mRNA_L-elsbetiae_contig611.14668.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig611.14668.1 vs. uniprot
Match: A0A6H5KZ71_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KZ71_9PHAE) HSP 1 Score: 306 bits (784), Expect = 1.820e-100 Identity = 178/253 (70.36%), Postives = 188/253 (74.31%), Query Frame = 3 Query: 237 SLGFTVPPAAPPAALAARVHPARGGPRLPYDVAARISPPRAGKGGYHHPARELGGGAWTHKDPVGLGSHGGRVRRSSSGRLAAETTAMMASPLPDTPSTPPKEES--PALVYGESATRSFVKALAWRLTAGVVTLISGLVFSGSLSTAMSIVGSDFVTKSGFMFAGERVWNKVKWGQDKGGDSTKRSLAKAVLWRVFAASNTLICGVFLAKDLSIASKIAGTDTIFKTGLFFLNERLWTKINWGKEYEPEYYL 989 SLGF VPPAA PA+ AAR P G AA P G Y A+ L GGA GG S R A T MMA+PLP+TP PP E PALVYGESA RSFVKAL WRLTAGVVTL+SGLVFSGSL+TAMSIVGSDFVTKSGFMFAGER+WNKVKWGQDK GDSTKRSLAKAVLWRVFAASNTLICGVFLAKDLS+ASKIAGTDT+FKT LFFLNER WTKI+WGKEYEPEYYL Sbjct: 16 SLGFVVPPAAAPAS-AARWQPVCRG----SSTAAAGQPRAQGTKAYAIGAKGLHGGA------------GG-----SRSRTVAPPT-MMATPLPETPDAPPTTEELRPALVYGESAARSFVKALVWRLTAGVVTLVSGLVFSGSLATAMSIVGSDFVTKSGFMFAGERLWNKVKWGQDKSGDSTKRSLAKAVLWRVFAASNTLICGVFLAKDLSVASKIAGTDTLFKTALFFLNERAWTKIDWGKEYEPEYYL 245
BLAST of mRNA_L-elsbetiae_contig611.14668.1 vs. uniprot
Match: A0A836CRK4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CRK4_9STRA) HSP 1 Score: 216 bits (550), Expect = 3.900e-65 Identity = 104/158 (65.82%), Postives = 123/158 (77.85%), Query Frame = 3 Query: 516 PDTPSTPPKEESPALVYGESATRSFVKALAWRLTAGVVTLISGLVFSGSLSTAMSIVGSDFVTKSGFMFAGERVWNKVKWGQDKGGDSTKRSLAKAVLWRVFAASNTLICGVFLAKDLSIASKIAGTDTIFKTGLFFLNERLWTKINWGKEYEPEYYL 989 P STPP + AL + E+ RS KA+ WR+TA V+TLISGLVFS +L TA SIVGSDFVTKSGFMF GERVWNKV WG+ D KRSLAKA+LWRVFAA NTLICG FLA DLS+A KIAG+DT+FKT LF++NER+W ++ WGKEYE E+ + Sbjct: 90 PQDTSTPPTDTGKALYFTETTMRSLAKAVVWRVTAAVITLISGLVFSKNLKTAASIVGSDFVTKSGFMFLGERVWNKVNWGKGAKTDGAKRSLAKALLWRVFAAGNTLICGAFLAGDLSVALKIAGSDTVFKTFLFYINERMWARVEWGKEYEIEFVI 247
BLAST of mRNA_L-elsbetiae_contig611.14668.1 vs. uniprot
Match: A0A835YMA1_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMA1_9STRA) HSP 1 Score: 198 bits (504), Expect = 1.860e-59 Identity = 94/153 (61.44%), Postives = 114/153 (74.51%), Query Frame = 3 Query: 531 TPPKEESPALVYGESATRSFVKALAWRLTAGVVTLISGLVFSGSLSTAMSIVGSDFVTKSGFMFAGERVWNKVKWGQDKGGDSTKRSLAKAVLWRVFAASNTLICGVFLAKDLSIASKIAGTDTIFKTGLFFLNERLWTKINWGKEYEPEYYL 989 TP AL + E+ RS KA+ WR+ A V+TL SGLVFS +L A SIVGSDFVTKSGFMF GER WNKV WG+ D KRSLAKA+LWRVFA NTLICG FLA DLS+A KIAG+DT+FKT LF++NER+W ++ WGKEY+ ++ + Sbjct: 7 TPSTANLKALYFTETTMRSLAKAIVWRVAAAVITLASGLVFSKNLRMAASIVGSDFVTKSGFMFLGERAWNKVNWGKGAKTDGAKRSLAKALLWRVFATGNTLICGAFLAGDLSVALKIAGSDTVFKTILFYINERMWARVEWGKEYDADFVI 159
BLAST of mRNA_L-elsbetiae_contig611.14668.1 vs. uniprot
