mRNA_L-elsbetiae_contig6137.14704.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6137.14704.1 vs. uniprot
Match: D7FTC8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTC8_ECTSI) HSP 1 Score: 245 bits (625), Expect = 4.360e-75 Identity = 133/180 (73.89%), Postives = 149/180 (82.78%), Query Frame = 2 Query: 584 KKAPSSQS--TKRPRSPAKYQGSPKSRTAPSRMSRRLKGEPVDPHDLVALPGTWIGSLATATSKPGRTPPSFRHDYGLELNAEEAEQRMEVLKGQIDARDDAKAGTASYQHCLHRVRTMSDGQLARRVRTIERARGAKAKEKMLVFSHVLRARGKTDLLEMAEAALDRLVRGVPMPEKES 1117 K APS+ + TK+ RSP+K P SRTAPSR S+RL+ + DP +LVALPGTW SLA AT+KPG P SFRHDYG EL+ EEAE+RMEVLKG IDARD+AKAGTASY HCLHRVRTMSD LARRVRTIERARGA+AKEKMLVFS VL A+GKTDL E+AEAALDRLVRG+PMPE ES Sbjct: 52 KTAPSTAAAATKK-RSPSKRPRDPASRTAPSRTSKRLRSQAADPEELVALPGTWTSSLAGATTKPGGAPSSFRHDYGPELDPEEAEERMEVLKGHIDARDEAKAGTASYNHCLHRVRTMSDVSLARRVRTIERARGAQAKEKMLVFSRVLTAKGKTDLAEVAEAALDRLVRGLPMPEMES 230
BLAST of mRNA_L-elsbetiae_contig6137.14704.1 vs. uniprot
Match: A0A7S2WS01_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WS01_9STRA) HSP 1 Score: 67.8 bits (164), Expect = 2.330e-9 Identity = 58/175 (33.14%), Postives = 82/175 (46.86%), Query Frame = 2 Query: 584 KKAPSSQSTKRPRSPAKYQGSPKSRTAPSRMSRRLKGEP----VDPHDLVALPGTWIGSLATATSKPGRTPPSFRHDYGLELNAEEAEQRM---EVLKGQIDARDDAKAGTASYQHCLHRVRTMSDGQLARRVRTIERARGAKAKEKMLVFSHVLRARGKTDLLEMAEAALDRLV 1087 +K+ +S S + +S + P P R S RL+G+ VD H L G +T + L+A E + + E L+ + + GTASYQH LHRVRTM + LARR++ IERA G A KM +F+ VL G +L A A+L RL+ Sbjct: 37 RKSSASSSGPKRKSKKRPAADPDHAPGPRRRSSRLQGQSPTSVVDGHAEEVLSGGEERGRSTMEAP---------------LHASEEDHALAEAEHLRWAGKQKKASVVGTASYQHTLHRVRTMDEAALARRIKAIERAAGQHAVVKMRLFARVLCLEGHDELASDATASLQRLI 196
BLAST of mRNA_L-elsbetiae_contig6137.14704.1 vs. uniprot
Match: A0A7R9UAY5_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UAY5_9STRA) HSP 1 Score: 67.8 bits (164), Expect = 2.950e-9 Identity = 53/162 (32.72%), Postives = 80/162 (49.38%), Query Frame = 2 Query: 650 KSRTAPSRMSRRLKGEPVDPHDLVALPGTWIGSLATATSKPGRTPPSFRHDYGLELNAEEAEQRMEVLKGQIDARDDAKAG---------TASYQHCLHRVRTMSDGQLARRVRTIERARGAKAKEKMLVFSHVLRARGKTDLLEMAEAALDRLVRGVPMPE 1108 +++T P R SRRL+G+ + +G A G+ + + +E + +R L+ A + A+AG TASY+HCL RVR+M++ +L RV+ IERA G KM +F VL+ G +L E+A AL+RL P PE Sbjct: 74 RAQTQPKRSSRRLQGKGAE----------LVGLEKEAPEGAGQFDSTVSKEEEVEEEVDPEARRTAKLRA---ANEVARAGGDVAAMENPTASYEHCLMRVRSMTEKRLKTRVKVIERAAGRHCVVKMAIFVMVLKDEGMEELAELANDALERLKGLQPPPE 222
BLAST of mRNA_L-elsbetiae_contig6137.14704.1 vs. uniprot
