mRNA_L-elsbetiae_contig603.14566.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig603.14566.1 vs. uniprot
Match: D7G0H9_ECTSI (Ankyrin repeat domain protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0H9_ECTSI) HSP 1 Score: 386 bits (992), Expect = 1.340e-130 Identity = 227/362 (62.71%), Postives = 255/362 (70.44%), Query Frame = 1 Query: 1 MADRTHLHRAAQRGDIGAVRALVQAVDVNLRGGWRVESPLHAASRAGRSDVIACLVGAGAHTEVRDRNNDTXXXXXXXXXXXXXXXXXXXXXXRVDADGIPRSALHCACMQGHAGCVSELLRGGADETAEDEDGNTPAQVIGTMSESLERAEDVALIHEMIRRAPADRAWRRRGWLVLLRSRDCIAAGLLAASAXXXXXAVTTRSAARRGAGISDVDSGG-RFLAGP-TPPVPLEGQERSMGHDRQ--------SKKRFASTRGNREGQQVVAGGGHLCGDRKTPPKTSSAARGSSVSPKAKRKYSSKKGGRGSTKDRRGRVGRRAVDSEQDIENRRVMVALVSRLISLGEDGAFRCVLSFL 1056 MADRTHLHRAAQRGDIGAVRALVQAVDVNLRGGWRVESPLHAASRAG+ DVIACLVGAGAHTEVRDRNNDT RVDADGIPRSALHCACMQGHA CVSELLRGGADET EDEDGN+PAQVIGTMSESLERAED+ LI EM+RRAPADRAWRRRGWLV+LR+RDC+AAGLL SA VTTRSAARRGA + +D GG R +AG T P EGQ + GH R KK F + G + GGG R++P S+ GS P S+KK RG+ K R G+ GR +SE+++ R+ + +LV+RLI LGE+GAFRCVLSFL Sbjct: 1 MADRTHLHRAAQRGDIGAVRALVQAVDVNLRGGWRVESPLHAASRAGKPDVIACLVGAGAHTEVRDRNNDTPLLLAAWLGHATAIAKLLASGARVDADGIPRSALHCACMQGHAACVSELLRGGADETVEDEDGNSPAQVIGTMSESLERAEDIVLIREMLRRAPADRAWRRRGWLVMLRNRDCVAAGLLP-SARPPPTTVTTRSAARRGARVWAIDGGGSRSIAGAATSPGFFEGQGLTTGHIRNHHQLKVHGKKKSFGAPGVTVAGSR--GGGGKAPRSRRSPSAGGSSGSGSFCPPGKGHVSSNKKRPRGAAKRRVGKRGRGGAESEEELAGRQALASLVARLIGLGEEGAFRCVLSFL 359
BLAST of mRNA_L-elsbetiae_contig603.14566.1 vs. uniprot
Match: D7G6X8_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6X8_ECTSI) HSP 1 Score: 84.0 bits (206), Expect = 3.450e-14 Identity = 69/185 (37.30%), Postives = 90/185 (48.65%), Query Frame = 1 Query: 19 LHRAAQRGDIGAVRALVQ-AVDVNLR-GGWRVESPLHAASRAGRSDVIACLVGAGAHTEVRDRNNDTXXXXXXXXXXXXXXXXXXXXXXRVDADGIPRS-----ALHCACMQGHAGCVSELLRGGADETAEDEDGNTPAQVIGTMSESLE---RAEDVALIHEMIRRAPADRAWRRRGWLVLLRS 543 L AAQ+GD +RA++Q VDVN R G+ + LH A+ R I LV AGAH EV D ++ T ++A I A A QG V LLR GADETA + DG T A+V+G E +DV + +++ AP DRAWRRRG+LVL R+ Sbjct: 111 LDLAAQKGDACVLRAILQHGVDVNRRTDGY---TSLHVAALNNRVAAIDVLVEAGAHVEVEDDDDCTPFLDACINHCHEAALALYKHGSNIEARDIRGETPLIIAARQAGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHIEYAACPLNKQDVERVRDLLENAPVDRAWRRRGFLVLCRA 292
BLAST of mRNA_L-elsbetiae_contig603.14566.1 vs. uniprot
Match: D8LQN0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQN0_ECTSI) HSP 1 Score: 82.0 bits (201), Expect = 1.830e-13 Identity = 66/193 (34.20%), Postives = 87/193 (45.08%), Query Frame = 1 Query: 19 LHRAAQRGDIGAVRALVQA----VDVNLRGGWRVESPLHAASR-----AGRSDVIACLVGAGAHTEVRDRNNDTXXXXXXXXXXXXXXXXXXXXXXRVDADGIPRSA-----LHCACMQGHAGCVSELLRGGADETAEDEDGNTPAQVIGTMSES----LERAEDVALIHEMIRRAPADRAWRRRGWLVLLRS 543 L AA RG ++AL+ VD GW + LH + + D + L+GAGA V+ N+ A+ R+A LH AC + V LLR GADE + DG+TPA V+G + ++ ER D IH M+ RAPADR+WRRRGWLVL RS Sbjct: 249 LEIAAGRGHADVLKALLDKRSSEVDTANDLGW---AALHYVASFDETVRDKGDAVRVLLGAGADVNVKGTNDSCATPLHLAVNRWMTSTGTICALLEGGANINARTAGDDTPLHIACTRLRGSVVELLLRWGADEKLPNNDGDTPADVVGVLEQNDLDDEEREADNQRIHRMLARAPADRSWRRRGWLVLSRS 438
BLAST of mRNA_L-elsbetiae_contig603.14566.1 vs. uniprot
