASTQNTGFEEHXXXXEHMDHPGFFADREPPQPHRALSERAYTVGIGGPVGSGKTALMLELCKLLRDELSIGAVTNDIFTREDAEFLTKNSALEEGRILAIETGGCPHAAIREDISANLGACETLTARHNADIVLVESGGDNLAANYSRELADYIIYVIDVAGGDKVPRKGGPGITQSDLLVVNKTDLAEAVGADLEVMRREAKVMRGEGDTIFAQVKKGDGVQEIKTLILAGYEAIKAAAAST 910
            HG EE  A +QN  F EH    EHMDHPGFFADREPPQP RAL+ER+YTVGIGGPVGSGKTALMLELCKLLRDELSIGAVTNDIFTREDAEFLTKNSALEEGRILAIETGGCPHAAIREDISANLGACETLTARH  DI+LVESGGDNLAANYSRELADYIIYVIDVAGGDKVPRKGGPGITQSDLLV+NKTDLAEAVGADLEVMRREAKVMRGEGDTIFAQVKKG GV EIK LIL  YEA K +AAST
Sbjct:   30 HGKEEHPADSQNPTFAEHGHTHEHMDHPGFFADREPPQPDRALAERSYTVGIGGPVGSGKTALMLELCKLLRDELSIGAVTNDIFTREDAEFLTKNSALEEGRILAIETGGCPHAAIREDISANLGACETLTARHETDIILVESGGDNLAANYSRELADYIIYVIDVAGGDKVPRKGGPGITQSDLLVINKTDLAEAVGADLEVMRREAKVMRGEGDTIFAQVKKGVGVGEIKALILKHYEAAKDSAAST 279
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BLAST of mRNA_L-elsbetiae_contig6209.14796.1 vs. uniprot
Match: A0A836CD81_9STRA (Urease accessory protein ureG n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CD81_9STRA)

HSP 1 Score: 332 bits (852), Expect = 4.130e-111
Identity = 167/218 (76.61%), Postives = 186/218 (85.32%), Query Frame = 2 
Query:  230 HMDHPGFFADREPPQPHRALSERAYTVGIGGPVGSGKTALMLELCKLLRDELSIGAVTNDIFTREDAEFLTKNSALEEGRILAIETGGCPHAAIREDISANLGACETLTARHNADIVLVESGGDNLAANYSRELADYIIYVIDVAGGDKVPRKGGPGITQSDLLVVNKTDLAEAVGADLEVMRREAKVMRGEGDTIFAQVKKGDGVQEIKTLILAGYE 883
            H++H G F +REPP   R L +RA+TVGIGGPVGSGKTALMLELCK LRD  SI AVTNDIFTREDAEFLT+N+AL E RI AIETGGCPHAAIREDISANL ACE +T RH  DIVLVESGGDNLAANYSRELADYIIYVIDVAGGDKVPRKGGPGITQSDL V+NK DLA+AVGADL VMRR++ +MRG+G T+FAQVK G GV +I   IL+ ++
Sbjct:   49 HLEHAGCFHEREPPLNSRDLKDRAFTVGIGGPVGSGKTALMLELCKRLRDNYSIAAVTNDIFTREDAEFLTRNAALAEDRIAAIETGGCPHAAIREDISANLSACEIMTTRHACDIVLVESGGDNLAANYSRELADYIIYVIDVAGGDKVPRKGGPGITQSDLFVINKIDLADAVGADLAVMRRDSLLMRGDGPTVFAQVKHGVGVDDIVKYILSDHK 266
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BLAST of mRNA_L-elsbetiae_contig6209.14796.1 vs. uniprot
Match: A0A261Y2A4_9FUNG (Putative urease accessory protein ureG-like n=1 Tax=Bifiguratus adelaidae TaxID=1938954 RepID=A0A261Y2A4_9FUNG)

HSP 1 Score: 319 bits (817), Expect = 5.800e-106
Identity = 164/232 (70.69%), Postives = 188/232 (81.03%), Query Frame = 2 
Query:  206 EEHXXXXEHMDHPGFFADREPPQ-PHRALSERAYTVGIGGPVGSGKTALMLELCKLLRDELSIGAVTNDIFTREDAEFLTKNSALEEGRILAIETGGCPHAAIREDISANLGACETLTARHNADIVLVESGGDNLAANYSRELADYIIYVIDVAGGDKVPRKGGPGITQSDLLVVNKTDLAEAVGADLEVMRREAKVMRGEGDTIFAQVKKGDGVQEIKTLILAGYEAIKAA 898
            +EH    E +DHPGF+A+R P     R+  ERA+TVGIGGPVGSGKTALML LC+ LR++ SI AVTNDIFT+ED EFL +N AL E RI AIETGGCPHAAIRED+SANL A E L A+ N  ++L+ESGGDNLAANYSRELADYIIYVIDVAGGDKVPRKGGPGITQSDLL++NKTDLA+ VGADL VM R+AK MRG G T+FAQVK G GV EI +LIL  ++A  AA
Sbjct:   37 QEHGHTHEQLDHPGFYAERPPVNYGDRSWRERAFTVGIGGPVGSGKTALMLALCQRLREQYSIAAVTNDIFTKEDTEFLIRNKALPEERIAAIETGGCPHAAIREDVSANLNALEKLHAKFNTQLLLIESGGDNLAANYSRELADYIIYVIDVAGGDKVPRKGGPGITQSDLLIINKTDLADIVGADLSVMDRDAKKMRGSGPTVFAQVKNGVGVDEIISLILGEWKASGAA 268
[Close]
