mRNA_L-elsbetiae_contig6101.14649.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig6101.14649.1
Unique NamemRNA_L-elsbetiae_contig6101.14649.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6101.14649.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6101contigL-elsbetiae_contig6101:8361..10265 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons2
Model size1117
Cds size1113
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816667.4626422-CDS-L-elsbetiae_contig6101:8362..87011622816667.4626422-CDS-L-elsbetiae_contig6101:8362..8701Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6101 8363..8701 -
1691683725.6803403-CDS-L-elsbetiae_contig6101:8362..87011691683725.6803403-CDS-L-elsbetiae_contig6101:8362..8701Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6101 8363..8701 -
1622816667.4740748-CDS-L-elsbetiae_contig6101:9491..102651622816667.4740748-CDS-L-elsbetiae_contig6101:9491..10265Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6101 9492..10265 -
1691683725.6893098-CDS-L-elsbetiae_contig6101:9491..102651691683725.6893098-CDS-L-elsbetiae_contig6101:9491..10265Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6101 9492..10265 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6101.14649.1prot_L-elsbetiae_contig6101.14649.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig6101 8363..10265 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig6101.14649.1

>prot_L-elsbetiae_contig6101.14649.1 ID=prot_L-elsbetiae_contig6101.14649.1|Name=mRNA_L-elsbetiae_contig6101.14649.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=371bp
DLHAESDTGTPTEAPRQANGREKKQYPDQERAGDTHTGEEEKDDRVVGLE
VGRQVSVGAERLSKAFRPSDSSPAAPFAGDGGAHQPPPPYTGRQQPRKQL
DDQSDEGNGGVGAHRVLPTTVPLRDGSPLLLPSEIAVARAALSARTSTQP
PSEKAAVVSDPGAGGIPSVAASASGSLGVRNRVEGERTVESSLFHGLFRD
QGLETSSSPGDDTSSSGDSGGGESACNGGGGGCVQRLRQRVTTRGHEQYH
NATACTSPAYAFELQTEVDFWVSGARREGVLRRHTPVDGGTVHTVADDSM
PTSIGSSSESPQEKLHAPPRRRRRRVFPPESEGDAVDRLLRATLSGDEGT
KDALGLLVFERHTAKERSTEA
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mRNA from alignment at L-elsbetiae_contig6101:8361..10265-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig6101.14649.1 ID=mRNA_L-elsbetiae_contig6101.14649.1|Name=mRNA_L-elsbetiae_contig6101.14649.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1905bp|location=Sequence derived from alignment at L-elsbetiae_contig6101:8361..10265- (Laminarionema elsbetiae ELsaHSoW15)
