mRNA_L-elsbetiae_contig620.14786.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig620.14786.1
Unique NamemRNA_L-elsbetiae_contig620.14786.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig620.14786.1 vs. uniprot
Match: A0A6H5KXK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXK5_9PHAE)

HSP 1 Score: 252 bits (643), Expect = 8.720e-77
Identity = 283/400 (70.75%), Postives = 311/400 (77.75%), Query Frame = 1
Query:   64 LDFIFELLTSQQWAELLRAPLQRAAAEGNRGLAQRLVRAGAEIGDVLLHEAVRGGNGEIVSDLLESGVSLSAKDTKGRTPLHVGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNHRYSELRITVMHGIAGHGHVEILRAVIEHGADVDAVDRDQSTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLMSAVNQAGQQGAAEVVDSLLRAGADETMVNNDGNKAADVIGEIVEDEDRLPEDVERVCQLLANAPADRAWRRRGYLVLYRAHPDRMQQNQL---------------------ARAVL--------SSGDWAVVVAKVLLLQEEGIFRTIVGYL 1176
            +DFIFE+LTSQQ AELLRA L+ AAA+GN+ LAQRLVRAGAEIGD L H AV GG+ EIVSDLLES  SL+A D  GRTPL    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   R ++ +    H  A  GHVEILRA+IEHGADVDAVD  Q TAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       LM A  QAG+QGAAEVV+SLLRAGADET+ N  GNKA D+IGE VE+EDRL EDVERV +LLANAPADRAWRRRGYL++ RA PDR+ + ++                     AR +         + G+WAVVV+KV+ LQEEGIFRTIV YL
Sbjct:    2 VDFIFEILTSQQLAELLRALLEHAAAKGNKDLAQRLVRAGAEIGDAL-HRAVDGGHREIVSDLLESEASLAATDMDGRTPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLRSTQFKCPATHAAALEGHVEILRAIIEHGADVDAVDAQQRTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNSLLTPLMKAGRQAGRQGAAEVVNSLLRAGADETIANVQGNKAVDMIGEDVEEEDRLTEDVERVRELLANAPADRAWRRRGYLIMCRAQPDRVPERRMTSGTHYTNVARRTRSRAKMARARGIAGESTVDESTGGNWAVVVSKVISLQEEGIFRTIVEYL 400          
BLAST of mRNA_L-elsbetiae_contig620.14786.1 vs. uniprot
Match: D7FKL4_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKL4_ECTSI)

HSP 1 Score: 176 bits (447), Expect = 6.100e-48
Identity = 187/391 (47.83%), Postives = 222/391 (56.78%), Query Frame = 1
Query:   13 VSNKSGREALRGAEVHTLDFIFELLTSQQWAELLRAPLQRAAAEGNRGLAQRLVRAGAEIGDVLLHEAVRGGNGEIVSDLLESGVSLSAKDTKGRTPLHVGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNHRYSELRITVMHGIAGHGHVEILRAVIEHGADVDAVDRDQSTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---LMSAVNQAGQQGAAEVVDSLLRAGADETMVNNDGNKAADVIGEIVEDEDRLPEDVERVCQLLANAPADRAWRRRGYLVLYRAHPDRMQQNQLARAVLSSGDWAVVVAKVLLLQEEGIFRTIVGYL 1176
            ++N+  R ALRG E    D   E  T +QWA L++  L+ AA  G+  L ++LV AGAEIG  + H AVRGG+ +I   LLESG S SA D +G TPL    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  +N RY +  I+ +   AG GHV+ +R +IEHGADVDA +     A                                                                     L     +AG+QG  EVVD LLR GADET V  +G +AAD IG  V +EDR+PE+ E V +LLANAPADRAWRRR  LVL RA PD+MQ        LSS   A + A+VL L EEGIFRTIV ++