BLAST of mRNA_L-elsbetiae_contig6209.14796.1 vs. uniprot
Match: A0A1Y1XY18_9FUNG (Urease accessory protein UreG n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1XY18_9FUNG)

HSP 1 Score: 318 bits (815), Expect = 1.050e-105
Identity = 163/228 (71.49%), Postives = 185/228 (81.14%), Query Frame = 2 
Query:  227 EHMDHPGFFADREPPQPHRA-LSERAYTVGIGGPVGSGKTALMLELCKLLRDELSIGAVTNDIFTREDAEFLTKNSALEEGRILAIETGGCPHAAIREDISANLGACETLTARHNADIVLVESGGDNLAANYSRELADYIIYVIDVAGGDKVPRKGGPGITQSDLLVVNKTDLAEAVGADLEVMRREAKVMRGEGDTIFAQVKKGDGVQEIKTLILAGYEAIKAAAAS 907
            E +DHPG F  R+PPQ HR   SERA+TVGIGGPVGSGKTALML LC+ LR+  +I  VTNDIFT+ED EFL +N AL   RI AIETGGCPHAAIRED+SAN+ A E L A+ N +++L+ESGGDNLAANYSRELADYIIYVIDVAGGDKVPRKGGPGITQSDLLV+NKTDLA  VGADL+VM R+AK MR +G T+FAQVK G G+QEI   ILA +E   A AAS
Sbjct:   39 EQLDHPGKFNQRDPPQYHRRDWSERAFTVGIGGPVGSGKTALMLSLCRALRESYNIACVTNDIFTKEDTEFLVRNEALPRERIRAIETGGCPHAAIREDVSANMNALEELHAQFNCELLLIESGGDNLAANYSRELADYIIYVIDVAGGDKVPRKGGPGITQSDLLVINKTDLAPIVGADLDVMARDAKKMRDDGPTVFAQVKNGPGLQEIIQHILAAWETSGAKAAS 266
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BLAST of mRNA_L-elsbetiae_contig6209.14796.1 vs. uniprot
Match: A0A162U528_PHYB8 (cobW domain-containing protein n=1 Tax=Phycomyces blakesleeanus (strain ATCC 8743b / DSM 1359 / FGSC 10004 / NBRC 33097 / NRRL 1555) TaxID=763407 RepID=A0A162U528_PHYB8)

HSP 1 Score: 318 bits (815), Expect = 1.430e-105
Identity = 168/249 (67.47%), Postives = 190/249 (76.31%), Query Frame = 2 
Query:  155 VTHGNEEPSASTQNTGFEEHXXXXEHMDHPGFFADREPP-QPHRALSERAYTVGIGGPVGSGKTALMLELCKLLRDELSIGAVTNDIFTREDAEFLTKNSALEEGRILAIETGGCPHAAIREDISANLGACETLTARHNADIVLVESGGDNLAANYSRELADYIIYVIDVAGGDKVPRKGGPGITQSDLLVVNKTDLAEAVGADLEVMRREAKVMRGEGDTIFAQVKKGDGVQEIKTLILAGYEAIKAA 898
             +HG+E     TQ     EH    E MDHPG +A+R      HR  SERA+TVGIGGPVGSGKTALML LC+ LR++ S+ AVTNDIFT+ED EFL +  AL E RI+AIETGGCPHAAIRED+SANL A E L A+ N  ++L+ESGGDNLAANYSRELADYIIYVIDVAGGDKVPRKGGPGITQSDLLVVNKTDLAE +GADL VM R+AK MRG G T+FAQVK G  V +I  LIL  + A  AA
Sbjct:   31 ASHGHEHGGRGTQ-----EHGHTHEQMDHPGHYAERPKAIYNHRDWSERAFTVGIGGPVGSGKTALMLALCQRLREKYSVAAVTNDIFTKEDTEFLVREKALPEERIMAIETGGCPHAAIREDVSANLNALEVLHAKFNTQLLLIESGGDNLAANYSRELADYIIYVIDVAGGDKVPRKGGPGITQSDLLVVNKTDLAEIIGADLGVMARDAKKMRGNGPTVFAQVKNGVAVDDIINLILGEWRASGAA 274
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BLAST of mRNA_L-elsbetiae_contig6209.14796.1 vs. uniprot
Match: A0A397UXJ6_9GLOM (CobW/HypB/UreG, nucleotide-binding domain-containing protein n=1 Tax=Gigaspora rosea TaxID=44941 RepID=A0A397UXJ6_9GLOM)

HSP 1 Score: 314 bits (804), Expect = 2.480e-104
Identity = 162/221 (73.30%), Postives = 183/221 (82.81%), Query Frame = 2 
Query:  227 EHMDHPGFFADREPPQ-PHRALSERAYTVGIGGPVGSGKTALMLELCKLLRDELSIGAVTNDIFTREDAEFLTKNSALEEGRILAIETGGCPHAAIREDISANLGACETLTARHNADIVLVESGGDNLAANYSRELADYIIYVIDVAGGDKVPRKGGPGITQSDLLVVNKTDLAEAVGADLEVMRREAKVMRGEGDTIFAQVKKGDGVQEIKTLILAGYEA 886
