mRNA_L-elsbetiae_contig6106.14659.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig6106.14659.1
Unique NamemRNA_L-elsbetiae_contig6106.14659.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig6106.14659.1 vs. uniprot
Match: A0A6H5KJA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJA9_9PHAE)

HSP 1 Score: 159 bits (403), Expect = 1.460e-38
Identity = 122/289 (42.21%), Postives = 155/289 (53.63%), Query Frame = 2
Query:  533 DVESVTALLRGNADPLLATTDSSSGIRFTPLEAAAAKGHSKTVLELIQHVGIEGCGGESGGGVERALDCAAHHQHVNVMAVLMGAGVVDTGSALRTALLNGREGSVKFLLQQQTEENI---GPYVNNSGIDGFEMPLLFCIMSVVPHKVLIRASRTARLLVGAGANPSAAAPATNPGGIVSSHRTPITMVAFHLAQK-KFDGKA-IPEEQLHALEAIRRVMLQAEAIRALSWLWPSDVP-IDVHTAEGTRGVMTTSTPLTLMVPIMRRRAGRAARVVLLRALFRQAGRP 1381
            +V++   LL   ADPLL T    SG  F PL+AAA  GH + V ELI+ VGI+GCGG SGG   RAL  AA  +++N+M +L  AGVVDTG AL  A   G E  +KFLL+Q           YVN     G   PLL+ I    P        R  RLLV AGA+ ++     N  G      TP+ +    +  K K  G+     EQLH LEAIRR++L+ EA+ A+SWLWPSD+  I    A GT      ST +TL + + RRRA    R V L AL R + +P
Sbjct:  160 NVDAARLLLLAKADPLLTTVPDPSGRTFLPLDAAAENGHPEVVNELIRQVGIDGCGGSSGG--VRALQQAAQFKNLNIMVILTNAGVVDTGLALVVAAGYGGETPLKFLLEQARARKTMDEAAYVNTRDRGGVT-PLLWGIQHYRP--------RVVRLLVEAGADTTSPVAVRNQLGGDDVSITPLGLTMNPVRDKVKVVGRGPASPEQLHKLEAIRRLLLRVEAVHAVSWLWPSDISTITRAAARGTDRTTAISTAVTLPMLVTRRRA--RGRKVPLAALLRYSSKP 435          
BLAST of mRNA_L-elsbetiae_contig6106.14659.1 vs. uniprot
Match: D7FT11_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT11_ECTSI)

HSP 1 Score: 160 bits (405), Expect = 3.980e-38
Identity = 149/425 (35.06%), Postives = 199/425 (46.82%), Query Frame = 2
Query:  104 NRLHKAVRDGCTPRINALLSTRSNDIDERGPGGFTPLMIAVEEDLAHVIKILLTKGASVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD--VESVTALLRGNADPLLATTDSSSGIRFTPLEAAAAKGHSKTVLELIQHVGIEGCGGESGGGVERALDCAAHHQHVNVMAVLMGAGVVDTGSALRTALLNGREGSVKFLLQQQTEEN----IGPYVNNSGIDGFEMPLLFCIMSVVPHKVLIRASRTARLLVGAGANPSAAAPATNPGGIVSSHRTPITMVAFHLAQKKF-DGKAIPEEQLHALEAIRRVMLQAEAIRALSWLWPSDVPIDVHTAEGTRGVMTTSTP----LTLMVPIMRRRAGRAARVV 1345
            N+LH+AV  G      A+L+  + +ID+R   G TPLM+AV    + + K+L+ KGA+VS                                                    XXXXXXXXXXXXX                  +  V  +  LLRGNA+PLL  T         PL+ AA  GH+  V ELIQ +GIEGC   S G    AL  AA +QH+++MA+L  AGVVDTG AL  A   G E SVKFLL+ + +E      G Y+N   ++G+  PL+ C            A R  R+LV AGA+ ++     N  G V  + TP+      L +K   DGK   +E L  LEAI R++L+ +A+ A+SWLWPS  P      E      T   P    L LM+PI++RR  R   +V
Sbjct:  107 NQLHRAVLVGSAELTQAVLAGGTVEIDQRNSYGATPLMMAVHNGHSRIAKMLIKKGANVSIADKRGFTALHFCCAREEDDAIVKLLAKAGADLDAIIPGEGSAPLHRATHHEXXXXXXXXXXXXXNPDCQLPDGSTALHIAAEEGQVAVMRELLRGNANPLLIQTSPPGNTTTVPLDLAAKHGHTDVVRELIQELGIEGCDATSAGA--HALAFAASNQHLDIMAILTEAGVVDTGKALYLAAGMGHEASVKFLLRHRHKEGGCGVEGAYLNARDVNGYT-PLVVCTQGCFSQ-----APRIVRMLVDAGADTTSPVQVMNLKGGVVFNDTPLAFTKLRLRKKIVADGKPATKEHLQRLEAICRLLLRVDAVHAVSWLWPSGAPFIGRATE------TDPEPPLPALKLMLPILKRRTKRRCGLV 517          
