mRNA_L-elsbetiae_contig6165.14737.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6165.14737.1 vs. uniprot
Match: D7G2Q5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Q5_ECTSI) HSP 1 Score: 242 bits (617), Expect = 1.570e-71 Identity = 184/387 (47.55%), Postives = 207/387 (53.49%), Query Frame = 1 Query: 1 EFEIFDEATSKKIQAEHEKDMADAAKAIGARRMGLITGDSEKSTVAP----------AASGTGLMGKLASATSLFSRKKTPVPVPAAVPA----PAXXXXXXXXXXXXXXXPAAASNSTQSSRSA---LPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEPATATVQPATPPEAPGAEE-GPLALPAPAVVTPAAQPPAETEXXEPAATGRSHSEEKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAEAVLPELKVVPFEVREPSLGAAVVGHVAILEGSCYVWAGTDGSAAQGSLAAAVGTRFDGGMPTATPLLAGEGAGEAGAAGGVGVSMAQRLCRRTGRVVFVSCDLSEDSQILVAAVEAKVLALLKAGD 1107 + +IFD ATSKKI EH++DM DAAKAIG R M LI G +++T A + G L+ KLA ATSLFSRKK P P PAA P PA + + Q S +A LPP P TA TP E P A++ G + P V PA XX E A +EAVLPELKVV F+VREP+LGA+VVGHV +L GSCYVWA T+GS AQGSLAAAVGTRFDGGMPTATPLLAGEGAGEAG GGVGVSMAQRLC+RTGRVVFVSCDLSEDSQILVAAVEAKV+ALLKA D Sbjct: 3 DIDIFDAATSKKIHEEHQRDMEDAAKAIGPRGMALIRGLEKQTTTATTRITQSLTAGSLHGGRLLRKLAPATSLFSRKKPPAPTPAAEPLAGSEPAAQAPTAPTLEQLLLAEIHMATNAQPSSAATLELPPAVAESG-----------------------SPETAAPTETTPEEPPAADDVGDVGRKPPPV-------PASXXXXXXXXXXXXXXGEPEPARRLKAEGKGSVEPARSASREPAEPAPSPPAAAPTKDAGSEAVLPELKVVSFDVREPTLGASVVGHVVVLAGSCYVWAATEGSVAQGSLAAAVGTRFDGGMPTATPLLAGEGAGEAGG-GGVGVSMAQRLCKRTGRVVFVSCDLSEDSQILVAAVEAKVVALLKAED 358
BLAST of mRNA_L-elsbetiae_contig6165.14737.1 vs. uniprot
Match: A0A6H5K9L5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9L5_9PHAE) HSP 1 Score: 241 bits (615), Expect = 3.580e-71 Identity = 187/394 (47.46%), Postives = 208/394 (52.79%), Query Frame = 1 Query: 1 EFEIFDEATSKKIQAEHEKDMADAAKAIGARRMGLITGDSEK----------STVAPAASGTGLMGKLASATSLFSRKKTPVPVPAAVP------APAXXXXXXXXXXXXXXXPAAASNSTQSSRSALPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEPATATVQPATPPEAPGAEE----GPLALPAPAVVTPAAQPPA-----ETEXXEPAATGRSHSEEKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAEAVLPELKVVPFEVREPSLGAAVVGHVAILEGSCYVWAGTDGSAAQGSLAAAVGTRFDGGMPTATPLLAGEGAGEAGAAGGVGVSMAQRLCRRTGRVVFVSCDLSEDSQILVAAVEAKVLALLKAGD 1107 + +IFD ATSKKI EH++DM DAAKAIG R M LI G + S A + G L+ KL ATS FSRKKTP P PAA P A A A+N+ SS + L P P TA TP E P A + G P PA T AA P + E T R S E A +EAVLPELK+V F+VREP+LGA+VVGHV +L GSCYVWA T+GS AQGSLAAAVGTRFDGGMPTATPLLAGEGAGEAG GGVGVSMAQRLC+RTGRVVFVSCDLSEDSQILVAAVEAKV+ALLKA D Sbjct: 17 DIDIFDAATSKKIHEEHQRDMEDAAKAIGPRGMALIRGLERQTMTATTRITQSLTAGSLHGGRLLRKLTPATSFFSRKKTPAPTPAAEPVAGPKPAAAPAPTAPTLEQLLLAELHMATNAQSSSNATLEPPPTVAESG---------------------SPETAAPT-ETPSEEPSAADDVDVGRKPPPVPASETAAAGEPEPARRLDAEGKGSVETARFTSRESAEPAPSPPAAAPTED------------------------AGSEAVLPELKIVSFDVREPTLGASVVGHVVVLAGSCYVWATTEGSVAQGSLAAAVGTRFDGGMPTATPLLAGEGAGEAGE-GGVGVSMAQRLCKRTGRVVFVSCDLSEDSQILVAAVEAKVVALLKAED 363
BLAST of mRNA_L-elsbetiae_contig6165.14737.1 vs. uniprot
Match: A0A485KKL7_9STRA (Aste57867_8572 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KKL7_9STRA) HSP 1 Score: 68.6 bits (166), Expect = 3.170e-10 Identity = 44/97 (45.36%), Postives = 60/97 (61.86%), Query Frame = 1 Query: 811 ILEGSCYVWAGTDGSAAQ-GSLAAAVGTRFDGGMPTATPLLAGEGAGEAGAAGGVGVSMAQRLCRRTGRVVFVSCDLSEDSQILVAAVEAKVLALLK 1098 +L +C+VW G DGS A+ GS++ AV TR+D +P A+ L+ G G V MAQRL RTG+ VFVSC+L ED L A VE +++A L+ Sbjct: 41 LLPNACFVWIGLDGSPARMGSMSTAVKTRYDP-LPLASSLIGGSG-------DEVEQQMAQRLVLRTGKQVFVSCNLPEDDMELCAFVERQIVARLR 129
