mRNA_L-elsbetiae_contig620.14787.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig620.14787.1 vs. uniprot
Match: A0A6H5KXK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXK5_9PHAE) HSP 1 Score: 235 bits (599), Expect = 2.940e-70 Identity = 262/402 (65.17%), Postives = 288/402 (71.64%), Query Frame = 1 Query: 64 LDFIFELLTSQQWAELLRAPLQRAAAKGNRGLAQRLVRAGAEIGDALLHEAVRGGNGEIVGDLLESGASFTAKDTKGRTPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSRQCSELGITVIHPVARHGPVEILRAVIEHGADVDAPAVGINQSTALHCAXXXXXXXXXXXXXXXXXXXXXRACGGYTPLHXXXGMCSRXXXXXXXXXXXXXXXXXXXXXXXXMVAVYQAGAKGAAEVVDSLLRAGADEAVVNNDGNKAADMIGLMVEDEDRLPEDFERVRQLLANAPVDRAWRRRGHLVLCRALPDKMQQNQVT----------------------------------GGDWAVVVAKVVSLQEEGIFRTIVGYL 1167 +DFIFE+LTSQQ AELLRA L+ AAAKGN+ LAQRLVRAGAEIGDAL H AV GG+ EIV DLLES AS A D GRTPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX + + ++ H A G VEILRA+IEHGADVDA V Q TA XXXXXXXXXXXXXXXXXXXXX XXX XXXXXXXXXXXXXXXX M A QAG +GAAEVV+SLLRAGADE + N GNKA DMIG VE+EDRL ED ERVR+LLANAP DRAWRRRG+L++CRA PD++ + ++T GG+WAVVV+KV+SLQEEGIFRTIV YL Sbjct: 2 VDFIFEILTSQQLAELLRALLEHAAAKGNKDLAQRLVRAGAEIGDAL-HRAVDGGHREIVSDLLESEASLAATDMDGRTPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLRSTQFKCPATHAAALEGHVEILRAIIEHGADVDA--VDAQQRTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNSLLTPLMKAGRQAGRQGAAEVVNSLLRAGADETIANVQGNKAVDMIGEDVEEEDRLTEDVERVRELLANAPADRAWRRRGYLIMCRAQPDRVPERRMTSGTHYTNVARRTRSRAKMARARGIAGESTVDESTGGNWAVVVSKVISLQEEGIFRTIVEYL 400
BLAST of mRNA_L-elsbetiae_contig620.14787.1 vs. uniprot
Match: D7FKL4_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKL4_ECTSI) HSP 1 Score: 187 bits (476), Expect = 3.110e-52 Identity = 195/388 (50.26%), Postives = 239/388 (61.60%), Query Frame = 1 Query: 13 VSNKSGREALRGAEVHTLDFIFELLTSQQWAELLRAPLQRAAAKGNRGLAQRLVRAGAEIGDALLHEAVRGGNGEIVGDLLESGASFTAKDTKGRTPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSRQCSELGITVIHPVARHGPVEILRAVIEHGADVDAPAVGINQSTALHCAXXXXXXXXXXXXXXXXXXXXXRACGGYTPLHXXXGMCSRXXXXXXXXXXXXXXXXXXXXXXXXMVAVY---QAGAKGAAEVVDSLLRAGADEAVVNNDGNKAADMIGLMVEDEDRLPEDFERVRQLLANAPVDRAWRRRGHLVLCRALPDKMQQNQVTGGDWAVVVAKVVSLQEEGIFRTIVGYL 1167 ++N+ R ALRG E D E T +QWA L++ L+ AA +G+ L ++LV AGAEIG A+ H AVRGG+ +I LLESGAS +A D +G TPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ++R+ + I+ + A G V+ +R +IEHGADVDA G ALH A + G+T LH +R V Y +AG +G EVVD LLR GADE V +G +AAD IG+ V +EDR+PE+FE VR+LLANAP DRAWRRR LVLCRA