Match: A0A6H5KNU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNU3_9PHAE) HSP 1 Score: 81.6 bits (200), Expect = 2.260e-13 Identity = 67/182 (36.81%), Postives = 89/182 (48.90%), Query Frame = 1 Query: 28 AAQRGDIGAVRALVQ-AVDVNLR-GGWRVESPLHAASRAGRSDVIACLVGAGAHTEVRDRNNDTXXXXXXXXXXXXXXXXXXXXXXRVDADGIPRS-----ALHCACMQGHAGCVSELLRGGADETAEDEDGNTPAQVIGTMSESLE---RAEDVALIHEMIRRAPADRAWRRRGWLVLLRS 543 AAQ+GD +RA++Q VDVN R G+ + LH A+ R I LV AGAH EV D ++ T ++A + A A QG V LLR GADETA + DG T A+V+G E +D+ + +++ APADRAWRRRG LVL R+ Sbjct: 163 AAQKGDACVLRAILQHGVDVNRRTDGY---TSLHVAALNNRVAAIDVLVEAGAHVEVEDDDDCTPFLDACSNHCHEAALALFKHGANIEARDMRGETPLIIAARQAGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHIEYAACPLNKQDLERVRDLLENAPADRAWRRRGLLVLCRA 341
BLAST of mRNA_L-elsbetiae_contig603.14566.1 vs. uniprot
Match: D8LB27_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB27_ECTSI) HSP 1 Score: 78.6 bits (192), Expect = 2.530e-12 Identity = 46/90 (51.11%), Postives = 53/90 (58.89%), Query Frame = 1 Query: 286 DADGIPRSALHCACMQGHAGCVSELLRGGADETAEDEDGNTPAQVIGTMSESLERAEDVALIHEMIRR----APADRAWRRRGWLVLLRS 543 D G P LH ACM + V LLR GADET +++G+ PA VIG EDV H+ IRR APADR+WRRRGWLVL RS Sbjct: 349 DHSGTP---LHVACMHSNVAAVELLLRWGADETCSNDNGDVPADVIGVYDRGDVNDEDVKADHKRIRRMLARAPADRSWRRRGWLVLSRS 435
BLAST of mRNA_L-elsbetiae_contig603.14566.1 vs. uniprot
Match: D7FY50_ECTSI (Similar to ankyrin 2,3/unc44, partial n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY50_ECTSI) HSP 1 Score: 73.2 bits (178), Expect = 1.360e-10 Identity = 62/187 (33.16%), Postives = 82/187 (43.85%), Query Frame = 1 Query: 7 DRTHLHRAAQRG------DIGAVRALVQAVDVNLRGGWRVESPLHAASRAGRSDVIACLVGAGAHTEVRDRNNDTXXXXXXXXXXXXXXXXXXXXXXRVDADGIPRSALHCACMQGHAGCVSELLRGGADETAEDEDGNTPAQVIGTMSESLERAEDVA-LIHEMIRRAPADRAWRRRGWLVLLRSR 546 D + + A +RG +I A R V A+D R S L A+R G + + L+ AGA + ++ DT LH ACM CV LLR ADE +ED P V+G +R E+V I+EM+ RAPADR WRRRGWL +LR+R Sbjct: 204 DMSAVDLAVERGTTDVLLEILAARPHVDALDD------RGVSALGIAARKGHAKALDVLIDAGADVDEANQEMDTP--------------------------------LHLACMHLQPACVRTLLRHNADEVFRNEDLAFPDDVVGHAVAGDKRDEEVVEWIYEMLARAPADRVWRRRGWLAMLRAR 352
BLAST of mRNA_L-elsbetiae_contig603.14566.1 vs. uniprot
Match: D7FLL7_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLL7_ECTSI) HSP 1 Score: 72.8 bits (177), Expect = 1.960e-10 Identity = 71/193 (36.79%), Postives = 94/193 (48.70%), Query Frame = 1 Query: 13 THLHRAAQRGDIG--AVRALVQA-VDVNLR--GGWRVESPLHAASRAGRSDVIACLVGAGAHTEVRDRNNDTXXXXXXXXXXXXXXXXXXXXXXRVDADGIPRSALHCACMQ---GHAGCVSELLRGGADETAEDEDGNTPAQVIG-TMSESLERAED-VALIHEMIRRAPADRAWRRRGWLVLLRSRDCIAA 561 T LH A D AV LV+A D L+ GGW +PLHAA+ R + +A L+ A VR+R DA G + LH AC++ G A + LLR GADETA ++ G TP V+G T +++ + D V ++ RAP DR WRRRGWLV+LRSR + A Sbjct: 275 TALHTAILFSDRAGPAVHMLVKARADTELKSVGGW---TPLHAAAEHHRVNCVAALLQNNA--SVRNR---------------------------FDATG--DTPLHRACVEQREGLAASIDLLLRWGADETARNKRGRTPLDVLGATRTDNPHCSPDEVDRARLLLVRAPTDRRWRRRGWLVVLRSRTIVVA 433
BLAST of mRNA_L-elsbetiae_contig603.14566.1 vs. uniprot
