mRNA_L-elsbetiae_contig6108.14662.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig6108.14662.1
Unique NamemRNA_L-elsbetiae_contig6108.14662.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig6108.14662.1 vs. uniprot
Match: D7FT11_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT11_ECTSI)

HSP 1 Score: 263 bits (671), Expect = 6.400e-79
Identity = 194/425 (45.65%), Postives = 249/425 (58.59%), Query Frame = 1
Query:   31 MSELHLAARAGSTERTIAVLSRGVTDIDQGTSPDGVTPLMVAASLGYSRIVGILLNKGATVAIMNGDGFTALH-CSAQQGHLTVTNLLVKAGADLEAATYTLGCXXXXXXXXXXXXXXXXXXXXXXTNPNIQRLDGGXXXXXXXXXXXXXXXXXXXXXXXXXLLTFSSPCG-AGFVPLDIAAENGQLKVVDELIQELGMEGCGGVSGGVNALAGAAKNQHVEIMGMLTSAGVVDTGVALTTAARSGRESSVKFLLLQWERKTSGQGTD--YLEYRDPSSMTALLWSVHQACLSCSPRITRLLVDAGANTTTTVRLADGEGRVFFDDTPLIFSADLFRGKNV-DGKDATEKEIHNLKATRRLLMRVEAIHAVSWLWASDAPSVAHAA-TEPKSXXXXXXXXXXXXLPVLRRRALRPRVLLAALFKW 1287
            +++LH A   GS E T AVL+ G  +IDQ  S  G TPLM+A   G+SRI  +L+ KGA V+I +  GFTALH C A++    +  LL KAGADL+A     G           XXXXXXXXXXXX NP+ Q  DG                          LL  +SP G    VPLD+AA++G   VV ELIQELG+EGC   S G +ALA AA NQH++IM +LT AGVVDTG AL  AA  G E+SVKFLL +   K  G G +  YL  RD +  T L+    Q C S +PRI R+LVDAGA+TT+ V++ + +G V F+DTPL F+    R K V DGK AT++ +  L+A  RLL+RV+A+HAVSWLW S AP +  A  T+P+             LP+L+RR  R   L+A L ++
Sbjct:  106 LNQLHRAVLVGSAELTQAVLAGGTVEIDQRNSY-GATPLMMAVHNGHSRIAKMLIKKGANVSIADKRGFTALHFCCAREEDDAIVKLLAKAGADLDAIIPGEGSAPLHRATHHEXXXXXXXXXXXXXNPDCQLPDGSTALHIAAEEGQVAVMRELLRGNANPLLIQTSPPGNTTTVPLDLAAKHGHTDVVRELIQELGIEGCDATSAGAHALAFAASNQHLDIMAILTEAGVVDTGKALYLAAGMGHEASVKFLL-RHRHKEGGCGVEGAYLNARDVNGYTPLVVCT-QGCFSQAPRIVRMLVDAGADTTSPVQVMNLKGGVVFNDTPLAFTKLRLRKKIVADGKPATKEHLQRLEAICRLLLRVDAVHAVSWLWPSGAPFIGRATETDPEPPLPALKLM----LPILKRRTKRRCGLVATLLRY 523          
BLAST of mRNA_L-elsbetiae_contig6108.14662.1 vs. uniprot
Match: A0A6H5KJA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJA9_9PHAE)

HSP 1 Score: 226 bits (575), Expect = 9.790e-66
Identity = 184/432 (42.59%), Postives = 238/432 (55.09%), Query Frame = 1
Query:    1 PLPHSWPRVPMSELHLAARAGSTERTIAVLSRGVTDIDQGTSPDGVTPLMVAASLGYSRIVGILLNKGATVAIMNGDGFTALHCSAQQGHLTVTNLLVKAGADLEAATYTLGCXXXXXXXXXXXXXXXXXXXXXXTNPNIQRLDGGXXXXXXXXXXXXXXXXXXXXXXXXXLLT-FSSPCGAGFVPLDIAAENGQLKVVDELIQELGMEGCGGVSGGVNALAGAAKNQHVEIMGMLTSAGVVDTGVALTTAARSGRESSVKFLLLQWERKTSGQGTDYLEYRDPSSMTALLWSVHQACLSCSPRITRLLVDAGANTTTTVRLADGEGRVFFDDTPLIFSADLFRGK-NVDGKD-ATEKEIHNLKATRRLLMRVEAIHAVSWLWASDAPSVAHAATEPKSXXXXXXXXXXXXLPVLRRRALRPRVLLAALFKW 1287
            P P   PR P + LH AA  GS E T  VL+ G  DIDQG    G T LM+A+  GY+RIVG++LNKGA V+I                              +EA T    CXXXXXXXXXXXXXXXXXXXXXX N N +R DG                          LLT    P G  F+PLD AAENG  +VV+ELI+++G++GCGG SGGV AL  AA+ +++ IM +LT+AGVVDTG+AL  AA  G E+ +KFLL Q   + +     Y+  RD   +T LLW +        PR+ RLLV+AGA+TT+ V + +  G      TPL  + +  R K  V G+  A+ +++H L+A RRLL+RVEA+HAVSWLW SD  ++  AA                 + V RRRA   +V LAAL ++