PDKMQ ++ A + A+V+ L EEGIFRTIV ++ Sbjct: 1 MANECARGALRGEEERIFDLAAETCTPKQWAGLMQPFLEHAAGRGHEHLTRKLVEAGAEIGTAV-HAAVRGGHCDITEFLLESGASASASDEEGLTPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADINRRYGDREISALDIGAGEGHVDFIRTLIEHGADVDATNYG--GVAALHHATANNKVEAMDVLLRAGANARSMSESGHTVLHMAAITRTRTEAATLAVLLKHGADVNAQTVGGTSVLEYVATRAGKQGIVEVVDLLLRWGADETHVAGNGMRAADAIGMKVPEEDRIPEEFEGVRKLLANAPADRAWRRRCSLVLCRARPDKMQ---LSSDRIARLEARVLGLVEEGIFRTIVRFI 382
BLAST of mRNA_L-elsbetiae_contig620.14787.1 vs. uniprot
Match: D7G137_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G137_ECTSI) HSP 1 Score: 144 bits (362), Expect = 1.330e-35 Identity = 207/389 (53.21%), Postives = 246/389 (63.24%), Query Frame = 1 Query: 19 NKSGREALRGAEVHTLDFIFELLTSQQWAELLRAPLQRAAAKGNRGLAQRLVRAGAEIGDALLHEAVRGGNGEIVGDLLESGASFTAKDTKGRTPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSRQCSELGITVIHPVARHGPVEILRAVIEHGADVD-APAVGINQSTALHCAXXXXXXXXXXXXXXXXXXXXXRACGGYTPLHXXXGMCSRXXXXXXXXXXXXXXXXXXXXXXXXMVAVYQAGAK-GAAEVVDSLLRAGADEAVVNNDGNKAADMIGLMVEDEDRLPE----DFERVRQLLANAPVDRAWRRRGHLVLCRALPDKMQQNQVTGGDWAVVVAKVVSLQEEGIFRTIVGYL 1167 NK+ +E L+G E LD + + + +E L APL+ A A+G+ GLAQ+LV+AGA+IG LHEAVR G+ I LLE+GAS + TP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX++ + +E ++ + A VEILR +I+HG +V+ A A G TALH A R G PL XXX XXXXXXXXXXXXXXXXXXXXXXXX + G + G+ +VV LLR GADE +V G AAD IG R P D ER R LL AP DRAWRRRG LVLC A PD++Q GGD A +V +V+ L+E G+FRTIV YL Sbjct: 12 NKAAKETLKGEEERVLDLMLDTRCPHEMSEWLAAPLESAVARGDEGLAQKLVQAGAKIGGVALHEAVRRGHIAIAELLLENGASVHDDEDDYGTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTVRLNEFDMSFLDFAASSQDVEILRMLIDHGMEVNLAAAFG----TALHWAAKANRANAIDVLVGAGADIQARNMSGSRPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKVGQRRGSVQVVGLLLRWGADETIVCKQGKTAADRIGTR-----RFPSTEPGDDERARSLLTRAPADRAWRRRGLLVLCHAYPDRLQ----LGGDLAGLVDRVLGLEEVGVFRTIVLYL 387
BLAST of mRNA_L-elsbetiae_contig620.14787.1 vs. uniprot
Match: D7G1U1_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1U1_ECTSI) HSP 1 Score: 127 bits (319), Expect = 1.820e-29 Identity = 217/385 (56.36%), Postives = 259/385 (67.27%), Query Frame = 1 Query: 16 SNKSGREALRGAEVHTLDFIFELLTSQQWAELLRAPLQRAAAKGNRGLAQRLVRAGAEIGDALLHEAVRGGNGEIVGDLLESGASFTAKDTKGRTPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSRQCSELGITVIHPVARHGPVEILRAVIEHGADVDAPAVGINQSTALHCAXXXXXXXXXXXXXXXXXXXXXRACGGYTPLHXXXGMCSRXXXXXXXXXXXXXXXXXXXXXXXXMVAVYQAGAK-GAAEVVDSLLRAGADEAVVNNDGNKAADMIGLMVEDEDRLPEDFERVRQLLANAPVDRAWRRRGHLVLCRALPDKMQQNQVTGGDWAVVVAKVVSLQEEGIFRTIVGYL 