mRNA_L-elsbetiae_contig6070.14611.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6070.14611.1 vs. uniprot
Match: A0A6H5JRW1_9PHAE (DUSP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRW1_9PHAE) HSP 1 Score: 265 bits (678), Expect = 1.870e-80 Identity = 124/155 (80.00%), Postives = 135/155 (87.10%), Query Frame = 1 Query: 1 RRPNRLDVNTHVGEFWFIIDAAWMSRWVGFVMGGADPPGPISNNNLFLHYSGKRRESMLVNQAASSRGGVMASRPDLRLKDGLQKARDYRAVHPLVWYLFREIYAADDAPEICRWKADIYQAEVQATRKFKFCEDTHTTAVYELRRFCAKIKADL 465 RR LDVNTHVGEFWFIIDA WMS WV FVMG + PPGPISN+NLF HYSG RRESMLV+ AASS GVMASRPDL+LKDGL+K +DYRAVHPLVWYLFREIY+ADDAPE+CRWKA+IYQAEVQ TRK K CE+ HT AVYELRRFCAKIK D+ Sbjct: 152 RRRQLLDVNTHVGEFWFIIDAIWMSTWVNFVMGKSGPPGPISNHNLFTHYSGNRRESMLVHHAASSARGVMASRPDLKLKDGLRKLKDYRAVHPLVWYLFREIYSADDAPELCRWKAEIYQAEVQITRKLKCCEEAHTKAVYELRRFCAKIKEDM 306
BLAST of mRNA_L-elsbetiae_contig6070.14611.1 vs. uniprot
Match: D8LDU8_ECTSI (DUSP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDU8_ECTSI) HSP 1 Score: 256 bits (654), Expect = 2.030e-76 Identity = 120/155 (77.42%), Postives = 133/155 (85.81%), Query Frame = 1 Query: 1 RRPNRLDVNTHVGEFWFIIDAAWMSRWVGFVMGGADPPGPISNNNLFLHYSGKRRESMLVNQAASSRGGVMASRPDLRLKDGLQKARDYRAVHPLVWYLFREIYAADDAPEICRWKADIYQAEVQATRKFKFCEDTHTTAVYELRRFCAKIKADL 465 +R +RLDVNTHVGEFWFIIDA WMS WV FVMG + PPGPISN+NLF HY+G RRESMLV+ AASS GVMASRPDL+LK+GL+K +DYRAVHPLVWYLFREIY+ADDAPE+CRWKADIY AEVQ TRK K CE HT AVYELRRF KIK D+ Sbjct: 186 KRFDRLDVNTHVGEFWFIIDAIWMSTWVNFVMGKSGPPGPISNHNLFTHYTGNRRESMLVHHAASSARGVMASRPDLKLKEGLRKLKDYRAVHPLVWYLFREIYSADDAPELCRWKADIYLAEVQITRKLKCCEGAHTKAVYELRRFSTKIKEDM 340
BLAST of mRNA_L-elsbetiae_contig6070.14611.1 vs. uniprot
Match: D7FUK6_ECTSI (DUSP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUK6_ECTSI) HSP 1 Score: 149 bits (375), Expect = 6.140e-35 Identity = 76/167 (45.51%), Postives = 98/167 (58.68%), Query Frame = 1 Query: 10 NRLDVNTHVGEFWFIIDAAWMSRWVGFVMGGADPPGPISNNNLFLHYSGKRRESMLVNQAASSRG---------------GVMASRPDL---RLKDGLQKARDYRAVHPLVWYLFREIYAADDAPEICRWKADIYQAEVQATRKFKFCEDTHTTAVYELRRFCAKIK 456 +RL +N +VGEFW +IDA W+SRWV FV+G A PPGPISN+ L+ RE AA++ G + P L + K LQ DYRA+HP+VWY+FREIY D P+ICRWK D+Y EV A R+ + E H A+Y+LRRF A+IK Sbjct: 296 DRLAINPNVGEFWMLIDAHWVSRWVAFVLGQAGPPGPISNDRLY-------REDAFAPTAAAAAAPQSVAYDVAFRREAPGPIRVGPTLSKTKFKADLQAISDYRAIHPVVWYIFREIYTTDGTPDICRWKLDLYAEEVSAMRRARILEPNHIKAIYQLRRFVARIK 455
BLAST of mRNA_L-elsbetiae_contig6070.14611.1 vs. uniprot
Match: A0A6H5K0W2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0W2_9PHAE) HSP 1 Score: 115 bits (288), Expect = 8.030e-26 Identity = 59/150 (39.33%), Postives = 87/150 (58.00%), Query Frame = 1 Query: 7 PNRLDVNTHVGEFWFIIDAAWMSRWVGFVMGGADPPGPISNNNLFLHYSGKRRESMLVNQAASSRGGVMASRPDLRLKDGLQKARDYRAVHPLVWYLFREIYAADDAPEICRWKADIYQAEVQATRKFKFCEDTHTTAVYELRRFCAKIK 456 P RL +N ++GEFW +IDA W+SR F P + + + + +R AA +RG + + + K+ LQ DYRA+HP+VWY+FREIY D P+ICRWK ++Y EV A R+ + + T A+++LRRF A+IK Sbjct: 9 PRRLAINPNIGEFWMLIDAHWVSRL--FREDALSPTAAAAPPSAGFNAAFRR--------AAPTRGVPLPAEMS-KFKEDLQAISDYRAIHPVVWYIFREIYTTDGTPDICRWKLEVYAEEVAAMRRTRILGPSQTKAIHQLRRFAARIK 147
BLAST of mRNA_L-elsbetiae_contig6070.14611.1 vs. uniprot
