mRNA_L-elsbetiae_contig6046.14586.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_L-elsbetiae_contig6046.14586.1
Unique Name	mRNA_L-elsbetiae_contig6046.14586.1
Type	mRNA
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)

Homology

[Close]

BLAST of mRNA_L-elsbetiae_contig6046.14586.1 vs. uniprot
Match: D7G544_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G544_ECTSI)

HSP 1 Score: 738 bits (1904), Expect = 8.240e-264
Identity = 364/504 (72.22%), Postives = 421/504 (83.53%), Query Frame = 1

Query:    1 VLRLSYLMHVQDTIMRGFTPFLLLLAAKVDFTAGHAVNVLQHGGGRRALSAVEEANDLDIFYRRLDPPPGDCCGMCTQLVLNPEIVVLLVAGAEANAGDLNPAVLEDGV--NIIIRMTIVYTDNIPGNPPNPPPLVFEVVVETQDWNNEPCSFLQEDCEVFKNNEILMFAPDARNGFATLTIDAVTAFTADSDVNIVSTTCDVRCQVAGECEGIDPSLEPSGTGIPFGMPRQSVFNNGFCDPSIFDDPHVHGLRGQRYDWFGEDGGWYAFLSTPDQLQMNLRVTSHLPVTFPERQLVTGVALVTDGGHTIMVEIVDPLDLSPTCQGTVDAGGSAPCLVNGGLRVTVDGREEVHGGAGEYRFDGDIQITAFNLPLECQRFGDYLMWGGLDEEQRLRSGSRGLRSAGAVSSIFEWLLADSVMIAPPWCVKYLDELHGDVSALAGVQSSHAVLRIESPNLSLRVNVGINTEQEQTLQDGRVVPTASFWQMDVRVEYAEGIAAAKGML 1506
            +LRLS+LM VQ T MRGFTPF+LLLA KVDF+ GHAVNVLQH G RRALSAVEEANDLD+FYRRLDP PG CCGMCTQL LN  IV LLV+G +ANAGDLNPAVL  G   NIII MTIV+TDN   +P      VFEVV+   DW + PCS+L++DC VF+N+E+ MFAPDA  GFATL++DAV    A++D+N++ST C + C+ A +C   D  L+P+  G+ FG+ +QS+FNNGFC P I+DDPH+ GLRGQ +DW+G+DGGWYAFLSTPDQLQMNLRVTSHLP TFPERQLVTGVALVT+GGHTI  +IVDPLDL+PTC GTVDA GSAPCLVNGGLR+TVDGRE++ G AGEY FDGDI ITA NLPLECQRFGDY+MWG LD EQRLR GSR LRSA    ++F+WL+ADSVMIAP WCVKYL EL+GDV+ALA ++SSHAVLRI +PNLSLRVNVGINTE+EQTLQDGRVVPTASFWQMDVRVE+AEG+A AKGML
Sbjct:    4 ILRLSHLMQVQKT-MRGFTPFVLLLATKVDFSTGHAVNVLQHDG-RRALSAVEEANDLDLFYRRLDPGPGQCCGMCTQLTLNSRIVELLVSGDDANAGDLNPAVLGAGASFNIIIIMTIVFTDNAAADPSKVEMNVFEVVITPDDWTDVPCSYLEDDCVVFENDELFMFAPDAPGGFATLSLDAVNEINANTDINVISTKCTLVCENASDC---DSDLDPADDGVDFGVIQQSMFNNGFCTPRIWDDPHLTGLRGQHFDWYGQDGGWYAFLSTPDQLQMNLRVTSHLPATFPERQLVTGVALVTEGGHTITADIVDPLDLAPTCHGTVDAVGSAPCLVNGGLRITVDGREQLQG-AGEYDFDGDIHITAVNLPLECQRFGDYMMWGDLDVEQRLRGGSRSLRSA---ETVFDWLVADSVMIAPAWCVKYLKELNGDVTALASMKSSHAVLRIGTPNLSLRVNVGINTEREQTLQDGRVVPTASFWQMDVRVEHAEGMATAKGML 498

[Close]

BLAST of mRNA_L-elsbetiae_contig6046.14586.1 vs. uniprot
Match: A0A6H5JNZ2_9PHAE (VWFA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNZ2_9PHAE)

HSP 1 Score: 189 bits (480), Expect = 4.030e-49
Identity = 123/312 (39.42%), Postives = 177/312 (56.73%), Query Frame = 1

Query:  565 DSDVNIVSTTCDVRCQVAGECEG--IDPSLEPSGTGIPFGMPRQSVFNNG--FCDPS--IFDDPHVHGLRGQRYDWFGEDGGWYAFLSTPDQ-LQMNLRVTSHLPVTFPERQLVTGVALVTDGGHTIMVEIVDPL--DLSPTCQGTVDAGGSAPCLVNGGLRVTVDGREEV---HGGAGEYRFDGDIQITAFNLPLECQRFGDYLMWGGLDEEQRLRSGSRGLRSAGAVSSIFEWLLADSVMIAPPWCVKYLDELHGDVSALAGVQSSHAVLRIESPNLSLRVNVGINTEQEQTLQ-DGRVVPTASFWQMDV 1461
            D DV+ VST   +     G C G  + P  +  G  +     ++SV N G   C     I DDPH+ GL GQ  DWFG DG WY+F+  PD  L++N+R+T+ LP  FP+RQLVTG++++++G H++++E+ +P   DL+  C      G   PCL NGGL VTVDG + V   H   GE    G I+++A NLP++C +FG + +W    E    R   R LR+     S  +W+L+ + M A  WC +Y+ E       L GVQSSHA+ +I +P + +R+NVGI  +    +  DGRV+P    WQMDV
Sbjct:  346 DDDVH-VSTIFRMERTTDGRCRGQFLHPLQDLGGRALEL---QKSVKNLGGVICPKGSHICDDPHMKGLLGQSIDWFGVDGEWYSFVKDPDMDLRVNVRLTAPLPDDFPDRQLVTGLSVISEG-HSLVLEVTNPYSTDLNDGCPD----GSPTPCLANGGLSVTVDGEKNVGLIHPIRGEI-LPGGIEVSADNLPVQCWQFGGHKIWARHYEAILAR---RKLRA----QSFEDWVLSFTDMAAHDWCTEYISE-----KGLTGVQSSHAIYQIVTPAVVVRLNVGIGHQDGDEVDWDGRVLPDLDVWQMDV 635