Match: A0A7S2UXG1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXG1_9STRA) HSP 1 Score: 189 bits (480), Expect = 6.360e-55 Identity = 87/154 (56.49%), Postives = 116/154 (75.32%), Query Frame = 3 Query: 549 SPALVYGESATRSFVKALAWRLTAGVVTLISGLVFSGSLSTAMSIVGSDFVTKSGFMFAGERVWNKVKWGQDKGG-------DSTKRSLAKAVLWRVFAASNTLICGVFLAKDLSIASKIAGTDTIFKTGLFFLNERLWTKINWGKEYEPEYYL 989 +P + + E+ RS VKAL WRLTAG++T I+ +FSG LSTA IVG DFV+K+GFM+ GERVW+KV WG+ KG DS RSL KA++WR FAA+NTL+ F+AKD+SIA KIA +DT+FKT LF++NER+W+++ WGKEY+ EY + Sbjct: 74 APEVPFTETNKRSIVKALLWRLTAGIITFITSFIFSGDLSTAAKIVGGDFVSKAGFMYVGERVWSKVNWGRTKGNKDSKTAMDSKSRSLTKALVWRAFAATNTLVMSFFMAKDVSIAGKIASSDTVFKTFLFYINERIWSRVEWGKEYQLEYNI 227
BLAST of mRNA_L-elsbetiae_contig611.14668.1 vs. uniprot
Match: A0A7R9ZQP1_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZQP1_9STRA) HSP 1 Score: 173 bits (439), Expect = 2.020e-49 Identity = 85/149 (57.05%), Postives = 106/149 (71.14%), Query Frame = 3 Query: 543 EESPALVYGESATRSFVKALAWRLTAGVVTLISGLVFSGSLSTAMSIVGSDFVTKSGFMFAGERVWNKVKWGQDKGGDSTKRSLAKAVLWRVFAASNTLICGVFLAKDLSIASKIAGTDTIFKTGLFFLNERLWTKINWGKEYEPEYYL 989 E +P + E+ RS VKA AWR+ AG VT + L FSGSL+TA+SIVGSDF +KS MF GER+ NK G+ GGD RSLAKA++WR+FA NTL +F+AKD+SIASKIAG+D IFKT L F ER W K+ WGKEY+P + + Sbjct: 33 ESAPQGSFSETTARSAVKAFAWRIIAGAVTFFTSLRFSGSLATALSIVGSDFFSKSFTMFIGERLMNKSNAGRTAGGDGAGRSLAKALIWRLFAICNTLTMAIFVAKDISIASKIAGSDAIFKTALMFFYERAWAKVEWGKEYDPGFSI 181
BLAST of mRNA_L-elsbetiae_contig611.14668.1 vs. uniprot
Match: A0A7R9ZQR0_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZQR0_9STRA) HSP 1 Score: 173 bits (439), Expect = 3.130e-48 Identity = 85/149 (57.05%), Postives = 106/149 (71.14%), Query Frame = 3 Query: 543 EESPALVYGESATRSFVKALAWRLTAGVVTLISGLVFSGSLSTAMSIVGSDFVTKSGFMFAGERVWNKVKWGQDKGGDSTKRSLAKAVLWRVFAASNTLICGVFLAKDLSIASKIAGTDTIFKTGLFFLNERLWTKINWGKEYEPEYYL 989 E +P + E+ RS VKA AWR+ AG VT + L FSGSL+TA+SIVGSDF +KS MF GER+ NK G+ GGD RSLAKA++WR+FA NTL +F+AKD+SIASKIAG+D IFKT L F ER W K+ WGKEY+P + + Sbjct: 125 ESAPQGSFSETTARSAVKAFAWRIIAGAVTFFTSLRFSGSLATALSIVGSDFFSKSFTMFIGERLMNKSNAGRTAGGDGAGRSLAKALIWRLFAICNTLTMAIFVAKDISIASKIAGSDAIFKTALMFFYERAWAKVEWGKEYDPGFSI 273
BLAST of mRNA_L-elsbetiae_contig611.14668.1 vs. uniprot
Match: A0A448ZGE6_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZGE6_9STRA) HSP 1 Score: 172 bits (436), Expect = 5.700e-48 Identity = 85/149 (57.05%), Postives = 109/149 (73.15%), Query Frame = 3 Query: 543 EESPALVYGESATRSFVKALAWRLTAGVVTLISGLVFSGSLSTAMSIVGSDFVTKSGFMFAGERVWNKVKWGQDKGGDSTKRSLAKAVLWRVFAASNTLICGVFLAKDLSIASKIAGTDTIFKTGLFFLNERLWTKINWGKEYEPEYYL 989 + +PA + E+ RS VKAL WR+ AG VT I+ FSGS++TA+SIVGSDF++KS MF GER+ NK + G+ G D RSL KA++WR+FA NTL +F+AKD+SIASKIAG+D IFKT L F+ ER+W KI WGKEY+ EY L Sbjct: 110 DSTPAANFSETTGRSAVKALMWRVIAGSVTFITSFKFSGSVATALSIVGSDFLSKSFTMFIGERLMNKSQAGRKSGADGAGRSLMKALVWRLFAICNTLTMAIFIAKDISIASKIAGSDAIFKTALMFVYERVWAKIEWGKEYQVEYNL 258
BLAST of mRNA_L-elsbetiae_contig611.14668.1 vs. uniprot