Sbjct:    5 PRPQQRPRGPSNRLHAAAECGSFEATATVLASGAFDIDQGNEY-GWTALMLASRGGYARIVGMILNKGAQVSITXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVEATTTQHLCXXXXXXXXXXXXXXXXXXXXXXXNLNSRRSDGATPLYTAAWKGNVDAARLLLLAKADPLLTTVPDPSGRTFLPLDAAAENGHPEVVNELIRQVGIDGCGGSSGGVRALQQAAQFKNLNIMVILTNAGVVDTGLALVVAAGYGGETPLKFLLEQARARKTMDEAAYVNTRDRGGVTPLLWGIQHY----RPRVVRLLVEAGADTTSPVAVRNQLGGDDVSITPLGLTMNPVRDKVKVVGRGPASPEQLHKLEAIRRLLLRVEAVHAVSWLWPSDISTITRAAARGTDRTTAISTAVTLPMLVTRRRARGRKVPLAALLRY 431          
BLAST of mRNA_L-elsbetiae_contig6108.14662.1 vs. uniprot
Match: D7G1I8_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1I8_ECTSI)

HSP 1 Score: 221 bits (564), Expect = 1.400e-64
Identity = 182/392 (46.43%), Postives = 220/392 (56.12%), Query Frame = 1
Query:    1 PLPHSWPRVPMSELHLAARAGSTERTIAVLSRGVTDIDQGTSPDGVTPLMVAASLGYSRIVGILLNKGATVAIMNGDGFTALHCSAQQGHLTVTNLLVKAGADLEAATYTLGCXXXXXXXXXXXXXXXXXXXXXXTNPNIQRLDGGXXXXXXXXXXXXXXXXXXXXXXXXXLLTFSSPCGAGFVPLDIAAENGQLKVVDELIQELGMEGCGGVSGGVNALAGAAKNQHVEIMGMLTSAGVVDTGVALTTAARSGRESSVKFLLLQWERKTSGQGTDYLEYRDPSSMTALLWSVHQACLSCSPRITRLLVDAGANTTTTVRLADGEGRVFFDDTPLIFSADLFRGKN-VDGKDATEKEIHNLKATRRLLMRVEAIHAVSWLWASDAPSVAHAA 1173
            P    WPR P +ELH AA  GST+RT A+LS G+ +I+QG  PDG TPLMVA+  GY+RIV IL+ +GA V I+   GFTA                  AGADLEAAT T G            XXXXXXXXXXX N N +R D   XXXXXXXXXXXXXXXXXXX     LL   +     FVPLD AA  G+  VV E + +LG++GCGG S G +AL  AAK Q V+ M +L +AGVVDTG+AL  A +  RE S+KFLL Q + + +  G    E RDP   T LL S+                             + EG V           D + G+N V G+D TE++ H L A  RLL+RVEA+HA SWLW SDAP +AH A
Sbjct:    4 PAQEKWPRGPKNELHFAADTGSTQRTAAILSSGLININQG-DPDGWTPLMVASQRGYTRIVRILVKEGANVLIVADLGFTAXXXXXXXXXXXXXXXXXNAGADLEAATSTNGSRPLHLAADKGHXXXXXXXXXXXXNLNSRRFDRATXXXXXXXXXXXXXXXXXXXAKADPLLIRLNVSRDRFVPLDAAAGKGRSLVVREFLDQLGIDGCGGPSRGAHALYHAAKEQFVDTMAVLANAGVVDTGIALIGAIKENREGSIKFLLRQQQLQGNPTGAYVDEARDPFGRTPLLCSI-----------------------------EDEGLV-----------DHYLGENRVIGRDITEEQAHKLNAVHRLLLRVEAVHAASWLWVSDAPDIAHTA 354          
BLAST of mRNA_L-elsbetiae_contig6108.14662.1 vs. uniprot
Match: A0A6H5KQV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQV0_9PHAE)

HSP 1 Score: 217 bits (553), Expect = 2.650e-62
Identity = 147/394 (37.31%), Postives = 201/394 (51.02%), Query Frame = 1
Query:    1 PLPHSWPRVPMSELHLAARAGSTERTIAVLSRGVTDIDQGTSPDGVTPLMVAASLGYSRIVGILLNKGATVAIMNGDGFTALHCSAQQGHLTVTNLLVKAGADLEAATYTLGCXXXXXXXXXXXXXXXXXXXXXXTNPNIQRLDGGXXXXXXXXXXXXXXXXXXXXXXXXXLLTFSSPCGAG-FVPLDIAAENGQLKVVDELIQELGMEGCGGVSGGVNALAGAAKNQHVEIMGMLTSAGVVDTGVALTTAARSGRESSVKFLLLQWERKTSGQGTDYLEYRDPSSMTALLWSVHQACLSCSPRITRLLVDAGANTTTTVRLADGEGRVFFDDTPLIFSADLFRGKNVDGKDATEKEIHNLKATRRLLMRVEAIHAVSWLWASDAPSVAHAATE 1179
            PLP  WP  P + L  AA  GS +    +L+ G  DIDQG    G TPLM+A+  GY RIV +LLNKGA V + +                          A L+AAT    C                      +N N +R DG                          LLT +S  G   F+PLD+AA+NG  +VV+ELI+++G++GCGG SGG NAL  AA    ++IM +LT AGVVDTG+AL  AA  G E+ +KFLL Q   + S     Y+   +   +T+LL  + +    C PR+ +LLV+AGA+TT+ V + +  G   F  TPL  +  L  G++   K  T +E + L+  RRLL+R EA+HAVSWLW SD P++ HA  +