[Close]

BLAST of mRNA_L-elsbetiae_contig6046.14586.1 vs. uniprot
Match: D8LMW2_ECTSI (Imm upregulated 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMW2_ECTSI)

HSP 1 Score: 176 bits (445), Expect = 2.640e-47
Identity = 100/268 (37.31%), Postives = 160/268 (59.70%), Query Frame = 1

Query:  724 IFDDPHVHGLRGQRYDWFGEDGGWYAFLSTPD-QLQMNLRVTSHLPVTFPERQLVTGVALVTDGGHTIMVEIVDPLDLSPTCQGTVDAGGS----APCLVNGGLRVTVDGREEVHGGAGEYRF-------DGDIQITAFNLPLECQRFGDYLMWGG-----LDEEQRLRSGSRGLRSAGAVSSIFEWLLA-DSVMIAPPWCVKYLDELHGDVSALAGVQSSHAVLRIESPNLSLRVNVGINTEQEQTLQ-DGRVVPTASFWQMDVRVE 1470
            ++ DPH+ GLRGQR +W G DGGWY+ +      L +N+RVT+ LP  FP+RQL+T +A++++G +++++E+ +P         T+  GG     +PCL NGGLR+ VDG+E         RF       DG + ++A NLP+EC++FG + +W       L++ ++LR G           S+ EW+L  D  M A  WC KY+ E     + LA +Q++HA+ +I++P +++R+N G+N + +  L  DGRV+P   FWQMDV ++
Sbjct:   12 MWGDPHMRGLRGQRINWSGVDGGWYSLVKDDHADLSINVRVTAPLPDEFPDRQLMTSLAIMSEG-YSVVIEVENPY--------TIVTGGCPEGVSPCLANGGLRIIVDGQEVDE----LLRFSRQMPVADGTMTMSASNLPVECRQFGGHRIWARMYQDILEDRRQLRGGE----------SLEEWILRYDQNMPARRWCAKYIAE-----NDLADLQANHAIFKIQTPTVTVRLNAGVNYQGDGELNWDGRVLPDLEFWQMDVGID 251

[Close]

BLAST of mRNA_L-elsbetiae_contig6046.14586.1 vs. uniprot
Match: A0A6H5JS96_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS96_9PHAE)

HSP 1 Score: 174 bits (442), Expect = 8.050e-46
Identity = 98/265 (36.98%), Postives = 155/265 (58.49%), Query Frame = 1

Query:  712 CDP--SIFDDPHVHGLRGQRYDWFGEDGGWYAFLSTPD-QLQMNLRVTSHLPVTFPERQLVTGVALVTDGGHTIMVEIVDPLDLSPTCQGTVDAGGSAPCLVNGGLRVTVDGREEVHGGAGEYRF-------DGDIQITAFNLPLECQRFGDYLMWGGLDEEQRLRSGSRGLRSAGAVSSIFEWLLA-DSVMIAPPWCVKYLDELHGDVSALAGVQSSHAVLRIESPNLSLRVNVGINTEQEQTLQ-DGRVVPTASFWQMDVRVE 1470
            C P  ++  DPH+ GLRGQR DW G DGGWY+ +   +  + +N+R+T+ LP  FP+RQL+T +A+++ G H++++E+ +P  +     G  +  G +PCL NGGLR+ VD ++         RF       DG + +++ NLP+ECQ+FG   +W  + ++        G R      S+ EW+L  D  M AP WC KY+ E     + LA +QS HA+ +I++P +++R+N G+N +    L  DGRV+P   FWQM V ++
Sbjct:  105 CPPGDAVCGDPHMQGLRGQRIDWSGVDGGWYSLIKDDNIDININVRLTAPLPDEFPDRQLMTSLAVLSKG-HSVVIEVENPYTV--VTNGCPE--GVSPCLANGGLRIIVDSQQVDE----LLRFSRHVPVADGAMTVSSSNLPVECQQFGGDRIWARMYQDM-----IEGRRELHGDESLEEWILKYDHGMAAPGWCAKYIAE-----NDLADLQSDHAIFKIQTPTVTVRLNAGVNYQGNGELNWDGRVLPDLEFWQMGVGMD 350

[Close]

BLAST of mRNA_L-elsbetiae_contig6046.14586.1 vs. uniprot
Match: A0A6H5JP37_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP37_9PHAE)

HSP 1 Score: 150 bits (379), Expect = 5.830e-38
Identity = 91/270 (33.70%), Postives = 149/270 (55.19%), Query Frame = 1

