mRNA_L-elsbetiae_contig6010.14541.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig6010.14541.1
Unique NamemRNA_L-elsbetiae_contig6010.14541.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig6010.14541.1 vs. uniprot
Match: D8LRF7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRF7_ECTSI)

HSP 1 Score: 450 bits (1158), Expect = 4.830e-151
Identity = 221/287 (77.00%), Postives = 246/287 (85.71%), Query Frame = 1
Query:    1 IHLEGQVSRDWNGESTTLFTAEAPFQPEVEPARVTVNATFVYCTQGEYWDGSV--CQSCADVGLNPQGLNCDGVGTLLETLPLESGYWRSAFTSTTIRECFNDDACVGSSESSGRITHPDDYCDTGYLGPYCAVCEGGYTTGVSHTCHSCDSSYWAGMVVIMALTGVVLVVGAVIILNDLVGNPALTDLSETHFSVMSRRLRTIPFHKLKIPLVVFQIMTQYASITSIEFPPVFQTFLSAISVINLELGWLFSSVCIIDVNFHGNLVATTIGPLLLLLVLFATYLYT 855
            I L G+VS  WNGESTT+FTAEAP Q EV+P   ++NA+FVYC  G+YW  S   C  CADV LNP+GL+CD  GTLLETLPL  GYWRS  TST IRECFNDDAC+GS E S RI+ P+DYCDTGY+GPYCAVC  GYTTGVSHTCHSCD SYWAGMVV+MALTGVVLVVG VI+LNDLVGNPALTDLSETHFSVMSRR+RTIPFHKLKIP VV QI+TQYASITSIEF PVFQTFLS ISVINL+LGW+ +SVCIIDVNF+GNL+A T+GPL++LLVL ATYLYT
Sbjct:  380 ISLNGEVSTYWNGESTTVFTAEAPHQEEVDPFATSINASFVYCNAGQYWVASETSCMMCADVALNPEGLSCDSEGTLLETLPLAEGYWRSTETSTNIRECFNDDACIGS-EVSQRISSPNDYCDTGYMGPYCAVCMDGYTTGVSHTCHSCDGSYWAGMVVVMALTGVVLVVGVVIVLNDLVGNPALTDLSETHFSVMSRRIRTIPFHKLKIPFVVLQIITQYASITSIEFAPVFQTFLSTISVINLDLGWVLTSVCIIDVNFYGNLIAATVGPLMVLLVLAATYLYT 665          
BLAST of mRNA_L-elsbetiae_contig6010.14541.1 vs. uniprot
Match: A0A6H5JU27_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU27_9PHAE)

HSP 1 Score: 291 bits (745), Expect = 1.300e-88
Identity = 160/221 (72.40%), Postives = 178/221 (80.54%), Query Frame = 1
Query:  466 MVVIMALTGVVLVVGAVIILNDLVGNPALTDLSETHFSVMSRRLRTIPFHKLKIPLVVFQIMTQYASITSIEFPPVFQTFLSAISVINLELGWLFSSVCIIDVNFHGNLVATTIGPLLLLLVLFATYLYTCKKHGLEPQPREVDDQASYPMSSMGMPSMNYHHGPAAAGASTSLSPRSSSEDGTSAEPAGSVIRRVQDKYATFALTMAFLLYSTVSTVIFQ 1128
            MVV+MALTGVVLVVG VI+LNDLVGNPALTDLSETHFSVMSR++RT+PFHKLKIP VV QIMTQYASITSIEF P+FQTFLS ISVINL+LGW+ +S+CIIDVNF+GNL+A T+GPL+ LLVL  TYLYTCKKH LEP+PRE DDQA YPMSS                     SP +SSE+ T AEP   V+RRVQDKY T ALTMAF LYSTVSTVIFQ
Sbjct:    1 MVVVMALTGVVLVVGVVIVLNDLVGNPALTDLSETHFSVMSRKIRTMPFHKLKIPFVVLQIMTQYASITSIEFAPMFQTFLSTISVINLDLGWVLTSLCIIDVNFYGNLLAATVGPLMALLVLAVTYLYTCKKHRLEPRPREADDQAIYPMSSF------------------RTSPNTSSENDT-AEPYQGVMRRVQDKYTTVALTMAFFLYSTVSTVIFQ 202          
BLAST of mRNA_L-elsbetiae_contig6010.14541.1 vs. uniprot
Match: D8LRF9_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRF9_ECTSI)