Match: A0A8J5XV63_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XV63_DIALT) HSP 1 Score: 66.6 bits (161), Expect = 7.180e-9 Identity = 55/169 (32.54%), Postives = 79/169 (46.75%), Query Frame = 2 Query: 620 RSPAKYQGSPKSRTAPSRMSRRLKGEPVDPHDLVALPGTWIGSLATATSKPGRT---PPSFRHDYG---LELNAEEAEQRMEVLKGQIDARDDAKAGTASYQHCLHRVRTMSDGQLARRVRTIERARGAKAKEKMLVFSHVLRARGKTDLLEMAEAALDRLVRGVPMPE 1108 R+ A Q + K R + ++ G+ + H + LA+A T PP R ++ E R + L+ R + G+ASY+H LHRV TMS+ QL+RR+ IERA G A KM +F+ VL G L E A AA RLV + +P+ Sbjct: 39 RNAADGQRTSKKRASKTQAHAANLGDSGERHREAVRRSQRLADLASAAPLDACTEIDPPGARRKRAAGDIDCTGEHKAARDDHLRWAGSQRRASVVGSASYEHTLHRVMTMSEAQLSRRMNAIERACGQHAVVKMRLFASVLALEGYAHLAEEANAAHQRLVEKLGLPQ 207
BLAST of mRNA_L-elsbetiae_contig6137.14704.1 vs. uniprot
Match: A0A7S0D6P6_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0D6P6_MICPS) HSP 1 Score: 67.0 bits (162), Expect = 7.810e-9 Identity = 38/75 (50.67%), Postives = 49/75 (65.33%), Query Frame = 2 Query: 890 GTASYQHCLHRVRTMSDGQLARRVRTIERARGAKAKEKMLVFSHVLRARGKTDLLEMAEAALDRLVRGVPMPEKE 1114 GTASYQH L RVRTMSD LA R++ IERA+G A KM +F+ VL G L + A AAL RL+ + P+++ Sbjct: 164 GTASYQHTLMRVRTMSDSGLANRIKAIERAKGKHAVVKMRLFARVLFLEGNESLADDATAALRRLIEELGDPDED 238
BLAST of mRNA_L-elsbetiae_contig6137.14704.1 vs. uniprot
Match: B7GD44_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GD44_PHATC) HSP 1 Score: 65.5 bits (158), Expect = 2.620e-8 Identity = 55/149 (36.91%), Postives = 75/149 (50.34%), Query Frame = 2 Query: 665 PSRMSRRLKG-EPVDPHDLVALPGTWIGSLATATSKPGRTPPSFRHDYGLELNAEEAEQRMEVLKGQIDARDDAKAG-TASYQHCLHRVRTMSDGQLARRVRTIERARGAKAKEKMLVFSHVLRARGKTDLLEMAEAALDRLVRGVPMP 1105 P R S RLKG EP + T I S + +T + R +E +E Q+ ++ Q+ AK TA+Y+HCL RVRTM++ LA RV+ IERA G KM +F L+ GK DL +A AL+RL +P P Sbjct: 103 PYRSSMRLKGLEPDGGTANITSELTLIKSQSVSTIEVKE-----RRRILIEECRKER-QKAALIFAQLGIAQAAKENPTATYEHCLMRVRTMTEKALANRVKAIERAAGKHCVVKMAIFKSCLQDEGKWDLAALARDALERLKAMLPPP 245
BLAST of mRNA_L-elsbetiae_contig6137.14704.1 vs. uniprot
Match: A0A7S1B9Z9_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B9Z9_9STRA) HSP 1 Score: 65.1 bits (157), Expect = 2.710e-8 Identity = 55/153 (35.95%), Postives = 74/153 (48.37%), Query Frame = 2 Query: 659 TAPSRMSRRLKGEPVDPHDLVALPGTWIGSLATATSKPGRTPPSFRHDYGLELNAEEAEQRMEVLKGQIDARDDAKA---GTASYQHCLHRVRTMSDGQLARRVRTIERARGAKAKEKMLVFSHVLRARGKTDLLEMAEAALDRLVRGVPMPE 1108 TAP+R SRRL+G D + T P R + E +AE + R+ +A DA A TASY+HCL RVRTM++ L R++ IERA G KM +F L G +L E A +AL+RL +P+PE Sbjct: 86 TAPTRKSRRLQGISASKSDS----NEEMQVCDHYTPLPHR-----QLQTREEQSAERRKARLRAAALVAEAGADAAAMENPTASYEHCLMRVRTMTEKGLGNRIKAIERAAGRHCVVKMAIFRSCLLDEGYDELAEDAGSALERLKGLLPVPE 229
BLAST of mRNA_L-elsbetiae_contig6137.14704.1 vs. uniprot
Match: C1FFT4_MICCC (Uncharacterized protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1FFT4_MICCC) HSP 1 Score: 65.1 bits (157), Expect = 4.910e-8 Identity = 43/99 (43.43%), Postives = 58/99 (58.59%), Query Frame = 2 Query: 794 RHDYGLELN-AEEAEQRMEVLKGQIDARDDAKAGTASYQHCLHRVRTMSDGQLARRVRTIERARGAKAKEKMLVFSHVLRARGKTDLLEMAEAALDRLV 1087 R +Y +E++ A EAE L+ + GTASYQH L RVRTMS+ L RV+ IERA+G A KM +F+ VL G +L +A +L+RLV Sbjct: 162 RGEYAVEVDGAHEAEAEAYRLRNAGIQERVSVVGTASYQHTLMRVRTMSEPALGNRVKAIERAKGKHAVVKMKLFARVLFLEGYEELSTLATESLERLV 260