Sbjct:    1 MANECARGALRGEEERIFDLAAETCTPKQWAGLMQPFLEHAAGRGHEHLTRKLVEAGAEIGTAV-HAAVRGGHCDITEFLLESGASASASDEEGLTPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADINRRYGDREISALDIGAGEGHVDFIRTLIEHGADVDATNYGGVAALHHATANNKVEAMDVLLRAGANARSMSESGHTVLHMAAITRTRTEAATLAVLLKHGADVNAQTVGGTSVLEYVATRAGKQGIVEVVDLLLRWGADETHVAGNGMRAADAIGMKVPEEDRIPEEFEGVRKLLANAPADRAWRRRCSLVLCRARPDKMQ--------LSSDRIARLEARVLGLVEEGIFRTIVRFI 382          
BLAST of mRNA_L-elsbetiae_contig620.14786.1 vs. uniprot
Match: D7G1U1_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1U1_ECTSI)

HSP 1 Score: 137 bits (345), Expect = 4.070e-33
Identity = 234/388 (60.31%), Postives = 274/388 (70.62%), Query Frame = 1
Query:   16 SNKSGREALRGAEVHTLDFIFELLTSQQWAELLRAPLQRAAAEGNRGLAQRLVRAGAEIGDVLLHEAVRGGNGEIVSDLLESGVSLSAKDTKGRTPLHVGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNHRYSELRITVMHGIAGHGHVEILRAVIEHGADVDAVDRDQSTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLMSAVNQAGQQ-GAAEVVDSLLRAGADETMVNNDGNKAADVIGEIVEDEDRLPEDVERVCQLLANAPADRAWRRRGYLVLYRAHPDRMQQNQLARAVLSSGDWAVVVAKVLLLQEEGIFRTIVGYL 1176
            +NK+ +E ++G     LD +F+     + +E L APL+ A   G+ GLA++LV+AGA++G V LHE VR G+  +   LLE+G S+   +    TP     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+  R +E  ++ +   A   HVEI+R +I+HG +V   + D  TA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        GQ+ G+A+VVD LLR GADET+V+  G  AAD IG         PED ER   LLA APADRAWRRRG LVL RAHPDR+Q           GD A +VA V  L+E G+FRTIV YL
Sbjct:   14 NNKAAKETMKGEGQRVLDLMFDTRWPHEMSEWLAAPLESAVVSGHEGLARKLVQAGAKVGGVALHETVRRGHIAMAELLLENGASVHDDEDDYGTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTVRLTEFEVSALDFAALSDHVEIVRMLIDHGMEVHRANSDGRTALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVGQRHGSAQVVDLLLRWGADETIVSKQGETAADSIG-TRRCHRTDPEDDERARSLLARAPADRAWRRRGLLVLCRAHPDRLQLG---------GDLAGLVAGVGGLEEVGVFRTIVLYL 391          
BLAST of mRNA_L-elsbetiae_contig620.14786.1 vs. uniprot
Match: D8LL12_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL12_ECTSI)

HSP 1 Score: 124 bits (312), Expect = 1.110e-28
Identity = 126/197 (63.96%), Postives = 153/197 (77.66%), Query Frame = 1
Query:   13 VSNKSGREALRGAEVHTLDFIFELLTSQQWAELLRAPLQRAAAEGNRGLAQRLVRAGAEIGDVLLHEAVRGGNGEIVSDLLESGVSLSAKDTKGRTPLHVGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNHRYSELRITVMHGIAGHGHVEILRAVIEHGADVDAVDRDQSTA 603
            ++N+ GR AL+GAE  T D   E+LT+  WAE+L+ PL+ AAA+GN  L Q+L+RAGA++G  L H AVR G+ E+V++LLE G  +S KDT+G TPL V  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  VN R   L+ TV+   A  GHV+ILRA+++HGADV AVD D+ TA
Sbjct:   17 LANEQGRRALKGAEGETFDLFSEVLTTHGWAEMLQFPLECAAAQGNVALTQKLLRAGADMGSAL-HAAVRYGHAEVVTNLLEHGACVSIKDTRGSTPLQVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADVNVRCGLLKRTVLSLAAEKGHVDILRALVKHGADVTAVDNDRDTA 212          
BLAST of mRNA_L-elsbetiae_contig620.14786.1 vs. uniprot
Match: D7G137_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G137_ECTSI)

