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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 286 |
| Cds size | 273 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622816669.2978716-UTR-L-elsbetiae_contig6119:6826..6839 | 1622816669.2978716-UTR-L-elsbetiae_contig6119:6826..6839 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig6119 6827..6839 + |
| 1691683726.927244-UTR-L-elsbetiae_contig6119:6826..6839 | 1691683726.927244-UTR-L-elsbetiae_contig6119:6826..6839 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig6119 6827..6839 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622816669.3100975-CDS-L-elsbetiae_contig6119:6839..6887 | 1622816669.3100975-CDS-L-elsbetiae_contig6119:6839..6887 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6119 6840..6887 + |
| 1691683726.937997-CDS-L-elsbetiae_contig6119:6839..6887 | 1691683726.937997-CDS-L-elsbetiae_contig6119:6839..6887 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6119 6840..6887 + |
| 1622816669.3211203-CDS-L-elsbetiae_contig6119:8788..8949 | 1622816669.3211203-CDS-L-elsbetiae_contig6119:8788..8949 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6119 8789..8949 + |
| 1691683726.947619-CDS-L-elsbetiae_contig6119:8788..8949 | 1691683726.947619-CDS-L-elsbetiae_contig6119:8788..8949 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6119 8789..8949 + |
| 1622816669.332045-CDS-L-elsbetiae_contig6119:10042..10106 | 1622816669.332045-CDS-L-elsbetiae_contig6119:10042..10106 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6119 10043..10106 + |
| 1691683726.958121-CDS-L-elsbetiae_contig6119:10042..10106 | 1691683726.958121-CDS-L-elsbetiae_contig6119:10042..10106 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6119 10043..10106 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6119.14675.1 >prot_L-elsbetiae_contig6119.14675.1 ID=prot_L-elsbetiae_contig6119.14675.1|Name=mRNA_L-elsbetiae_contig6119.14675.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=91bp
MDPSYRRRTSAEANIRSSSLVSAAAAADAAAAARERRAGQQGSAMDAPPG
TTSGSSRRSFNKSMRKPSMRFGRAGASIPGGEEEGDDDEQG back to topmRNA from alignment at L-elsbetiae_contig6119:6827..10106+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig6119.14675.1 ID=mRNA_L-elsbetiae_contig6119.14675.1|Name=mRNA_L-elsbetiae_contig6119.14675.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3280bp|location=Sequence derived from alignment at L-elsbetiae_contig6119:6827..10106+ (Laminarionema elsbetiae ELsaHSoW15)