Sbjct:    5 PLPQQWPHGPSNPLQAAADCGSFKTAANLLASGAFDIDQGNEV-GWTPLMMASRGGYPRIVRMLLNKGAQVWVTDXXXXXXXXXXXXXXXXXXXXXXXXXXALLDAATKQNHCTPLDCAAETGCAASVTALLKAGSNINTRRSDGATPLYTAAWNGNVVAVWLLLLAKADPLLTCASDSGKERFLPLDVAAQNGHREVVNELIRQVGIDGCGGSSGGENALRQAALFSRLDIMAILTDAGVVDTGLALVVAAGYGGEAPLKFLLEQARGRKSTDRAAYMNTLNGVGLTSLLDGIQR----CRPRVVQLLVEAGADTTSPVLICNQPGEDDFHITPLGLTMCLLGGRSA--KPLTMEEQNKLEVIRRLLLREEAVHAVSWLWPSDTPTITHATAK 391          
BLAST of mRNA_L-elsbetiae_contig6108.14662.1 vs. uniprot
Match: D8LJF9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJF9_ECTSI)

HSP 1 Score: 203 bits (517), Expect = 2.610e-57
Identity = 179/422 (42.42%), Postives = 229/422 (54.27%), Query Frame = 1
Query:   31 MSELHLAARAGSTERTIAVLSRGVTDIDQGTSPDGVTPLMVAASLGYSRIVGILLNKGATVAIMNGDGFTALHCSAQQGHLTVTNLLVKAGADLEAATYTLGCXXXXXXXXXXXXXXXXXXXXXXTNPNIQRLDGGXXXXXXXXXXXXXXXXXXXXXXXXXLLTFSSPCGAGFVPLDIAAENGQLKVVDELIQELGMEGCGGVSGGVNALAGAAKNQHVEIMGMLTSAGVVDTGVALTTAARSGRESSVKFLLLQWERKTSGQGTDYLEYRDPSSMTALLWSVHQACL---SCSPRITRLLVDAGANTTTTVRLADGEGRVFFDDTPLIFSADLFRGKNVDGKDATEKEIHNLKATRRLLMRVEAIHAVSWLWAS---DAPSVAHAATEPKSXXXXXXXXXXXXLPVLRRRALRPRVLLAAL 1278
            M+ LH AA  GSTERT  +L+ G  DI+QGT  +  TPL+ AAS+G+S ++GILL+KGA V+I+   G TALH                              XXXXXXXXXXXXXXXXXXXXXX       +DG                          L+T  +P     +PLD AA NG L V+ ELIQ +G+EGCGG S G  AL  A + + V  M +LT AGVVDTG ALT +A  GRE+SVK+LL Q   K  G G  Y+  RD +  T LL S++   +   S  PR+ RLLV+AGA+TTT +R  +  G V F  TPL  +  + + K VDG   +++ +  L+  RRLL++VEA+HA SWLW S   D       A E  +            LP+LRRRA RP V+  AL
Sbjct:    1 MNSLHDAAFKGSTERTAELLATGSWDINQGTV-NNWTPLIFAASMGHSSVLGILLSKGANVSIVTDTGVTALHVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVDIRTPVDGETPLFRAMTEGQLEATRELLRANANPLIT-RAPLPT-LLPLDSAARNGNLLVMRELIQRVGIEGCGGQSRGEVALLMAGEGRRVAAMALLTHAGVVDTGQALTISAGLGREASVKYLL-QNHAKHYGPGA-YVNVRDRNGTTPLLSSIYVCGVDEQSSFPRVARLLVEAGADTTTELRRTNSMGVVLFSCTPLKLTVHILQDKKVDGTYISKQRLWRLEGIRRLLLQVEAVHAESWLWPSSSGDGGRRPDNAAEVTTATNAAAPKLGRVLPILRRRARRPGVVWTAL 417          
BLAST of mRNA_L-elsbetiae_contig6108.14662.1 vs. uniprot
Match: D8LPL4_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPL4_ECTSI)

HSP 1 Score: 202 bits (514), Expect = 5.910e-57
Identity = 183/387 (47.29%), Postives = 244/387 (63.05%), Query Frame = 1
Query:   16 WPRVPMSELHLAARAGSTERTIAVLSRGVTDIDQGTSPDGVTPLMVAASLGYSRIVGILLNKGATVAIMNGDGFTALHCSAQQGHLTVTNLLVKAGADLEAATYTLGCXXXXXXXXXXXXXXXXXXXXXXTNPNIQRLDGGXXXXXXXXXXXXXXXXXXXXXXXXXLLTFSSPCGAGFVPLDIAAENGQLKVVDELIQELGMEGCGGVSGGVNALAGAAKNQHVEIMGMLTSAGVVDT-GVALTTAARSGRESSVKFLLLQWERKTSGQGTDYLEYRDPSSMTALLWS-VHQACLSCSPRITRLLVDAGANTTTTVRLADGEGRVFFDDTPLIFSADLFRGKNVDGKDATEKEIHNLKATRRLLMRVEAIHAVSWLWASDAPSVAHA 1170