BLAST of mRNA_L-elsbetiae_contig6165.14737.1 vs. uniprot
Match: A0A6V1TBI4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1TBI4_HETAK) HSP 1 Score: 68.6 bits (166), Expect = 2.590e-9 Identity = 44/125 (35.20%), Postives = 68/125 (54.40%), Query Frame = 1 Query: 739 PELKVVPFEVREPSLGAAVVGHVAILEGSCYVWAG------TDGSAAQGSLAAAVGTRFDGGMPTATPLLAGEGAGEAGAAGGVGVSMAQRLCRRTGRVVFVSCDLSEDSQILVAAVEAKVLALL 1095 P ++ E+ E +G +V + L GS Y+W +AA G L A+ TRFD MP T L+ + +G+ + GVSMAQRL ++TG V FVSC++ ++L+ VE +++ LL Sbjct: 96 PSPQIKTLELVENIMGESVALRIVALSGSAYIWCAPARAGAAAAAAAMGPLVCAMNTRFDS-MPIVTTLIQSQSSGDDDS----GVSMAQRLSKKTGLVCFVSCNIDHSIELLLPNVEKRIVQLL 215
BLAST of mRNA_L-elsbetiae_contig6165.14737.1 vs. uniprot
Match: W4FSB2_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FSB2_9STRA) HSP 1 Score: 58.9 bits (141), Expect = 7.100e-7 Identity = 41/97 (42.27%), Postives = 54/97 (55.67%), Query Frame = 1 Query: 811 ILEGSCYVWAGTDGS-AAQGSLAAAVGTRFDGGMPTATPLLAGEGAGEAGAAGGVGVSMAQRLCRRTGRVVFVSCDLSEDSQILVAAVEAKVLALLK 1098 +L +C+VW G D + GS++ AV TR+D +P A+ LL G A MAQRL RTG+ VFVSC+L ED L A VE +L L+ Sbjct: 41 LLAHACFVWVGLDETPVCMGSMSTAVKTRYDP-LPLASSLLG-------GGADDTEQQMAQRLVLRTGKQVFVSCNLPEDDMELGAYVERAILQRLR 129
BLAST of mRNA_L-elsbetiae_contig6165.14737.1 vs. uniprot
Match: A0A6G0WHC5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WHC5_9STRA) HSP 1 Score: 57.4 bits (137), Expect = 2.040e-6 Identity = 38/96 (39.58%), Postives = 54/96 (56.25%), Query Frame = 1 Query: 811 ILEGSCYVWAGTDGSAAQ-GSLAAAVGTRFDGGMPTATPLLAGEGAGEAGAAGGVGVSMAQRLCRRTGRVVFVSCDLSEDSQILVAAVEAKVLALL 1095 +L +C+VW G D +A GS++ AV T++D +P A+ L+ G E MAQRL RTGR VFVSC+L +D L A +E ++ L Sbjct: 36 LLANACFVWIGLDSTAVSLGSMSTAVKTKYDP-LPLASSLIGGGNEMEQ--------QMAQRLVLRTGRQVFVSCNLPDDDMELGAFIERAIIKRL 122
BLAST of mRNA_L-elsbetiae_contig6165.14737.1 vs. uniprot
Match: A0A024TET4_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TET4_9STRA) HSP 1 Score: 54.7 bits (130), Expect = 2.040e-5 Identity = 39/97 (40.21%), Postives = 57/97 (58.76%), Query Frame = 1 Query: 811 ILEGSCYVWAGTDGSAAQ-GSLAAAVGTRFDGGMPTATPLLAGEGAGEAGAAGGVGVSMAQRLCRRTGRVVFVSCDLSEDSQILVAAVEAKVLALLK 1098 +L + +VW G DG+ + GS++ AV TR+D +P ++ LL G G E + MAQRL RTG+ VFVSC+L ++ L A VE +L L+ Sbjct: 41 LLPHAVFVWVGLDGTPVRMGSMSMAVKTRYDA-LPLSSSLL-GAGTDE------IEQQMAQRLVLRTGKQVFVSCNLPDEDMDLSAYVERTILQHLR 129 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6165.14737.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6165.14737.1 >prot_L-elsbetiae_contig6165.14737.1 ID=prot_L-elsbetiae_contig6165.14737.1|Name=mRNA_L-elsbetiae_contig6165.14737.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=350bp MADAAKAIGARRMGLITGDSEKSTVAPAASGTGLMGKLASATSLFSRKKTback to top mRNA from alignment at L-elsbetiae_contig6165:2632..4674+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6165.14737.1 ID=mRNA_L-elsbetiae_contig6165.14737.1|Name=mRNA_L-elsbetiae_contig6165.14737.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2043bp|location=Sequence derived from alignment at L-elsbetiae_contig6165:2632..4674+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6165:2632..4674+ >mRNA_L-elsbetiae_contig6165.14737.1 ID=mRNA_L-elsbetiae_contig6165.14737.1|Name=mRNA_L-elsbetiae_contig6165.14737.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2100bp|location=Sequence derived from alignment at L-elsbetiae_contig6165:2632..4674+ (Laminarionema elsbetiae ELsaHSoW15)back to top |