Query:  682 PRQSVFNNGFCDPSIFDDPHVHGLRGQRYDWFGEDGGWYAFLSTPD-QLQMNLRVTSHLPVTFPERQLVTGVALVTDGGHTIMVEIVDPLDLSPTCQGTVDAGGS----APCLVNGGLRVTVDGREEVHGGAGEYRFDGDIQITAFNLPLECQRFGDYLMWGGLDEEQRLRSGSRGLRSAGAVSSIFEWLLA-DSVMIAPPWCVKYLDELHGDVSALAGVQSSHAVLRIESPNLSLRVNVGINTEQEQTLQ-DGRVVPTASFWQMDVRVE 1470
            PR +  ++      I+ DPH+ GL GQR +W G DGGWY+ +   +  L +N+RVT+ LP  FP+RQL+T +A++++G +++++E+ +P         T D GG     +PC  NGGLR+ VDG E               ++  F+  +     G   +W  + ++  +  G R LR      S+ EW+L  D  M A  WC KY+ E     + LA +Q++HA+ +I++P +++R+N G+N +    L  DGRV+P   FWQ+DV ++
Sbjct:    3 PRPTYVDDDDNADHIWGDPHMRGLLGQRVNWSGFDGGWYSLIKDDNADLHINVRVTAPLPDEFPDRQLMTSLAIMSEG-YSVVIEVKNPY--------TTDTGGCPEDVSPCHANGGLRIIVDGHEV-------------DELLRFSRQMP----GGKRIWARMYQD--ILEGRRQLRGG---ESLEEWILRYDQNMPARTWCAKYIAE-----NDLADLQANHAIFKIQTPTVTVRLNAGVNYQSNGELNWDGRVLPDLEFWQIDVGID 236

[Close]

BLAST of mRNA_L-elsbetiae_contig6046.14586.1 vs. uniprot
Match: A0A6H5JW46_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW46_9PHAE)

HSP 1 Score: 145 bits (367), Expect = 2.010e-35
Identity = 92/271 (33.95%), Postives = 145/271 (53.51%), Query Frame = 1

Query:  718 PSIFDDPHVHGLRGQRYDWFGEDGGWYAFLSTPDQLQMNLRVTSHLPVTFPERQLVTGVALVTDGG----HTIMVEIVDPLDLSPTCQGTVDAGGSAPCLVNGGLRVTVDGREEVHGGAGEYRFDGDIQITAFNLPLECQRFGDYLMWGGLDEEQRLRSGSRGLRSAGAVSSIFEWLLADSVMIAPPWCVKYLDELHGDVSALAGVQSSHAVLRIESPNLSLRVNVG----INTEQEQTLQDGRVVPTASFWQMDVRVEYAEGIAAAKGML 1506
            P    DPH+ G  GQ++D+ GEDGG+YA +S    + MN+RVTS +P + PE   +TG++L+T       H+I++E+ +P D+   C       G +PCL +G LRV ++G+EE+         DG I +TA NLP EC+ FG    W    E ++L +   G R  G   S+ +WLL D        C++Y+ +  G    L  +QS HA  +I +P  ++R++ G    I T       D   +P  + WQM++ +++ E   +A G+L
Sbjct:   85 PRACGDPHMTGFLGQKFDFTGEDGGYYALISDFPNMHMNMRVTSPVP-SLPEITYITGLSLLTTDANGEVHSIVIEVKNPHDIESACP-----AGVSPCLADGSLRVMLNGKEELSAPGSVALADGVI-VTAVNLPGECRSFGFEHYW----ERKKLENARHG-RHLGE-QSMGDWLLGDPTATNMDECMEYVAQAEGQAGGLFALQSEHASFQIVTPTATVRLSHGRLHQIATRDPTNRFD---LPDHTTWQMNMGIDHNEVSYSATGIL 339

[Close]

BLAST of mRNA_L-elsbetiae_contig6046.14586.1 vs. uniprot
Match: A0A6H5KVF3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVF3_9PHAE)

HSP 1 Score: 136 bits (343), Expect = 7.610e-31
Identity = 93/304 (30.59%), Postives = 156/304 (51.32%), Query Frame = 1

Query:  631 GIDPSLEPSGTGIPFGM------PRQSVFNNGFCDPSIFDDPHVHGLRGQRYDWFGEDGGWYAFLSTPDQLQMNLRVTSHLPVT-FPERQLVTGVALVT---DG-GHTIMVEIVDPLDLSPTCQGTVDAGGSAPCLVNGGLRVTVDGREEVHGGAGEYRFDGDIQITAFNLPLECQRFGDYLMWGGLDEEQRLRSGSRGLRSAGAVSSIFEWLLADSVMIAPPWCVKYLDELHGDVSALAGVQSSHAVLRIESPNLSLRVNVG-INTEQEQTLQDGRVVPTASFWQMDVRVEYAEGIAAAKGML 1506
            G++P+     +G P G+          VF +   D  I  DPH+ G  GQ++D+ GEDGGWY+ ++  + + +N+RVTS  PV   PE   +TG++++T   DG  H+I++E++DP +L  +C       G +PCL +G L V +DG E +    G      D++++A NLP  C+ FG    W    E ++L +   G R      S+ EW+L D        CV+Y+     +   +   QS H   +I +P  ++R++ G ++    +   D   +P    WQM++ + + +   AAKG+L
Sbjct:  279 GLNPTCSCGESGCPDGLICCEKKDYCDVFGDESVDGVICGDPHMTGFLGQKFDFTGEDGGWYSVIADSN-MNVNMRVTS--PVADLPEITYITGLSVLTTDTDGLEHSIVIEVIDPHNLDSSCP-----AGVSPCLGDGALVVLLDGVESLFA-PGTVALGADVEVSAANLPGACRSFGFEKYW----ERKKLENARAG-RLLRTTPSMGEWILGDPTATNMNECVEYVARAEAEEGGVFAHQSEHVSFQIVTPKATVRLSHGRLHQIAMRDPTDRFDLPDHLTWQMNMAIHHEDVSHAAKGIL 568

[Close]