Match: A0A1E7EW78_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EW78_9STRA) HSP 1 Score: 167 bits (424), Expect = 3.930e-47 Identity = 78/142 (54.93%), Postives = 107/142 (75.35%), Query Frame = 3 Query: 564 YGESATRSFVKALAWRLTAGVVTLISGLVFSGSLSTAMSIVGSDFVTKSGFMFAGERVWNKVKWGQDKGGDSTKRSLAKAVLWRVFAASNTLICGVFLAKDLSIASKIAGTDTIFKTGLFFLNERLWTKINWGKEYEPEYYL 989 + E+ RS VKAL WR+ AG VT I+ L FSGS+ TA++IVGSDF++K+ MF GER+ NK G++ G D RSL KA++WR+FA NTL +F+AKD+++ASKIAG+D IFKTGL F+ ER+W KI WGKEY+ ++++ Sbjct: 44 FSETTARSAVKALMWRVIAGSVTFITSLRFSGSMKTALTIVGSDFLSKAFTMFIGERLMNKSNAGRESGADGAGRSLMKALVWRLFAICNTLTMAIFIAKDITMASKIAGSDAIFKTGLMFVYERVWAKIEWGKEYQVDFFI 185
BLAST of mRNA_L-elsbetiae_contig611.14668.1 vs. uniprot
Match: A0A7S2ULV0_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2ULV0_9STRA) HSP 1 Score: 166 bits (421), Expect = 4.750e-47 Identity = 80/142 (56.34%), Postives = 105/142 (73.94%), Query Frame = 3 Query: 564 YGESATRSFVKALAWRLTAGVVTLISGLVFSGSLSTAMSIVGSDFVTKSGFMFAGERVWNKVKWGQDKGGDSTKRSLAKAVLWRVFAASNTLICGVFLAKDLSIASKIAGTDTIFKTGLFFLNERLWTKINWGKEYEPEYYL 989 + E+A RS VKA AWR+ AG VT I+ L FSGS+ TA++IVGSDF +K+ MF GER+ NK + G+ G D RSL KA+LWRVFA +NTL +F++KD+++ASKIAG+D IFKTGL F ER+W KI WGK+Y E+ + Sbjct: 17 FSETAVRSIVKAFAWRIIAGSVTFITSLRFSGSMRTALTIVGSDFFSKAATMFIGERLMNKSQAGRTGGADDVGRSLMKALLWRVFAIANTLTMAIFISKDITMASKIAGSDAIFKTGLMFFYERVWAKIEWGKDYLIEFSI 158
BLAST of mRNA_L-elsbetiae_contig611.14668.1 vs. uniprot
Match: A0A7S1Y2U4_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y2U4_9STRA) HSP 1 Score: 169 bits (428), Expect = 6.960e-47 Identity = 85/146 (58.22%), Postives = 105/146 (71.92%), Query Frame = 3 Query: 552 PALVYGESATRSFVKALAWRLTAGVVTLISGLVFSGSLSTAMSIVGSDFVTKSGFMFAGERVWNKVKWGQDKGGDSTKRSLAKAVLWRVFAASNTLICGVFLAKDLSIASKIAGTDTIFKTGLFFLNERLWTKINWGKEYEPEYYL 989 P + E+ RS VKA WRL AG VT ++ L FSGSL TA++IVGSDF +K+ MF GER+ NK G+ G D KRSLAKA+LWR+FA +NTL VF+AKDLS+ASKIAG+D IFKT L F ER+W KI WGKEY+ E+ + Sbjct: 105 PGGTFSETTGRSAVKAFCWRLIAGSVTFVTSLRFSGSLKTALTIVGSDFFSKAFTMFIGERLMNKSNAGRKGGADDVKRSLAKALLWRLFAIANTLTMAVFIAKDLSMASKIAGSDAIFKTALMFGYERVWAKIEWGKEYQVEFSI 250 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig611.14668.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig611.14668.1 >prot_L-elsbetiae_contig611.14668.1 ID=prot_L-elsbetiae_contig611.14668.1|Name=mRNA_L-elsbetiae_contig611.14668.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=279bp MMIPPHERPATTTRTMKILLLCAMAASSLGFTVPPAAPPAALAARVHPARback to top mRNA from alignment at L-elsbetiae_contig611:30357..36158+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig611.14668.1 ID=mRNA_L-elsbetiae_contig611.14668.1|Name=mRNA_L-elsbetiae_contig611.14668.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5802bp|location=Sequence derived from alignment at L-elsbetiae_contig611:30357..36158+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig611:30357..36158+ >mRNA_L-elsbetiae_contig611.14668.1 ID=mRNA_L-elsbetiae_contig611.14668.1|Name=mRNA_L-elsbetiae_contig611.14668.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1674bp|location=Sequence derived from alignment at L-elsbetiae_contig611:30357..36158+ (Laminarionema elsbetiae ELsaHSoW15)back to top |