            +PR P + LH AA  GS E+   ++S G   I+QG SP+G TPLM+AA  GYSRIV  LL+KGA   IM  +G TALH SA+ GH+ V+ +L++AGAD+  + +T G XXXXXXXXXXXXXXXXXXXXXX     +RL+ G XXXXXXXXXXXXXXXXXXXXXXXX    +     G+VPLD+A E  ++ +V EL+ ++G+EGCGG  GG+ AL  AA+N H++I+ +L   GVVD+ G+AL  A   G E +VK LL +     S  G+ Y      S    LL   V  +    S R+ R L+DAGA T  T    + EG      T L     L R K   G   T+++++ L+  R+L+++V+A+HAVSW WA+ + + A A
Sbjct:    8 YPRGPWTALHSAANDGSFEQVFGIVSSGSVQINQG-SPEGWTPLMLAADGGYSRIVSFLLHKGAIAGIMGDEGVTALHVSARNGHVVVSLMLIRAGADVGLSCFTSGGXXXXXXXXXXXXXXXXXXXXXXXXXVDRRLEDGAXXXXXXXXXXXXXXXXXXXXXXXXXXIATME---GYVPLDVATEKFRVDIVRELVDDVGIEGCGGSDGGMVALRLAAQNGHLDILHILHERGVVDSSGLALCAALMHGGEKTVKLLLQRAAEYFSCGGSSYANSAVGSIGKPLLSCLVRDSLRGSSRRVMRRLIDAGATTDFTFTRINYEGNFMCQTTALDMVTTLLRDKGSGGPSFTQQQMYGLRGMRQLMLQVDAVHAVSWGWATRSAATAAA 390          
BLAST of mRNA_L-elsbetiae_contig6108.14662.1 vs. uniprot
Match: A0A6H5JL33_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL33_9PHAE)

HSP 1 Score: 195 bits (495), Expect = 3.620e-54
Identity = 172/373 (46.11%), Postives = 208/373 (55.76%), Query Frame = 1
Query:   16 WPRVPMSELHLAARAGSTERTIAVL-SRGVTDIDQGTSPDGVTPLMVAASLGYSRIVGILLNKGATVAIMNGDGFTALHCSAQQGHLTVTNLLVKAGADLEAATYTLGCXXXXXXXXXXXXXXXXXXXXXXTNPNIQRLDGGXXXXXXXXXXXXXXXXXXXXXXXXXLLTFSSPCGAGFVPLDIAAENGQLKVVDELIQELGMEGCGGVSGGVNALAGAAKNQHVEIMGMLTSAGVVDTGVALTTAARSGRESSVKFLLLQWERKTSGQGTDYLEYRDPSSM---TALLWSVH--QACLSCSPRITRLLVDAGANTTTTVRLADGEGRVFFDDTPLIFSADLFRGKNVDGKDATEKEIHNLKATRRLLMRVEA 1116
            WPR P ++LH AA  GS ER +A+L SR    ID G    G TPLM+AA  G SR+V ILLNKGA V+++  DG TALH S Q G   V                    XXXX             XXXXX           XXXXXXXXXXXXXXXXXXX      LLT  +P G  FVPLD AAE GQ +VV ELI+++ ++GCGG SGGV AL  AA +Q+V++M +L  AGV+DTG AL TAA    E+ VK LLLQ    TS  G  Y+   D   +   T LL S+    A   CSPR+ RLLVDAGA+T + V L    G++    TP+ F+          GK A EK +H L+A  RL  +VEA
Sbjct:   11 WPRGPQNDLHRAANDGSVERVVALLASRSSIAIDAGAEY-GWTPLMLAAWRGSSRVVRILLNKGANVSVVAEDGHTALHFSTQDGGHPVVTXXXXXXXXXXXXXXXXXXXXXXLAANAGCWEVAQVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAKANPLLTKPTPSGVTFVPLDTAAEYGQTEVVRELIKQVSIKGCGGASGGVYALRLAALSQNVDVMSVLADAGVMDTGEALITAAGRNDEAGVK-LLLQQRHGTSAGGELYMYVNDTHDLVGRTPLLCSIDGGMAGFRCSPRVVRLLVDAGADTVSAVPLKGTAGQIGRSVTPIDFATCSLHENMDGGKTAMEKHVHKLRAIHRLFSQVEA 381          
BLAST of mRNA_L-elsbetiae_contig6108.14662.1 vs. uniprot
Match: D7FVK3_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVK3_ECTSI)

HSP 1 Score: 195 bits (495), Expect = 6.840e-54
Identity = 195/422 (46.21%), Postives = 240/422 (56.87%), Query Frame = 1
Query:    1 PLPHSWPRVPMSELHLAARAGSTERTIAVLSRGVTDIDQGTSPDGVTPLMVAASLGYSRIVGILLNKGATVAIMNGDGFTALHCSAQQGHLTVTNLLVKAGADLEAATYTLGCXXXXXXXXXXXXXXXXXXXXXXTNPNIQRLDGGXXXXXXXXXXXXXXXXXXXXXXXXXLLTFSSPCGAGFVPLDIAAENGQLKVVDELIQELGMEGCGGVSGGVNALAGAAKNQHVEIMGMLTSAGVVDTGVALTTAARSGRESSVKFLLLQWERKTSGQGTDYLEYRDPSSMTALLWSVHQAC-LSCSPRITRLLVDAGANTTTTVRLADGEGRVFFDDTPLIFSADLFRGKNVDGKDATEKEIHNLKATRRLLMRVEAIHAVSWLWASDAPSVA-----HAATEPKSXXXXXXXXXXXXLPVLRRRA 1248
