mRNA_L-elsbetiae_contig62.14783.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
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Overview
Homology
BLAST of mRNA_L-elsbetiae_contig62.14783.1 vs. uniprot
Match: D8LJB5_ECTSI (MORN domain repeat containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJB5_ECTSI) HSP 1 Score: 993 bits (2567), Expect = 0.000e+0 Identity = 615/853 (72.10%), Postives = 673/853 (78.90%), Query Frame = 1
Query: 13 GPAAIREAIEAKRSKIKTPGVSLKTLERDAKRKKAWWNEKINIACMDGDGEPMEGCAWKVPRHRLTEVALQTMCLTCPAHVKIEYLKDQTTGDIVWPPDAQMNCQTLPWSYAVVA-----VVDRSKDPFYYGDVQIMIFNVPLKTINESTQVTSEEIKAWLLCGLLEEDEDVKEAQEIVRIMEAKAKEVEHKLSRVGYTKFSVKTGFGKEEKQTLTDEEQAEKREEIHEALSAERDKMEEDVIAAREMLEITLKQRKDRPVHLEQANIQPKVGTCTYYVSFSGFYGPTLEDIVCAKTDWPGIKLAASHDDLPPWAGRGVIPDGSKSYIKRYTEHAVNMRGAQICRLQHGFGQHKVARVRKSKQASGTTDTDDVTAGVPPANGLVSPPKVGGTPASTRGGTLSVPGTPTSTTPAFQPRGTASSXXXXXTPGEVGGPEGEGRTQEGGEKEASPP--PFAGKEFYFYHGEFVEGLKSGFGMEFTPADVYYGEYKQDKRNGVGSLHCANGDRIEGSFVSETRFPEADSVANPYTAGVCHGLVEIKCASGGIYKGEMKHGKITGKGEFVTCLGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFLDHGRSGPGTLFRGNVKRVYDSRSGKKALRSNRIYEGNWRASELRSGSMVTMSKAGVSYCAGPNKDVWYNRVVDRIKRRETQTQHKTLESLDFYGRYETLLRTEVEKKKSRLYAKQARQANQDLIDDHTKKVSAEDLKEAFSARAINLEQIMRVTGKQLESGAGSGSIAKASERLDWIAASRGTTSNGTLLSKLLLSRLEEAQELQELV 2550
G AAIREAIEA+RSKIKTPG SLKTLERDA RKKAWWNEKI IACMD DGEP++GCAWKVPR RLTEV L+ MCLTCP HVKIEYLKDQTTGDIVWPP AQM+C LPW+YAVVA V+DRS+DP YYGDVQIMIFNVPL T NE T EA+EIVR +EA+AK VEH+LSRVGY KF+ KTGFGK+EKQ LTDEEQA KREE +EALSA LE LK+ KD PVHLEQ N+Q KVG CTYYVSF GFYGPTLEDIVCAKTDWPGIKLAA+HDDLPPWAGRG IPDGSKSYIKRYTEHA+NMR QICRLQHGFGQHK TP STRGG P +P + + A +P SS T GG G+ +EGG+ + PFAGKEFYFYHGEF EGLKSGFGMEFT ADVYYGEYK+ KRNGVG+L CANGDRIEG+FVSETRFPEA S NPYTAGV HG+VEI ASGG Y+GEMKHG+ITGKGEFV+CLGE XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RSGPGTLFRGNVKRVYD RSGKKA++SNRIYEGNWRASELR+GSMVTM+KAGV++CAGPNK VWYNR VDRIKRRETQT KT+ESLDFYGRY+TLLRTEV+KKKSRLY+KQ +QANQDLI+DH KK++AE+L+E F ARAINLEQIMRVTGKQLE+ GSG+IAKASE+LD IAAS+G ++NGT LS+LLLSRLEEAQELQE+V
