mRNA_L-elsbetiae_contig6171.14750.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6171.14750.1 vs. uniprot
Match: D8LN02_ECTSI (Dynein heavy chain dynein heavy chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN02_ECTSI) HSP 1 Score: 211 bits (538), Expect = 1.810e-61 Identity = 102/103 (99.03%), Postives = 103/103 (100.00%), Query Frame = 2 Query: 2 GIDFQSMGRIFIGLVKCGAWGCFDEFNRLKEDQLSAISQQIQIIQDAIKAKRPSLRLLGREIDVDLNAGIFVTLNPAGKKYGGRSKLPDNLKALFRPVAMGRP 310 GIDFQSMGRIFIGLVKCGAWGCFDEFNRLKEDQLSAISQQIQIIQDAIKAKRPSLR+LGREIDVDLNAGIFVTLNPAGKKYGGRSKLPDNLKALFRPVAMGRP Sbjct: 1140 GIDFQSMGRIFIGLVKCGAWGCFDEFNRLKEDQLSAISQQIQIIQDAIKAKRPSLRILGREIDVDLNAGIFVTLNPAGKKYGGRSKLPDNLKALFRPVAMGRP 1242
BLAST of mRNA_L-elsbetiae_contig6171.14750.1 vs. uniprot
Match: A0A6H5L381_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L381_9PHAE) HSP 1 Score: 202 bits (514), Expect = 3.050e-58 Identity = 100/105 (95.24%), Postives = 101/105 (96.19%), Query Frame = 2 Query: 2 GIDFQSMGRIFIGLVKCGAWGCFDEFNRLKEDQLSAISQQIQIIQDAIKAKRPSLR--LLGREIDVDLNAGIFVTLNPAGKKYGGRSKLPDNLKALFRPVAMGRP 310 GIDFQSMG+IFIGLVKCGAWGCFDEFNRLKEDQLSAISQQIQIIQDAIKAKRP LR LLGREIDVDLN GIFVTLNPAGKKYGGRSKLPDNLKALFRPVAMGRP Sbjct: 239 GIDFQSMGKIFIGLVKCGAWGCFDEFNRLKEDQLSAISQQIQIIQDAIKAKRPFLRQALLGREIDVDLNTGIFVTLNPAGKKYGGRSKLPDNLKALFRPVAMGRP 343
BLAST of mRNA_L-elsbetiae_contig6171.14750.1 vs. uniprot
Match: A0A7S1TTM0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TTM0_9STRA) HSP 1 Score: 188 bits (477), Expect = 1.290e-56 Identity = 88/103 (85.44%), Postives = 96/103 (93.20%), Query Frame = 2 Query: 2 GIDFQSMGRIFIGLVKCGAWGCFDEFNRLKEDQLSAISQQIQIIQDAIKAKRPSLRLLGREIDVDLNAGIFVTLNPAGKKYGGRSKLPDNLKALFRPVAMGRP 310 GIDFQSMGRIFIGLVKCGAWGCFDEFNRLKEDQLSA+S QIQIIQDAIK +R ++LLGR I+V+ NAGIFVTLNPAGK YGGRS+LPDNLKALFRPVAMG+P Sbjct: 137 GIDFQSMGRIFIGLVKCGAWGCFDEFNRLKEDQLSAVSTQIQIIQDAIKTRRRQIKLLGRTIEVNFNAGIFVTLNPAGKDYGGRSRLPDNLKALFRPVAMGKP 239
BLAST of mRNA_L-elsbetiae_contig6171.14750.1 vs. uniprot
Match: A0A836CKQ4_9STRA (Dynein heavy chain, N-terminal region 2-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKQ4_9STRA) HSP 1 Score: 196 bits (498), Expect = 4.400e-56 Identity = 91/103 (88.35%), Postives = 98/103 (95.15%), Query Frame = 2 Query: 2 GIDFQSMGRIFIGLVKCGAWGCFDEFNRLKEDQLSAISQQIQIIQDAIKAKRPSLRLLGREIDVDLNAGIFVTLNPAGKKYGGRSKLPDNLKALFRPVAMGRP 310 GIDFQSMGRI IGL KCGAWGCFDEFNRLKEDQLSA+SQQIQ+IQDAIKA++P+LRLLGR +DVD NAGIFVTLNPAGK YGGRS+LPDNLKALFRPVAMGRP Sbjct: 665 GIDFQSMGRILIGLTKCGAWGCFDEFNRLKEDQLSAVSQQIQVIQDAIKARQPTLRLLGRAVDVDFNAGIFVTLNPAGKDYGGRSRLPDNLKALFRPVAMGRP 767
