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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 950 |
| Cds size | 561 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622816657.363502-UTR-L-elsbetiae_contig6024:755..993 | 1622816657.363502-UTR-L-elsbetiae_contig6024:755..993 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig6024 756..993 + |
| 1691683717.9392877-UTR-L-elsbetiae_contig6024:755..993 | 1691683717.9392877-UTR-L-elsbetiae_contig6024:755..993 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig6024 756..993 + |
| 1622816657.3961163-UTR-L-elsbetiae_contig6024:3357..3380 | 1622816657.3961163-UTR-L-elsbetiae_contig6024:3357..3380 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig6024 3358..3380 + |
| 1691683717.9660137-UTR-L-elsbetiae_contig6024:3357..3380 | 1691683717.9660137-UTR-L-elsbetiae_contig6024:3357..3380 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig6024 3358..3380 + |
| 1622816657.410424-UTR-L-elsbetiae_contig6024:3850..3978 | 1622816657.410424-UTR-L-elsbetiae_contig6024:3850..3978 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig6024 3851..3978 + |
| 1691683717.9764135-UTR-L-elsbetiae_contig6024:3850..3978 | 1691683717.9764135-UTR-L-elsbetiae_contig6024:3850..3978 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig6024 3851..3978 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622816657.3753042-CDS-L-elsbetiae_contig6024:993..1077 | 1622816657.3753042-CDS-L-elsbetiae_contig6024:993..1077 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6024 994..1077 + |
| 1691683717.9481742-CDS-L-elsbetiae_contig6024:993..1077 | 1691683717.9481742-CDS-L-elsbetiae_contig6024:993..1077 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6024 994..1077 + |
| 1622816657.3861694-CDS-L-elsbetiae_contig6024:2880..3357 | 1622816657.3861694-CDS-L-elsbetiae_contig6024:2880..3357 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6024 2881..3357 + |
| 1691683717.956762-CDS-L-elsbetiae_contig6024:2880..3357 | 1691683717.956762-CDS-L-elsbetiae_contig6024:2880..3357 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6024 2881..3357 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6024.14557.1 >prot_L-elsbetiae_contig6024.14557.1 ID=prot_L-elsbetiae_contig6024.14557.1|Name=mRNA_L-elsbetiae_contig6024.14557.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=187bp
MGCVMLFEFEREQWLAVHGEGDPSMTPTACIESCGAKDETLLPAVAMGGI
CVCVDFEEIDLSDVHAGATCDAPCRGDETLICGGSAAYDLYMQPALRRAV
SAVAAADDAIRGKSRSAGSGLVFRSQLDALVGGHLPELEGDDGWDYEGLD