Sbjct: 6 GTAAIREAIEARRSKIKTPGESLKTLERDASRKKAWWNEKIQIACMDKDGEPIQGCAWKVPRRRLTEVVLRNMCLTCPEHVKIEYLKDQTTGDIVWPPHAQMHCHPLPWNYAVVAMEEKEVIDRSRDPTYYGDVQIMIFNVPLNTNNEKT-----------------------EAREIVRTLEAEAKMVEHQLSRVGYMKFTKKTGFGKDEKQLLTDEEQAAKREERNEALSAXXXXXXXXXXXXXXXLEGILKKTKDTPVHLEQGNVQKKVGNCTYYVSFPGFYGPTLEDIVCAKTDWPGIKLAAAHDDLPPWAGRGEIPDGSKSYIKRYTEHAINMRAVQICRLQHGFGQHK-------------------------------------TPLSTRGGATPAPTSPANASLAVRPLRDTSSAPRPPTA--TGGNVTGGQAKEGGQGKGVEDELPFAGKEFYFYHGEFAEGLKSGFGMEFTNADVYYGEYKKGKRNGVGALQCANGDRIEGNFVSETRFPEAGSEPNPYTAGVSHGIVEINYASGGTYRGEMKHGRITGKGEFVSCLGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRSGPGTLFRGNVKRVYDPRSGKKAIKSNRIYEGNWRASELRTGSMVTMTKAGVTHCAGPNKGVWYNRAVDRIKRRETQTHRKTVESLDFYGRYQTLLRTEVQKKKSRLYSKQVKQANQDLINDHVKKITAEELREVFVARAINLEQIMRVTGKQLEAEPGSGAIAKASEKLDRIAASKGRSANGTTLSRLLLSRLEEAQELQEVV 796
BLAST of mRNA_L-elsbetiae_contig62.14783.1 vs. uniprot
Match: A0A836CDM4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDM4_9STRA) HSP 1 Score: 295 bits (755), Expect = 2.810e-84 Identity = 292/798 (36.59%), Postives = 414/798 (51.88%), Query Frame = 1
Query: 13 GPAAIREAIEAKRSKIKTPGVSLKTLERDAKRKKAWWNEKINIACMDGDGEPMEGCAWKVPRHRLTEVALQTMCLTCPAHVKIEYLKDQTTGDIVWPPDAQMNCQTLPWSYAVVA-----VVDRSKDPFYYGDVQIMIFNVPLKTINESTQVTSEEIKAWLLCGLLEEDEDVKEAQEIVRIMEAKAKEVEHKLSRVGYTKFSVKTGFGKEEKQTLTDEEQAEKREEIHEALSAERDKMEEDVIAAR--------EMLEITLKQRKDRPVHLEQANIQPKVGTCTYYVSFSGFYGPTLEDIVCAKTDWPGIKLAASHDDLPPWAGRGVIPDGSKSYIKRYTEHAVNMRGAQICRLQHGFGQHKVAR-VRKSKQASGTTDTDDVTAGVPPANGLVSPPKVGGTPASTRGGTLSVPGTPTSTTPAFQPRGTASSXXXXXTPGEVGGPEGEGRTQEGGEKEASPPPFAGKEFYFYHGEFVEGLKSGFGMEFTPADVYYGEYKQDKRNGVGSLHCANGDRIEGSFVSETRFPEADSVANPYTAGVCHGLVEIKCASGGIYKGEMKHGKITGKGEFVTCLGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFLDHGRSGPGTLFRGNVKRVYDSRSGKKALRSNRIYEGNWRASELRSGSMVTMSKAGVSYCAGPNKDVWYNRVVDRIKRRETQTQHKTLESLDFYGRYETLLRTEVEKKKSRLYAKQARQANQDLIDDHTKKVSAEDLKEAFSARAIN 2364
G A++ A+EAKRSKI+ P +LK LER+A+RKK +WN+ + I C+D +G + C+W++ R +LT ++ +C CP + I+YL+D T ++VW D Q C+ PW+Y V+ V D D Y GD +M+ PL+T NE +ED ++ A++++ M + + ++ KL RV +V+ G T+ +Q RE ++ + E++ + + A+R ++L + R+ P L ++ I TCTY ++ G GP LED + AK +WPGIKLA +H + P WAGRG +PDGSK+Y+ YT H NMRGA +CRL HGFGQH+ R +R+ A+G R G T XXXXX GE+ PF G F FY G+F EG ++G G+ + +G ++ G H ++G R+ G + + R P S NPY GV G I G +Y+GE+ G+++G+G + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX G L RGNVK VYD+ +G + +NR+YEG +R L G VT+ + +C + + R R RRE E +K R+ KQ R+A D++ D+ + ++ E ++ + SA++ +