BLAST of mRNA_L-elsbetiae_contig6171.14750.1 vs. uniprot
Match: A0A8J2SHJ0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SHJ0_9STRA) HSP 1 Score: 192 bits (489), Expect = 7.250e-55 Identity = 91/103 (88.35%), Postives = 97/103 (94.17%), Query Frame = 2 Query: 2 GIDFQSMGRIFIGLVKCGAWGCFDEFNRLKEDQLSAISQQIQIIQDAIKAKRPSLRLLGREIDVDLNAGIFVTLNPAGKKYGGRSKLPDNLKALFRPVAMGRP 310 GIDF SMGRIFIGLVKCGAWGCFDEFNRLKEDQLSAISQQIQ+IQDAIKA+ P L L+GREI+VD NAGIFVTLNPAGK YGGRS++PDNLKALFRPVAMGRP Sbjct: 2318 GIDFHSMGRIFIGLVKCGAWGCFDEFNRLKEDQLSAISQQIQVIQDAIKARAPVLSLVGREINVDFNAGIFVTLNPAGKDYGGRSQIPDNLKALFRPVAMGRP 2420
BLAST of mRNA_L-elsbetiae_contig6171.14750.1 vs. uniprot
Match: A0A2P4WW42_9STRA (Dynein heavy chain (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4WW42_9STRA) HSP 1 Score: 191 bits (486), Expect = 1.760e-54 Identity = 91/103 (88.35%), Postives = 95/103 (92.23%), Query Frame = 2 Query: 2 GIDFQSMGRIFIGLVKCGAWGCFDEFNRLKEDQLSAISQQIQIIQDAIKAKRPSLRLLGREIDVDLNAGIFVTLNPAGKKYGGRSKLPDNLKALFRPVAMGRP 310 GIDFQSMGRIFIGLVKCGAWGCFDEFNRLKEDQLSAISQQIQ+IQDAIK K ++ LL R +DVD NAGIFVTLNPAGK YGGRSKLPDNLKALFRPVAMGRP Sbjct: 613 GIDFQSMGRIFIGLVKCGAWGCFDEFNRLKEDQLSAISQQIQVIQDAIKEKTGTINLLNRSVDVDFNAGIFVTLNPAGKGYGGRSKLPDNLKALFRPVAMGRP 715
BLAST of mRNA_L-elsbetiae_contig6171.14750.1 vs. uniprot
Match: A0A8J5MA63_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5MA63_9STRA) HSP 1 Score: 191 bits (486), Expect = 1.830e-54 Identity = 91/103 (88.35%), Postives = 95/103 (92.23%), Query Frame = 2 Query: 2 GIDFQSMGRIFIGLVKCGAWGCFDEFNRLKEDQLSAISQQIQIIQDAIKAKRPSLRLLGREIDVDLNAGIFVTLNPAGKKYGGRSKLPDNLKALFRPVAMGRP 310 GIDFQSMGRIFIGLVKCGAWGCFDEFNRLKEDQLSAISQQIQ+IQDAIK K ++ LL R +DVD NAGIFVTLNPAGK YGGRSKLPDNLKALFRPVAMGRP Sbjct: 40 GIDFQSMGRIFIGLVKCGAWGCFDEFNRLKEDQLSAISQQIQVIQDAIKEKTGNINLLNRSVDVDFNAGIFVTLNPAGKGYGGRSKLPDNLKALFRPVAMGRP 142
BLAST of mRNA_L-elsbetiae_contig6171.14750.1 vs. uniprot
Match: H3HBY2_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HBY2_PHYRM) HSP 1 Score: 191 bits (486), Expect = 1.830e-54 Identity = 91/103 (88.35%), Postives = 95/103 (92.23%), Query Frame = 2 Query: 2 GIDFQSMGRIFIGLVKCGAWGCFDEFNRLKEDQLSAISQQIQIIQDAIKAKRPSLRLLGREIDVDLNAGIFVTLNPAGKKYGGRSKLPDNLKALFRPVAMGRP 310 GIDFQSMGRIFIGLVKCGAWGCFDEFNRLKEDQLSAISQQIQ+IQDAIK K ++ LL R +DVD NAGIFVTLNPAGK YGGRSKLPDNLKALFRPVAMGRP Sbjct: 1780 GIDFQSMGRIFIGLVKCGAWGCFDEFNRLKEDQLSAISQQIQVIQDAIKEKTGTINLLNRSVDVDFNAGIFVTLNPAGKGYGGRSKLPDNLKALFRPVAMGRP 1882