1167 +NK+ +E ++G LD +F+ + +E L APL+ A G+ GLA++LV+AGA++G LHE VR G+ + LLE+GAS + TP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX++ + +E ++ + A VEI+R +I+HG +V + TAL XXXXXXXXXXXXXXXXXXXXX XXX XXXXXXXXXXXXXXXXXXXXXXXX G + G+A+VVD LLR GADE +V+ G AAD IG PED ER R LLA AP DRAWRRRG LVLCRA PD++Q GGD A +VA V L+E G+FRTIV YL Sbjct: 14 NNKAAKETMKGEGQRVLDLMFDTRWPHEMSEWLAAPLESAVVSGHEGLARKLVQAGAKVGGVALHETVRRGHIAMAELLLENGASVHDDEDDYGTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTVRLTEFEVSALDFAALSDHVEIVRMLIDHGMEVHR--ANSDGRTALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVGQRHGSAQVVDLLLRWGADETIVSKQGETAADSIGTR-RCHRTDPEDDERARSLLARAPADRAWRRRGLLVLCRAHPDRLQ----LGGDLAGLVAGVGGLEEVGVFRTIVLYL 391
BLAST of mRNA_L-elsbetiae_contig620.14787.1 vs. uniprot
Match: D8LL12_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL12_ECTSI) HSP 1 Score: 109 bits (272), Expect = 4.030e-23 Identity = 120/189 (63.49%), Postives = 146/189 (77.25%), Query Frame = 1 Query: 13 VSNKSGREALRGAEVHTLDFIFELLTSQQWAELLRAPLQRAAAKGNRGLAQRLVRAGAEIGDALLHEAVRGGNGEIVGDLLESGASFTAKDTKGRTPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSRQCSELGITVIHPVARHGPVEILRAVIEHGADVDA 579 ++N+ GR AL+GAE T D E+LT+ WAE+L+ PL+ AAA+GN L Q+L+RAGA++G AL H AVR G+ E+V +LLE GA + KDT+G TPL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX V+ +C L TV+ A G V+ILRA+++HGADV A Sbjct: 17 LANEQGRRALKGAEGETFDLFSEVLTTHGWAEMLQFPLECAAAQGNVALTQKLLRAGADMGSAL-HAAVRYGHAEVVTNLLEHGACVSIKDTRGSTPLQVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADVNVRCGLLKRTVLSLAAEKGHVDILRALVKHGADVTA 204
BLAST of mRNA_L-elsbetiae_contig620.14787.1 vs. uniprot
Match: D7FYD0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYD0_ECTSI) HSP 1 Score: 96.7 bits (239), Expect = 2.300e-18 Identity = 185/452 (40.93%), Postives = 232/452 (51.33%), Query Frame = 1 Query: 31 REALRGAEVHTLDFIFELLTSQQWAELLRAPLQRAAAKGNRGLAQRLVRAGAEIGDALLHEAVRGGNGEIVGDLLESGASFTAKDTKGRTPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSRQ-----------------------------------CSELGITVIHPVARHGPVEILRAVIEHGADVDAPAVGINQSTALHCAXXXXXXXXXXXXXXXXXXXXXRACGGYTPLHXXXGMCSRXXXXXXXXXXXXXXXXXXXXXXXXMVAVYQAGAKGAAEVVDSLLRAGADEAVVNNDGNKAADMIGLMVEDED-RLPEDFERVRQLLANAPVDRAWRRRGHLVLCRALPDKMQQNQVTGGD-------------------------------------WAVVVAKVVSLQEEGIFRTIVGYL 1167 R+ LRGA + LD + T ++WA L+ PL+ A G+R LA LVR GAE G A+ +EA+ G+ E++ LL++GAS +A D +G XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX + L + +H V+ ++ ++E GAD+ + ++ST LH A S XXXXXXXXXXXXXXXXXXXX A AG +G+AE+VD LLR GADE + +G + AD +G +E D L + V +LLANAP DRAWRRRG LVLCRA + + Q GGD W +VV L+EEGIFR++VG+L Sbjct: 6 RKPLRGAALRVLDLVSAASTPEEWAAWLKVPLEIAVRTGDRDLASMLVRGGAEAGTAV-NEAIACGDTEVMSLLLDNGASVSATDAEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLREWYDGAHRSXXXXXXXXXXXXXXXXXXXXXXXVNAGDNLFVPALHLAVAFNKVKAVKVLLEAGADIQGHS--FSRSTPLHLASFKQP--------------------------------SVESAVXXXXXXXXXXXXXXXXXXXXXXAASYAGRQGSAELVDLLLRRGADETTPDRNGQQPADRVGHCMELGDVLLGHEVVLVHELLANAPADRAWRRRGLLVLCRAWLRRSRLRQEDGGDTRGGLSRRTRSRAKLARSDAVGAGCRRGTPEGGTGDEWRSASKRVVELEEEGIFRSVVGFL 422
BLAST of mRNA_L-elsbetiae_contig620.14787.1 vs. uniprot
Match: A0A6H5JHY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY9_9PHAE) HSP 1 Score: 90.5 bits (223), Expect = 6.340e-16 Identity = 83/258 (32.17%), Postives = 108/258 (41.86%), Query Frame = 1 Query: 493 GITVIHPVARHGPVEILRAVIEHGADVDAPAVGINQSTALHCAXXXXXXXXXXXXXXXXXXXXXRACGGYTPLHXXXGMCSRXXXXXXXXXXXXXXXXXXXXXXXXMVAVYQAGAKGAAEVVDSLLRAGADEAVVNNDGNKAADMIGLMVEDEDRLPEDFERVRQLLANAPVDRAWRRRGHLVLCRA--------LPDKMQQNQVTGG---------------DWAVVVAKV-------VSLQEEG---IFRTIVGYL 1167 GIT + + + + E GA+++A A N ST LH A + TPLH +VA +AG+ G AE+VD LLR GADE V+ +G+ AADM+ L E+ D L ED +RVR+LLA AP DRAWRRRG L+L RA + Q G DWA VV+ + +SL +G IF IVGYL Sbjct: 557 GITALRVASAFDKAPAIDVLTEAGANIEAQA---NGSTPLHVASQEGRLAAGIALLRHGASVGKKNAAAQTPLH--------------------------------LVAA-KAGSPGTAEMVDLLLRRGADETAVSENGHTAADMVVLKTEESDSLAEDVDRVRKLLARAPADRAWRRRGFLILSRAHYPGGRVQFGHRTSQAPAAGVAKRTRSSEEPSRAEIDWAGVVSMLMGDGVDPISLMGDGANLIFEKIVGYL 778
BLAST of mRNA_L-elsbetiae_contig620.14787.1 vs. uniprot
Match: D7G981_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G981_ECTSI) HSP 1 Score: 82.0 bits (201), Expect = 1.790e-13 Identity = 58/153 (37.91%), Postives = 81/153 (52.94%), Query Frame = 1 Query: 823 YQAGAKGAAEVVDSLLRAGADEAVVNNDGNKAADMIGLMVEDEDRLPEDFERVRQLLANAPVDRAWRRRGHLVLCRALPDKM-------------------------QQNQVTGG-------------DWAVVVAKVVSLQEEGIFRTIVGYL 1167 + AG +GA EVVD LLR ADE + G+ +++G M + D + + +RV +LL AP DRAWRRRG LVLCRA P+++ ++ QV GG +W+ +V +V+ L +EGIFRTIVGYL Sbjct: 248 HSAGDEGAVEVVDLLLRWNADETDDDAYGHTPGNIVGCMTPETDSMFVNVQRVWKLLQYAPQDRAWRRRGMLVLCRAHPERLGLRQNASHVQESTVLRVTRSRTKLVEREQVAGGSGEGAAADGRTAREWSNMVYRVLGL-DEGIFRTIVGYL 399