DDDDEFDWDDDDDDDDEFDGDDDGDGDEDVCIWDGR* back to topmRNA from alignment at L-elsbetiae_contig6024:756..3978+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig6024.14557.1 ID=mRNA_L-elsbetiae_contig6024.14557.1|Name=mRNA_L-elsbetiae_contig6024.14557.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3223bp|location=Sequence derived from alignment at L-elsbetiae_contig6024:756..3978+ (Laminarionema elsbetiae ELsaHSoW15)
GCCGACAACCGTGTACGATGATGCTTCTGCACCAGCAGCACCCGTGCCTG
TCGCCGCCGCCGCCGTGCCGACAACCGTGTACGATGATGCTTCTGCACCA
GCAGCACCCGTGCCTGTCGCCGCCGCCGCCGTGCCGACAGCCGTGTACGA
TGATGCTTCTGCACCAGCAGCACCCGTACCTGCCGCCGCCACCGCCGCCG
CCGCCGCCGACAGCATCGGCGATGACGGGGTGCTGTACATGGGGTGCGTC
ATGCTCTTCGAGTTCGAGCGGGAGCAGTGGCTCGCCGTCCACGGAGAAGG
CGACCCTTCGATGACGCCAACGGTGAGTGAGAACAGAACCCTGGGATTTG
TTGCGCATCGGCTAAAAAAACGAGGCAACAGGCGGGGCACCGCAGGAGGG
GGTCCACCCCCCACCCTGACCCCGGTTCGGTCGTCTAGCTAGTCGTAGTG
GAGGAGGGGGGGGGGGGGGGGGGGGGGGGGAGACGGGGAAAAAGCCAAAA
ATTGGGGGGAAAAAAAAAAAAAACTTGACCCCCCCCCCCCCGGGGAGAAA
ANNNNNNNNNNAACAAGGGGGGCCAGGGGGGGGGGCCGGGGGGGGGGGGC
CCCCCCCCCCCCCGCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
GGGGGGGGGGGGGGGGGGGCAGTGGGGTAGACGGCGAATAAGCCAACAAT
TGGAGGGAAAACAAAACAAAACTTGACCCCCCCCTCCCCGGGTTGAAAAG
AGTATGGTATATCTCCACATCGAGCTTACAGTAGGAGTACGAACCACACA
CACACATACATATATCCTTCGTACATAATTTTATTTACCGATTTTCGGGA
AACGGATCTGACAGGTAGTACGCATCGATGAACTAACATTTTTATGGTAC
ATGTAATATCGAAATATTATCATCATACTTCGATTTAAGTATATAGGGAT
TTTGTGTTTTATAACATCAAGTATGATACAACATGTTCACGTGTGGGATG
GGTGACAGTGTTTTTTTTTATCTATCGACCAGCGATTGCGGGGGAGGACA
ACGAAATAGCAATATATCTGCGAGACCCCCGTTTGTCTGGCTGGCTCTAG
TAGGCTTGGAACAGGAGAGAACCATCTTAAGTTGATACCATACGTTTTTT
GGCTCAGCCCCAGCAGGAGGTTTCGGCGGGGGTTGCCAGTGCTGCACGCC
GGTTTAAGGGGGCGCCAGTCGGAAACACCCTTTTCGGCTGCTGTGCGGTC
CGGCGACGACACTATATACAGATCTAAGGCGCTGTGGCCGTAGAGTTCTG
CCTTTCCTGTCTAATGACACCTGATTTGTCAAGTTCCTCCCCCTATTGCC
CTTAAACCTGACGAAACAAACTTTCGCGGTTGTGCCGCAGATAGTACGCA
AAAAAAGTGCGGCGCAACCCCCCGTCGGATGGCGCGTGTATTTCCCCCGA
GCCCGAGAACGCGTCGCCGACAGCACAGATCCGCTTGAAACTTTGCGCAT
GAACTATATACACTATTATGAGTTCACACCCAAGGTGGTGCGTCCAAATA
CACACAGCAGTAGACGAGAGGGGCGTATTTCTCGTAAAAGTGGCGTTTGC
GCGACGGCGTAAGCTTAGCTTCCCCCTGAACGGTGTAGGAAGGGTGCACT
GGTATGTCAAGAGGGTATTTATTGTGAGGGTCTCTCAGCAGTTCGATTTT
TGCTGCAACACGCAGTATAGGCCGAGAACTCGCAATCGGCGCGAAGCAAG
TTTTGAATTTGCGCGGATATCGTATGCACTCTTCGTTCGATACAAAAAAA
AAAGACCCGGCGGAAAATACAAAAAAAAAAAGACCCGGCGGAAAATGCTG
TAAAGTCAAATATTGCTTCGCGCCGATCACGAGTTCTCGGCCTATATTGC
GTGTTGCAGCAAAATTACAAGGGCTGAACGACCCTCATAACACCTGCTTT
GATGAAGCGAGAGCCCCCAGCGGCGCTACTGCTGCCTTTCTCTTGTGTGT
TTGGGCGTCTGTCCACGGTACTACTGACTTACAACAATCGGCTTAATCTT
GACACGCTGCTCTCGCTGCTGCCGCTGCCGCTGCCGCTGCTGTGGGCTGT
CCGTGCTCCTTGGCATCAACCCCAGGCCTGCATCGAGTCCTGTGGCGCGA
AGGACGAGACCTTGCTACCCGCCGTCGCCATGGGAGGTATCTGTGTGTGC