HSP 1 Score: 124 bits (310), Expect = 3.300e-28
Identity = 197/386 (51.04%), Postives = 234/386 (60.62%), Query Frame = 1
Query:   19 NKSGREALRGAEVHTLDFIFELLTSQQWAELLRAPLQRAAAEGNRGLAQRLVRAGAEIGDVLLHEAVRGGNGEIVSDLLESGVSLSAKDTKGRTPLHVGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNHRYSELRITVMHGIAGHGHVEILRAVIEHGADVDAVDRDQSTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLMSAVNQAGQQGAAEVVDSLLRAGADETMVNNDGNKAADVIGEIVEDEDRLPEDVERVCQLLANAPADRAWRRRGYLVLYRAHPDRMQQNQLARAVLSSGDWAVVVAKVLLLQEEGIFRTIVGYL 1176
            NK+ +E L+G E   LD + +     + +E L APL+ A A G+ GLAQ+LV+AGA+IG V LHEAVR G+  I   LLE+G S+   +    TP     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+  R +E  ++ +   A    VEILR +I+HG +V+      +                                   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX         ++G+ +VV  LLR GADET+V   G  AAD IG         P D ER   LL  APADRAWRRRG LVL  A+PDR+Q           GD A +V +VL L+E G+FRTIV YL
Sbjct:   12 NKAAKETLKGEEERVLDLMLDTRCPHEMSEWLAAPLESAVARGDEGLAQKLVQAGAKIGGVALHEAVRRGHIAIAELLLENGASVHDDEDDYGTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTVRLNEFDMSFLDFAASSQDVEILRMLIDHGMEVNLAAAFGTALHWAAKANRANAIDVLVGAGADIQARNMSGSRPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKVGQRRGSVQVVGLLLRWGADETIVCKQGKTAADRIG-TRRFPSTEPGDDERARSLLTRAPADRAWRRRGLLVLCHAYPDRLQLG---------GDLAGLVDRVLGLEEVGVFRTIVLYL 387          
BLAST of mRNA_L-elsbetiae_contig620.14786.1 vs. uniprot
Match: D7FYD0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYD0_ECTSI)

HSP 1 Score: 93.2 bits (230), Expect = 3.650e-17
Identity = 185/450 (41.11%), Postives = 232/450 (51.56%), Query Frame = 1
Query:   31 REALRGAEVHTLDFIFELLTSQQWAELLRAPLQRAAAEGNRGLAQRLVRAGAEIGDVLLHEAVRGGNGEIVSDLLESGVSLSAKDTKGRTPLHVGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVN--------HRY---------------------------SELRITVMHGIAGHGHVEILRAVIEHGADVDAVDRDQSTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLMSAVNQAGQQGAAEVVDSLLRAGADETMVNNDGNKAADVIGEIVEDED-RLPEDVERVCQLLANAPADRAWRRRGYLVLYRAHPDRMQQNQ--------------LARAVLSSGD------------------WAVVVAKVLLLQEEGIFRTIVGYL 1176
            R+ LRGA +  LD +    T ++WA  L+ PL+ A   G+R LA  LVR GAE G  + +EA+  G+ E++S LL++G S+SA D +G        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX          HR                              L +  +H       V+ ++ ++E GAD+      +ST                XXXXXXXXXXXXXXXXXXXXXX                                A + AG+QG+AE+VD LLR GADET  + +G + AD +G  +E  D  L  +V  V +LLANAPADRAWRRRG LVL RA   R +  Q               +RA L+  D                  W     +V+ L+EEGIFR++VG+L