            PL    PRV +++LH AAR GST  T A+LS G  DID G S  G TPLM A    +  +V ILL+KGA+V+ +N +G TALH SA  G++ V                    XXXXXXXXXXXXXXXXXXXXXX           XXXXXXXXXXXXXXXXXXX      LLT  +      +PLD AA+NG+L VV EL+Q  G+ GCGG +GGV AL  AA   H+++M  LT+AGVVDTG+AL  A   G    VKFLL Q     S +       RDP   T L+ ++      SCSP++ RLLVDAGA+TT+ VR     G +    TPL  + +  R K    K   ++ +  L+  RRLL+RVEA+HA SWLW +  P V       AATE +S            LP+LRRRA
Sbjct:    5 PLLQQSPRVVINKLHEAARDGSTWLTAAILSTGSIDIDGGDSSGG-TPLMHAICNDHPSVVSILLSKGASVSAINDEGNTALHLSAFAGYV-VXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAKANPLLTRVNLAWQ-HLPLDTAAQNGRLGVVLELLQRFGIRGCGGGTGGVTALQLAAMKPHMDVMLALTTAGVVDTGIALVKATSFGHMDVVKFLLQQQNGTPSEKSAYVSRPRDPCGRTPLICNIDVGLNQSCSPKVVRLLVDAGADTTSIVRFTIQPGTLPVVCTPLSLATEALRIKIAYRKAIPDELLRRLELIRRLLLRVEAVHATSWLWQNGVPRVGLPAGGTAATETESSSTTAPQLRTV-LPILRRRA 422          
BLAST of mRNA_L-elsbetiae_contig6108.14662.1 vs. uniprot
Match: D7FY91_ECTSI (EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY91_ECTSI)

HSP 1 Score: 191 bits (485), Expect = 7.530e-52
Identity = 194/431 (45.01%), Postives = 236/431 (54.76%), Query Frame = 1
Query:    1 PLPHSWPRVPMSELHLAARAGSTERTIAVLS-RGVTDIDQGTSPDGVTPLMVAASLGYSRIVGILLNKGATVAIMNGDGFTALHCSAQQGHLTVTNLLVKAGADLEAATYTLGCXXXXXXXXXXXXXXXXXXXXXXTNPNIQRLDGGXXXXXXXXXXXXXXXXXXXXXXXXXL-LTFSSPCGAGFVPLDIAAENGQLKVVDELIQELGMEGCGGVSGGVNALAGAAKNQHVEIMGMLTSAGVVDTGVALTTAARSGRESSVKFLLLQWERKTSGQGTDYLEYRDPSSMTALLWSVHQACLSCSPRITRLLVDAGANTTTTVRLADGEGRVFFDDTPLIFSADLFRGKNVDGKDATEKEIHNLKATRRLLMRVEAIHAVSWLWASDAPSVAHAATEPKSXXXXXXXXXXXXLPVLRRRALRPRVLLAALFKW 1287
            P    WPR PM+ELHLAA  GS ER +A+LS R   D++QG S  G TPLM+A + G+ R+V ILLN GA ++IM+  G  AL                               XXXXXXXXXXXXXXXXXXXXXX           XXXXXXXXXXXXXXXXXXXX     L     S  G  F+PLD+A       VV EL+Q LG+E CGG S GV+AL  A   +HV I+ ML  AGVVD G AL  AA  G E+SVKFLL Q E K S   + Y+   +   +T LL ++   C  CS RI RLLVDAGA+TT   RL   +G+     T L     L   K   G   T +E HNL+AT RLL++VEA HA+SW+W    P+ +H+   P              LP+ RR     R LL A+ ++
Sbjct:    5 PPTQGWPRGPMNELHLAAMDGSAERALALLSSRDPIDVNQGDSA-GCTPLMLATTNGHPRVVRILLNHGANMSIMDDVGSDALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNADPLLGNVLPSTGGVCFLPLDVAXXXXXSAVVRELLQRLGIERCGGESRGVDALCLAVTGRHVGIVAMLAHAGVVDQGSALAAAAAQGYEASVKFLLRQHEGKHSASRSAYVNKLNRFGLTPLLENI--TCGHCSARIVRLLVDAGADTTAAYRLTGKKGQAMAATTHLTAMGCLLLEKKAKGD--TGEEPHNLQATFRLLLQVEAAHAISWVW----PTGSHSVDRPPRRQRRAEAPVRLTLPMTRRDTGTRRALLGAVSRY 426          
BLAST of mRNA_L-elsbetiae_contig6108.14662.1 vs. uniprot
Match: D8LL76_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL76_ECTSI)

HSP 1 Score: 184 bits (466), Expect = 8.180e-50
Identity = 190/425 (44.71%), Postives = 236/425 (55.53%), Query Frame = 1
Query:   22 RVPMSELHLAARAGSTERTIAVLSRGVTDIDQGTSPDGVTPLMVAASLGYSRIVGILLNKGATVAIMNGDGFTALHCSAQQGHLTVTNLLVKAGADLEAATYTLGCXXXXXXXXXXXXXXXXXXXXXXTNPNIQRLDGGXXXXXXXXXXXXXXXXXXXXXXXXXLLTFSSPCGAGFVPLDIAAENGQLKVVDELIQELGMEGCGGVSGGVNALAGAAKNQHVEIMGMLTSAGVVDTGVALTTAARSGRESSVKFLLLQWERKTSGQGTDYLEY----RDPSSMTALLWSVHQACLSCSPRITRLLVDAGANTTTTVRLADGEGRVFFDDTPLIFSADLFRGKNVDGKDATEKEIHNLKATRRLLMRVEAIHAVSWLWASDAPSVAHAATEPKSXXXXXXXXXXXXLPVLRRRALRPRVLLAALFK 1284