BLAST of mRNA_L-elsbetiae_contig6106.14659.1 vs. uniprot
Match: D8LJF9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJF9_ECTSI)

HSP 1 Score: 146 bits (368), Expect = 4.810e-34
Identity = 195/434 (44.93%), Postives = 241/434 (55.53%), Query Frame = 2
Query:  104 NRLHKAVRDGCTPRINALLSTRSNDIDERGPGGFTPLMIAVEEDLAHVIKILLTKGASVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-DVESVTALLRGNADPLLATTDSSSGIRFTPLEAAAAKGHSKTVLELIQHVGIEGCGGESGGGVERALDCAAHHQHVNVMAVLMGAGVVDTGSALRTALLNGREGSVKFLLQQQTEE-NIGPYVNNSGIDGFEMPLLFCIMSVVPHKVLIRAS--RTARLLVGAGANPSAAAPATNPGGIVSSHRTPITMVAFHLAQKKFDGKAIPEEQLHALEAIRRVMLQAEAIRALSWLWPSDVPIDV----HTAEGTRGVMTTSTPLTLMVPIMRRRAGRAARVVLLRALFRQAGRP 1381
            N LH A   G T R   LL+T S DI++     +TPL+ A     + V+ ILL+KGA+VS            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                      +E+   LLR NA+PL+      +     PL++AA  G+   + ELIQ VGIEGCGG+S G  E AL  A   + V  MA+L  AGVVDTG AL  +   GRE SVK+LLQ   +    G YVN    +G   PLL    S+    V  ++S  R ARLLV AGA+ +     TN  G+V    TP+ +    L  KK DG  I +++L  LE IRR++LQ EA+ A SWLWPS          + AE T      +  L  ++PI+RRRA R    V+  AL R   +P
Sbjct:    2 NSLHDAAFKGSTERTAELLATGSWDINQGTVNNWTPLIFAASMGHSSVLGILLSKGANVSIVTDTGVTALHVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVDIRTPVDGETPLFRAMTEGQLEATRELLRANANPLITRAPLPT---LLPLDSAARNGNLLVMRELIQRVGIEGCGGQSRG--EVALLMAGEGRRVAAMALLTHAGVVDTGQALTISAGLGREASVKYLLQNHAKHYGPGAYVNVRDRNG-TTPLL---SSIYVCGVDEQSSFPRVARLLVEAGADTTTELRRTNSMGVVLFSCTPLKLTVHILQDKKVDGTYISKQRLWRLEGIRRLLLQVEAVHAESWLWPSSSGDGGRRPDNAAEVTTATNAAAPKLGRVLPILRRRARRPG--VVWTALCRHQRKP 424          
BLAST of mRNA_L-elsbetiae_contig6106.14659.1 vs. uniprot
Match: A0A6H5KQV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQV0_9PHAE)

HSP 1 Score: 145 bits (367), Expect = 1.070e-33
Identity = 118/295 (40.00%), Postives = 154/295 (52.20%), Query Frame = 2
Query:  533 DVESVTALLRGNADPLLATTDSSSGIRFTPLEAAAAKGHSKTVLELIQHVGIEGCGGESGGGVERALDCAAHHQHVNVMAVLMGAGVVDTGSALRTALLNGREGSVKFLLQQ---QTEENIGPYVNNSGIDGFEMPLLFCIMSVVPHKVLIRASRTARLLVGAGANPSAAAPATNPGGIVSSHRTPITMVAFHLAQKKFDGKAIPEEQLHALEAIRRVMLQAEAIRALSWLWPSDVPIDVH-TAEGTRGVMTTSTPLT--LMVPIMRRRAGRAARVVLLRALFRQAGRPGWLGGI 1399
            +V +V  LL   ADPLL     S   RF PL+ AA  GH + V ELI+ VGI+GCGG SGG  E AL  AA    +++MA+L  AGVVDTG AL  A   G E  +KFLL+Q   +   +   Y+N     G    LL  I    P        R  +LLV AGA+ ++     N  G    H TP+ +    L  +    K +  E+ + LE IRR++L+ EA+ A+SWLWPSD P   H TA+GT     TST  T  +M+ I RR  GR     LL AL R + +   L G+
Sbjct:  160 NVVAVWLLLLAKADPLLTCASDSGKERFLPLDVAAQNGHREVVNELIRQVGIDGCGGSSGG--ENALRQAALFSRLDIMAILTDAGVVDTGLALVVAAGYGGEAPLKFLLEQARGRKSTDRAAYMNTLNGVGLTS-LLDGIQRCRP--------RVVQLLVEAGADTTSPVLICNQPGEDDFHITPLGLTMCLLGGRS--AKPLTMEEQNKLEVIRRLLLREEAVHAVSWLWPSDTPTITHATAKGTGRTTATSTAATPFIMLMIGRRTRGRKG---LLAALLRYSSKLEALTGM 438          
BLAST of mRNA_L-elsbetiae_contig6106.14659.1 vs. uniprot
Match: D7FVU3_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVU3_ECTSI)

