mRNA_L-elsbetiae_contig6033.14573.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6033.14573.1 vs. uniprot
Match: A0A6H5JRK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRK5_9PHAE) HSP 1 Score: 81.6 bits (200), Expect = 1.670e-14 Identity = 57/151 (37.75%), Postives = 77/151 (50.99%), Query Frame = 2 Query: 83 SIMAQSSRCLDA---FMVVLNER--GDRWWKRYTPTAELQLVSLQFCVAYRSISKIHLTVNTETPSCLWTNPAAAAAAAAVRGRVETRASKRPSSTRIPAVQLRTLTWEMPSWTSGSSLF---EKVECLKLGGEFRGSIARVVWPPGLKDL 511 +I+ RC ++ LNE G RW YT T ELQL SL+FC+A R + L V+ +TP N AA A +KRP TR+P ++ R + W MP+ T +L + V CL+ GG F GS+ VVWPP LK + Sbjct: 6 AILPAGRRCSSGSKDLILALNEMCDGKRW---YTSTKELQLASLEFCLACRKYQILELKVDAQTPR----NLLAAVDAPPPH-------TKRPCRTRVPRLRARRVKWNMPTATELRTLMFALKDVNCLRFGGVFNGSLEAVVWPPPLKQI 142
BLAST of mRNA_L-elsbetiae_contig6033.14573.1 vs. uniprot
Match: A0A6H5JFC0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFC0_9PHAE) HSP 1 Score: 79.0 bits (193), Expect = 5.690e-14 Identity = 58/147 (39.46%), Postives = 81/147 (55.10%), Query Frame = 2 Query: 89 MAQSSRCLDAFMVVLNER--GDRWWKRYTPTAELQLVSLQFCVAYRSISKIHLTVNTETPSCLWTNPAAAAAAAAVRGRVETRASKRPSSTRIPAVQLRTLTWEMPSWT---SGSSLFEKVECLKLGGEFRGSIARVVWPPGLKDLT 514 +A SRCLDAF V LN+ G W Y T +LQL SL FCVA RS+ +HL V+ TP+ L++ AAA VR + +SKR + R+PA++ R +TW++ T +G L VE LG S+ VW G++ L+ Sbjct: 24 IAGPSRCLDAFKVALNQACDGGGW---YVSTEQLQLSSLPFCVACRSVPTMHLKVDRSTPARLFSGDDDAAA---VRDKGHG-SSKRVMAARVPALRARKVTWQLSGETPRCTGVGL-SSVELFVLGDAVNDSMDEAVWSDGMRSLS 162
BLAST of mRNA_L-elsbetiae_contig6033.14573.1 vs. uniprot
Match: A0A6H5KMU8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMU8_9PHAE) HSP 1 Score: 71.2 bits (173), Expect = 3.980e-11 Identity = 50/136 (36.76%), Postives = 69/136 (50.74%), Query Frame = 2 Query: 113 DAFMVVLNE-RGDRWWKRYTPTAELQLVSLQFCVAYRSISKIHLTVNTETPSCLWTNPAAAAAAAAVRGRVETRASKRPSSTRIPAVQLRTLTWEMP--SWTSGSSLFEKVECLKLGGEFRGSIARVVWPPGLKDL 511 DA + LN+ G W YT +LQL SLQ C+A R + HLTV + + LW + +AA A R R+ + +R+PA++ R +TW + S FE V+ L G F + RV WPPGLK L Sbjct: 17 DALDIALNQVSGVNGW--YTSKLQLQLASLQLCLACRRVPTSHLTVERDVLALLWPH----SAAEATRSRLVSL-----GQSRVPALRPRKVTWNLATLSMRHCGDAFESVDVLVFGDSFDYRVDRVTWPPGLKKL 141
BLAST of mRNA_L-elsbetiae_contig6033.14573.1 vs. uniprot