BLAST of mRNA_L-elsbetiae_contig620.14787.1 vs. uniprot
Match: D7G6X8_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6X8_ECTSI) HSP 1 Score: 81.6 bits (200), Expect = 3.030e-13 Identity = 47/84 (55.95%), Postives = 57/84 (67.86%), Query Frame = 1 Query: 811 MVAVYQAGAKGAAEVVDSLLRAGADEAVVNNDGNKAADMIGLMVEDEDRLP---EDFERVRQLLANAPVDRAWRRRGHLVLCRA 1053 ++A QAG +G +VD LLR GADE +N DG AA+++G +E P +D ERVR LL NAPVDRAWRRRG LVLCRA Sbjct: 210 IIAARQAGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHIEYA-ACPLNKQDVERVRDLLENAPVDRAWRRRGFLVLCRA 292
BLAST of mRNA_L-elsbetiae_contig620.14787.1 vs. uniprot
Match: A0A6H5KNU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNU3_9PHAE) HSP 1 Score: 80.9 bits (198), Expect = 6.040e-13 Identity = 63/188 (33.51%), Postives = 82/188 (43.62%), Query Frame = 1 Query: 499 TVIHPVARHGPVEILRAVIEHGADVDAPAVGINQSTALHCAXXXXXXXXXXXXXXXXXXXXXRACGGYTPLHXXXGMCSRXXXXXXXXXXXXXXXXXXXXXXXXMVAVYQAGAKGAAEVVDSLLRAGADEAVVNNDGNKAADMIGLMVEDEDRLP---EDFERVRQLLANAPVDRAWRRRGHLVLCRA 1053 +V+ A+ G +LRA+++HG DV+ G T+LH A TP ++A QAG +G +VD LLR GADE +N DG AA+++G +E P +D ERVR LL NAP DRAWRRRG LVLCRA Sbjct: 158 SVLDFAAQKGDACVLRAILQHGVDVNRRTDGY---TSLHVAALNNRVAAIDVLVEAGAHVEVEDDDDCTPFLDACSNHCHEAALALFKHGANIEARDMRGETPLIIAARQAGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHIEYA-ACPLNKQDLERVRDLLENAPADRAWRRRGLLVLCRA 341 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig620.14787.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig620.14787.1 >prot_L-elsbetiae_contig620.14787.1 ID=prot_L-elsbetiae_contig620.14787.1|Name=mRNA_L-elsbetiae_contig620.14787.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=390bp MSDPVSNKSGREALRGAEVHTLDFIFELLTSQQWAELLRAPLQRAAAKGNback to top mRNA from alignment at L-elsbetiae_contig620:25720..26994- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig620.14787.1 ID=mRNA_L-elsbetiae_contig620.14787.1|Name=mRNA_L-elsbetiae_contig620.14787.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1275bp|location=Sequence derived from alignment at L-elsbetiae_contig620:25720..26994- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig620:25720..26994- >mRNA_L-elsbetiae_contig620.14787.1 ID=mRNA_L-elsbetiae_contig620.14787.1|Name=mRNA_L-elsbetiae_contig620.14787.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2340bp|location=Sequence derived from alignment at L-elsbetiae_contig620:25720..26994- (Laminarionema elsbetiae ELsaHSoW15)back to top |