BLAST of mRNA_L-elsbetiae_contig6171.14750.1 vs. uniprot
Match: A0A662XLI3_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XLI3_9STRA) HSP 1 Score: 191 bits (486), Expect = 1.830e-54 Identity = 91/103 (88.35%), Postives = 96/103 (93.20%), Query Frame = 2 Query: 2 GIDFQSMGRIFIGLVKCGAWGCFDEFNRLKEDQLSAISQQIQIIQDAIKAKRPSLRLLGREIDVDLNAGIFVTLNPAGKKYGGRSKLPDNLKALFRPVAMGRP 310 GIDFQSMGRIF+GLVKCGAWGCFDEFNRLKEDQLSAISQQIQ+IQDAIK K S++LL R +DVD NAGIFVTLNPAGK YGGRSKLPDNLKALFRPVAMGRP Sbjct: 1256 GIDFQSMGRIFLGLVKCGAWGCFDEFNRLKEDQLSAISQQIQVIQDAIKDKTRSIQLLNRAVDVDFNAGIFVTLNPAGKGYGGRSKLPDNLKALFRPVAMGRP 1358
BLAST of mRNA_L-elsbetiae_contig6171.14750.1 vs. uniprot
Match: A0A225WXS6_9STRA (Dynein heavy chain n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WXS6_9STRA) HSP 1 Score: 191 bits (486), Expect = 1.830e-54 Identity = 91/103 (88.35%), Postives = 95/103 (92.23%), Query Frame = 2 Query: 2 GIDFQSMGRIFIGLVKCGAWGCFDEFNRLKEDQLSAISQQIQIIQDAIKAKRPSLRLLGREIDVDLNAGIFVTLNPAGKKYGGRSKLPDNLKALFRPVAMGRP 310 GIDFQSMGRIFIGLVKCGAWGCFDEFNRLKEDQLSAISQQIQ+IQDAIK K ++ LL R +DVD NAGIFVTLNPAGK YGGRSKLPDNLKALFRPVAMGRP Sbjct: 1776 GIDFQSMGRIFIGLVKCGAWGCFDEFNRLKEDQLSAISQQIQVIQDAIKEKTGTINLLSRSVDVDFNAGIFVTLNPAGKGYGGRSKLPDNLKALFRPVAMGRP 1878 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6171.14750.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6171.14750.1 >prot_L-elsbetiae_contig6171.14750.1 ID=prot_L-elsbetiae_contig6171.14750.1|Name=mRNA_L-elsbetiae_contig6171.14750.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=104bp RDRLSEHGQDLYRPCQVRCLGLLRRVQPPQGGPAVGHLAADPDHPGRDQGback to top mRNA from alignment at L-elsbetiae_contig6171:5565..7763+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6171.14750.1 ID=mRNA_L-elsbetiae_contig6171.14750.1|Name=mRNA_L-elsbetiae_contig6171.14750.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2199bp|location=Sequence derived from alignment at L-elsbetiae_contig6171:5565..7763+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6171:5565..7763+ >mRNA_L-elsbetiae_contig6171.14750.1 ID=mRNA_L-elsbetiae_contig6171.14750.1|Name=mRNA_L-elsbetiae_contig6171.14750.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=624bp|location=Sequence derived from alignment at L-elsbetiae_contig6171:5565..7763+ (Laminarionema elsbetiae ELsaHSoW15)back to top |