Sbjct: 6 GQASLLAAVEAKRSKIEVPPPTLKKLEREAERKKEFWNQNVIIKCVDANGIAVPNCSWRLQRRKLTPDFIKLLCQRCPLAINIDYLRDAATAEVVWLEDMQAVCKPAPWAYTVIPKEERRVADDRADAHYVGDTHLMLLQAPLRTENEE----------------FDEDVEISGARDLIAQMTQQMEALDKKLGRVA----AVQHGH--------TEAQQEAAREAMYATIVMEKEILAASLKASRAYFCEEAADVLASITEARRATPFALRRSAIDAARATCTYLITVGGAAGPALEDALVAKRNWPGIKLAVAHAENPAWAGRGTVPDGSKAYLPCYTRHGANMRGAALCRLAHGFGQHRAVRPLRRVATAAG----------------------------GARAGNTK--------TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGEEFLEHVPFCGARFAFYSGQFHEGTRTGAGVLYGEGGALWGAFEGGHARGACGEHRSDGTRLAGDWSAAARLPVEPS--NPYAIGVLDGAARIVFPDGAVYEGEVSAGRVSGEGTYCGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVLRRGNVKTVYDAHTGGQRPMANRVYEGTFRGGGLEGGGAVTVHRTRRMHCVAAREGDRWGRGAVRTARREAAAXXXXXXXXXXXXXXXXXXXATAEAEKRRVARKQVRRAEADIVADYHEPLTLEHVR-SVSAKSTS 736
BLAST of mRNA_L-elsbetiae_contig62.14783.1 vs. uniprot
Match: A0A8J2X342_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X342_9STRA) HSP 1 Score: 154 bits (390), Expect = 5.280e-35 Identity = 106/348 (30.46%), Postives = 174/348 (50.00%), Query Frame = 1
Query: 82 KTLERDAKRKKAWWNEKINIACMDGDGEPMEGCAWKVPRHRLTEVALQTMCLTCPAHVKIEYLKDQTTGDIVWPPDAQMNCQTLPWSYAVVA-----VVDRSKDPFYYGDVQIMIFNVPLKTINESTQVTSEEIKAWLLCGLLEEDEDVKEAQEIVRIMEAKAKEVEHKLSRVGYTKFSVKTGFGKEEKQTLTDEEQAEKREEIHEALSAERDKMEEDVIAAREMLEITLKQRKDRPVHL-----EQANIQPKVGTCTYYVSFSGFYGPTLEDIVCAKTDWPGIKLAASH----------DDLPPWAGRGVIPDGSKSYIKRYTEHAVNMRGAQICRLQHGFGQHKVA 1065
K R K+ W NE I +G+ + +++PR + E +LQ I+YL++ ++G+I++P +A C+ P Y V+ V D + Y G + +++ NVP++ V +E+I+ WL+ G+ EED DV+ A V +++A+ +EV+ + V + + GK K D+E+A K +E E K+E+ + A+E++ +R P+ L ++A GT +YVSF LE+ + K DW G+KLA +H + LPPWAGRG++PDGSK Y+ Y + VNM + R++HGFG K A
Sbjct: 23 KAARRKEVAKRKWHNELIRFEAQFPNGDTEK---FRLPRQKCDERSLQQFIFRTKQPFLIDYLQEASSGEIIYPGEALAKCRVRPAEYKVIPKPVREVDDAADKEGYEGSLALVLENVPVQNDATGHDVRAEDIREWLMFGIQEEDPDVRAAVGRVEVVQAEIEEVKRAMRDVPF--LEMFDAHGKPLKDEEADDERAVKYQECSEQKEQFEKKLEQAKLHAQEVI----MERDKTPIVLTSTEEDKAWTGHNNGTKAWYVSFQTDEAWQLEEWISGKQDWDGVKLALAHAVDSEEGNYKETLPPWAGRGMVPDGSKPYLPDYQPYVVNMAAVYVRRVEHGFGVLKSA 361
BLAST of mRNA_L-elsbetiae_contig62.14783.1 vs. uniprot