GTCGACTTCGAAGAGATCGACCTCTCGGACGTTCACGCGGGGGCCACCTG
TGACGCGCCATGCCGCGGGGATGAGACCCTGATCTGCGGGGGCTCTGCGG
CCTATGACCTCTACATGCAGCCCGCTCTCCGACGGGCGGTTTCGGCCGTC
GCCGCCGCTGACGACGCTATCCGGGGCAAGAGTCGCTCCGCTGGTAGCGG
CCTCGTGTTCCGTAGCCAGCTGGATGCGCTGGTCGGCGGCCACCTGCCCG
AGTTGGAGGGGGACGACGGCTGGGACTACGAAGGCCTGGATGACGACGAC
GACGAGTTCGATTGGGACGACGATGACGACGACGACGACGAGTTCGATGG
GGATGACGACGGCGACGGCGACGAAGACGTCTGCATCTGGGATGGGAGGT
GAAGACTCTCGACATGAAGCCCGTGGTGAGTGCGGCGGCATGCGACGTTT
CTCGTATGTACGTAGCGGGGGGCACCTGTGCCAAAGGAGCCCAAAAGAGG
CTGGAAACACGAAACCCCTCACACCGTCCATGCGCACCTGACGACACGCG
ACACCCCCGATCACGAGCCGTGCGTGCGCCCTTGGGGCTGAATCATGCAA
AAAAAAACGAGACAGACGAGTTTGCCGTACCTACTTCGTTTTCAGGCTCC
GAACCTGAGTGATTGCGCGTACGCATAAAGGTGTGCTTTTTTTTGCACCG
TGCCTCTTTTGCGTGCAGCCGGAACGCCCTTCCTTCGATTGCAATCGCTC
CGAGAAGCCCGCCCGCCGAACGAACGGAGACGCCTCATCGAGCCTAGTTT
CACGCCCTATCTTATCTAATGCTCTTTTCCAGCCTTTGTTTTTCTCTCTA
AACTCATCCATGCAAAACTGTGTGCCGTCCTGATCTATTCCCCAGGCGGC
GTCGCTTGGGGGAGGGGTGTGTGTGTACATCACCGGTACGGCACCCCTTC
AGCATCGGCTGCTTTGGGGGAATCAATCCCCAAGCCGTCGAGAGACAACG
ACGGGTACTTTATTTTGTTTTAC back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig6024:756..3978+ >mRNA_L-elsbetiae_contig6024.14557.1 ID=mRNA_L-elsbetiae_contig6024.14557.1|Name=mRNA_L-elsbetiae_contig6024.14557.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1122bp|location=Sequence derived from alignment at L-elsbetiae_contig6024:756..3978+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGGGTGCGTCATGCTCTTCGAGTTCGAGCGGGAGCAGTGGCTCGCCGT
CCACGGAGAAGGCGACCCTTCGATGACGCCAACGATGGGGTGCGTCATGC
TCTTCGAGTTCGAGCGGGAGCAGTGGCTCGCCGTCCACGGAGAAGGCGAC
CCTTCGATGACGCCAACGGCCTGCATCGAGTCCTGTGGCGCGAAGGACGA
GACCTTGCTACCCGCCGTCGCCATGGGAGGTATCTGTGTGTGCGTCGACT
TCGAAGAGATCGACCTCTCGGACGTTCACGCGGGGGCCACCTGTGACGCG
CCATGCCGCGGGGATGAGACCCTGATCTGCGGGGGCTCTGCGGCCTATGA
CCTCTACATGCAGCCCGCTCTCCGACGGGCGGTTTCGGCCGTCGCCGCCG
CTGACGACGCTATCCGGGGCAAGAGTCGCTCCGCTGGTAGCGGCCTCGTG
TTCCGTAGCCAGCTGGATGCGCTGGTCGGCGGCCACCTGCCCGAGTTGGA
GGGGGACGACGGCTGGGACTACGAAGGCCTGGATGACGACGACGACGAGT
TCGATTGGGACGACGATGACGACGACGACGACGAGTTCGATGGGGATGAC
GACGGCGACGGCGACGAAGACGTCTGCATCTGGGATGGGAGGTGAGCCTG
CATCGAGTCCTGTGGCGCGAAGGACGAGACCTTGCTACCCGCCGTCGCCA
TGGGAGGTATCTGTGTGTGCGTCGACTTCGAAGAGATCGACCTCTCGGAC
GTTCACGCGGGGGCCACCTGTGACGCGCCATGCCGCGGGGATGAGACCCT
GATCTGCGGGGGCTCTGCGGCCTATGACCTCTACATGCAGCCCGCTCTCC
GACGGGCGGTTTCGGCCGTCGCCGCCGCTGACGACGCTATCCGGGGCAAG
AGTCGCTCCGCTGGTAGCGGCCTCGTGTTCCGTAGCCAGCTGGATGCGCT
GGTCGGCGGCCACCTGCCCGAGTTGGAGGGGGACGACGGCTGGGACTACG
AAGGCCTGGATGACGACGACGACGAGTTCGATTGGGACGACGATGACGAC
GACGACGACGAGTTCGATGGGGATGACGACGGCGACGGCGACGAAGACGT
CTGCATCTGGGATGGGAGGTGA back to top
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