BLAST of mRNA_L-elsbetiae_contig6046.14586.1 vs. uniprot
Match: A0A6H5KRS2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRS2_9PHAE)

HSP 1 Score: 125 bits (315), Expect = 3.680e-28
Identity = 79/271 (29.15%), Postives = 137/271 (50.55%), Query Frame = 1

Query:  715 DPSIFDDPHVHGLRGQRYDWFGEDGGWYAFLSTPDQLQMNLRVTSHLPVTFPERQLVTGVALVTDGG----HTIMVEIVDPLDLSPTCQGTVDAGGSAPCLVNGGLRVTVDGREEVHGGAGEYRFDGDIQITAFNLPLECQRFGDYLMWGGLDEEQRLR-SGSRGLRSAGAVSSIFEWLLADSVMIAPPWCVKYLDE--LHGDVSALAGVQSSHAVLRIESPNLSLRVNVGINTEQEQTLQDGRVVPTASFWQMDVRVEYAEGIAAAKGML 1506
            DP+   DPH+ G  GQ++D+ G+DG WY  +S    + +N+RVT+ +P + P+   +TG++L+T  G    H++++ + DP  L  +C       G  PCL NG L V++DG+E +    G      +++++  NLP  C+ FG    W    E ++L  + + G R +     + +W+L D        C +Y+    + G    L   +S HA  +I  P  ++R++ G      Q  Q G  +P  S WQM++ ++       A+G+L
Sbjct:   51 DPTACGDPHMTGFHGQKFDFTGDDGEWYCLISDLPSMNLNMRVTAPVP-SRPDITYITGISLITQDGNGLDHSVVITVKDPHSLESSCP-----AGVTPCLANGALSVSLDGKEALSA-PGVVEMAPNMKVSVVNLPGACRSFGFEKYW----ERKKLEYAQAGGRRLSSKDQDMGDWILGDPTATNMAECTEYVARHVVEGGDGGLFAHKSEHASFQIVMPIATVRLSHG---RLHQIAQYG--LPDHSTWQMNLAIDSDSVGVGAQGVL 305

[Close]

BLAST of mRNA_L-elsbetiae_contig6046.14586.1 vs. uniprot
Match: D7G4E8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4E8_ECTSI)

HSP 1 Score: 115 bits (288), Expect = 6.950e-27
Identity = 57/110 (51.82%), Postives = 78/110 (70.91%), Query Frame = 1

Query:  724 IFDDPHVHGLRGQRYDWFGEDGGWYAFLSTPD-QLQMNLRVTSHLPVTFPERQLVTGVALVTDGGHTIMVEIVDPLDLSPTCQGTVDAGGSAPCLVNGGLRVTVDGREEV 1050
            I DDPH+ GLRGQ  DWFG DGGWYAF+   D  L +N+R+T+ LP  FPERQLVTG++++  G H++++E+ +P D      G +D G S PCL NGGL VTV+G +++
Sbjct:    7 ICDDPHMKGLRGQHIDWFGVDGGWYAFIKDDDIDLHVNVRLTAPLPEEFPERQLVTGLSVIA-GEHSLILEVTNPYDTDIN-GGCLD-GMSTPCLANGGLSVTVNGEKQM 113

[Close]

BLAST of mRNA_L-elsbetiae_contig6046.14586.1 vs. uniprot
Match: A0A6H5L5Y7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5Y7_9PHAE)

HSP 1 Score: 116 bits (291), Expect = 2.560e-25
Identity = 84/281 (29.89%), Postives = 137/281 (48.75%), Query Frame = 1

Query:  721 SIFDDPHVHGLRGQRYDWFGEDGGWYAFLSTPDQLQMNLRVTSHLPVTFP----------------ERQLVTGVALVTDGGHTIMVEIVDPLDLSPTCQGTVDAGGSAPCLVNGGLRVTVDGREEVHGGAGEYRFDGDIQITAFNLPLECQRFGDYLMWGGLDEEQRLR--SGSRGLRSAGAVSSIFEWLLADSVMIAPPWCVKYLDELHGDVSALAGVQSSHAVLRIESPNLSLRVNVG-INTEQEQTLQDGRVVPTASFWQMDVRVEYAEGIAAAKGML 1506
            S+   PH+ G  GQ++D+ GEDGGWY+ ++  + + +N+RVTS    T P                ER+L           H+I++E+ +P  L  +C       G +PCL +G LRV +DG E +    G       ++I+A NLP  C+ FG    W    E ++L   +G R LR+     S+ EW+L D        CV+Y+     +   +   QS HA  +I +P  ++R++ G ++    +   D   +P    WQM++ V++ +   AAKG+L
Sbjct:    6 SLSGGPHMTGFLGQKFDFTGEDGGWYSIIADSN-MNVNMRVTSPSS-TCPRSPTSQRLGAYSSAVLERRLSVLTTDADGSDHSIVIEVAEPHSLDSSCP-----AGVSPCLADGALRVLLDGDEALFA-HGTVSLGLGVEISAVNLPGACRSFGFEKYW----EHKKLEYATGGRQLRTQ---PSMGEWILGDPTATNMDECVEYVARAEAEEGGMFAHQSEHASFQIVTPAATVRLSHGRLHQIAMRDPTDQYDLPDHLTWQMNLAVDHNQVSYAAKGIL 271

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig6046.14586.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig6046.14586.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 12