HSP 1 Score: 238 bits (607), Expect = 2.280e-66
Identity = 141/379 (37.20%), Postives = 212/379 (55.94%), Query Frame = 1
Query:    1 IHLEGQVSRDWNGESTTLFTAEAPFQPEVEPARVTVNATFVYCTQGEYWDGSVCQSCADVGLNPQGLNCDGVGTLLETLPLESGYWRSAFTSTTIRECFNDDACVGSSESSGRITHPDDYCDTGYLGPYCAVCEGGYTTGVSHTCHSCDSSYWAGMVVIMALTGVVLVVGAVIILNDLVGNPALTD-LSETHFSVMSRRLRTIPFHKLKIPLVVFQIMTQYASITSIEFPPVFQTFLSAISVINLELGWLFSSVCIIDVNFHGNLVATTIGPLLLLLVLFATYLYTCKKHGLEPQPREVDDQASYPMSSMGMPSMNYHHGPAAAGASTSLSPRSSSEDGTSAEPAG--SVIRRVQDKYATFALTMAFLLYSTVSTVIFQ 1128
            + + G ++ D+NG +  LF AE+  +     A   VN TF YC QGEY+    C  C+D+ L+ +GL+CD  G L  TLP+ SGYWRS+  +TTIR+C  ++AC G S     I+  DDYC  GY GPYCAVC  GY  G+S+ CH C  ++ A M V+  L G++ +  A ++   L+  P           S M  +++ +P HKLKIP+VVFQI+TQYA IT+++FPP F   L  + V+NL++GW+ S+ CI   NF+G LV TT+ P+ L L L  T++Y   +      P+  +  +   ++++                  ++   S S  G     A   SV++R   ++    +T +FL+YSTVST++FQ
Sbjct: 1016 VAITGSLTSDFNGPTQALFKAES--RQSGNTALAMVNTTFYYCQQGEYFSDDECLLCSDLELDGEGLDCDEPGVLQLTLPVASGYWRSSDDTTTIRKCLYEEACEGGS----AISQSDDYCAVGYQGPYCAVCLSGYAGGISNGCHECTEAFRAWMYVLAVLGGLLALACAWLLFRYLIQEPVSPGRFLSCRNSRMVSKVKELPLHKLKIPIVVFQILTQYADITTVDFPPAFTKLLGFMDVLNLDMGWVLSASCIFSPNFYGRLVLTTLVPIALGLALCCTFMYAKSRTVRAGLPKANEGSSMRSVNTVVSXXXXXXXXXXXXXXPATVVAGSRSGHGIMMSEARQMSVVKR---RHVGVLVTASFLVYSTVSTIVFQ 1385          
BLAST of mRNA_L-elsbetiae_contig6010.14541.1 vs. uniprot
Match: D7FHV0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHV0_ECTSI)

HSP 1 Score: 216 bits (550), Expect = 1.930e-65
Identity = 113/148 (76.35%), Postives = 128/148 (86.49%), Query Frame = 1
Query:  412 TTGVSHTCHSCDSSYWAGMVVIMALTGVVLVVGAVIILNDLVGNPALTDLSETHFSVMSRRLRTIPFHKLKIPLVVFQIMTQYASITSIEFPPVFQTFLSAISVINLELGWLFSSVCIIDVNFHGNLVATTIGPLLLLLVLFATYLYT 855
            TT V +       S ++  VV+MALTGVVLVVG VI+LNDLVGNPALTDLSETHFSVMSRR+RTIPFHKLKIP VV QI+TQYASITSIEF PVFQTFLS ISVINL+LGW+ +SVCIIDVNF+GNL+A T+GPL++LLVL ATYLYT
Sbjct:   73 TTFVGNVAGERGGSLYSSTVVVMALTGVVLVVGVVIVLNDLVGNPALTDLSETHFSVMSRRIRTIPFHKLKIPFVVLQIITQYASITSIEFAPVFQTFLSTISVINLDLGWVLTSVCIIDVNFYGNLIAATVGPLMVLLVLAATYLYT 220          
BLAST of mRNA_L-elsbetiae_contig6010.14541.1 vs. uniprot
Match: A0A6H5JU65_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU65_9PHAE)