HSP 1 Score: 141 bits (355), Expect = 1.740e-32
Identity = 108/271 (39.85%), Postives = 145/271 (53.51%), Query Frame = 2
Query:  557 LRGNADPLLATTDSSSGIRFTPLEAAAAKGHSKTVLELIQHVGIEGCGGESGGGVERALDCAAHHQHVNVMAVLMGAGVVD-TGSALRTALLNGREGSVKFLLQQQTEENIGPYVNNSGIDGFEMPLLFCIMSVVPHKVLIRASRTARLLVGAGANPSAAAPATNPGGIVSSHRTPITMVAFHLAQKKFDGKAIPEEQLHALEAIRRVMLQAEAIRALSWLWPSDVPIDVHTAEGTRGVMTTSTPLTLMVPIMRRRAGRAARVVLLRALFR 1366
            L   A+PLL  +  SSG  F PLE AA  G S  V EL++  GI  CGG SGG    AL  AA +  V++M++LM AGVVD  G AL  A+ +G+E +V FLL+QQ E     YVN +  D     LL+   S   +K      R  R LV AGA+ ++A            + TP+  V     ++        +EQL  LEA RRV+L+  A+ A+SW+WPSD P+    A   R    + T LT ++P++RRRAGR  R +L   LFR
Sbjct:  138 LHAKANPLLTWSSESSGRSFVPLEVAAQTGRSAVVSELLREFGIRCCGGPSGG--LDALRVAAVYGQVDIMSMLMDAGVVDPVGLALLAAVGSGKEAAVGFLLRQQEERWQTSYVNIARDDDGLTALLW---SFRGNKNKPCNPRITRRLVDAGADTTSAVQLRAKRSRTCVNVTPLEYVNDWALRETNGDHPATDEQLLRLEATRRVLLRVVAVHAVSWIWPSDAPLLARPANSPRTAKHSPTQLTTVLPVLRRRAGR--RALLWDTLFR 401          
BLAST of mRNA_L-elsbetiae_contig6106.14659.1 vs. uniprot
Match: D8LL76_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL76_ECTSI)

HSP 1 Score: 140 bits (353), Expect = 4.720e-32
Identity = 211/426 (49.53%), Postives = 250/426 (58.69%), Query Frame = 2
Query:  104 NRLHKAVRDGCTPRINALLSTRSNDIDERGPGGFTPLMIAVEEDLAHVIKILLTKGASVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVESVTALLRGNADPLLATTDSSSGIRFTPLEAAAAKGHSKTVLELIQHVGIEGCGGESGGGVERALDCAAHHQHVNVMAVLMGAGVVDTGSALRTALLNGREGSVKFLLQQQTEENIGPYVNNSGIDGFEMPLLFCIMSVVPHKVLIRASRTARLLVGAGANPSAAAPATNPGGIVSSHRTPITMVAFHLAQKKFDGKAIPEEQLHALEAIRRVMLQAEAIRALSWLWPSDVPIDVHTAEGTRGVMTTST---PLTLMVPIMRRRAGRAARVVLLRALFRQA 1372
            N LHKA  DG + R  +LL+    DID+  P G+TPLM A EE  ++VIK+LL +GAS+        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX              PLL T   SSG  F PL+ AA  GH     EL+Q  GI GC G S G    AL  AA  QH++VMA+L  AGVVDTG+AL   +  GRE ++KFLL+Q+ E        ++  DG     L   ++  P        R  RLLV AGA+ + A    +  G  S+  TP+      LA+K  D      +QL  L A RR++LQ E + A SWLW          A G +   T ST   PL   +PIM RR+ R  R   L  +FR A
Sbjct:   13 NELHKAALDGSSQRTESLLAGGRIDIDQGDPRGWTPLMFAAEEGHSNVIKVLLNRGASLLPVDDDDYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLLPTR-MSSGNTFVPLDGAALNGHLAVARELVQRFGIRGCAGASAG--VDALGQAAVDQHLDVMALLCDAGVVDTGNALVATVFLGRERALKFLLEQKGEGTARTTYASTPRDGRGHTPLLSAVTTGPCS-----PRVVRLLVDAGADATLAVRVPDGFGR-STKYTPLDCATRCLAEKVVDEDFATAQQLRNLRASRRLLLQVEVVHATSWLWGGHAGCPA--APGKKRAQTESTNGKPLKSRLPIMWRRSAR--RGAALPGVFRLA 425          
BLAST of mRNA_L-elsbetiae_contig6106.14659.1 vs. uniprot
Match: D7G1U9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1U9_ECTSI)

HSP 1 Score: 136 bits (343), Expect = 1.140e-30
Identity = 213/426 (50.00%), Postives = 254/426 (59.62%), Query Frame = 2