            E +DHPG F +R+ P+  +R  +ERA+TVGIGGPVGSGKTALML LC+ LRD  SI AVTNDIFTRED EFL +N+AL   RI AIETGGCPHAAIREDISANL A E L A+ NA ++LVESGGDNLAANYSRELADYIIYVIDVAGGDKVPRKGGPGITQSDLL++NKTDLAE VGADL VM R+A+ MR  G TIFAQVK G G+ EI  LIL+ ++A
Sbjct:   24 EQLDHPGKFTERDLPKYTNRNWTERAFTVGIGGPVGSGKTALMLALCRALRDNYSIAAVTNDIFTREDTEFLVRNNALPSERIRAIETGGCPHAAIREDISANLNALEELHAKFNAQLLLVESGGDNLAANYSRELADYIIYVIDVAGGDKVPRKGGPGITQSDLLIINKTDLAEIVGADLGVMERDARKMRDTGPTIFAQVKNGVGIPEIVNLILSAWQA 244
[Close]
BLAST of mRNA_L-elsbetiae_contig6209.14796.1 vs. uniprot
Match: A0A1X2G8T7_9FUNG (Urease accessory protein UreG n=1 Tax=Hesseltinella vesiculosa TaxID=101127 RepID=A0A1X2G8T7_9FUNG)

HSP 1 Score: 311 bits (798), Expect = 3.990e-103
Identity = 161/225 (71.56%), Postives = 182/225 (80.89%), Query Frame = 2 
Query:  227 EHMDHPGFFADREPPQPH-RALSERAYTVGIGGPVGSGKTALMLELCKLLRDELSIGAVTNDIFTREDAEFLTKNSALEEGRILAIETGGCPHAAIREDISANLGACETLTARHNADIVLVESGGDNLAANYSRELADYIIYVIDVAGGDKVPRKGGPGITQSDLLVVNKTDLAEAVGADLEVMRREAKVMRGEGDTIFAQVKKGDGVQEIKTLILAGYEAIKAA 898
            E +DHPG + +R  P+   R  SERA+TVGIGGPVGSGKTALML LC+ LRD  SI AVTNDIFT+ED EFL +N AL E RI AIETGGCPHAAIRED+SAN+ A E L A+ N  ++L+ESGGDNLAANYSRELADYIIYVIDVAGGDKVPRKGGPGITQSDLLV+NKTDLAE VGADL+VM R+AK MRG G T+FAQVK   G+ EI +LIL  + A  AA
Sbjct:   41 EDLDHPGLYEERPKPEYRDRDWSERAFTVGIGGPVGSGKTALMLALCQRLRDTYSIAAVTNDIFTKEDTEFLVRNKALPEERISAIETGGCPHAAIREDVSANMNALEVLHAKFNTQLLLIESGGDNLAANYSRELADYIIYVIDVAGGDKVPRKGGPGITQSDLLVINKTDLAEIVGADLDVMARDAKKMRGNGPTVFAQVKNDVGMDEIISLILGEWRASGAA 265
[Close]
BLAST of mRNA_L-elsbetiae_contig6209.14796.1 vs. uniprot
Match: A0A8I3A8M5_9AGAM (Urease accessory protein UreG n=2 Tax=Boletus reticuloceps TaxID=495285 RepID=A0A8I3A8M5_9AGAM)

HSP 1 Score: 311 bits (796), Expect = 9.520e-103
Identity = 157/243 (64.61%), Postives = 187/243 (76.95%), Query Frame = 2 
Query:  155 VTHGNEEPSASTQNTGFEEHXXXXEHMDHPGFFADRE-PPQPHRALSERAYTVGIGGPVGSGKTALMLELCKLLRDELSIGAVTNDIFTREDAEFLTKNSALEEGRILAIETGGCPHAAIREDISANLGACETLTARHNADIVLVESGGDNLAANYSRELADYIIYVIDVAGGDKVPRKGGPGITQSDLLVVNKTDLAEAVGADLEVMRREAKVMRGEGDTIFAQVKKGDGVQEIKTLILAGY 880
            ++H +E+      +    EH    EH+DH G FA+R+ P    R   ER +TVGIGGPVGSGKTAL L LCK LR+E +I  VTNDIFTRED EFL KN AL   RILAIETGGCPHAAIREDISANLGA E L A++   ++ VESGGDNLAANYSRELADYIIYVIDVAGGDK+PRKGGPGI+QSDLLV+NK D+AE V A LEVM+R+A++MRG+G T+FA VKK  GV+++  L+LA +
Sbjct:   17 LSHAHEQGGVVHSHDHGGEHGHTHEHLDHAGKFAERDLPDYTSRNFQERGFTVGIGGPVGSGKTALTLALCKRLREEYNIATVTNDIFTREDQEFLIKNEALPASRILAIETGGCPHAAIREDISANLGALENLQAKYGCQLLFVESGGDNLAANYSRELADYIIYVIDVAGGDKIPRKGGPGISQSDLLVINKIDIAEYVNASLEVMQRDARIMRGDGPTVFASVKKNQGVEDVVELVLAAW 259
[Close]
BLAST of mRNA_L-elsbetiae_contig6209.14796.1 vs. uniprot
Match: A0A165NK67_9APHY (Urease accessory protein UreG n=2 Tax=Fomitopsidaceae TaxID=1769247 RepID=A0A165NK67_9APHY)

HSP 1 Score: 311 bits (796), Expect = 1.050e-102
Identity = 161/251 (64.14%), Postives = 190/251 (75.70%), Query Frame = 2 
Query:  158 THGNEEPSASTQNTGFE-------EHXXXXEHMDHPGFFADRE-PPQPHRALSERAYTVGIGGPVGSGKTALMLELCKLLRDELSIGAVTNDIFTREDAEFLTKNSALEEGRILAIETGGCPHAAIREDISANLGACETLTARHNADIVLVESGGDNLAANYSRELADYIIYVIDVAGGDKVPRKGGPGITQSDLLVVNKTDLAEAVGADLEVMRREAKVMRGEGDTIFAQVKKGDGVQEIKTLILAGYEA 886