BLAST of mRNA_L-elsbetiae_contig6137.14704.1 vs. uniprot
Match: A0A7S3V986_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V986_9STRA) HSP 1 Score: 63.2 bits (152), Expect = 1.670e-7 Identity = 53/149 (35.57%), Postives = 69/149 (46.31%), Query Frame = 2 Query: 668 SRMSRRLKGEPVDPHDLVALPGTWIGSLATATSKPGRTPPSFRHDYGLELNAEEAEQRMEVLKG--QIDARDDAKAG-TASYQHCLHRVRTMSDGQLARRVRTIERARGAKAKEKMLVFSHVLRARGKTDLLEMAEAALDRLVRGVPMP 1105 SR S+RL+G VD L LP F E E E R+ K + A AK TA+Y+HCLHRVR+M+D LA RV+ IERA G KM +F L+ +L E++ AL+RL P+P Sbjct: 120 SRKSKRLQGVGVDNEPLSKLPQDR----------------EFVMRERSERVKECREVRLRAAKAVAECGAEKAAKENPTATYEHCLHRVRSMTDKGLANRVKAIERAAGKHCVVKMAIFKSCLQDENMWELAELSSNALERLKALKPIP 252
BLAST of mRNA_L-elsbetiae_contig6137.14704.1 vs. uniprot
Match: A0A7S4SJE8_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4SJE8_9STRA) HSP 1 Score: 62.4 bits (150), Expect = 2.440e-7 Identity = 50/146 (34.25%), Postives = 70/146 (47.95%), Query Frame = 2 Query: 659 TAPSRMSRRLKGEPVDPHDLVALPGTWIGSLATATSKPGRTPPSFRHDYGLELNAEEAEQRMEVLKGQIDARDDAKAG----TASYQHCLHRVRTMSDGQLARRVRTIERARGAKAKEKMLVFSHVLRARGKTDLLEMAEAALDRL 1084 T P+R S RL+G + +PG + + + R + E E R+ K DA + KAG TA+Y+HCL RVRTM++ L RVR IERA G KM +F L+ G +L ++A AL+RL Sbjct: 96 TEPARKSLRLQG--------IRVPGEEKEDMLESKEERQERVQKQREEIVKECR----ETRLRAAKAVADAGAE-KAGKENPTATYEHCLMRVRTMTEKGLVNRVRAIERAAGKHCVVKMAIFKSCLQDEGMWELAQVAADALERL 228 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6137.14704.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6137.14704.1 >prot_L-elsbetiae_contig6137.14704.1 ID=prot_L-elsbetiae_contig6137.14704.1|Name=mRNA_L-elsbetiae_contig6137.14704.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=149bp MSRRLKGEPVDPHDLVALPGTWIGSLATATSKPGRTPPSFRHDYGLELNAback to top mRNA from alignment at L-elsbetiae_contig6137:1403..4408- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6137.14704.1 ID=mRNA_L-elsbetiae_contig6137.14704.1|Name=mRNA_L-elsbetiae_contig6137.14704.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3006bp|location=Sequence derived from alignment at L-elsbetiae_contig6137:1403..4408- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6137:1403..4408- >mRNA_L-elsbetiae_contig6137.14704.1 ID=mRNA_L-elsbetiae_contig6137.14704.1|Name=mRNA_L-elsbetiae_contig6137.14704.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=894bp|location=Sequence derived from alignment at L-elsbetiae_contig6137:1403..4408- (Laminarionema elsbetiae ELsaHSoW15)back to top |