Match: A0A1V9ZR81_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZR81_9STRA) HSP 1 Score: 75.1 bits (183), Expect = 3.960e-10 Identity = 74/311 (23.79%), Postives = 130/311 (41.80%), Query Frame = 1
Query: 193 PRHRLTEVALQTMCLTCPAHVKIEYLKDQTTGDIVWPPDAQMNCQTL----PWSYAVVAV-----VDRSKDPFYYGDVQIMIFNVPLKTINESTQVTSEEIKAWLLCGLLEEDEDVKEAQEIVRIMEAKAKEVEHKLSRVGYTKFSVKTGFGKEEKQTLTDEEQAEKREEIHEALSAERDKMEEDVIAAREMLE----------ITLKQRKDRPVH-LEQANIQPKVGTCTYYVSFSGFYGPTLEDIVCAKTDWPGIKLAASHDDLPPWAGRGVIPDGSKSYIKRYTEHAVNMRGAQICRLQHGFGQHKVA 1065
P R+T L+ + Y +D G ++WP + Q+ PW Y +V VD + DP Y G I + NVP + + +++ WLL GLL + + + +A+ + ++E K + +L VG S EQ + R+++ +A++A++ +E+ +I +E ++ I L KD H I+ ++Y F G L + K DW ++LAA+ + P D S+ +NMR +ICR++HG G + V+
Sbjct: 47 PYQRITRANLRLRVVNRLFKCNAAYARDPF-GMVLWPREWQLKMMPATMAEPWCYDIVQSDEPEPVDDAMDPRYEGHTVIKVSNVPKECMEN-------DLRHWLLQGLLMDYDQINDAKFKLSVLEKKKDLLLDRLETVGTMAVSGNKS------------EQVDTRQKVTKAITAQQSDLEKQIIKTKESIKRWTRLLLSEPIELSYLKDGTEHRFVDTAIENDKEKYSWYADFKSLRGQELALMAINKRDWADLRLAATRPE--PTVSLEEFDDPSRE---------INMRMVRICRVKHGLGDYFVS 326 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig62.14783.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 4
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig62.14783.1 >prot_L-elsbetiae_contig62.14783.1 ID=prot_L-elsbetiae_contig62.14783.1|Name=mRNA_L-elsbetiae_contig62.14783.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=875bp MSQGGPAAIREAIEAKRSKIKTPGVSLKTLERDAKRKKAWWNEKINIACMback to top mRNA from alignment at L-elsbetiae_contig62:37260..50862+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig62.14783.1 ID=mRNA_L-elsbetiae_contig62.14783.1|Name=mRNA_L-elsbetiae_contig62.14783.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=13603bp|location=Sequence derived from alignment at L-elsbetiae_contig62:37260..50862+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig62:37260..50862+ >mRNA_L-elsbetiae_contig62.14783.1 ID=mRNA_L-elsbetiae_contig62.14783.1|Name=mRNA_L-elsbetiae_contig62.14783.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=5250bp|location=Sequence derived from alignment at L-elsbetiae_contig62:37260..50862+ (Laminarionema elsbetiae ELsaHSoW15)back to top |