            T+G+ +P+ S  + G         +H    EH+DHPG FA+R+ P    R+  ER +TVGIGGPVGSGKTAL L LCK LR E +I  VTNDIFTRED EFL KN AL E RILAIETGGCPHAAIREDISAN+GA ETL A+    ++ VESGGDNLAANYSRELADYIIYVIDVAGGDK+PRKGGPGI+QSDLLV+NK D+A  V A LEVM R++K+MRG+G T+F  VK+  GVQ++  LILA + A
Sbjct:   13 TNGSSQPTYSHSHDGGAPHTHGPGDHGHTHEHLDHPGKFAERDLPDYSSRSFEERGFTVGIGGPVGSGKTALTLALCKALRQEYNIATVTNDIFTREDQEFLIKNKALPESRILAIETGGCPHAAIREDISANMGALETLQAKFGCQLLFVESGGDNLAANYSRELADYIIYVIDVAGGDKIPRKGGPGISQSDLLVINKIDIAPFVNASLEVMNRDSKLMRGDGPTLFTSVKEEKGVQDVIDLILAAWRA 263
[Close]
BLAST of mRNA_L-elsbetiae_contig6209.14796.1 vs. uniprot
Match: A0A7W1F4B9_9BACT (Urease accessory protein UreG n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7W1F4B9_9BACT)

HSP 1 Score: 309 bits (792), Expect = 1.480e-102
Identity = 160/226 (70.80%), Postives = 180/226 (79.65%), Query Frame = 2 
Query:  209 EHXXXXEHMDHPGFFADREPPQPHRALSERAYTVGIGGPVGSGKTALMLELCKLLRDELSIGAVTNDIFTREDAEFLTKNSALEEGRILAIETGGCPHAAIREDISANLGACETLTARHNADIVLVESGGDNLAANYSRELADYIIYVIDVAGGDKVPRKGGPGITQSDLLVVNKTDLAEAVGADLEVMRREAKVMRGEGDTIFAQVKKGDGVQEIKTLILAGYEA 886
            +H    EH+DHPG FA RE P   R  S+RA+TVGIGGPVGSGKTALML+LC+ LRD  ++ AVTNDIFT+ED EFL +N AL   RI A+ETGGCPHAAIREDI+ANL A E L AR   +I+L+ESGGDNLAANYSRELADYIIYVIDVAGGDKVPRKGGPGITQSDLLV+NKTDLA  VGADL VM R+AK MRG+G T+FAQVK G  V  I   ILA + A
Sbjct:   15 DHGHTHEHLDHPGHFAQRERPV-RRDFSQRAFTVGIGGPVGSGKTALMLQLCRALRDSHALAAVTNDIFTKEDGEFLVRNQALPAERIRAVETGGCPHAAIREDITANLVALEELHARFAPEILLIESGGDNLAANYSRELADYIIYVIDVAGGDKVPRKGGPGITQSDLLVINKTDLAPHVGADLAVMERDAKRMRGDGPTVFAQVKHGGAVDVIAAHILAAWRA 239
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6209.14796.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KV08_9PHAE6.780e-15289.20cobW domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A836CD81_9STRA4.130e-11176.61Urease accessory protein ureG n=1 Tax=Tribonema mi... [more]
A0A261Y2A4_9FUNG5.800e-10670.69Putative urease accessory protein ureG-like n=1 Ta... [more]
A0A1Y1XY18_9FUNG1.050e-10571.49Urease accessory protein UreG n=1 Tax=Basidiobolus... [more]
A0A162U528_PHYB81.430e-10567.47cobW domain-containing protein n=1 Tax=Phycomyces ... [more]
A0A397UXJ6_9GLOM2.480e-10473.30CobW/HypB/UreG, nucleotide-binding domain-containi... [more]
A0A1X2G8T7_9FUNG3.990e-10371.56Urease accessory protein UreG n=1 Tax=Hesseltinell... [more]
A0A8I3A8M5_9AGAM9.520e-10364.61Urease accessory protein UreG n=2 Tax=Boletus reti... [more]
A0A165NK67_9APHY1.050e-10264.14Urease accessory protein UreG n=2 Tax=Fomitopsidac... [more]
A0A7W1F4B9_9BACT1.480e-10270.80Urease accessory protein UreG n=1 Tax=Planctomycet... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6209contigL-elsbetiae_contig6209:2382..6970 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score445.3
Seed ortholog evalue2.1e-122
Seed eggNOG ortholog2880.D8LD20
Preferred nameUREG
KEGG koko:K03189