            R P +ELH AA  GS++RT ++L+ G  DIDQG  P G TPLM AA  G+S ++ +LLN+GA++  ++ D +                                  XXXXXXXXXXXXXXXXXXXXXX           XXXXXXXXXXXXXXXXXXXXXXX  L T  S  G  FVPLD AA NG L V  EL+Q  G+ GC G S GV+AL  AA +QH+++M +L  AGVVDTG AL      GRE ++KFLL Q      G+GT    Y    RD    T LL +V      CSPR+ RLLVDAGA+ T  VR+ DG GR     TPL  +      K VD   AT +++ NL+A+RRLL++VE +HA SWLW   A   A    +               LP++ RR+ R    L  +F+
Sbjct:    9 RGPRNELHKAALDGSSQRTESLLAGGRIDIDQG-DPRGWTPLMFAAEEGHSNVIKVLLNRGASLLPVDDDDYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLLPTRMSS-GNTFVPLDGAALNGHLAVARELVQRFGIRGCAGASAGVDALGQAAVDQHLDVMALLCDAGVVDTGNALVATVFLGRERALKFLLEQ-----KGEGTARTTYASTPRDGRGHTPLLSAVTTG--PCSPRVVRLLVDAGADATLAVRVPDGFGRST-KYTPLDCATRCLAEKVVDEDFATAQQLRNLRASRRLLLQVEVVHATSWLWGGHAGCPAAPGKKRAQTESTNGKPLKSRLPIMWRRSARRGAALPGVFR 423          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6108.14662.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FT11_ECTSI6.400e-7945.65EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5KJA9_9PHAE9.790e-6642.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G1I8_ECTSI1.400e-6446.43EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6H5KQV0_9PHAE2.650e-6237.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LJF9_ECTSI2.610e-5742.42EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D8LPL4_ECTSI5.910e-5747.29EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6H5JL33_9PHAE3.620e-5446.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FVK3_ECTSI6.840e-5446.21EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D7FY91_ECTSI7.530e-5245.01EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY... [more]
D8LL76_ECTSI8.180e-5044.71EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6108contigL-elsbetiae_contig6108:1537..2835 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score266.9
Seed ortholog evalue1.6e-68
Seed eggNOG ortholog2880.D7FT11
Hectar predicted targeting categoryother localisation
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG4177@2759
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons1
Model size1299
Cds size1269
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816668.2652476-UTR-L-elsbetiae_contig6108:1536..15661622816668.2652476-UTR-L-elsbetiae_contig6108:1536..1566Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6108 1537..1566 +
1691683726.2042465-UTR-L-elsbetiae_contig6108:1536..15661691683726.2042465-UTR-L-elsbetiae_contig6108:1536..1566Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6108 1537..1566 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816668.2765002-CDS-L-elsbetiae_contig6108:1566..28351622816668.2765002-CDS-L-elsbetiae_contig6108:1566..2835Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6108 1567..2835 +