HSP 1 Score: 235 bits (600), Expect = 2.010e-65
Identity = 140/380 (36.84%), Postives = 217/380 (57.11%), Query Frame = 1
Query:    7 LEGQVSRDWNGESTTLFTAEAPFQPEVEPARVTVNATFVYCTQGEYWDGSVCQSCADVGLNPQGLNCDGVGTLLETLPLESGYWRSAFTSTTIRECFNDDACVGSSESSGRITHPDDYCDTGYLGPYCAVCEGGYTTGVSHTCHSCDSSYWAGMVVIMALTGVVLVVGAVIILNDLVGNPALTDLSETHF-----SVMSRRLRTIPFHKLKIPLVVFQIMTQYASITSIEFPPVFQTFLSAISVINLELGWLFSSVCIIDVNFHGNLVATTIGPLLLLLVLFATYLYTCKKHGLEPQPREVDDQASYPMSSM-GMPSMNYHHGPAAAGASTSLSPRSSSEDGTSAEPAGSVIRRVQDKYATFALTMAFLLYSTVSTVIFQ 1128
            + G ++ D+NG +  LF AE+  +     A   VN TF YC +GEY++   C  C+D+ L+ +GL+CD  G L  TLP+ SGYWRS+  +TTIR+C  ++AC G +     I+  DDYC  GY GPYCAVC  GY  G+S+ CH C  ++ AGM ++  L G++ +  A ++L  L+  P    +S   F     S M  +++ +P HKLKIP+VVFQI+TQYA IT+++FPP +   L  + V+NL++GW+ S+ CI   NF+G LV TT+ P++  L L  T++Y   +      P+  +  +   ++++              A A+     R+      S     SV++R   ++    +T +FL+YSTVST++FQ
Sbjct: 1314 ITGSLTSDFNGPTHALFKAES--RQSGNTALAMVNTTFYYCLEGEYFNDEECLLCSDLELDGEGLDCDEPGVLQSTLPVASGYWRSSADTTTIRQCLYEEACKGGTV----ISQSDDYCAVGYQGPYCAVCLSGYAGGISNGCHECTEAFRAGMYLLAVLGGLLAMACAWLLLRYLIQEP----VSPGRFLSCGNSRMVSKVKELPVHKLKIPIVVFQILTQYADITTVDFPPAYTKLLGFMDVLNLDMGWVLSASCIFSPNFYGRLVLTTLVPIVFGLALCCTFMYAKSRSVRVGLPKANEGSSIRSINTVVSXXXXXXXXXXXXAPATVFTGTRNGHGMIMSEARQMSVVKR---RHVGVLVTASFLVYSTVSTIVFQ 1680          
BLAST of mRNA_L-elsbetiae_contig6010.14541.1 vs. uniprot
Match: A0A836CF88_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF88_9STRA)

HSP 1 Score: 156 bits (394), Expect = 3.520e-38
Identity = 93/262 (35.50%), Postives = 133/262 (50.76%), Query Frame = 1
Query:   85 VEPARVTVNATFVYCTQGEYWDG--SVCQSCADVGLNPQGLNCDGVGTLLETLPLESGYWRSAFTSTTIRECFNDDACVGSSESSGRITHPDDYCDTGYLGPYCAVCEGGYTTGVSHTCHSCDSSYWAGMVVIMALTGVVL----VVGAVIILNDLVGNPALTDLSETH--FSVMSRRLRTIPFHKLKIPLVVFQIMTQYASITSIEFPPVFQTFLSAISVINLELGWLFSSVCIIDVNFHGNLVATTIGPLLLLLVLFATY 846
            V  A  TV++T  YC  G YWD    VC +C D+     GL C   G  L  LP++ G+W        +  C +D  C+G     G        C  G  GPYC++CE G+  G+ + CH+C +S  A                  VG V++L       A+ D+ +     S   R  R + + K KIPLV FQI++Q+  IT IE+PPV   FL+A++V+NL LGW  S+ C+++VNF+  L+  T+ PL +  VL ATY
Sbjct:  426 VTVASATVHSTHWYCRAGLYWDKLQGVCMACGDLPGGASGLRCSAPGATLSYLPVQPGFWVPPDAPLRVLACRSDKVCIG-----GNGLDTSTLCHEGNTGPYCSLCEDGFAPGMYNVCHACTNSSKATAAAXXXXXXXXXXXXAAVGLVVLLGLTSHFAAVNDVWDCSGMVSTFVRIAREMDWGKFKIPLVAFQIISQFPQITGIEYPPVLARFLAALNVLNLNLGWWLSATCLLEVNFYQQLLLATLTPLCVTAVLVATY 682          
BLAST of mRNA_L-elsbetiae_contig6010.14541.1 vs. uniprot
Match: D7G3S0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3S0_ECTSI)