GACCTTCATGCGGAAAGCGATACTGGAACCCCTACGGAAGCGCCAAGACA
AGCAAACGGGCGTGAGAAGAAGCAGTACCCGGACCAGGAGCGCGCGGGGG
ATACCCATACCGGAGAAGAGGAGAAGGATGACAGGGTTGTTGGCTTAGAA
GTTGGCCGCCAGGTCAGCGTCGGCGCTGAGAGGCTCTCAAAAGCTTTTCG
GCCTTCAGACTCCAGCCCGGCGGCCCCTTTCGCCGGTGACGGTGGGGCGC
ACCAGCCACCCCCGCCTTACACGGGCCGACAGCAGCCCCGAAAGCAGCTA
GACGACCAGTCTGATGAGGGTAACGGTGGTGTGGGTGCTCATCGAGTTTT
GCCAACCACGGTGCCGCTACGCGATGGTAGTCCCCTGCTACTACCGTCAG
AGATAGCGGTAGCACGTGCCGCGCTCTCTGCTCGTACATCAACCCAGCCT
CCTTCAGAGAAAGCTGCTGTGGTGAGCGACCCAGGAGCCGGGGGTATACC
GTCGGTGGCGGCATCTGCATCCGGTTCTTTGGGGGTGCGAAACCGGGTGG
AAGGCGAACGGACCGTGGAGTCCTCTTTGTTTCACGGGTTGTTCCGAGAT
CAAGGCCTCGAAACAAGCAGTAGCCCGGGTGACGATACTAGCAGCAGCGG
TGACAGCGGCGGTGGCGAGAGCGCTTGCAATGGCGGCGGCGGCGGGTGCG
TGCAACGCCTTCGCCAACGCGTTACGACCAGGGGGCACGAGCAGTACCAC
AACGCAACGGCTTGCACGTCCCCTGTGAGTGGAGCTTTGCCGGAGTAATC
GAGATCGTTCAACGTTCTGCGGTATCCGAAGCCCACGTTGTTTCCGTTGA
GAATCGCCAATTTTTTACATCTAGGCGCACTCGAGTGTATGGTACAAAAG
TACGCGCGCTATTGCGCCTTCTACGCCCTGGTGTGGGTAGGCAGCGCGTG
GTTTGGTGGTGGATGTGTGCGGGCGCCCACGAGAATACCCCGCTGACCGG
CAAGTTTATTTGCCACGCATCTCGGCGCAGCACAGGCTGCTTGTCGTTGA
GAAGGAACATGATCACTAAAACCTGGTTGTAGATGCAACACTCTAGCTTT
TCTGAACTCGCAACGGCCTTGGCCCTCTTGATGGACAACGTGTTCTTCTG
TACTGTAGCCGGCTCATCCTCTAAGGGTCACCCACTTTCCACCTGCAAAC
TTTTCTCCTCCTGTGTCTTGTCTCGTTGGGGTTCCGTAAAATATGCCGTA
ATCCGCATTAAGCCCCCCCGGAGTTTTGAGTCCCCCCCCCATCACCTTTC
GGCCTGGAAGCATGATTTATCTGAGTCTTTCCTGGGGGGGGTTGTTTTTT
TCACGAAAAGCAAAAGACCCCCTCCCCGGGGGGGGGGGCTACCTTAGAGC
GGGTTACGGAATTACTACGCGGTTTTTCCCGAACGCGTAAAAACCAATTT
TGAAAAGGAGGCGAGAAAAGCCAACTCCGGTTGTAGCGGACCCGTTCAAC
GCCGCTTTCCCCGCTCTCTCCCTTGCCAAACTCGCATACGTCCCACCCCA
TTGTTTTCATGCAGGCGTACGCATTTGAACTCCAAACAGAGGTGGACTTT
TGGGTCTCCGGCGCCCGCAGGGAAGGAGTGTTGCGAAGGCACACCCCGGT
CGACGGCGGCACGGTCCATACCGTGGCTGACGACAGCATGCCCACCAGCA
TTGGTAGTAGTAGCGAATCGCCCCAAGAAAAGTTACATGCGCCGCCCCGG
CGTCGTCGCAGACGGGTTTTTCCGCCAGAAAGTGAGGGTGATGCGGTGGA
CAGACTGCTCAGAGCCACCTTAAGTGGCGACGAGGGTACAAAAGATGCTT
TGGGACTGCTAGTGTTCGAGCGACACACGGCCAAAGAGAGAAGTACAGAG
GCGGC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig6101:8361..10265-

>mRNA_L-elsbetiae_contig6101.14649.1 ID=mRNA_L-elsbetiae_contig6101.14649.1|Name=mRNA_L-elsbetiae_contig6101.14649.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2226bp|location=Sequence derived from alignment at L-elsbetiae_contig6101:8361..10265- (Laminarionema elsbetiae ELsaHSoW15)