Sbjct:    6 RKPLRGAALRVLDLVSAASTPEEWAAWLKVPLEIAVRTGDRDLASMLVRGGAEAGTAV-NEAIACGDTEVMSLLLDNGASVSATDAEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLREWYDGAHRSXXXXXXXXXXXXXXXXXXXXXXXVNAGDNLFVPALHLAVAFNKVKAVKVLLEAGADIQGHSFSRSTPLHLASFKQPSVESAVXXXXXXXXXXXXXXXXXXXXXX--------------------------------AASYAGRQGSAELVDLLLRRGADETTPDRNGQQPADRVGHCMELGDVLLGHEVVLVHELLANAPADRAWRRRGLLVLCRAWLRRSRLRQEDGGDTRGGLSRRTRSRAKLARSDAVGAGCRRGTPEGGTGDEWRSASKRVVELEEEGIFRSVVGFL 422          
BLAST of mRNA_L-elsbetiae_contig620.14786.1 vs. uniprot
Match: A0A6H5JHY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY9_9PHAE)

HSP 1 Score: 90.9 bits (224), Expect = 4.920e-16
Identity = 64/147 (43.54%), Postives = 83/147 (56.46%), Query Frame = 1
Query:  820 QAGQQGAAEVVDSLLRAGADETMVNNDGNKAADVIGEIVEDEDRLPEDVERVCQLLANAPADRAWRRRGYLVLYRAH--PDRMQQNQLARAVLSSG----------------DWAVVVAKVL-------LLQEEG---IFRTIVGYL 1176
            +AG  G AE+VD LLR GADET V+ +G+ AAD++    E+ D L EDV+RV +LLA APADRAWRRRG+L+L RAH    R+Q         ++G                DWA VV+ ++        L  +G   IF  IVGYL
Sbjct:  632 KAGSPGTAEMVDLLLRRGADETAVSENGHTAADMVVLKTEESDSLAEDVDRVRKLLARAPADRAWRRRGFLILSRAHYPGGRVQFGHRTSQAPAAGVAKRTRSSEEPSRAEIDWAGVVSMLMGDGVDPISLMGDGANLIFEKIVGYL 778          
BLAST of mRNA_L-elsbetiae_contig620.14786.1 vs. uniprot
Match: D7G981_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G981_ECTSI)

HSP 1 Score: 84.7 bits (208), Expect = 2.300e-14
Identity = 61/153 (39.87%), Postives = 81/153 (52.94%), Query Frame = 1
Query:  817 NQAGQQGAAEVVDSLLRAGADETMVNNDGNKAADVIGEIVEDEDRLPEDVERVCQLLANAPADRAWRRRGYLVLYRAHPDRMQQNQLARAVLSSG---------------------------------DWAVVVAKVLLLQEEGIFRTIVGYL 1176
            + AG +GA EVVD LLR  ADET  +  G+   +++G +  + D +  +V+RV +LL  AP DRAWRRRG LVL RAHP+R+   Q A  V  S                                  +W+ +V +VL L +EGIFRTIVGYL
Sbjct:  248 HSAGDEGAVEVVDLLLRWNADETDDDAYGHTPGNIVGCMTPETDSMFVNVQRVWKLLQYAPQDRAWRRRGMLVLCRAHPERLGLRQNASHVQESTVLRVTRSRTKLVEREQVAGGSGEGAAADGRTAREWSNMVYRVLGL-DEGIFRTIVGYL 399          
BLAST of mRNA_L-elsbetiae_contig620.14786.1 vs. uniprot
Match: D7G6X8_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6X8_ECTSI)

HSP 1 Score: 82.4 bits (202), Expect = 1.730e-13
Identity = 49/85 (57.65%), Postives = 58/85 (68.24%), Query Frame = 1
Query:  802 LMSAVNQAGQQGAAEVVDSLLRAGADETMVNNDGNKAADVIGEIVEDEDRLP---EDVERVCQLLANAPADRAWRRRGYLVLYRA 1047
            L+ A  QAG+QG   +VD LLR GADET +N DG  AA+V+G  +E     P   +DVERV  LL NAP DRAWRRRG+LVL RA
Sbjct:  209 LIIAARQAGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHIEYA-ACPLNKQDVERVRDLLENAPVDRAWRRRGFLVLCRA 292          
BLAST of mRNA_L-elsbetiae_contig620.14786.1 vs. uniprot
Match: A0A6H5KNU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNU3_9PHAE)

HSP 1 Score: 81.3 bits (199), Expect = 4.640e-13
Identity = 49/85 (57.65%), Postives = 58/85 (68.24%), Query Frame = 1
Query:  802 LMSAVNQAGQQGAAEVVDSLLRAGADETMVNNDGNKAADVIGEIVEDEDRLP---EDVERVCQLLANAPADRAWRRRGYLVLYRA 1047
            L+ A  QAG+QG   +VD LLR GADET +N DG  AA+V+G  +E     P   +D+ERV  LL NAPADRAWRRRG LVL RA