TGCTGGAGGTCCGATGGATCCTTCTTATCGCCGACGGACGAGCGCTGAGG
CGAACATAAGGGTGAGCCTCCGGCAGCGTTTTAATTAAAAAGCATCGATC
GATAGACTGCTGTTTCTTTCGCTCGCAAGAACACACGACTTCTTCACAAT
GTCTACTGCTACACCCCTGCCGCCCATCTCCTGTGTGTTGCCACCAGTCG
TGAGGTGAACTGCAGTACTTATTGACCCTGCTACTGGAGCGAGCTTGTGC
TGATTTGGTAGTTCATCTGGGCCTGCAAGAACAGCAGTAACTTACTCGTG
AGGCCCCCCGCTGATGTGTTCCTCTCTGAAAAACGAAAGAACTTGCATCT
ACAATAGAGACTCTCGTGTGGAACGCGTATCCCTGTACGTATGCGTGTCG
TGGTGGGCTTTCTGCTGGTTGCCTTGCCAGCGGCAGGTGGTAAGCGCCGA
CGACGGTTGATTTCTGTACACAACAGTAGGTGTTGCACACACGTACACAG
CCTTACCGTAGGTGACACAAGATACCACACCCCCTGGGCCGATTTTAGAG
CTCCATTGCTCCGTAACGAAGAGGGTGCAACCACCAAAACGACACATTTT
CGGACAGCCCTCGACTAGATGTGTCGAACGCCACCCCCTTTCGGCACTGG
CACTCTTCTTGCCCTCTTGGGGAGGAGCCGAGCTTTGAAAATCTGTCCGA
GGGGTGTGGTATCTTGAGTCACCTACGGTAGAGTTTCACTGCAACAGCTA
CTTGTAAGCAGTTTACCTCGTGCCCAACTTGTTATGCATGTTACCCCGGG
CTCTCCCCTTCCTTTGCGAAGATGGTTGCGCTTTGCCCGTCTTAGCTGAC
CGAGGGCTACTGTACTTTTCCAACACCAAACGGTGCTATTCCCACCTCTA
TCAACAGAAACGGTGGGCTGTGTGTTTCTGATTTTTTTTTTATGTTTGTC
TCTTAACTCCAGTCGTATACCTTTTGTGAGGGTACACACAGTGGCGTTGT
AATCGAGTGGTTTGTTTCTATCCTGTGCATTTGTATAGTGATATCTCCCT
GTTTCTGATTTATTAGATATTGCCGCAACACTTCGAACTAAAAACTGCAG
CGGAACCTCAGTAACCCTGAGCTCTGAACATTTGGACATGCGTACAATAG
AGGAGGATGGGGCCAGCGAGGCAGACAACGGATATGCCAATGAGACCACT
GACTGTTTATGGCAAATGCATGCGAAAGGCTGTGCGGTTTGTTTGTCGCC
GACGTACGTGCATTCGGGGAGCAATGGTTGTCTCGTAAAATTGACAACAG
CAGTATCTTCCCCATGGCGTACTGCTGCAGTGCACGACGACATCCGAAGT
GTTGTAAGTGCAGCACAGCAGGCGCAATAGCAGCAGTGCATACGGAGAGT
AGTACATGCTTGTATGTGTTCCTCCCTCCACGCTCCGCTCCTGAAACGGG
ATACATACTACATATGTGTAACGTACCTGTGCCGCGGTAATATTGTAGAG
CGGGCAGCACTCCTCCGTTGTGCATCAGCGGCAGTTTTCAGCAGCGGCAT
CCGGGGTGTGAACTTCATTTGTTGCATATCCCTCAGGGTATCTACAGAGT
ATAGCCGTCTGGAAAAAACACGCGGCCGAGATCCAGACCCCACCACGTCT
GGGTGTGATGCAAAACCAAAAAAACGACTGTCTCATGATACACGTGGATG
CTATGTGCATATGTATGTATGTACCTTAGAAGAGATCACACAAGAAATCG
GCTCAGCAGCTTCGGAAACCTCCGTAAGCCTGCCAGACTTGAGCCGTCCA
ACCATTGCATTGCGTGCAGTACAGCATAGGGCATCACATATCATACGCAT
CCTTTCCCTGAACGCCGTTCATTTTTTAATTGCGCTTCTCTCAAGCCGCT
CGGCCCGCGCCCCGACACCCGAGCCGTCCGCGCACTCTCACGCGACTTGT
TTTTGCCGGCAGTCTTCTTCTCTTGTATCAGCGGCAGCAGCAGCAGACGC
GGCGGCGGCGGCGAGAGAGAGACGGGCAGGACAGCAAGGCTCGGCGATGG