Match Name	E-value	Identity	Description
D7G544_ECTSI	8.240e-264	72.22	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JNZ2_9PHAE	4.030e-49	39.42	VWFA domain-containing protein n=1 Tax=Ectocarpus ...	[more]
D8LMW2_ECTSI	2.640e-47	37.31	Imm upregulated 3 n=1 Tax=Ectocarpus siliculosus T...	[more]
A0A6H5JS96_9PHAE	8.050e-46	36.98	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JP37_9PHAE	5.830e-38	33.70	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JW46_9PHAE	2.010e-35	33.95	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KVF3_9PHAE	7.610e-31	30.59	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KRS2_9PHAE	3.680e-28	29.15	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7G4E8_ECTSI	6.950e-27	51.82	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5L5Y7_9PHAE	2.560e-25	29.89	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig6046	contig	L-elsbetiae_contig6046:2306..6916 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Properties


Property Name	Value
Hectar predicted targeting category	signal peptide
Ec32 ortholog description	expressed unknown protein
Ec32 ortholog	Ec-00_008450.1
Exons	3
Model size	1506
Cds size	1485
Stop	0
Start	1

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig6046.14586.1	prot_L-elsbetiae_contig6046.14586.1	Laminarionema elsbetiae ELsaHSoW15	polypeptide	L-elsbetiae_contig6046 2306..6895 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622816660.3725483-CDS-L-elsbetiae_contig6046:2305..3577	1622816660.3725483-CDS-L-elsbetiae_contig6046:2305..3577	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig6046 2306..3577 -
1691683720.2231772-CDS-L-elsbetiae_contig6046:2305..3577	1691683720.2231772-CDS-L-elsbetiae_contig6046:2305..3577	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig6046 2306..3577 -
1622816660.386559-CDS-L-elsbetiae_contig6046:5886..5983	1622816660.386559-CDS-L-elsbetiae_contig6046:5886..5983	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig6046 5887..5983 -
1691683720.2356267-CDS-L-elsbetiae_contig6046:5886..5983	1691683720.2356267-CDS-L-elsbetiae_contig6046:5886..5983	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig6046 5887..5983 -
1622816660.3997018-CDS-L-elsbetiae_contig6046:6779..6895	1622816660.3997018-CDS-L-elsbetiae_contig6046:6779..6895	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig6046 6780..6895 -
1691683720.2460232-CDS-L-elsbetiae_contig6046:6779..6895	1691683720.2460232-CDS-L-elsbetiae_contig6046:6779..6895	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig6046 6780..6895 -

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622816660.4185543-UTR-L-elsbetiae_contig6046:6895..6916	1622816660.4185543-UTR-L-elsbetiae_contig6046:6895..6916	Laminarionema elsbetiae ELsaHSoW15	UTR	L-elsbetiae_contig6046 6896..6916 -
1691683720.254834-UTR-L-elsbetiae_contig6046:6895..6916	1691683720.254834-UTR-L-elsbetiae_contig6046:6895..6916	Laminarionema elsbetiae ELsaHSoW15	UTR	L-elsbetiae_contig6046 6896..6916 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at L-elsbetiae_contig6046:2306..6916-
coding sequence from alignment at L-elsbetiae_contig6046:2306..6916-

protein sequence of mRNA_L-elsbetiae_contig6046.14586.1

>prot_L-elsbetiae_contig6046.14586.1 ID=prot_L-elsbetiae_contig6046.14586.1|Name=mRNA_L-elsbetiae_contig6046.14586.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=495bp
MHVQDTIMRGFTPFLLLLAAKVDFTAGHAVNVLQHGGGRRALSAVEEAND
LDIFYRRLDPPPGDCCGMCTQLVLNPEIVVLLVAGAEANAGDLNPAVLED
GVNIIIRMTIVYTDNIPGNPPNPPPLVFEVVVETQDWNNEPCSFLQEDCE
VFKNNEILMFAPDARNGFATLTIDAVTAFTADSDVNIVSTTCDVRCQVAG
ECEGIDPSLEPSGTGIPFGMPRQSVFNNGFCDPSIFDDPHVHGLRGQRYD
WFGEDGGWYAFLSTPDQLQMNLRVTSHLPVTFPERQLVTGVALVTDGGHT
IMVEIVDPLDLSPTCQGTVDAGGSAPCLVNGGLRVTVDGREEVHGGAGEY
RFDGDIQITAFNLPLECQRFGDYLMWGGLDEEQRLRSGSRGLRSAGAVSS
IFEWLLADSVMIAPPWCVKYLDELHGDVSALAGVQSSHAVLRIESPNLSL
RVNVGINTEQEQTLQDGRVVPTASFWQMDVRVEYAEGIAAAKGML