Hectar predicted targeting categoryother localisation
GOsGO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0019627,GO:0034641,GO:0043085,GO:0043603,GO:0044093,GO:0044237,GO:0044281,GO:0050790,GO:0065007,GO:0065009,GO:0071704,GO:0071941,GO:1901564
EggNOG free text desc.nickel cation binding
EggNOG OGs2QR6E@2759,COG0378@1
COG Functional cat.KO
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000
Ec32 ortholog descriptionCobW/HypB/UreG domain
Ec32 orthologEc-01_001950.1
Exons7
Model size947
Cds size828
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816681.3222458-UTR-L-elsbetiae_contig6209:2381..24661622816681.3222458-UTR-L-elsbetiae_contig6209:2381..2466Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6209 2382..2466 +
1691683735.8621051-UTR-L-elsbetiae_contig6209:2381..24661691683735.8621051-UTR-L-elsbetiae_contig6209:2381..2466Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6209 2382..2466 +
1622816681.432522-UTR-L-elsbetiae_contig6209:6936..69701622816681.432522-UTR-L-elsbetiae_contig6209:6936..6970Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6209 6937..6970 +
1691683735.9728105-UTR-L-elsbetiae_contig6209:6936..69701691683735.9728105-UTR-L-elsbetiae_contig6209:6936..6970Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6209 6937..6970 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816681.3358042-CDS-L-elsbetiae_contig6209:2466..25741622816681.3358042-CDS-L-elsbetiae_contig6209:2466..2574Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6209 2467..2574 +
1691683735.8757987-CDS-L-elsbetiae_contig6209:2466..25741691683735.8757987-CDS-L-elsbetiae_contig6209:2466..2574Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6209 2467..2574 +
1622816681.3509448-CDS-L-elsbetiae_contig6209:2856..29991622816681.3509448-CDS-L-elsbetiae_contig6209:2856..2999Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6209 2857..2999 +
1691683735.8898263-CDS-L-elsbetiae_contig6209:2856..29991691683735.8898263-CDS-L-elsbetiae_contig6209:2856..2999Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6209 2857..2999 +
1622816681.3638914-CDS-L-elsbetiae_contig6209:3459..35201622816681.3638914-CDS-L-elsbetiae_contig6209:3459..3520Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6209 3460..3520 +
1691683735.9004567-CDS-L-elsbetiae_contig6209:3459..35201691683735.9004567-CDS-L-elsbetiae_contig6209:3459..3520Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6209 3460..3520 +
1622816681.3747747-CDS-L-elsbetiae_contig6209:4051..41221622816681.3747747-CDS-L-elsbetiae_contig6209:4051..4122Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6209 4052..4122 +
1691683735.9146688-CDS-L-elsbetiae_contig6209:4051..41221691683735.9146688-CDS-L-elsbetiae_contig6209:4051..4122Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6209 4052..4122 +
1622816681.3905835-CDS-L-elsbetiae_contig6209:4750..48811622816681.3905835-CDS-L-elsbetiae_contig6209:4750..4881Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6209 4751..4881 +