GACCTTCATGCGGAAAGCGATACTGGAACCCCTACGGAAGCGCCAAGACA
AGCAAACGGGCGTGAGAAGAAGCAGTACCCGGACCAGGAGCGCGCGGGGG
ATACCCATACCGGAGAAGAGGAGAAGGATGACAGGGTTGTTGGCTTAGAA
GTTGGCCGCCAGGTCAGCGTCGGCGCTGAGAGGCTCTCAAAAGCTTTTCG
GCCTTCAGACTCCAGCCCGGCGGCCCCTTTCGCCGGTGACGGTGGGGCGC
ACCAGCCACCCCCGCCTTACACGGGCCGACAGCAGCCCCGAAAGCAGCTA
GACGACCAGTCTGATGAGGGTAACGGTGGTGTGGGTGCTCATCGAGTTTT
GCCAACCACGGTGCCGCTACGCGATGGTAGTCCCCTGCTACTACCGTCAG
AGATAGCGGTAGCACGTGCCGCGCTCTCTGCTCGTACATCAACCCAGCCT
CCTTCAGAGAAAGCTGCTGTGGTGAGCGACCCAGGAGCCGGGGGTATACC
GTCGGTGGCGGCATCTGCATCCGGTTCTTTGGGGGTGCGAAACCGGGTGG
AAGGCGAACGGACCGTGGAGTCCTCTTTGTTTCACGGGTTGTTCCGAGAT
CAAGGCCTCGAAACAAGCAGTAGCCCGGGTGACGATACTAGCAGCAGCGG
TGACAGCGGCGGTGGCGAGAGCGCTTGCAATGGCGGCGGCGGCGGGTGCG
TGCAACGCCTTCGCCAACGCGTTACGACCAGGGGGCACGAGCAGTACCAC
AACGCAACGGCTTGCACGTCCCCTGACCTTCATGCGGAAAGCGATACTGG
AACCCCTACGGAAGCGCCAAGACAAGCAAACGGGCGTGAGAAGAAGCAGT
ACCCGGACCAGGAGCGCGCGGGGGATACCCATACCGGAGAAGAGGAGAAG
GATGACAGGGTTGTTGGCTTAGAAGTTGGCCGCCAGGTCAGCGTCGGCGC
TGAGAGGCTCTCAAAAGCTTTTCGGCCTTCAGACTCCAGCCCGGCGGCCC
CTTTCGCCGGTGACGGTGGGGCGCACCAGCCACCCCCGCCTTACACGGGC
CGACAGCAGCCCCGAAAGCAGCTAGACGACCAGTCTGATGAGGGTAACGG
TGGTGTGGGTGCTCATCGAGTTTTGCCAACCACGGTGCCGCTACGCGATG
GTAGTCCCCTGCTACTACCGTCAGAGATAGCGGTAGCACGTGCCGCGCTC
TCTGCTCGTACATCAACCCAGCCTCCTTCAGAGAAAGCTGCTGTGGTGAG
CGACCCAGGAGCCGGGGGTATACCGTCGGTGGCGGCATCTGCATCCGGTT
CTTTGGGGGTGCGAAACCGGGTGGAAGGCGAACGGACCGTGGAGTCCTCT
TTGTTTCACGGGTTGTTCCGAGATCAAGGCCTCGAAACAAGCAGTAGCCC
GGGTGACGATACTAGCAGCAGCGGTGACAGCGGCGGTGGCGAGAGCGCTT
GCAATGGCGGCGGCGGCGGGTGCGTGCAACGCCTTCGCCAACGCGTTACG
ACCAGGGGGCACGAGCAGTACCACAACGCAACGGCTTGCACGTCCCCTGC
GTACGCATTTGAACTCCAAACAGAGGTGGACTTTTGGGTCTCCGGCGCCC
GCAGGGAAGGAGTGTTGCGAAGGCACACCCCGGTCGACGGCGGCACGGTC
CATACCGTGGCTGACGACAGCATGCCCACCAGCATTGGTAGTAGTAGCGA
ATCGCCCCAAGAAAAGTTACATGCGCCGCCCCGGCGTCGTCGCAGACGGG
TTTTTCCGCCAGAAAGTGAGGGTGATGCGGTGGACAGACTGCTCAGAGCC
ACCTTAAGTGGCGACGAGGGTACAAAAGATGCTTTGGGACTGCTAGTGTT
CGAGCGACACACGGCCAAAGAGAGAAGTACAGAGGCGGCGTACGCATTTG
AACTCCAAACAGAGGTGGACTTTTGGGTCTCCGGCGCCCGCAGGGAAGGA
GTGTTGCGAAGGCACACCCCGGTCGACGGCGGCACGGTCCATACCGTGGC
TGACGACAGCATGCCCACCAGCATTGGTAGTAGTAGCGAATCGCCCCAAG
AAAAGTTACATGCGCCGCCCCGGCGTCGTCGCAGACGGGTTTTTCCGCCA
GAAAGTGAGGGTGATGCGGTGGACAGACTGCTCAGAGCCACCTTAAGTGG
CGACGAGGGTACAAAAGATGCTTTGGGACTGCTAGTGTTCGAGCGACACA
CGGCCAAAGAGAGAAGTACAGAGGCG
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