1691683726.220605-CDS-L-elsbetiae_contig6108:1566..28351691683726.220605-CDS-L-elsbetiae_contig6108:1566..2835Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6108 1567..2835 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6108.14662.1prot_L-elsbetiae_contig6108.14662.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig6108 1567..2835 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig6108.14662.1

>prot_L-elsbetiae_contig6108.14662.1 ID=prot_L-elsbetiae_contig6108.14662.1|Name=mRNA_L-elsbetiae_contig6108.14662.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=423bp
MSELHLAARAGSTERTIAVLSRGVTDIDQGTSPDGVTPLMVAASLGYSRI
VGILLNKGATVAIMNGDGFTALHCSAQQGHLTVTNLLVKAGADLEAATYT
LGCTPLHLAAEQGHAEMMGVLIEAGTNPNIQRLDGGTPLHAAAQAGHMYA
TKVLLRAKANPLLTFSSPCGAGFVPLDIAAENGQLKVVDELIQELGMEGC
GGVSGGVNALAGAAKNQHVEIMGMLTSAGVVDTGVALTTAARSGRESSVK
FLLLQWERKTSGQGTDYLEYRDPSSMTALLWSVHQACLSCSPRITRLLVD
AGANTTTTVRLADGEGRVFFDDTPLIFSADLFRGKNVDGKDATEKEIHNL
KATRRLLMRVEAIHAVSWLWASDAPSVAHAATEPKSKTKTTPTPLMLMLP
VLRRRALRPRVLLAALFKWVAV*
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mRNA from alignment at L-elsbetiae_contig6108:1537..2835+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig6108.14662.1 ID=mRNA_L-elsbetiae_contig6108.14662.1|Name=mRNA_L-elsbetiae_contig6108.14662.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1299bp|location=Sequence derived from alignment at L-elsbetiae_contig6108:1537..2835+ (Laminarionema elsbetiae ELsaHSoW15)
CCCCTCCCGCATAGCTGGCCACGAGTTCCTATGAGTGAGCTGCATCTTGC CGCGCGTGCTGGTTCCACTGAGCGTACAATAGCCGTGCTCTCGAGGGGAG TGACCGACATCGATCAAGGCACGTCACCGGATGGCGTCACTCCTCTTATG GTCGCCGCCAGCTTAGGTTACTCGCGTATCGTCGGGATACTTCTGAACAA GGGAGCCACCGTGGCAATAATGAATGGTGACGGTTTTACCGCTCTGCATT GTTCGGCTCAACAAGGGCATCTGACTGTGACAAATCTGCTGGTGAAGGCC GGCGCCGACCTGGAAGCGGCGACCTATACTTTAGGCTGCACACCGCTTCA CCTGGCTGCGGAACAAGGGCACGCGGAGATGATGGGAGTGTTGATCGAGG CAGGAACGAATCCCAATATCCAAAGGTTGGATGGAGGGACACCGCTGCAC GCTGCGGCTCAGGCAGGGCACATGTATGCGACTAAGGTGCTCCTTCGTGC GAAAGCGAACCCGCTGTTGACCTTCTCGAGCCCGTGCGGGGCTGGTTTTG TCCCTCTAGACATAGCGGCGGAAAACGGGCAATTGAAGGTCGTAGACGAG CTAATCCAGGAGCTGGGGATGGAGGGATGTGGAGGTGTCAGCGGCGGTGT GAATGCTCTCGCAGGGGCTGCCAAGAACCAGCACGTGGAAATCATGGGTA TGCTGACCAGCGCCGGAGTGGTCGACACGGGTGTAGCCTTAACAACTGCC GCAAGATCTGGCCGAGAATCATCGGTAAAGTTCCTGTTGCTGCAGTGGGA GCGGAAAACAAGCGGCCAAGGAACTGACTACCTGGAATACCGCGACCCTT CCAGCATGACAGCCTTGCTATGGAGTGTTCATCAGGCTTGCCTCTCATGC TCTCCCAGAATCACGAGGTTGCTCGTGGATGCCGGAGCAAACACAACGAC TACCGTTCGACTCGCAGACGGTGAGGGCAGGGTGTTTTTCGACGACACGC CCCTAATTTTCAGTGCCGATTTGTTCCGTGGAAAAAATGTCGACGGAAAG GATGCCACAGAAAAAGAGATACACAACCTGAAGGCGACTCGGCGGTTGCT GATGAGGGTGGAGGCCATTCATGCGGTCTCTTGGCTGTGGGCAAGCGACG CCCCCTCCGTCGCCCACGCTGCTACAGAGCCCAAAAGCAAAACCAAGACG ACCCCGACCCCGCTGATGCTGATGTTGCCGGTCCTGAGGAGAAGGGCTCT AAGGCCCAGGGTGCTCTTGGCTGCCCTGTTCAAGTGGGTGGCGGTGTGA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig6108:1537..2835+