Sbjct:  258 LIIAARQAGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHIEYA-ACPLNKQDLERVRDLLENAPADRAWRRRGLLVLCRA 341          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig620.14786.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KXK5_9PHAE8.720e-7770.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FKL4_ECTSI6.100e-4847.83Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=28... [more]
D7G1U1_ECTSI4.070e-3360.31Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
D8LL12_ECTSI1.110e-2863.96Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G137_ECTSI3.300e-2851.04Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
D7FYD0_ECTSI3.650e-1741.11Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=28... [more]
A0A6H5JHY9_9PHAE4.920e-1643.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G981_ECTSI2.300e-1439.87Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus si... [more]
D7G6X8_ECTSI1.730e-1357.65Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
A0A6H5KNU3_9PHAE4.640e-1357.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig620contigL-elsbetiae_contig620:18635..19870 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score181.4
Seed ortholog evalue8.1e-43
Seed eggNOG ortholog2880.D7FKL4
KEGG koko:K21440
Hectar predicted targeting categoryother localisation
GOsGO:0001508,GO:0002027,GO:0002262,GO:0002376,GO:0002520,GO:0003008,GO:0003012,GO:0003013,GO:0003015,GO:0003205,GO:0003230,GO:0003279,GO:0003283,GO:0003674,GO:0005198,GO:0005200,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005783,GO:0005829,GO:0005856,GO:0005886,GO:0005911,GO:0005938,GO:0006725,GO:0006778,GO:0006779,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006873,GO:0006874,GO:0006875,GO:0006887,GO:0006888,GO:0006928,GO:0006936,GO:0006937,GO:0006941,GO:0006942,GO:0006996,GO:0007009,GO:0007010,GO:0007154,GO:0007163,GO:0007165,GO:0007267,GO:0007275,GO:0007507,GO:0008015,GO:0008016,GO:0008092,GO:0008093,GO:0008104,GO:0008150,GO:0008152,GO:0009058,GO:0009893,GO:0009987,GO:0010256,GO:0010468,GO:0010522,GO:0010604,GO:0010628,GO:0010638,GO:0010646,GO:0010880,GO:0010881,GO:0010882,GO:0010959,GO:0012505,GO:0014704,GO:0014731,GO:0015672,GO:0016020,GO:0016043,GO:0016192,GO:0016323,GO:0016528,GO:0016529,GO:0018130,GO:0019222,GO:0019438,GO:0019722,GO:0019725,GO:0019899,GO:0019900,GO:0019901,GO:0019932,GO:0022898,GO:0023051,GO:0023052,GO:0030001,GO:0030003,GO:0030011,GO:0030016,GO:0030017,GO:0030018,GO:0030029,GO:0030048,GO:0030054,GO:0030097,GO:0030099,GO:0030154,GO:0030218,GO:0030315,GO:0030424,GO:0030507,GO:0030673,GO:0030674,GO:0030863,GO:0031252,GO:0031253,GO:0031256,GO:0031430,GO:0031647,GO:0031672,GO:0031674,GO:0032409,GO:0032411,GO:0032412,GO:0032414,GO:0032501,GO:0032502,GO:0032589,GO:0032879,GO:0032940,GO:0032970,GO