Match: A0A6H5KPY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPY7_9PHAE) HSP 1 Score: 71.6 bits (174), Expect = 4.850e-11 Identity = 56/142 (39.44%), Postives = 74/142 (52.11%), Query Frame = 2 Query: 101 SRCLDAFMVVLNERGD-RWWKRYTPTAELQLVSLQFCVAYRSISKIHLTVNTETPSCLWTNPAAAAAAAAVRGRVETRASKRPSSTRIPAVQLRTLTWEMPSWTSG--SSLFEK--VECLKLGGEFRGSIARVVWPPGLKDL 511 S CL V LNE D + W YT T ELQL SL+ C+A R +HLTV+ TP L AAA A + KR TR+P ++ R TW +P+ SG +S+F V+ L+ G F GS+ +VWP LK + Sbjct: 134 SSCLKTLTVALNETCDGKSW--YTSTKELQLASLELCMACRHYQTLHLTVDAHTPRRLL----AAADAPSPH-------PKRLCGTRVPRLRARRATWNVPT-ASGMRTSIFATMDVDYLEFGQAFHGSLDAIVWPRRLKTI 261
BLAST of mRNA_L-elsbetiae_contig6033.14573.1 vs. uniprot
Match: A0A6H5JZZ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZZ4_9PHAE) HSP 1 Score: 67.8 bits (164), Expect = 1.060e-9 Identity = 51/142 (35.92%), Postives = 71/142 (50.00%), Query Frame = 2 Query: 98 SSRCLDAFMVVLNERGD-RWWKRYTPTAELQLVSLQFCVAYRSISKIHLTVNTETPSCLWTNPAAAAAAAAVRGRVETRASKRPSSTRIPAVQLRTLTWEMPSWTS-GSSLFEKVEC--LKLGGEFRGSIARVVWPPGLKDL 511 S+ CL+A V L E D + W YT T ELQL SL+FC+A R+ +HL V+ P L AA G + KR S R+P ++ R +TW MP+ S +F ++ L G F GS+ V WP L+ + Sbjct: 33 SNTCLNAIYVALGETRDGKSW--YTSTKELQLASLEFCMACRAYQTLHLIVDVRIPRMLL---------AAADGPPQH--PKRLSRRRVPRLRARHVTWNMPTAAELRSPIFALMDLDHLDFGSAFEGSLEAVTWPRRLESI 161
BLAST of mRNA_L-elsbetiae_contig6033.14573.1 vs. uniprot
Match: D7G0Z9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Z9_ECTSI) HSP 1 Score: 62.8 bits (151), Expect = 3.080e-9 Identity = 32/63 (50.79%), Postives = 41/63 (65.08%), Query Frame = 2 Query: 89 MAQSSRCLDAFMVVLNERGDRWWKR-YTPTAELQLVSLQFCVAYRSISKIHLTVNTETPSCLW 274 M + S+CLDAF+V LN+ D KR Y T ELQLVSL+FC A R + +H+ V+ TP LW Sbjct: 35 MTRRSKCLDAFVVALNQTCDGQEKRWYASTLELQLVSLEFCGACRHVPTLHVRVDRRTPRSLW 97
BLAST of mRNA_L-elsbetiae_contig6033.14573.1 vs. uniprot
Match: A0A6H5KNI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNI6_9PHAE) HSP 1 Score: 65.5 bits (158), Expect = 6.610e-9 Identity = 49/142 (34.51%), Postives = 67/142 (47.18%), Query Frame = 2 Query: 98 SSRCLDAFMVVLNERGDRWWKR-YTPTAELQLVSLQFCVAYRSISKIHLTVNTETPSCLWTNPAAAAAAAAVRGRVETRASKRPSSTRIPAVQLRTLTWEMPSWT----SGSSLFEKVECLKLGGEFRG-SIARVVWPPGLK 505 +S+CLDAF+V LN+ D KR Y T ELQLVSL+ C A R + +H+ V +TP LW + R+ K S+R+P VQ LTW +P S + + C + S+ VWP LK Sbjct: 6 NSKCLDAFVVALNQACDGQEKRWYVSTLELQLVSLEVCGACRRVQTLHVRVKPQTPPSLWFP-------SQNHTTTNNRSPKVCISSRVPVVQAFGLTWALPMGVLQQRSATEVRSGSGCRRANTHSSAASLESAVWPQRLK 140
BLAST of mRNA_L-elsbetiae_contig6033.14573.1 vs. uniprot