Query:  104 NRLHKAVRDGCTPRINALLSTRSNDIDERGPGGFTPLMIAVEEDLAHVIKILLTKGASVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVESVTALLRGNADPLLATTDSSSGIRFTPLEAAAAKGHSKTVLELIQHVGIEGCGGESGGGVERALDCAAHHQHVNVMAVLMGAGVVDTGSALRTALLNGREGSVKFLLQQQTEENIGPYVNNSGIDGFEMPLLFCIMSVVPHKVLIRASRTARLLVGAGANPSAAAPATNPGGIVSSHRTPITMVAFHLAQKKFDGKAIPEEQLHALEAIRRVMLQAEAIRALSWLW-PSDVPIDVHT-AEGTRGVMTTSTP-LTLMVPIMRRRAGRAARVVLLRALFRQA 1372
            N+LHKA   G   R++ALLST S DI++  P G+TPLM+A E+  + V K LL KGA+VS     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                     GHS+ V ELIQ +G+ GCGG S G VE +L  AA  Q+V++M +L   GVVDTG AL  A    RE SVKFLLQ Q       YVNN+ +D F    L C +          + R AR L+  GA+  +    T  G   +S  TP+      L Q K  GK   EEQL +L+AI R++ Q EA+ A+SWLW  SD PI     A  +R   TT+ P L  M  ++R   G+  R V+LRA++R A
Sbjct:   34 NQLHKAAYHGSADRVDALLSTGSVDINQGNPKGWTPLMLATEKGHSLVAKSLLEKGANVSVAGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------------------XXXXXLQKQHGHSEVVRELIQQLGVRGCGGVSAG-VE-SLRLAATEQYVDIMGILTVGGVVDTGRALVVAAEYSREESVKFLLQHQAGGGTW-YVNNT-LDPFGRTPLVCTIEACGSS----SPRIARFLIDDGADTKSTVLVTRSGEWTTSRDTPLGFATRSLRQNKVGGKNATEEQLRSLKAIHRLLSQIEAVHAVSWLWRSSDTPIGHAVGAASSRMKPTTAGPTLKRMSTVLRTTVGK--RGVVLRAVYRAA 426          
BLAST of mRNA_L-elsbetiae_contig6106.14659.1 vs. uniprot
Match: D7FVU0_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVU0_ECTSI)

HSP 1 Score: 133 bits (334), Expect = 6.840e-30
Identity = 87/221 (39.37%), Postives = 124/221 (56.11%), Query Frame = 2
Query:  596 SSSGIRFTPLEAAAAKGHSKTVLELIQHVGIEGCGGESGGGVERALDCAAHHQHVNVMAVLMGAGVVDTGSALRTALLNGREGSVKFLLQQQTEENIGPYVNNSGIDGFEMPLLFCIMSVVPHKVLIRASRTARLLVGAGANPSAAAPATNPGGIVSSHRTPITMVAFHLAQKKFD-GKAIPEEQLHALEAIRRVMLQAEAIRALSWLWPSDVPIDVHTAE 1255
            SSSG    PL+ AA+ GHS  V  L+Q +GI+GC  E+ G  ++AL  AA  + ++ +A+L GAG VDT  +   AL+   E S K  L+Q+ +E  G     S  D     L   + S+   + L +  R  RLL+ AGA+ ++    TN  G V  + TP+ +   +L +K  D G+   EE L  LEAIRR++L+AEA+ A+SWLWPSD     H AE
Sbjct:  164 SSSGFPGVPLDVAASSGHSGVVRHLVQELGIKGCNPENAG--KQALLLAASKRDLDTLAILTGAGAVDTSGS---ALMCAAEASFKHFLRQRLKEEKGGVEYASINDRISSGLTALVFSI--QRCLSQTPRIVRLLINAGADTTSVIRGTNSEGEVQCNGTPLALTTSYLWEKILDNGEPATEEHLQRLEAIRRLLLRAEAVHAVSWLWPSDASFVGHAAE 377          
BLAST of mRNA_L-elsbetiae_contig6106.14659.1 vs. uniprot
Match: D8LSC5_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSC5_ECTSI)

HSP 1 Score: 124 bits (311), Expect = 2.840e-28
Identity = 82/196 (41.84%), Postives = 114/196 (58.16%), Query Frame = 2
Query:  749 HQHVNVMAVLMGAGVVDT-GSALRTALLNGREGSVKFLLQQQTEEN---IGPYVNNSGIDGFEMPLLFCIMSVVPHKVLIRASRTARLLVGAGANPSAAAPATNPGGIVSSHRTPITMVAFHLAQKKFDGKAIPEEQLHALEAIRRVMLQAEAIRALSWLWPSDVPIDVHTAEGTRGVMTTSTPLTLMVPIMRRRA 1324
            +QH+++MA+L GAGV D  G  L      GRE SV+FLL+Q+ +E+   +  Y N+S  DG  M  L C +            R  RLLV AGA+ ++    TN  G V  + TP+ +    L +K  DGK   EEQLH L+AIRR++L+ +A+ A+SWLWPSD P  VH  E + G      PL+L +PI++RRA
Sbjct:    2 NQHMDIMAILTGAGVRDAMGYVLLGTAGLGREASVQFLLRQRRKESEMSVHAYANSS--DGSGMTPLSCSIEWCSSGN----PRIVRLLVDAGADTTSTVRVTNLNGGVEYNDTPLAVTTSLLREKVVDGKPATEEQLHRLQAIRRLLLRVDAVHAVSWLWPSDAPSIVHAVERSCGPEPRRPPLSLTLPILKRRA 191          