:0033013,GO:0033014,GO:0033036,GO:0033043,GO:0033267,GO:0033292,GO:0033365,GO:0034101,GO:0034394,GO:0034613,GO:0034641,GO:0034762,GO:0034764,GO:0034765,GO:0034767,GO:0035088,GO:0035090,GO:0035556,GO:0035637,GO:0036309,GO:0036371,GO:0042383,GO:0042391,GO:0042592,GO:0042692,GO:0042995,GO:0043005,GO:0043034,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043266,GO:0043268,GO:0043269,GO:0043270,GO:0043292,GO:0044057,GO:0044093,GO:0044237,GO:0044249,GO:0044271,GO:0044291,GO:0044304,GO:0044325,GO:0044422,GO:0044424,GO:0044425,GO:0044444,GO:0044448,GO:0044449,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0045197,GO:0045199,GO:0045202,GO:0045211,GO:0046483,GO:0046903,GO:0046907,GO:0048193,GO:0048468,GO:0048513,GO:0048518,GO:0048522,GO:0048534,GO:0048731,GO:0048821,GO:0048856,GO:0048869,GO:0048872,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050821,GO:0050896,GO:0051049,GO:0051050,GO:0051117,GO:0051128,GO:0051130,GO:0051179,GO:0051186,GO:0051188,GO:0051234,GO:0051239,GO:0051270,GO:0051279,GO:0051282,GO:0051641,GO:0051649,GO:0051716,GO:0051899,GO:0051924,GO:0051928,GO:0055001,GO:0055065,GO:0055072,GO:0055074,GO:0055076,GO:0055080,GO:0055082,GO:0055117,GO:0060047,GO:0060048,GO:0060090,GO:0060255,GO:0060306,GO:0060307,GO:0060341,GO:0061024,GO:0061061,GO:0061245,GO:0061337,GO:0061515,GO:0065007,GO:0065008,GO:0065009,GO:0070252,GO:0070296,GO:0070727,GO:0070838,GO:0070972,GO:0071704,GO:0071840,GO:0071944,GO:0072359,GO:0072503,GO:0072507,GO:0072511,GO:0072657,GO:0072659,GO:0086001,GO:0086002,GO:0086003,GO:0086004,GO:0086005,GO:0086010,GO:0086012,GO:0086014,GO:0086015,GO:0086018,GO:0086019,GO:0086026,GO:0086046,GO:0086065,GO:0086066,GO:0086070,GO:0086091,GO:0090257,GO:0097060,GO:0097458,GO:0098590,GO:0098771,GO:0098794,GO:0098900,GO:0098901,GO:0098907,GO:0098910,GO:0099080,GO:0099081,GO:0099512,GO:0099568,GO:0099623,GO:0120025,GO:0120038,GO:1901016,GO:1901018,GO:1901019,GO:1901021,GO:1901360,GO:1901362,GO:1901379,GO:1901381,GO:1901564,GO:1901566,GO:1901576,GO:1903115,GO:1903169,GO:1903522,GO:1903779,GO:1904062,GO:1904064,GO:1904427,GO:1990778,GO:2001257,GO:2001259
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG4177@2759
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04131
Exons2
Model size1179
Cds size1179
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816680.4028158-CDS-L-elsbetiae_contig620:18634..197081622816680.4028158-CDS-L-elsbetiae_contig620:18634..19708Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig620 18635..19708 +
1691683735.1140444-CDS-L-elsbetiae_contig620:18634..197081691683735.1140444-CDS-L-elsbetiae_contig620:18634..19708Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig620 18635..19708 +
1622816680.4168656-CDS-L-elsbetiae_contig620:19765..198701622816680.4168656-CDS-L-elsbetiae_contig620:19765..19870Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig620 19766..19870 +