mRNA from alignment at L-elsbetiae_contig6046:2306..6916-

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_L-elsbetiae_contig6046.14586.1 ID=mRNA_L-elsbetiae_contig6046.14586.1|Name=mRNA_L-elsbetiae_contig6046.14586.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4611bp|location=Sequence derived from alignment at L-elsbetiae_contig6046:2306..6916- (Laminarionema elsbetiae ELsaHSoW15)
GTCTTGCGCCTCTCGTACTTGATGCACGTGCAGGACACCATCATGAGAGG
CTTCACGCCGTTCTTGCTTCTGCTTGCCGCAAAGGTGGACTTCACCGCGG
GCCATGCTGTGAACGTTTTACAGCACGGCGGGGGAAGGTGATGCCGAACA
GATGCTTTGGTAAAAACAGTTCAAAGTATGTTTGTTGCCGACACCCCTGC
ATTGGTAGTAGTATTTGTAATCTCTCGTACTTGCGAATAGGATTCGATAA
ATATACCCCAAAAGCCGATCTTTTGGTAACACAGCGCGTAACCCTGACGA
CCCAGCGGCGGCCCTGCACAAAAGCCATTTGTTTTCACTTGTATTAGTTC
GAGAAGGCGGGCATCAAATGTTTTCTGGTCAAGTCTGCTGCTGTGATAGT
GATCGGGTAGTTCCTCACCCAAAACCCTGTCACCCATAGATAGTCGGCCA
GGACTGGCTTGGGCAAAAAAACAAAACACCCCTCTCCTATGTAGCACCCG
ACCGTCGAGATGTAACATATACGCACACTCTATAATACTCCTATTGTAGG
GCGGCTCGATCTCTGTTGAAGCACGCTCTGCACAAAGGGAGATCATTTTC
ATCTGTTGTCTCGCCAACCTGTTGAACCACCTACTCCTATATAGTATTGA
TACAAGAGATGGCACCCAAAATATATGTCTGTCTACCCAGTGCCTGAAAC
GCAGGCGCCGCAAACGACGAGCAAAGCGTAAAAAACGCAAGGGCCTAAAC
CGTGGCAGCTCTTGCTACACTAGTAGGCGTACGTTGGCTGCAATCCATCC
TTTCCATTTCGCGAAGGAATGTCCCCTCGCCCCCGAAAAGCCCCCTTCTC
CTCAGTGATGATGCCACGATCTGACGACGTGTTGAACTTTCAAACTCTTC
GCATGCATATCTTGTGACGTTGCTGTAATCCAGGCGCGCCCTTTCTGCAG
TGGAAGAGGCCAACGACCTGGACATATTCTACCGTCGCCTAGACCCACCC
CCTGGAGACTGCTGTGGGATGTGCACTCAGGTGCACGACTCGTGGCCTTT
ATTTTGCGAGATATAAAAAAACGGTTTGCGCACCATGTCAAATGTATGCG
TTCCGTGCGTTTGAAACAGAAGACGGGTGGCGAGGAGTCTCAAACCCCTC
GCAATGCATCAGGGGGGTGCGCAATCGAAGACATCGATGTACCGCAAGTA
CCTGCATCGTGGAAATTTCAAATTCCGGGGTAAAATATAACGGCGAGTTT
GTCTGTTAACGTGGAGGCTCATCTGCCTGTCCCAGTGTTGCACCTATCAG
ACCTGGTCCTCTACATATTGATGCGGACACACCGCGGGCAATGGCACCCT
GTACAAGTTTGTTATTTTAGTTGTCCGTTTTGTTTGTTTTTCGCAGTCCC
CAGTGCGTTCTCTCCGATGTGTGTGATATGGCCGAACTGATCGTTTTCGT
TGTCTCACGTACCCCCTATATACGAGTTCTCGGTGATACGTGCGATATTG
AAACAAATCGCACCGACTATTCAGGGCACCGTGAGAATTTGGGTCATGAG
CAACTTTACGACTTCTACATACAGACATCGCGTGCATTCACCTATACGTG
TCGACATAGGAGAGTGTTCAAACGTCGGTGCGTCGGTGATACAAACAGCT
CGGTGAAATACCGCAAGTGCCGACAAACGCGGCGAAATACAAAGCATCGA
CGGGATTTCGATGCAGCTGCCTGCCAGAGATCCAATTGCCCCCTTCCAGC
TCTCCTATGGTCTGATGTGTTTGCCTACATCATATTTGTTTCCGAGGCAT
TTTAGCTACGATAGGTCTGTGTTCGTCTTCTGTGTTCGCTTTCGGCTTCG
GTAGATTGGGTGCACGTGCCCCTCCTGTGTGCTGCTTGAGTGATGCGTTT
TCGTTACTCCACGATGAGCACGAGTGACATTTGTACGCAGACACCACCAC
CGTCCGATTCATAGATACAGCAGAGAACCAGAGAGGCGTCGTATTTCCAA
TTCCAATAGAGGTGCTCAACACCTCACTCGTGACAGCACCACAGGTGGCC
ACTGGGGAACGTTTTTTTTTGTGATCCGTACTCCCGCAGCATCGTGCAAA