BLAST of mRNA_L-elsbetiae_contig6106.14659.1 vs. uniprot
Match: A0A6H5KEI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEI1_9PHAE)

HSP 1 Score: 127 bits (318), Expect = 3.580e-28
Identity = 103/278 (37.05%), Postives = 141/278 (50.72%), Query Frame = 2
Query:  542 SVTALLRGNADPLLATTDSSSGIRFTPLEAAAAKGHSKTVLELIQHVGIEGCGGESGGGVERALDCAAHHQHVNVMAVLMGAGVVD-TGSALRTALLNGREGSVKFLLQQQTEENIGPYVNNSGIDGFEMPLLFCIMSVVPHKVLIRASRTARLLVGAGANPSAAAPATNPGGIVSSHRTPITMVAFHLAQKKFDGKAIPEEQLHALEAIRRVMLQAEAIRALSWLWPSDVPIDVHTAEGTRGVMTTSTPLTLMVPIMRRRAGRAARVVLLRALFRQA 1372
            +V  LL   A+PLL  +   SG  F PLE AA  G S  V EL++  GI  CGG SG  ++ AL  AA +  V++M+++MGAGVVD  G AL  A+ +G+E +V FLL+QQ E     YVN +  D     LL+   S   +       R  R LV AGA+ +                   + V     + +      P E ++  EA RRV+LQA A+ A+SW+WPSD P+    A   R    + TPL+ M+ ++RRRA    R  L   LFR A
Sbjct:   27 AVKVLLHAKANPLLTRSSECSGRSFVPLEVAAQTGRSAVVRELLREFGIRCCGGPSGRLLD-ALRVAAVYGQVDIMSIIMGAGVVDPVGLALLAAVGSGKEAAVGFLLRQQQERWQTSYVNTACDDDGLTALLW---SFGGNNNKPCNPRITRRLVDAGADTT-------------------STVQLRAERSRTRVNMTPLEYVN--EATRRVLLQAVAVHAVSWMWPSDDPVLARPANSPRTTKHSPTPLSTMLTVLRRRA--RTRASLWDTLFRWA 277          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6106.14659.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KJA9_9PHAE1.460e-3842.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FT11_ECTSI3.980e-3835.06EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D8LJF9_ECTSI4.810e-3444.93EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6H5KQV0_9PHAE1.070e-3340.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FVU3_ECTSI1.740e-3239.85EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D8LL76_ECTSI4.720e-3249.53EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D7G1U9_ECTSI1.140e-3050.00EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D7FVU0_ECTSI6.840e-3039.37EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D8LSC5_ECTSI2.840e-2841.84EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6H5KEI1_9PHAE3.580e-2837.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6106contigL-elsbetiae_contig6106:7680..10677 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score167.2
Seed ortholog evalue1.8e-38
Seed eggNOG ortholog2880.D7FT11
Hectar predicted targeting categoryother localisation
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG4177@2759
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons2
Model size2562
Cds size1341
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6106.14659.1prot_L-elsbetiae_contig6106.14659.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig6106 8813..10589 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816668.0668898-UTR-L-elsbetiae_contig6106:7679..88121622816668.0668898-UTR-L-elsbetiae_contig6106:7679..8812Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6106 7680..8812 -