1691683735.1287997-CDS-L-elsbetiae_contig620:19765..198701691683735.1287997-CDS-L-elsbetiae_contig620:19765..19870Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig620 19766..19870 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig620.14786.1prot_L-elsbetiae_contig620.14786.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig620 18635..19870 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig620.14786.1

>prot_L-elsbetiae_contig620.14786.1 ID=prot_L-elsbetiae_contig620.14786.1|Name=mRNA_L-elsbetiae_contig620.14786.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=393bp
MSDPVSNKSGREALRGAEVHTLDFIFELLTSQQWAELLRAPLQRAAAEGN
RGLAQRLVRAGAEIGDVLLHEAVRGGNGEIVSDLLESGVSLSAKDTKGRT
PLHVGATLGKTEIVELLLLKGADKDACDNQEHTPLYLAASSDELATVLAL
LAAGADVNHRYSELRITVMHGIAGHGHVEILRAVIEHGADVDAVDRDQST
ALHCAAVNNNVEAIDVLVEAGANIEARGFAGCTPLDDASIFLRRKALLSL
LKHGANVHAQDDYASTPLMSAVNQAGQQGAAEVVDSLLRAGADETMVNND
GNKAADVIGEIVEDEDRLPEDVERVCQLLANAPADRAWRRRGYLVLYRAH
PDRMQQNQLARAVLSSGDWAVVVAKVLLLQEEGIFRTIVGYL*
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mRNA from alignment at L-elsbetiae_contig620:18635..19870+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig620.14786.1 ID=mRNA_L-elsbetiae_contig620.14786.1|Name=mRNA_L-elsbetiae_contig620.14786.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1236bp|location=Sequence derived from alignment at L-elsbetiae_contig620:18635..19870+ (Laminarionema elsbetiae ELsaHSoW15)
ATGTCCGACCCAGTGTCGAACAAGAGCGGGCGGGAGGCGCTTCGAGGAGC AGAGGTGCACACGTTAGATTTCATCTTCGAGTTACTCACATCACAGCAGT GGGCGGAGTTGCTGAGAGCTCCACTACAGCGTGCCGCCGCCGAGGGTAAC AGAGGCCTCGCACAGAGGCTGGTGAGGGCAGGAGCAGAGATCGGGGATGT ACTGCTGCATGAGGCCGTTCGAGGCGGAAATGGAGAGATCGTGAGCGACC TGCTGGAGAGTGGGGTATCGTTATCCGCCAAGGACACCAAAGGCCGCACT CCTCTCCATGTAGGTGCCACATTGGGGAAAACGGAAATAGTAGAGCTGTT GCTGCTGAAGGGGGCTGACAAAGACGCGTGTGACAACCAAGAACATACAC CACTGTATTTGGCAGCCTCGTCTGATGAATTGGCTACCGTACTGGCTCTG TTGGCGGCCGGCGCGGACGTCAACCATCGATACAGTGAACTCAGGATTAC AGTGATGCACGGGATCGCTGGACATGGGCATGTTGAGATCTTGAGGGCTG TGATCGAGCACGGGGCGGACGTGGACGCTGTTGACAGAGATCAAAGCACT GCTCTTCATTGCGCCGCAGTGAATAACAACGTTGAGGCCATCGATGTACT CGTCGAAGCTGGGGCCAACATCGAAGCAAGGGGCTTTGCTGGCTGCACAC CTCTTGATGATGCTTCCATTTTCCTCCGTCGAAAAGCCTTGCTTAGCCTT TTGAAGCATGGTGCGAACGTCCACGCCCAGGACGATTACGCCAGCACACC GTTGATGTCAGCAGTAAACCAAGCAGGACAGCAAGGAGCTGCGGAGGTGG TGGACTCTCTGCTGAGGGCAGGTGCAGACGAGACCATGGTTAACAATGAT GGCAACAAAGCGGCGGATGTGATTGGGGAAATTGTCGAAGACGAGGACCG TCTGCCCGAGGATGTCGAGCGCGTGTGCCAGCTGTTGGCCAACGCTCCGG CCGACCGGGCATGGCGTCGCCGAGGCTACCTGGTCTTGTACCGTGCCCAC CCGGACAGGATGCAGCAGAATCAGGTGATCAGCGGCACCCGTGATACCGA CACAGCGCGGAGGACTCGCAGCCGCGCTAAGCTGGCAAGGGCCGTGCTAT CCAGTGGCGACTGGGCCGTTGTGGTGGCGAAGGTGCTTTTGTTGCAGGAG GAGGGCATATTCCGGACGATCGTGGGGTACCTTTGA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig620:18635..19870+