ACGCGCCACCGGGCACCACCAGCGGCAGCAGCAGAAGGTCCTTCAACAAG
AGCATGCGCAAGCCCTCCATGAGGTACGTATTTAACTAACACATGTTTTA
CCTCTTTTCCTCCTTTCCTTGTGAACGACTTCTTGTTCTTGTGACTTCCC
TGATGCACTTTGGAAACGGAACGAAGCTAGACAGGGTAAGCATATGTCCC
ATGAAAGGCAGCAGTTACGAGTTTCGATCGTCCCCGAGAGAACACAGACG
GGCAGAAGTCTCTCCCCTGCCCCCCCCCCCCCTCTCCTGCTGTCTAGATG
GTCGAAGCCACCTGCACCGAATTTGGTGAGGCAGTGAGTGGGGTACCGTG
GTCTGCTCCTTCCCCCCCCCCCCCCGGGGTGCATGAATTCCATTGCCGAT
TGTTCTACACAACGGAGAAGAGGATACGATGAGCGAAAAGCATTCCATCT
GGGGAAGGTCTTGGGTTCCATTTGGGGAAGTTCTCGGTGAGGGTTTTCCA
ATGAGGCATCTCTCGGCGATAGAACCCTCTCCACTGCACAGAGTCATCGG
CTGTAAAATTCGTTCCCTGCCCCCCCCCTCCCAGGGGTGACCATGCTCGG
AGGAGATTCCGGCTCTCAGCGAACCGCTCCGCTTTGGCGTCGTCGTGTCT
TGTCCAAAAATCGATCGGCGGCGTTTAGCGCATAATTCGCCGCAACAGCA
AAACACTCCGACGGCGCGGCGATGCGCACTGCTTGCTATCCGCGATGCGA
TAAGGAACGCAAATACTCTCCCGCACAATCAATCGAGCATCCGTCCGTGG
TGTTAAGAGTGCAAGGAGCATATTCTATTCAACTACATGTCCATATTTGT
ATTTACCCCAAACGACTAAAAATATACTTCGTATATATAAAAAAAAAGCA
GAAGGAAAGCAAAAAAACACAAAATATCTTGCGACAGGGAAAAAAAAGGG
GGGTTAGTATGCCTACAACAGATCCCTCTGGAACGATACTTTCACAGACC
GGACGTAGACTGCTGACATCTGTATACATTAATCAAAACAAATACACACA
CACACACACACAAACACACACACACACACACAGACACACATGGATCTAAA
CTATTGTTCCTCAAAATTAAATGAAAAAAAAAAAAAAAACTCTGGTATGT
GTGTTGTTGGTTGCAGGTTTGGGCGGGCCGGCGCGTCGATCCCAGGAGGA
GAGGAGGAAGGCGACGACGACGAGCAGGGG back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig6119:6827..10106+ >mRNA_L-elsbetiae_contig6119.14675.1 ID=mRNA_L-elsbetiae_contig6119.14675.1|Name=mRNA_L-elsbetiae_contig6119.14675.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=546bp|location=Sequence derived from alignment at L-elsbetiae_contig6119:6827..10106+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGATCCTTCTTATCGCCGACGGACGAGCGCTGAGGCGAACATAAGGAT
GGATCCTTCTTATCGCCGACGGACGAGCGCTGAGGCGAACATAAGGTCTT
CTTCTCTTGTATCAGCGGCAGCAGCAGCAGACGCGGCGGCGGCGGCGAGA
GAGAGACGGGCAGGACAGCAAGGCTCGGCGATGGACGCGCCACCGGGCAC
CACCAGCGGCAGCAGCAGAAGGTCCTTCAACAAGAGCATGCGCAAGCCCT
CCATGAGTCTTCTTCTCTTGTATCAGCGGCAGCAGCAGCAGACGCGGCGG
CGGCGGCGAGAGAGAGACGGGCAGGACAGCAAGGCTCGGCGATGGACGCG
CCACCGGGCACCACCAGCGGCAGCAGCAGAAGGTCCTTCAACAAGAGCAT
GCGCAAGCCCTCCATGAGGTTTGGGCGGGCCGGCGCGTCGATCCCAGGAG
GAGAGGAGGAAGGCGACGACGACGAGCAGGGGGTTTGGGCGGGCCGGCGC
GTCGATCCCAGGAGGAGAGGAGGAAGGCGACGACGACGAGCAGGGG back to top
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