1691683726.0853066-UTR-L-elsbetiae_contig6106:7679..88121691683726.0853066-UTR-L-elsbetiae_contig6106:7679..8812Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6106 7680..8812 -
1622816668.1024253-UTR-L-elsbetiae_contig6106:10589..106771622816668.1024253-UTR-L-elsbetiae_contig6106:10589..10677Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6106 10590..10677 -
1691683726.1180813-UTR-L-elsbetiae_contig6106:10589..106771691683726.1180813-UTR-L-elsbetiae_contig6106:10589..10677Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6106 10590..10677 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816668.0783136-CDS-L-elsbetiae_contig6106:8812..88761622816668.0783136-CDS-L-elsbetiae_contig6106:8812..8876Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6106 8813..8876 -
1691683726.098315-CDS-L-elsbetiae_contig6106:8812..88761691683726.098315-CDS-L-elsbetiae_contig6106:8812..8876Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6106 8813..8876 -
1622816668.0894754-CDS-L-elsbetiae_contig6106:9312..105891622816668.0894754-CDS-L-elsbetiae_contig6106:9312..10589Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6106 9313..10589 -
1691683726.1075838-CDS-L-elsbetiae_contig6106:9312..105891691683726.1075838-CDS-L-elsbetiae_contig6106:9312..10589Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6106 9313..10589 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig6106.14659.1

>prot_L-elsbetiae_contig6106.14659.1 ID=prot_L-elsbetiae_contig6106.14659.1|Name=mRNA_L-elsbetiae_contig6106.14659.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=447bp
MALRWNRLHKAVRDGCTPRINALLSTRSNDIDERGPGGFTPLMIAVEEDL
AHVIKILLTKGASVSVLNDGGFSALAHAAARGRFAATKLLLEAEADVEAI
TEEGGTPLHHAIARGNPHVAKLLIEAGANVDARQPSGQTPLYLACSAGDV
ESVTALLRGNADPLLATTDSSSGIRFTPLEAAAAKGHSKTVLELIQHVGI
EGCGGESGGGVERALDCAAHHQHVNVMAVLMGAGVVDTGSALRTALLNGR
EGSVKFLLQQQTEENIGPYVNNSGIDGFEMPLLFCIMSVVPHKVLIRASR
TARLLVGAGANPSAAAPATNPGGIVSSHRTPITMVAFHLAQKKFDGKAIP
EEQLHALEAIRRVMLQAEAIRALSWLWPSDVPIDVHTAEGTRGVMTTSTP
LTLMVPIMRRRAGRAARVVLLRALFRQAGRPGWLGGIPQHLLPGRS*
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mRNA from alignment at L-elsbetiae_contig6106:7680..10677-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig6106.14659.1 ID=mRNA_L-elsbetiae_contig6106.14659.1|Name=mRNA_L-elsbetiae_contig6106.14659.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2998bp|location=Sequence derived from alignment at L-elsbetiae_contig6106:7680..10677- (Laminarionema elsbetiae ELsaHSoW15)