>mRNA_L-elsbetiae_contig620.14786.1 ID=mRNA_L-elsbetiae_contig620.14786.1|Name=mRNA_L-elsbetiae_contig620.14786.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2358bp|location=Sequence derived from alignment at L-elsbetiae_contig620:18635..19870+ (Laminarionema elsbetiae ELsaHSoW15)
ATGTCCGACCCAGTGTCGAACAAGAGCGGGCGGGAGGCGCTTCGAGGAGC
AGAGGTGCACACGTTAGATTTCATCTTCGAGTTACTCACATCACAGCAGT
GGGCGGAGTTGCTGAGAGCTCCACTACAGCGTGCCGCCGCCGAGGGTAAC
AGAGGCCTCGCACAGAGGCTGGTGAGGGCAGGAGCAGAGATCGGGGATGT
ACTGCTGCATGAGGCCGTTCGAGGCGGAAATGGAGAGATCGTGAGCGACC
TGCTGGAGAGTGGGGTATCGTTATCCGCCAAGGACACCAAAGGCCGCACT
CCTCTCCATGTAGGTGCCACATTGGGGAAAACGGAAATAGTAGAGCTGTT
GCTGCTGAAGGGGGCTGACAAAGACGCGTGTGACAACCAAGAACATACAC
CACTGTATTTGGCAGCCTCGTCTGATGAATTGGCTACCGTACTGGCTCTG
TTGGCGGCCGGCGCGGACGTCAACCATCGATACAGTGAACTCAGGATTAC
AGTGATGCACGGGATCGCTGGACATGGGCATGTTGAGATCTTGAGGGCTG
TGATCGAGCACGGGGCGGACGTGGACGCTGTTGACAGAGATCAAAGCACT
GCTCTTCATTGCGCCGCAGTGAATAACAACGTTGAGGCCATCGATGTACT
CGTCGAAGCTGGGGCCAACATCGAAGCAAGGGGCTTTGCTGGCTGCACAC
CTCTTGATGATGCTTCCATTTTCCTCCGTCGAAAAGCCTTGCTTAGCCTT
TTGAAGCATGGTGCGAACGTCCACGCCCAGGACGATTACGCCAGCACACC
GTTGATGTCAGCAGTAAACCAAGCAGGACAGCAAGGAGCTGCGGAGGTGG
TGGACTCTCTGCTGAGGGCAGGTGCAGACGAGACCATGGTTAACAATGAT
GGCAACAAAGCGGCGGATGTGATTGGGGAAATTGTCGAAGACGAGGACCG
TCTGCCCGAGGATGTCGAGCGCGTGTGCCAGCTGTTGGCCAACGCTCCGG
CCGACCGGGCATGGCGTCGCCGAGGCTACCTGGTCTTGTACCGTGCCCAC
CCGGACAGGATGCAGCAGAATCAGATGTCCGACCCAGTGTCGAACAAGAG
CGGGCGGGAGGCGCTTCGAGGAGCAGAGGTGCACACGTTAGATTTCATCT
TCGAGTTACTCACATCACAGCAGTGGGCGGAGTTGCTGAGAGCTCCACTA
CAGCGTGCCGCCGCCGAGGGTAACAGAGGCCTCGCACAGAGGCTGGTGAG
GGCAGGAGCAGAGATCGGGGATGTACTGCTGCATGAGGCCGTTCGAGGCG
GAAATGGAGAGATCGTGAGCGACCTGCTGGAGAGTGGGGTATCGTTATCC
GCCAAGGACACCAAAGGCCGCACTCCTCTCCATGTAGGTGCCACATTGGG
GAAAACGGAAATAGTAGAGCTGTTGCTGCTGAAGGGGGCTGACAAAGACG
CGTGTGACAACCAAGAACATACACCACTGTATTTGGCAGCCTCGTCTGAT
GAATTGGCTACCGTACTGGCTCTGTTGGCGGCCGGCGCGGACGTCAACCA
TCGATACAGTGAACTCAGGATTACAGTGATGCACGGGATCGCTGGACATG
GGCATGTTGAGATCTTGAGGGCTGTGATCGAGCACGGGGCGGACGTGGAC
GCTGTTGACAGAGATCAAAGCACTGCTCTTCATTGCGCCGCAGTGAATAA
CAACGTTGAGGCCATCGATGTACTCGTCGAAGCTGGGGCCAACATCGAAG
CAAGGGGCTTTGCTGGCTGCACACCTCTTGATGATGCTTCCATTTTCCTC
CGTCGAAAAGCCTTGCTTAGCCTTTTGAAGCATGGTGCGAACGTCCACGC
CCAGGACGATTACGCCAGCACACCGTTGATGTCAGCAGTAAACCAAGCAG
GACAGCAAGGAGCTGCGGAGGTGGTGGACTCTCTGCTGAGGGCAGGTGCA
GACGAGACCATGGTTAACAATGATGGCAACAAAGCGGCGGATGTGATTGG
GGAAATTGTCGAAGACGAGGACCGTCTGCCCGAGGATGTCGAGCGCGTGT
GCCAGCTGTTGGCCAACGCTCCGGCCGACCGGGCATGGCGTCGCCGAGGC
TACCTGGTCTTGTACCGTGCCCACCCGGACAGGATGCAGCAGAATCAGCT
GGCAAGGGCCGTGCTATCCAGTGGCGACTGGGCCGTTGTGGTGGCGAAGG
TGCTTTTGTTGCAGGAGGAGGGCATATTCCGGACGATCGTGGGGTACCTT
TGACTGGCAAGGGCCGTGCTATCCAGTGGCGACTGGGCCGTTGTGGTGGC
GAAGGTGCTTTTGTTGCAGGAGGAGGGCATATTCCGGACGATCGTGGGGT
ACCTTTGA
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