Match: D7FUK5_ECTSI (DUSP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUK5_ECTSI) HSP 1 Score: 80.9 bits (198), Expect = 2.760e-13 Identity = 42/95 (44.21%), Postives = 57/95 (60.00%), Query Frame = 1 Query: 10 NRLDVNTHVGEFWFIIDAAWMSRWVGFVMGGADPPGPISNNNLFLH--YSGKRRE---SMLVNQAASSRGGVMASRPDLRLKDGLQKARDYRAVH 279 +RL +N ++GEFW +IDA W+SRWV FV+G A PPGPISN LF +S R + + A +RG M + + K+ LQ DYRA+H Sbjct: 166 DRLAINPNIGEFWMLIDAHWVSRWVAFVLGQAGPPGPISNGRLFTEDAFSPMPRSGAYNAAFRRTAPTRGAPMPAEMS-KFKEDLQAISDYRAIH 259
BLAST of mRNA_L-elsbetiae_contig6070.14611.1 vs. uniprot
Match: A0A662Y400_9STRA (DUSP domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y400_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 2.170e-9 Identity = 40/106 (37.74%), Postives = 55/106 (51.89%), Query Frame = 1 Query: 40 EFWFIIDAAWMSRWVGFVMGGADPPGPISNNNLFLHYSGKRRESMLVNQAASSRGGVMASRPDLRLKDGLQKARDYRAVHPLVWYLFREIYAADDAPEICRWKADI 357 E WF+++ AWM+RWV FV G PGPISN+ L E+ L + V + GLQ A+DYR V PLVW L ++ + +AP + R+ DI Sbjct: 422 ECWFVVNTAWMNRWVLFVGKGGPEPGPISNDELLQ----PGWEAHLSDDTPGCADVV---------RSGLQLAKDYRCVAPLVWSLLVALHGSGEAPTLARYALDI 514
BLAST of mRNA_L-elsbetiae_contig6070.14611.1 vs. uniprot
Match: A0A662YFZ9_9STRA (DUSP domain-containing protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YFZ9_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 9.430e-9 Identity = 39/106 (36.79%), Postives = 54/106 (50.94%), Query Frame = 1 Query: 40 EFWFIIDAAWMSRWVGFVMGGADPPGPISNNNLFLHYSGKRRESMLVNQAASSRGGVMASRPDLRLKDGLQKARDYRAVHPLVWYLFREIYAADDAPEICRWKADI 357 E WF+++ AWM+RWV FV G PGPISN+ L + ++ R V+ S GLQ +DYR V PLVW L ++ + AP + R+ DI Sbjct: 468 ECWFVVNTAWMNRWVLFVGKGGPEPGPISNDELL-----QPGWETHLSDDTPGRADVVRS--------GLQLTKDYRCVAPLVWSLLVALHGSGKAPTLARYALDI 560
BLAST of mRNA_L-elsbetiae_contig6070.14611.1 vs. uniprot
Match: A0A6H5JRF3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRF3_9PHAE) HSP 1 Score: 68.2 bits (165), Expect = 1.150e-8 Identity = 28/47 (59.57%), Postives = 36/47 (76.60%), Query Frame = 1 Query: 1 RRPNRLDVNTHVGEFWFIIDAAWMSRWVGFVMGGADPPGPISNNNLF 141 ++ +RL +N HVGEFWF+IDA W++ WV FVMG A PG ISN NL+ Sbjct: 257 KKGDRLIINPHVGEFWFVIDAKWINSWVKFVMGQASAPGAISNLNLY 303 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6070.14611.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6070.14611.1 >prot_L-elsbetiae_contig6070.14611.1 ID=prot_L-elsbetiae_contig6070.14611.1|Name=mRNA_L-elsbetiae_contig6070.14611.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=135bp MSRWVGFVMGGADPPGPISNNNLFLHYSGKRRESMLVNQAASSRGGVMASback to top mRNA from alignment at L-elsbetiae_contig6070:207..3788+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6070.14611.1 ID=mRNA_L-elsbetiae_contig6070.14611.1|Name=mRNA_L-elsbetiae_contig6070.14611.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3582bp|location=Sequence derived from alignment at L-elsbetiae_contig6070:207..3788+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6070:207..3788+ >mRNA_L-elsbetiae_contig6070.14611.1 ID=mRNA_L-elsbetiae_contig6070.14611.1|Name=mRNA_L-elsbetiae_contig6070.14611.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=810bp|location=Sequence derived from alignment at L-elsbetiae_contig6070:207..3788+ (Laminarionema elsbetiae ELsaHSoW15)back to top |