GTTTTCTTCGTCCTCTCCACTGCTATCTTGGCTATCTGGAACACATGGAC ACACAGCCACCTAGCTCCTCGGCAGTAACGACAGACGCATGGCGCTCCGT TGGAATCGGCTGCACAAGGCCGTTCGGGACGGATGCACCCCGAGAATAAA TGCCCTGTTATCGACCAGGTCGAACGACATCGACGAACGCGGCCCAGGTG GCTTCACTCCTCTTATGATAGCCGTCGAAGAAGACCTTGCTCACGTTATC AAGATCCTCCTAACCAAGGGAGCCAGCGTCTCCGTTTTGAACGATGGAGG TTTTTCAGCCCTGGCTCACGCCGCCGCCAGGGGACGCTTTGCCGCTACGA AGCTGTTGCTGGAGGCCGAGGCGGACGTGGAGGCAATAACCGAGGAAGGT GGCACTCCGTTACACCATGCCATTGCACGTGGGAACCCGCATGTGGCGAA ATTATTGATCGAAGCAGGTGCAAATGTCGATGCGCGTCAGCCGTCGGGCC AGACACCGCTGTACCTTGCTTGTTCAGCGGGAGACGTCGAATCGGTGACG GCGCTTCTTCGCGGCAACGCTGATCCGTTGCTCGCTACAACGGACAGTTC CTCGGGGATTAGGTTCACCCCACTGGAGGCGGCAGCGGCAAAAGGGCACT CGAAGACGGTGCTCGAGCTGATCCAGCATGTTGGGATCGAAGGATGCGGC GGTGAAAGCGGTGGTGGTGTGGAAAGAGCTCTCGACTGCGCGGCGCATCA TCAGCACGTCAACGTCATGGCGGTGTTGATGGGTGCCGGAGTGGTTGACA CGGGCTCAGCACTCAGAACCGCCCTCCTTAATGGCAGGGAGGGTTCTGTC AAGTTCCTCCTCCAGCAGCAGACAGAGGAAAATATTGGACCCTACGTGAA CAATAGCGGAATCGACGGATTCGAGATGCCGCTGCTCTTCTGTATTATGA GCGTAGTACCACACAAGGTGCTAATAAGGGCGTCCAGGACAGCGCGGCTG CTCGTCGGTGCTGGCGCGAATCCGTCAGCAGCAGCCCCGGCCACGAACCC CGGGGGAATAGTGTCATCCCACAGGACGCCCATAACTATGGTGGCTTTTC ATCTAGCGCAGAAGAAATTCGACGGAAAAGCCATACCAGAGGAGCAGCTA CACGCGCTAGAGGCTATCCGCCGCGTGATGTTGCAAGCAGAGGCCATTCG TGCGTTATCTTGGTTGTGGCCCAGTGATGTCCCCATCGATGTCCATACTG CCGAGGGTACACGGGGGGTGATGACGACATCGACTCCGCTGACGTTGATG GTGCCGATCATGAGGCGACGGGCGGGGCGGGCAGCCCGTGTGGTGCTCTT GAGGGCCCTGTTCAGGTGGGCTTTTTACCTATCTATCAGGCTGTGCTGTG ACTCGCGTGTGTTGTGACTCGCGATGCTGTGGAGCTTGCATGAACATCCG CTGCCTGTCCCTAACGCTGCTCCTGCCCCTGCCTGTGCGTTATGTTTTGT TTCTTCGTAGTCTAGACGTGACGGCACTTTGATGCCTTGGCGGCCGGTGT CGTTCAGGTAGTGTCGTGCTTTATACCAGCATGTTGTTTGATTGCATTGC TGGTTAGTTGCGGGATTGTTGTTGGAGGTTGGGCAACAGCGGTACTGATC TCCAGCCCAGCCTTCTTTCTCATCGACAACCACGTTGAATTCTGCGATAG CTTGCCCTCCCTCCCCCATCTCGCTGCGACCGATAACCCACCGGCCGTTT CCTGGCGTGCTTGGTTCCCTCCCGCGTGGTTTCATCCGCTTATATGCGCA GGCAAGCTGGTCGCCCGGGTTGGCTAGGTGGTATCCCCCAACACCTTCTA CCAGGCAGGTCGTGAGTTCGAAACTCGGCGGGAGCAACTTTTTCTTTTTC TTGCGAAGTAATTTTTTCTCTCGCCTCCGTCCCTGTCAGTGGATAGCGCT TAGCGTGTGTACACAAACTCCGACCTCACCGTCGACGAGGGGAAGGGACG GCTGAACCCTTCTCGCTACAAAAATCTTAGGCAAGCACCGCCGACGGGGG GGATGGGGGCCTTGGGGAAAGGAAACCTTCTGTGTGACCACGGTTCAGTA CTCTGGCAAGATGTCCTCGTGACAAGGAATCCATCCAGCACTGGCATTAA AAGTGAACAAAAAAAAAGTAAAAATCGCCAAGTCCTGGCCCTAAGGAGGT GGATATTGGCGTACTCGCCGCAGACGATGTGCTTTGTGGTTGATGTTGTT GTTGGTTGTTTCAAGGCTTCACCGCGTTCTTCCAAGTCAAATCACAACAG AAATCGGTATGGCTTTGGTTCAAGACTAAGTGCCGGCGTTTTTGTTGAAA TTAACTCCGGACCTCCAGTACTGACTTCCAGCAAGCTGAAGCACTTTTCT TGTTCGACGACAGCCATGGTTGGGGCGGCAGCTTGGAGTTGCGTGTACAT GGCAAATTGCTGTGCCAAAGAGGATCGTCTCGAAGTGTTGCTTTAATTGT ATGATTGAGTAAACATAACAGATATTATTGTAGACTACATGTGAGGCGTT TTTTGGCACAAAACAGGATGCTGGGCACATTTTCTTCCATTTGGCAAGTC TTGTTTTGTTTCCAAGAGGGCTCTGTATGGAGTAGTAGACGATGCTCGAG GCAGGTTGGAAGCCTAGTCCCGCGCTGTCTGTTGCTTCGACGCACTTGCC CGTAATATTGTTGAGATGGCATTTGTTGAGCCGAGGCGCCGTTGGGGGAA GAGACAAAAGAGACGACTTTTACGCACTGCTGTGGTGGGTGGTAGTACAA GATAATGTGACAGGGCACGGGCGGGTTGGAGGTTCCGTGCTTTGTGGGTG TTTGGGGAGTCATCGAGGTGGTTGATTCGATTTCCCTTCGAAGGGGGTGG AGCACTGGAGGTATGGTCCGTCCACGACATTTTGTCCATTAACTTTTTTT CGTGATAACGTGGGTTTTGGACGAAATGTTGAGTCTCCTCAACCAGGG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig6106:7680..10677-

>mRNA_L-elsbetiae_contig6106.14659.1 ID=mRNA_L-elsbetiae_contig6106.14659.1|Name=mRNA_L-elsbetiae_contig6106.14659.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2682bp|location=Sequence derived from alignment at L-elsbetiae_contig6106:7680..10677- (Laminarionema elsbetiae ELsaHSoW15)