>mRNA_L-elsbetiae_contig6108.14662.1 ID=mRNA_L-elsbetiae_contig6108.14662.1|Name=mRNA_L-elsbetiae_contig6108.14662.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2538bp|location=Sequence derived from alignment at L-elsbetiae_contig6108:1537..2835+ (Laminarionema elsbetiae ELsaHSoW15)
ATGAGTGAGCTGCATCTTGCCGCGCGTGCTGGTTCCACTGAGCGTACAAT
AGCCGTGCTCTCGAGGGGAGTGACCGACATCGATCAAGGCACGTCACCGG
ATGGCGTCACTCCTCTTATGGTCGCCGCCAGCTTAGGTTACTCGCGTATC
GTCGGGATACTTCTGAACAAGGGAGCCACCGTGGCAATAATGAATGGTGA
CGGTTTTACCGCTCTGCATTGTTCGGCTCAACAAGGGCATCTGACTGTGA
CAAATCTGCTGGTGAAGGCCGGCGCCGACCTGGAAGCGGCGACCTATACT
TTAGGCTGCACACCGCTTCACCTGGCTGCGGAACAAGGGCACGCGGAGAT
GATGGGAGTGTTGATCGAGGCAGGAACGAATCCCAATATCCAAAGGTTGG
ATGGAGGGACACCGCTGCACGCTGCGGCTCAGGCAGGGCACATGTATGCG
ACTAAGGTGCTCCTTCGTGCGAAAGCGAACCCGCTGTTGACCTTCTCGAG
CCCGTGCGGGGCTGGTTTTGTCCCTCTAGACATAGCGGCGGAAAACGGGC
AATTGAAGGTCGTAGACGAGCTAATCCAGGAGCTGGGGATGGAGGGATGT
GGAGGTGTCAGCGGCGGTGTGAATGCTCTCGCAGGGGCTGCCAAGAACCA
GCACGTGGAAATCATGGGTATGCTGACCAGCGCCGGAGTGGTCGACACGG
GTGTAGCCTTAACAACTGCCGCAAGATCTGGCCGAGAATCATCGGTAAAG
TTCCTGTTGCTGCAGTGGGAGCGGAAAACAAGCGGCCAAGGAACTGACTA
CCTGGAATACCGCGACCCTTCCAGCATGACAGCCTTGCTATGGAGTGTTC
ATCAGGCTTGCCTCTCATGCTCTCCCAGAATCACGAGGTTGCTCGTGGAT
GCCGGAGCAAACACAACGACTACCGTTCGACTCGCAGACGGTGAGGGCAG
GGTGTTTTTCGACGACACGCCCCTAATTTTCAGTGCCGATTTGTTCCGTG
GAAAAAATGTCGACGGAAAGGATGCCACAGAAAAAGAGATACACAACCTG
AAGGCGACTCGGCGGTTGCTGATGAGGGTGGAGGCCATTCATGCGGTCTC
TTGGCTGTGGGCAAGCGACGCCCCCTCCGTCGCCCACGCTGCTACAGAGC
CCAAAAGCAAAACCAAGACGACCCCGACCCCGCTGATGCTGATGTTGCCG
GTCCTGAGGAGAAGGGCTCTAAGGCCCAGGGTGCTCTTGGCTGCCCTGTT
CAAGTGGGTGGCGGTGTGAATGAGTGAGCTGCATCTTGCCGCGCGTGCTG
GTTCCACTGAGCGTACAATAGCCGTGCTCTCGAGGGGAGTGACCGACATC
GATCAAGGCACGTCACCGGATGGCGTCACTCCTCTTATGGTCGCCGCCAG
CTTAGGTTACTCGCGTATCGTCGGGATACTTCTGAACAAGGGAGCCACCG
TGGCAATAATGAATGGTGACGGTTTTACCGCTCTGCATTGTTCGGCTCAA
CAAGGGCATCTGACTGTGACAAATCTGCTGGTGAAGGCCGGCGCCGACCT
GGAAGCGGCGACCTATACTTTAGGCTGCACACCGCTTCACCTGGCTGCGG
AACAAGGGCACGCGGAGATGATGGGAGTGTTGATCGAGGCAGGAACGAAT
CCCAATATCCAAAGGTTGGATGGAGGGACACCGCTGCACGCTGCGGCTCA
GGCAGGGCACATGTATGCGACTAAGGTGCTCCTTCGTGCGAAAGCGAACC
CGCTGTTGACCTTCTCGAGCCCGTGCGGGGCTGGTTTTGTCCCTCTAGAC
ATAGCGGCGGAAAACGGGCAATTGAAGGTCGTAGACGAGCTAATCCAGGA
GCTGGGGATGGAGGGATGTGGAGGTGTCAGCGGCGGTGTGAATGCTCTCG
CAGGGGCTGCCAAGAACCAGCACGTGGAAATCATGGGTATGCTGACCAGC
GCCGGAGTGGTCGACACGGGTGTAGCCTTAACAACTGCCGCAAGATCTGG
CCGAGAATCATCGGTAAAGTTCCTGTTGCTGCAGTGGGAGCGGAAAACAA
GCGGCCAAGGAACTGACTACCTGGAATACCGCGACCCTTCCAGCATGACA
GCCTTGCTATGGAGTGTTCATCAGGCTTGCCTCTCATGCTCTCCCAGAAT
CACGAGGTTGCTCGTGGATGCCGGAGCAAACACAACGACTACCGTTCGAC
TCGCAGACGGTGAGGGCAGGGTGTTTTTCGACGACACGCCCCTAATTTTC
AGTGCCGATTTGTTCCGTGGAAAAAATGTCGACGGAAAGGATGCCACAGA
AAAAGAGATACACAACCTGAAGGCGACTCGGCGGTTGCTGATGAGGGTGG
AGGCCATTCATGCGGTCTCTTGGCTGTGGGCAAGCGACGCCCCCTCCGTC
GCCCACGCTGCTACAGAGCCCAAAAGCAAAACCAAGACGACCCCGACCCC
GCTGATGCTGATGTTGCCGGTCCTGAGGAGAAGGGCTCTAAGGCCCAGGG
TGCTCTTGGCTGCCCTGTTCAAGTGGGTGGCGGTGTGA
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