Match: A0A6H5JRF9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRF9_9PHAE) HSP 1 Score: 64.7 bits (156), Expect = 1.020e-8 Identity = 48/139 (34.53%), Postives = 69/139 (49.64%), Query Frame = 2 Query: 107 CLDAFMVVLNERGD-RWWKRYTPTAELQLVSLQFCVAYRSISKIHLTVNTETPSCLWTNPAAAAAAAAVRGRVETRASKRPSSTRIPAVQLRTLTWEMPSWTS-GSSLFEK--VECLKLGGEFRGSIARVVWPPGLKDL 511 CL+A +V LNE D + W YT T ELQL SL FC+A R+ +HL V+ + P L + A KR TR+P ++ R +TW MP+ + +F +E L+ G F S+ V WP L+ + Sbjct: 51 CLEALIVALNETCDGKSW--YTSTKELQLASLDFCIACRNCQTVHLNVDEQIPRRLLASADAPPPH-----------PKRLCWTRVPRLRSRRVTWNMPTAAKLRTPIFAMTDMEYLEFGDAFGDSLEAVPWPEHLRTM 176
BLAST of mRNA_L-elsbetiae_contig6033.14573.1 vs. uniprot
Match: A0A6H5KRT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRT6_9PHAE) HSP 1 Score: 63.9 bits (154), Expect = 1.410e-8 Identity = 35/62 (56.45%), Postives = 40/62 (64.52%), Query Frame = 2 Query: 89 MAQSSRCLDAFMVVLNERGDRWWKRYTPTAELQLVSLQFCVAYRSISKIHLTVNTETPSCLW 274 M SSRCLDAF+V LNE K T T LQL SLQFCVA RS S + L ++T+TP LW Sbjct: 1 MQGSSRCLDAFIVALNETCHEG-KCITSTTALQLASLQFCVACRSASPVRLRIDTDTPRYLW 61
BLAST of mRNA_L-elsbetiae_contig6033.14573.1 vs. uniprot
Match: D7G2S9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2S9_ECTSI) HSP 1 Score: 57.0 bits (136), Expect = 4.190e-6 Identity = 44/129 (34.11%), Postives = 59/129 (45.74%), Query Frame = 2 Query: 101 SRCLDAFMVVLNE--RGDRWWKRYTPTAELQLVSLQFCVAYRSISKIHLTVNTETPSCLWTNPAAAAAAAAVRGRVETRASKRPSS------TRIPAVQLRTLTWEMPSWTSGSS---LFEKVECLKLG 454 S CL+A ++ LNE G+ W YT T ELQL SL+FCVA R+ +HL V+ + P R+ RA P TR+P ++ R +TW M S V+CLK G Sbjct: 111 SSCLNALVIALNETCNGESW---YTSTKELQLASLEFCVACRNYQTLHLKVDAQIPR-----------------RLLARADAPPPHPELLCRTRVPRLRARRVTWGMRKAAELSIPIFAMTDVDCLKFG 219 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6033.14573.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6033.14573.1 >prot_L-elsbetiae_contig6033.14573.1 ID=prot_L-elsbetiae_contig6033.14573.1|Name=mRNA_L-elsbetiae_contig6033.14573.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=178bp MAQSSRCLDAFMVVLNERGDRWWKRYTPTAELQLVSLQFCVAYRSISKIHback to top mRNA from alignment at L-elsbetiae_contig6033:8780..11102- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6033.14573.1 ID=mRNA_L-elsbetiae_contig6033.14573.1|Name=mRNA_L-elsbetiae_contig6033.14573.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2323bp|location=Sequence derived from alignment at L-elsbetiae_contig6033:8780..11102- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6033:8780..11102- >mRNA_L-elsbetiae_contig6033.14573.1 ID=mRNA_L-elsbetiae_contig6033.14573.1|Name=mRNA_L-elsbetiae_contig6033.14573.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1068bp|location=Sequence derived from alignment at L-elsbetiae_contig6033:8780..11102- (Laminarionema elsbetiae ELsaHSoW15)back to top |