CCTGTCGAACCCCTGTCGAAACCTGCGGCGCGACTCTCCGTAAGGTCGAG
GATGCCAAGGGGTTCGGCAACGCAGCCCAAATCCTAGGCTCACTATCCCT
GTCGTGATTTTGTTGTGGTAGACAAATATGTCATGGAGCAAAACTTGACG
TACAACAATTTGGCAATCCAGAGAGAAGGATATTCAGAGTCGTGCCTTGG
GGTCGGTTATGGCAGAGTGTGCTCATCGGTCGCGTCGTCGGCGTTGTCAG
TATTTTCTCGGTCCACTTCAGACTCATGAAAATGTTAGGCTCCCGCGTTG
GCCATTTTATGACATTGAGCGCAGCGGTAGACTACTGTATACTCAGGTGC
CAGAAGTTCCTGGTTTGAACCCCGCCCCTCTCGTCTTGTGCCTTGTCATA
ACTCTTCCATCAAGAACAGGAGAGGATCAATTATCGTCCATCCCGATCCA
AGGGTTGAAGGCGCACCGTGCGTTGGTTATTAATACTATTGCTTCAGTCA
TTTTTCACCGTTTTTAAATCTCGCCCTTCTTTTTTCACAACCCTGAGTAC
AGTAGAACAACCCTGTGGTTACGTAACCTGGGCACGTTGTGCCGATTATT
TTGTACAACTTCGCCGCTACATCCCGCAGCGCGGAGAACCCCCCCATGGC
AATTCCGCAGAACGCGCCCGTACAACGTGCACCAGTGCCCACTTGTGGCG
CAACCTCATCCCAAAAGCGAGCGTTTAACGAGACAAATTGAAAACCAAAC
ATACGCCCTCCTGTGCAAGCTCAACAACCCTAGCGCAAAATCAACTACAT
CCACTCGGTTTAGCTCTTTAAGCGCACCCTTGTGCGTTATTTTCGATAAA
TATGTGTTAAACTGCCGGTCTGTGCTTGCTTCCCGCTCTTCACGCCACTT
GCAGCCCTTTGGCACACCGAGTGCCAAATTTCCAACTTTGAAACCTTTTC
CAGCCTAGAACAGTTCATAGCACGTTGCAGCCGACATCGTGGTACTCCTT
GCCTGTATATGCAGCCGGTCGCTGCACGTGTAGTCAAGCATTCCCGAAGG
ACTGAACTGTACGCATGCCCACCCACTCCTACCATTAAAACCATACGTCA
GCGTACTCTGAAACGCCGCTGCCCGTGCAGTAGCATACCCGCACATGTTT
GTCGCCCGAAAGCAGAAAGAACAACGAACGCTCCTTAAACCTTGTGTGTA
TTCCCCTTGCCCCTGTCAATCCTCACGTACCCTACGCAGCTTGTTCTGAA
CCCGGAAATTGTGGTGCTTCTCGTTGCGGGCGCCGAGGCGAACGCCGGCG
ATCTCAACCCTGCTGTTTTGGAGGATGGCGTCAACATCATCATCCGCATG
ACCATCGTGTACACAGATAACATACCCGGCAACCCGCCCAACCCGCCGCC
GCTCGTGTTCGAGGTGGTCGTCGAAACCCAAGACTGGAACAATGAGCCCT
GCAGCTTTCTCCAGGAAGACTGCGAGGTGTTCAAGAACAACGAAATCCTC
ATGTTTGCTCCCGATGCCCGGAATGGATTCGCCACGCTCACTATCGATGC
GGTGACCGCATTCACGGCCGACTCAGACGTCAACATTGTTAGCACCACCT
GCGACGTCCGCTGCCAGGTTGCGGGCGAGTGCGAAGGGATAGACCCATCT
CTCGAGCCGTCTGGCACGGGCATTCCTTTCGGGATGCCCCGTCAATCCGT
CTTCAACAATGGCTTCTGCGACCCTTCCATATTCGATGACCCTCACGTAC
ATGGCCTCCGCGGCCAGCGTTACGACTGGTTCGGGGAGGATGGCGGCTGG
TATGCCTTCCTGTCGACCCCGGACCAGCTTCAGATGAACCTGCGAGTCAC
CTCTCACCTGCCCGTGACGTTTCCCGAGCGCCAGTTGGTGACCGGCGTTG
CCCTGGTGACCGACGGCGGCCATACGATAATGGTCGAAATTGTAGACCCC
CTTGATCTGTCACCCACTTGCCAGGGCACCGTGGACGCCGGCGGGTCGGC
GCCTTGTCTGGTCAACGGCGGTCTGCGCGTAACTGTAGATGGGCGCGAGG
AGGTGCACGGCGGCGCTGGCGAGTACCGCTTCGACGGCGACATCCAAATC
ACGGCCTTCAATCTCCCCCTCGAGTGCCAGAGGTTCGGTGACTACCTGAT
GTGGGGGGGGCTCGACGAGGAGCAGAGGCTCAGGAGTGGTTCGCGTGGTC
TGCGGTCCGCTGGAGCGGTCAGTTCCATCTTCGAATGGCTCCTAGCGGAT
TCCGTCATGATCGCCCCGCCGTGGTGCGTGAAGTACCTCGACGAGCTCCA
TGGCGACGTGAGCGCCCTTGCCGGCGTTCAGTCCAGCCACGCTGTGCTGC
GGATCGAGTCGCCAAACCTGTCGCTGCGTGTGAACGTGGGCATCAACACG
GAGCAGGAGCAGACCCTGCAGGACGGTCGCGTCGTGCCCACCGCCTCTTT
CTGGCAGATGGACGTGCGCGTCGAGTATGCCGAGGGCATCGCTGCCGCCA
AGGGGATGCTC