1691683735.9300394-CDS-L-elsbetiae_contig6209:4750..48811691683735.9300394-CDS-L-elsbetiae_contig6209:4750..4881Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6209 4751..4881 +
1622816681.4084837-CDS-L-elsbetiae_contig6209:5458..56281622816681.4084837-CDS-L-elsbetiae_contig6209:5458..5628Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6209 5459..5628 +
1691683735.9404647-CDS-L-elsbetiae_contig6209:5458..56281691683735.9404647-CDS-L-elsbetiae_contig6209:5458..5628Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6209 5459..5628 +
1622816681.4199781-CDS-L-elsbetiae_contig6209:6792..69361622816681.4199781-CDS-L-elsbetiae_contig6209:6792..6936Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6209 6793..6936 +
1691683735.959036-CDS-L-elsbetiae_contig6209:6792..69361691683735.959036-CDS-L-elsbetiae_contig6209:6792..6936Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6209 6793..6936 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6209.14796.1prot_L-elsbetiae_contig6209.14796.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig6209 2467..6936 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig6209.14796.1

>prot_L-elsbetiae_contig6209.14796.1 ID=prot_L-elsbetiae_contig6209.14796.1|Name=mRNA_L-elsbetiae_contig6209.14796.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=276bp
MESEGHSHEHGHGHGHSHSHSQDVTHGNEEPSASTQNTGFEEHGHTHEHM
DHPGFFADREPPQPHRALSERAYTVGIGGPVGSGKTALMLELCKLLRDEL
SIGAVTNDIFTREDAEFLTKNSALEEGRILAIETGGCPHAAIREDISANL
GACETLTARHNADIVLVESGGDNLAANYSRELADYIIYVIDVAGGDKVPR
KGGPGITQSDLLVVNKTDLAEAVGADLEVMRREAKVMRGEGDTIFAQVKK
GDGVQEIKTLILAGYEAIKAAAAST*
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mRNA from alignment at L-elsbetiae_contig6209:2382..6970+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig6209.14796.1 ID=mRNA_L-elsbetiae_contig6209.14796.1|Name=mRNA_L-elsbetiae_contig6209.14796.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4589bp|location=Sequence derived from alignment at L-elsbetiae_contig6209:2382..6970+ (Laminarionema elsbetiae ELsaHSoW15)
GGTCGAGACTGATGTGCTGCAGAGACGAAGCGAGCAAACTCAGAAACACG
CGCCCTTCGCCCCACCTCCCGCCCTTTCCAAAGCCATGGAATCAGAAGGC
CACTCCCACGAGCATGGTCACGGCCACGGTCACAGTCACTCCCACTCCCA
AGATGTCACTCACGGAAATGAAGAACCCTCGGCGAGCACGCAGGTTCGCT
TCTGAAAAAGAGTTCTGTTTTCTGCACACTGTTGCTGCTTGTGAAAGCAC
ACTTGTGCACCATCTGCACCAGCTGCACTTCACGCGCTCACGCATTGCAC
TTCACACACACCTCTGAAAGTATTTCTTCCGCTCCGTTCCGCGCGCCATG
CCCGCTCGTCGACTATTCCCGCGAATATCATGCAATTGCTTGAAGTGTTC
GAAATATCTCACTACGCGTATGCATGCACCTACACATGCATGCCTGTACC
GGTACCATATCGGCGCCCACTCCAGAACACGGGCTTCGAAGAACATGGCC
ACACCCACGAGCACATGGACCACCCGGGTTTTTTCGCCGATCGCGAACCC
CCGCAGCCTCACCGAGCTCTTTCGGAGCGCGCTTACACCGTGGGAATCGG
CGGACCAGTAGGAAGCGGGTGGGTGGGTGTCAAAAAGTTTCGTTGTTGGT
TCCTTTCATTGACTGATGTCCCGTGGAAACCAGATGTGAGCGGACGGGTT
TCTGTTCTTGCCCTCAGCCCCCTTTCCCTCGCCTCGCCGGCGTGTGATAA
TATCCCGGAGTAAATAAAAAAAAACATCGTACCCTACATAATTATCTAAT
TATCTACAACATAGTCTATGTCCATGTATCTAGACTATGCACTTACCATA
AGTCTCCGCAAGACGGCACGCCCGTACGCGCCCCCAGACTTTCGAACGAC