Match: D8LD22_ECTSI (MHC_I C-terminus family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD22_ECTSI) HSP 1 Score: 68.9 bits (167), Expect = 3.870e-9 Identity = 41/84 (48.81%), Postives = 49/84 (58.33%), Query Frame = 1 Query: 304 RSALHCACMQGHAGCVSELLRGGADETAEDEDGNTPAQVIGTM----SESLERAEDVALIHEMIRRAPADRAWRRRGWLVLLRS 543 R+ LH AC V LLR GADE D+ TPA +IGT S+ + D IH+M+ RAPADR+WRRR WLVL RS Sbjct: 354 RTPLHEACTYSSVAAVELLLRWGADEKLTDDGDVTPADMIGTSGDVGSDHGDIEADGQRIHQMLARAPADRSWRRRSWLVLSRS 437
BLAST of mRNA_L-elsbetiae_contig603.14566.1 vs. uniprot
Match: D8LCR2_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCR2_ECTSI) HSP 1 Score: 67.4 bits (163), Expect = 8.790e-9 Identity = 57/163 (34.97%), Postives = 70/163 (42.94%), Query Frame = 1 Query: 112 SPLHAASRAGRSDVIACLVGAGAHTEVRDRN------------NDTXXXXXXXXXXXXXXXXXXXXXXRVDA---DGIPRSALHCACMQGH----AGCVSELLRGGADETAEDEDGNTPAQVIGTMSESLERAEDVALIHEMIRRAPADRAWRRRGWLVLLRS 543 S LH A R GRSDV+ L+ GA E R R +A D S LH CM A C LLR GADETA DED +TPA ++ + SE + +++ APADRAWRRRG LV+LR+ Sbjct: 196 SALHWAVRDGRSDVVDALIEVGADVEARTSRMISYYSDGGHCMKGMTPLHEAAYQGNYPGMLVLLQKGRANANAQDEHGHSPLHILCMNPQVCSAAACSDILLRSGADETATDEDRHTPADIMAS-SEGHN-----GWLQQLLANAPADRAWRRRGTLVMLRA 352
BLAST of mRNA_L-elsbetiae_contig603.14566.1 vs. uniprot
Match: D7FSI6_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSI6_ECTSI) HSP 1 Score: 67.0 bits (162), Expect = 1.190e-8 Identity = 59/191 (30.89%), Postives = 88/191 (46.07%), Query Frame = 1 Query: 28 AAQRGDIGAVRALVQ-AVDVNLRG----GWRVESPLHAASRAGRSDVIACLVGAGAHTEVRDRNNDTXXXXXXXXXXXXXXXXXXXXXXRVDAD--------GIPRSALHCACMQGHAGC---VSELLRGGADETAEDEDGNTPAQVIGTMS-ESLERAEDVALIHEMIRRAPADRAWRRRGWLVLLRSRD 549 A Q G +G ++A ++ VD + + GW + LH A+ +++ + L+ AGA +V R AD +P LH A + G V LLR GA ETA ++ GNTPA+V ++ + E+ A ++ RAPADRAWRRRGW+V+LR+R Sbjct: 174 ATQLGHVGVIKAFLEHGVDASSQACPASGW---TALHQAALDNQAEAVEVLLEAGADADVESLPGSPCYDTPLLAAAESMSNEALRVLLRNGADPNKPDDNGSMP---LHLAAHEQTPGVMEVVDLLLRWGASETAVNKHGNTPAEVFQRLAIHRPDATEERAGALVLLARAPADRAWRRRGWVVMLRARS 358 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig603.14566.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig603.14566.1 >prot_L-elsbetiae_contig603.14566.1 ID=prot_L-elsbetiae_contig603.14566.1|Name=mRNA_L-elsbetiae_contig603.14566.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=353bp MADRTHLHRAAQRGDIGAVRALVQAVDVNLRGGWRVESPLHAASRAGRSDback to top mRNA from alignment at L-elsbetiae_contig603:28482..29540- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig603.14566.1 ID=mRNA_L-elsbetiae_contig603.14566.1|Name=mRNA_L-elsbetiae_contig603.14566.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1059bp|location=Sequence derived from alignment at L-elsbetiae_contig603:28482..29540- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig603:28482..29540- >mRNA_L-elsbetiae_contig603.14566.1 ID=mRNA_L-elsbetiae_contig603.14566.1|Name=mRNA_L-elsbetiae_contig603.14566.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2118bp|location=Sequence derived from alignment at L-elsbetiae_contig603:28482..29540- (Laminarionema elsbetiae ELsaHSoW15)back to top |