Coding sequence (CDS) from alignment at L-elsbetiae_contig6046:2306..6916-

>mRNA_L-elsbetiae_contig6046.14586.1 ID=mRNA_L-elsbetiae_contig6046.14586.1|Name=mRNA_L-elsbetiae_contig6046.14586.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2970bp|location=Sequence derived from alignment at L-elsbetiae_contig6046:2306..6916- (Laminarionema elsbetiae ELsaHSoW15)
ATGCACGTGCAGGACACCATCATGAGAGGCTTCACGCCGTTCTTGCTTCT
GCTTGCCGCAAAGGTGGACTTCACCGCGGGCCATGCTGTGAACGTTTTAC
AGCACGGCGGGGGAAGATGCACGTGCAGGACACCATCATGAGAGGCTTCA
CGCCGTTCTTGCTTCTGCTTGCCGCAAAGGTGGACTTCACCGCGGGCCAT
GCTGTGAACGTTTTACAGCACGGCGGGGGAAGGCGCGCCCTTTCTGCAGT
GGAAGAGGCCAACGACCTGGACATATTCTACCGTCGCCTAGACCCACCCC
CTGGAGACTGCTGTGGGATGTGCACTCAGGCGCGCCCTTTCTGCAGTGGA
AGAGGCCAACGACCTGGACATATTCTACCGTCGCCTAGACCCACCCCCTG
GAGACTGCTGTGGGATGTGCACTCAGCTTGTTCTGAACCCGGAAATTGTG
GTGCTTCTCGTTGCGGGCGCCGAGGCGAACGCCGGCGATCTCAACCCTGC
TGTTTTGGAGGATGGCGTCAACATCATCATCCGCATGACCATCGTGTACA
CAGATAACATACCCGGCAACCCGCCCAACCCGCCGCCGCTCGTGTTCGAG
GTGGTCGTCGAAACCCAAGACTGGAACAATGAGCCCTGCAGCTTTCTCCA
GGAAGACTGCGAGGTGTTCAAGAACAACGAAATCCTCATGTTTGCTCCCG
ATGCCCGGAATGGATTCGCCACGCTCACTATCGATGCGGTGACCGCATTC
ACGGCCGACTCAGACGTCAACATTGTTAGCACCACCTGCGACGTCCGCTG
CCAGGTTGCGGGCGAGTGCGAAGGGATAGACCCATCTCTCGAGCCGTCTG
GCACGGGCATTCCTTTCGGGATGCCCCGTCAATCCGTCTTCAACAATGGC
TTCTGCGACCCTTCCATATTCGATGACCCTCACGTACATGGCCTCCGCGG
CCAGCGTTACGACTGGTTCGGGGAGGATGGCGGCTGGTATGCCTTCCTGT
CGACCCCGGACCAGCTTCAGATGAACCTGCGAGTCACCTCTCACCTGCCC
GTGACGTTTCCCGAGCGCCAGTTGGTGACCGGCGTTGCCCTGGTGACCGA
CGGCGGCCATACGATAATGGTCGAAATTGTAGACCCCCTTGATCTGTCAC
CCACTTGCCAGGGCACCGTGGACGCCGGCGGGTCGGCGCCTTGTCTGGTC
AACGGCGGTCTGCGCGTAACTGTAGATGGGCGCGAGGAGGTGCACGGCGG
CGCTGGCGAGTACCGCTTCGACGGCGACATCCAAATCACGGCCTTCAATC
TCCCCCTCGAGTGCCAGAGGTTCGGTGACTACCTGATGTGGGGGGGGCTC
GACGAGGAGCAGAGGCTCAGGAGTGGTTCGCGTGGTCTGCGGTCCGCTGG
AGCGGTCAGTTCCATCTTCGAATGGCTCCTAGCGGATTCCGTCATGATCG
CCCCGCCGTGGTGCGTGAAGTACCTCGACGAGCTCCATGGCGACGTGAGC
GCCCTTGCCGGCGTTCAGTCCAGCCACGCTGTGCTGCGGATCGAGTCGCC
AAACCTGTCGCTGCGTGTGAACGTGGGCATCAACACGGAGCAGGAGCAGA
CCCTGCAGGACGGTCGCGTCGTGCCCACCGCCTCTTTCTGGCAGATGGAC
GTGCGCGTCGAGTATGCCGAGGGCATCGCTGCCGCCAAGGGGATGCTCCT
TGTTCTGAACCCGGAAATTGTGGTGCTTCTCGTTGCGGGCGCCGAGGCGA
ACGCCGGCGATCTCAACCCTGCTGTTTTGGAGGATGGCGTCAACATCATC
ATCCGCATGACCATCGTGTACACAGATAACATACCCGGCAACCCGCCCAA
CCCGCCGCCGCTCGTGTTCGAGGTGGTCGTCGAAACCCAAGACTGGAACA
ATGAGCCCTGCAGCTTTCTCCAGGAAGACTGCGAGGTGTTCAAGAACAAC
GAAATCCTCATGTTTGCTCCCGATGCCCGGAATGGATTCGCCACGCTCAC
TATCGATGCGGTGACCGCATTCACGGCCGACTCAGACGTCAACATTGTTA
GCACCACCTGCGACGTCCGCTGCCAGGTTGCGGGCGAGTGCGAAGGGATA
GACCCATCTCTCGAGCCGTCTGGCACGGGCATTCCTTTCGGGATGCCCCG
TCAATCCGTCTTCAACAATGGCTTCTGCGACCCTTCCATATTCGATGACC
CTCACGTACATGGCCTCCGCGGCCAGCGTTACGACTGGTTCGGGGAGGAT
GGCGGCTGGTATGCCTTCCTGTCGACCCCGGACCAGCTTCAGATGAACCT
GCGAGTCACCTCTCACCTGCCCGTGACGTTTCCCGAGCGCCAGTTGGTGA
CCGGCGTTGCCCTGGTGACCGACGGCGGCCATACGATAATGGTCGAAATT
GTAGACCCCCTTGATCTGTCACCCACTTGCCAGGGCACCGTGGACGCCGG
CGGGTCGGCGCCTTGTCTGGTCAACGGCGGTCTGCGCGTAACTGTAGATG
GGCGCGAGGAGGTGCACGGCGGCGCTGGCGAGTACCGCTTCGACGGCGAC
ATCCAAATCACGGCCTTCAATCTCCCCCTCGAGTGCCAGAGGTTCGGTGA
CTACCTGATGTGGGGGGGGCTCGACGAGGAGCAGAGGCTCAGGAGTGGTT
CGCGTGGTCTGCGGTCCGCTGGAGCGGTCAGTTCCATCTTCGAATGGCTC
CTAGCGGATTCCGTCATGATCGCCCCGCCGTGGTGCGTGAAGTACCTCGA
CGAGCTCCATGGCGACGTGAGCGCCCTTGCCGGCGTTCAGTCCAGCCACG
CTGTGCTGCGGATCGAGTCGCCAAACCTGTCGCTGCGTGTGAACGTGGGC
ATCAACACGGAGCAGGAGCAGACCCTGCAGGACGGTCGCGTCGTGCCCAC
CGCCTCTTTCTGGCAGATGGACGTGCGCGTCGAGTATGCCGAGGGCATCG
CTGCCGCCAAGGGGATGCTC