GACTCCAGCTCGGAAAACGCCTCCATATATATACCTCCCGTCGCTTCCTC
ATTCAGCGGCCTTGATTTGTCTTATACATAGCTGTTGTTGGATAGATACA
TGGCTGCTCTCGACGTTGGCAATGCTTTTTTCTCACACGAGCTTCTTGCT
TCGCTCGTTTGTGTCACACTTCGGGCAGAAAGACGGCGTTGATGCTCGAG
CTATGCAAGTTGCTGCGGGACGAGCTAAGCATCGGAGCGGTGAGCCCCAT
AGCGTCGCGCCCCGTTTGTCTCTCCGCACTTGCGTAGCTTGTTTGTGAAC
TGGCGAAACCACCCCGCCTGGTGGCGAAGGAAGCAGTCGCACTTTTTGAG
GTTCTGTAGGCGGCGCTTGCTCGCCGTCAACGCCACACCTGTGGGCCTGT
CTACTCCGGCTGTCTGTGCTGCGCACAGCCCTCGCACTATAAAGGCTCTA
TATGCAAGGCGCGCGTTCTTCTGGTGTGTCTCTCAGCAGACAATCTCTCG
CTCTTTCTGGCTGTTTTGATTGCATTGCCGCCAGCAGCGTTGCCTGATGT
AGGCTGAGGTGTGGAGCAGTATGCGAAGAGGGCCCTGGGGCTAAATTTAA
ATTTAACAAGGCTGTGGGTCTCTTCGGAAATGGATGGCGGTTTTCGTGCC
GATGTACATATGTACATATATACATAGGACGCCAACCATTGACTGACTTT
GTTTACCTCACGTCCCCCTCCCTATATTTCTTTGTTTGCTGGTGGCCAAT
GCACAACCAATCGGATTCAGGTGACGAACGACATCTTTACTCGGGAAGAT
GCAGAGTTTCTCACCAAAAACTCCGCTTTGGAGGAGGGTAGGTGAGTCTT
GAGCCCGGCTCTATGCATGTAGAGCACAGCTGCATTGAGTTTGCCACAAA
CAGAGTGGTAGCTGCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCG
CGGGGCGTTGTGCCTCGCGGTGTCGTGGTGGGATTTGTCCCCGCGGGTTT
GTGGGTTTTTATTTTNNNNNNNNNNGGGGGGGGGGGGTTTTGGGCCCGCG
CCCTTTGGATATAGGACACACCGCTTTGCGTTCGCCCACAAAAAAGGGGG
GGGCGCCCCCCCCCCCCCCCCCCCCTTCATGGAACCGAGCGTGGATTTGC
TGCCTCGGTATGAACGGCGATTAGTCACTCCGGGGTTTGACATAATATAT
ATCTTCGCTCCGTTTTCTACGGCATGCGAAGTGGTGCGTGAGGGTCTCTC
CCCTCTCTTCTCTAATAAGTGAACCCTTATGTTCTCCGAAATCACCAGCG
ACTCGCCAATAGGTATCGGCGCGGAAGAGCTAAAGTGGCAGTCCACACAC
GATTCTGCCACTATTTTTTAGTTCTGCCACTGCTTTACCCCCCGTGCTCC
CGCGGACGACCATGTGCGTGTGCACGTGGTTTTGGTGTTGTTTCCCTCCT
TCTCCTCCTCAAACCACAGAATCCTTGCCATCGAGACTGGGGGCTGCCCC
CACGCCGCCATCCGGGAAGACATCAGCGCGAACCTCGGGGCATGCGAAAC
GCTTACCGCCAGGCATAACGCCGACATCGTCCTCGTCGAGTCCGGAGGCG
GTGCGTTACACAGCAGCAGGCACGGGGGCTCCCGTTGCGTGCTCAGCGAG
TGGTGCGGCGCGGGGCTTCAGGCCACCAAAACATGCGTGTCAGGGTCGCG
ACAACGTCCGATTTTCGGTGTTCCCTTCCATAGTTTTTGCTCCGACAGCC
CCCTTTTCGTGGAGTTCCTCCTTTTTGATACTTGCGCCGCACCACTGCAT
CTCCGGAGAATGCTGAACGCCAGTGGCGGATGAACGATCGATTGTTTTTT
TGTCGTACGAGCCTGTCCGGGGAAGAGCTACTTGCGCTACTCAAGTCGCA
AAGCCGGCTTCCTCGTCATGTCACTGCTTTTATGCACTTCGTTTCCCTTC
TTCTGCGTGCATTACCCCGATCACCCGGTACTTTTCTACAAGACTTGGCA
TGCTTCGACACCTCTCGCCCATAAAACCACCGCGTCTCTCTCTCTCTCTT
TCTCTCTCTCTCTGTCTGTCTCTGCCTCTCTCTCTCTCTCTCTCTCTCTC
TCTCTCTCTCTCTCTCCGCTCGCCCTGTTTTTGTTTTGCCTGCCCCTTTC
GGCCACCACCCCGTTTTATCGCGCCAGACAACCTCGCCGCGAACTACAGC
CGAGAACTGGCGGACTACATCATCTACGTGATCGACGTCGCCGGGGGGGA
CAAGGTGCCCAGAAAGGGTGGGCCCGGAATCACGCAGTCCGACCTCCTAG
TCGTCAACAAGACCGATTTAGCGGAGGCGGTCGGCGCGGACCTAGAGGTG
AAAAACAAACAACCAAGACGTGCGTTTTCGAACACGCATGCGTGCGGCCG
CTTACATGCGTGATGCGTGCATGCATGTTTTTTTTTGTTTTTTTTTGCAT
GCATGCATGCATGATTCGTGCATGCGTGCGGCCGCTTAAAATAGGGTTAA
AACTAGAGGGTTTACTGCCGCCCCTCTCTCTGTATCTCTCTTTGCTCCCT
CCCTTTCCCTCCCCCCCCCCCCCCCCGCCCCCTGTCTCCCCGTCTCTCTC
ACGACGCAAACCTTACTTAAACTCCAATACATATTTTTACCACATGCGGG
GTACACAAAGTCCGCATCACACGACGGGCCGTAAACTGCGTTGATATCTG
TGTTGCAAACCACAGAATGGCAGGAAAATTGAAGAGTACATATGCGTATA
TACATACCACGGGAATCTGGCTCTACATATCTCGCTGCCCTTACCCTTAC
GGCTCCAACACTACAAGCGCGCACACTGGAACGTGTAGCTCTCTCATGAC
ACCGACTGCGCTCTTGGCATATGTAGCGTTGTTCTGTTGTGTTGCTGCGG