ATGGCGCTCCGTTGGAATCGGCTGCACAAGGCCGTTCGGGACGGATGCAC
CCCGAGAATAAATGCCCTGTTATCGACCAGGTCGAACGACATCGACGAAC
GCGGCCCAGGTGGCTTCACTCCTCTTATGATAGCCGTCGAAGAAGACCTT
GCTCACGTTATCAAGATCCTCCTAACCAAGGGAGCCAGCGTCTCCGTTTT
GAACGATGGAGGTTTTTCAGCCCTGGCTCACGCCGCCGCCAGGGGACGCT
TTGCCGCTACGAAGCTGTTGCTGGAGGCCGAGGCGGACGTGGAGGCAATA
ACCGAGGAAGGTGGCACTCCGTTACACCATGCCATTGCACGTGGGAACCC
GCATGTGGCGAAATTATTGATCGAAGCAGGTGCAAATGTCGATGCGCGTC
AGCCGTCGGGCCAGACACCGCTGTACCTTGCTTGTTCAGCGGGAGACGTC
GAATCGGTGACGGCGCTTCTTCGCGGCAACGCTGATCCGTTGCTCGCTAC
AACGGACAGTTCCTCGGGGATTAGGTTCACCCCACTGGAGGCGGCAGCGG
CAAAAGGGCACTCGAAGACGGTGCTCGAGCTGATCCAGCATGTTGGGATC
GAAGGATGCGGCGGTGAAAGCGGTGGTGGTGTGGAAAGAGCTCTCGACTG
CGCGGCGCATCATCAGCACGTCAACGTCATGGCGGTGTTGATGGGTGCCG
GAGTGGTTGACACGGGCTCAGCACTCAGAACCGCCCTCCTTAATGGCAGG
GAGGGTTCTGTCAAGTTCCTCCTCCAGCAGCAGACAGAGGAAAATATTGG
ACCCTACGTGAACAATAGCGGAATCGACGGATTCGAGATGCCGCTGCTCT
TCTGTATTATGAGCGTAGTACCACACAAGGTGCTAATAAGGGCGTCCAGG
ACAGCGCGGCTGCTCGTCGGTGCTGGCGCGAATCCGTCAGCAGCAGCCCC
GGCCACGAACCCCGGGGGAATAGTGTCATCCCACAGGACGCCCATAACTA
TGGTGGCTTTTCATCTAGCGCAGAAGAAATTCGACGGAAAAGCCATACCA
GAGGAGCAGCTACACGCGCTAGAGGCTATCCGCCGCGTGATGTTGCAAGC
AGAGGCCATTCGTGCGTTATCTTGGTTGTGGCCCAGTGATGTCCCCATCG
ATGTCCATACTGCCGAGGGTACACGGGGGGTGATGACGACATCGACTCCG
CTGACGTTGATGGTGCCGATCATGAGGCGACGGGCGGGGCGGGCAGCCCG
TGTGGTGCTCTTGAGGGCCCTGTTCAGATGGCGCTCCGTTGGAATCGGCT
GCACAAGGCCGTTCGGGACGGATGCACCCCGAGAATAAATGCCCTGTTAT
CGACCAGGTCGAACGACATCGACGAACGCGGCCCAGGTGGCTTCACTCCT
CTTATGATAGCCGTCGAAGAAGACCTTGCTCACGTTATCAAGATCCTCCT
AACCAAGGGAGCCAGCGTCTCCGTTTTGAACGATGGAGGTTTTTCAGCCC
TGGCTCACGCCGCCGCCAGGGGACGCTTTGCCGCTACGAAGCTGTTGCTG
GAGGCCGAGGCGGACGTGGAGGCAATAACCGAGGAAGGTGGCACTCCGTT
ACACCATGCCATTGCACGTGGGAACCCGCATGTGGCGAAATTATTGATCG
AAGCAGGTGCAAATGTCGATGCGCGTCAGCCGTCGGGCCAGACACCGCTG
TACCTTGCTTGTTCAGCGGGAGACGTCGAATCGGTGACGGCGCTTCTTCG
CGGCAACGCTGATCCGTTGCTCGCTACAACGGACAGTTCCTCGGGGATTA
GGTTCACCCCACTGGAGGCGGCAGCGGCAAAAGGGCACTCGAAGACGGTG
CTCGAGCTGATCCAGCATGTTGGGATCGAAGGATGCGGCGGTGAAAGCGG
TGGTGGTGTGGAAAGAGCTCTCGACTGCGCGGCGCATCATCAGCACGTCA
ACGTCATGGCGGTGTTGATGGGTGCCGGAGTGGTTGACACGGGCTCAGCA
CTCAGAACCGCCCTCCTTAATGGCAGGGAGGGTTCTGTCAAGTTCCTCCT
CCAGCAGCAGACAGAGGAAAATATTGGACCCTACGTGAACAATAGCGGAA
TCGACGGATTCGAGATGCCGCTGCTCTTCTGTATTATGAGCGTAGTACCA
CACAAGGTGCTAATAAGGGCGTCCAGGACAGCGCGGCTGCTCGTCGGTGC
TGGCGCGAATCCGTCAGCAGCAGCCCCGGCCACGAACCCCGGGGGAATAG
TGTCATCCCACAGGACGCCCATAACTATGGTGGCTTTTCATCTAGCGCAG
AAGAAATTCGACGGAAAAGCCATACCAGAGGAGCAGCTACACGCGCTAGA
GGCTATCCGCCGCGTGATGTTGCAAGCAGAGGCCATTCGTGCGTTATCTT
GGTTGTGGCCCAGTGATGTCCCCATCGATGTCCATACTGCCGAGGGTACA
CGGGGGGTGATGACGACATCGACTCCGCTGACGTTGATGGTGCCGATCAT
GAGGCGACGGGCGGGGCGGGCAGCCCGTGTGGTGCTCTTGAGGGCCCTGT
TCAGGCAAGCTGGTCGCCCGGGTTGGCTAGGTGGTATCCCCCAACACCTT
CTACCAGGCAGGTCGTGAGCAAGCTGGTCGCCCGGGTTGGCTAGGTGGTA
TCCCCCAACACCTTCTACCAGGCAGGTCGTGA
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