CTGTCGTAAGCTTCCCGCTGTCTTCTCGTCTACATAGCACTCTTCACATT
TATTTTCGGTCAGGCCGAGTGATCCGTATGCAGCGAGGAGGGACCCCGAG
CTTGTTCTCGTCAATTCGTGTAGCGGCCTGTAGACTAAACACGAAACTCA
CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
TTTTTTTTTTCTGTTTCTTTTTTTTTTTTTTTTTTTTAAACAACAACACA
ACCGTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNCCCGCGGGT
TGTCCCCCCTTTTTTTCTCTTCTATTCTTGTGGCGGCTGGAAGCCGAACC
TCGAACCTCGTTTTTTTTTTTTTTTTTTTTTGTCTGCCCATTATTGGCTT
TTTGTCTATGTCCGGTTGTACCCGAGCCTTTTCTAACACTTTTGTATCAC
ACAACAGCACAACCGTTTTGTCTCTCTGTCTCTCTTGGCTTGTGGGTCGA
CCACTCTCAATATGACTTCTTGGGGGCTCTTTTTCCCTCGGGGATATGCT
GCACTCTTTGATGTTGCCCTTTGCTTGGACTGATTCAATCATCCCTGTGC
GACATTTTAAGGTCATGCGGCGCGAAGCAAAGGTCATGCGAGGGGAGGGA
GACACGATCTTCGCTCAGGTGAAGAAAGGCGACGGAGTGCAGGAAATCAA
GACGCTCATCCTCGCGGGCTACGAAGCCATCAAGGCGGCAGCGGCTAGCA
CTTAGTCGCCTTGGCAGCGGCGTCTTGTGTAAACGGGAG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig6209:2382..6970+

>mRNA_L-elsbetiae_contig6209.14796.1 ID=mRNA_L-elsbetiae_contig6209.14796.1|Name=mRNA_L-elsbetiae_contig6209.14796.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1656bp|location=Sequence derived from alignment at L-elsbetiae_contig6209:2382..6970+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGAATCAGAAGGCCACTCCCACGAGCATGGTCACGGCCACGGTCACAG
TCACTCCCACTCCCAAGATGTCACTCACGGAAATGAAGAACCCTCGGCGA
GCACGCAGATGGAATCAGAAGGCCACTCCCACGAGCATGGTCACGGCCAC
GGTCACAGTCACTCCCACTCCCAAGATGTCACTCACGGAAATGAAGAACC
CTCGGCGAGCACGCAGAACACGGGCTTCGAAGAACATGGCCACACCCACG
AGCACATGGACCACCCGGGTTTTTTCGCCGATCGCGAACCCCCGCAGCCT
CACCGAGCTCTTTCGGAGCGCGCTTACACCGTGGGAATCGGCGGACCAGT
AGGAAGCGGAACACGGGCTTCGAAGAACATGGCCACACCCACGAGCACAT
GGACCACCCGGGTTTTTTCGCCGATCGCGAACCCCCGCAGCCTCACCGAG
CTCTTTCGGAGCGCGCTTACACCGTGGGAATCGGCGGACCAGTAGGAAGC
GGAAAGACGGCGTTGATGCTCGAGCTATGCAAGTTGCTGCGGGACGAGCT
AAGCATCGGAGCGAAAGACGGCGTTGATGCTCGAGCTATGCAAGTTGCTG
CGGGACGAGCTAAGCATCGGAGCGGTGACGAACGACATCTTTACTCGGGA
AGATGCAGAGTTTCTCACCAAAAACTCCGCTTTGGAGGAGGGTAGGTGAC
GAACGACATCTTTACTCGGGAAGATGCAGAGTTTCTCACCAAAAACTCCG
CTTTGGAGGAGGGTAGAATCCTTGCCATCGAGACTGGGGGCTGCCCCCAC
GCCGCCATCCGGGAAGACATCAGCGCGAACCTCGGGGCATGCGAAACGCT
TACCGCCAGGCATAACGCCGACATCGTCCTCGTCGAGTCCGGAGGCGAAT
CCTTGCCATCGAGACTGGGGGCTGCCCCCACGCCGCCATCCGGGAAGACA
TCAGCGCGAACCTCGGGGCATGCGAAACGCTTACCGCCAGGCATAACGCC
GACATCGTCCTCGTCGAGTCCGGAGGCGACAACCTCGCCGCGAACTACAG
CCGAGAACTGGCGGACTACATCATCTACGTGATCGACGTCGCCGGGGGGG
ACAAGGTGCCCAGAAAGGGTGGGCCCGGAATCACGCAGTCCGACCTCCTA
GTCGTCAACAAGACCGATTTAGCGGAGGCGGTCGGCGCGGACCTAGAGAC
AACCTCGCCGCGAACTACAGCCGAGAACTGGCGGACTACATCATCTACGT
GATCGACGTCGCCGGGGGGGACAAGGTGCCCAGAAAGGGTGGGCCCGGAA
TCACGCAGTCCGACCTCCTAGTCGTCAACAAGACCGATTTAGCGGAGGCG
GTCGGCGCGGACCTAGAGGTCATGCGGCGCGAAGCAAAGGTCATGCGAGG
GGAGGGAGACACGATCTTCGCTCAGGTGAAGAAAGGCGACGGAGTGCAGG
AAATCAAGACGCTCATCCTCGCGGGCTACGAAGCCATCAAGGCGGCAGCG
GCTAGCACTTAGGTCATGCGGCGCGAAGCAAAGGTCATGCGAGGGGAGGG
AGACACGATCTTCGCTCAGGTGAAGAAAGGCGACGGAGTGCAGGAAATCA
AGACGCTCATCCTCGCGGGCTACGAAGCCATCAAGGCGGCAGCGGCTAGC
ACTTAG
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