HSP 1 Score: 152 bits (384), Expect = 8.550e-37
Identity = 94/242 (38.84%), Postives = 140/242 (57.85%), Query Frame = 1
Query:  148 DGSVCQSCADVGLNPQGLNCDGVGTLLETLPLESGYWRSAFTSTTIRECFNDDACVGSSESSGRITHPDDYCDTGYLGPYCAVCEGGYTTGVSHTCHSCDSSYWAGMVVIMALTGVVLVVGAVIILNDLVGNPALTDLSETHFSVMSRR-LRTIPFHKLKIPLVVFQIMTQYASITSIEFPPVFQTFLSAISVINLELGWLFSSVCI-IDVNFHGNLVATTIGPLLLLLVLFATYLYTCKKH 867
            DG++  +C +V L     + DG+   LETL L+ GYWR+   S  I  C+N DAC G     G+ T  D +C +GY GPYCAVCE  Y++ ++HTC  C SS   G+ VI A+  +V V+    +   ++     T+  E  F    RR L  +P   LKI +VV+QI+TQ+A   ++ FP ++Q FLSAI VIN ++G + ++ C+  D++FH  L+  TIGPL++   L  TY    ++H
Sbjct: 1156 DGTITPTC-EVPLEHTSADEDGL--TLETLKLDEGYWRATTESVIILACYNADACAG-----GK-TGADSFCASGYQGPYCAVCETDYSSSLAHTCKHCSSSRRRGLTVIAAIAVIVTVLAFAAVFQYMLS----TEHEEGIFGCFRRRVLGAVPVESLKIIVVVWQILTQFADAANVTFPGLYQDFLSAIDVINFDIGSVLAAGCLWSDMDFHDRLLVNTIGPLVVAGFLAMTYGIVIRRH 1384          
BLAST of mRNA_L-elsbetiae_contig6010.14541.1 vs. uniprot
Match: A0A835YZ05_9STRA (UCH domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ05_9STRA)

HSP 1 Score: 150 bits (378), Expect = 4.970e-36
Identity = 88/252 (34.92%), Postives = 138/252 (54.76%), Query Frame = 1
Query:  127 CTQGEYW-----DGSV-CQSCADVGLNPQGLNCDGVGTLLETLPLESGYWRSAFTSTTIRECFNDDACVGSSESSGRITHPDDYCDTGYLGPYCAVCEGGYTTGVSHTCHSCDSSYWAGMVVIMALTGVVLVVGAVIILNDLVGNPALTDLSE----THFSVMSRRLRTIPFHKLKIPLVVFQIMTQYASITSIEFPPVFQTFLSAISVINLELGWLFSSVCIIDVNFHGNLVATTIGPLLLLLVLFATYLY 852
            C  G+Y      DG+  C++C   GL      C G+G  + TLPL+SGYWR       IR+C+N DAC+GS+ ++      DDYC  GY GPYC VC   Y   V + C  C ++  A  +  +A   +V++  A +++  +      TD S+    T+ S    R   +   +L++P+VV Q++TQY SIT  + P  +  FL+ +S+ +L+L WL S  C ++VNF+  L+  T+ PL ++ ++FA  LY
Sbjct:  422 CGNGQYIGAGAVDGTFGCKACDSTGLA-----CTGIGATIATLPLDSGYWRETLMQELIRKCWNSDACIGSAAAASV----DDYCAAGYEGPYCTVCSADYAALVGYRCVECTTTSVAIALSAIAAIAIVVMFLAWVLVRAVGEAHTATDGSDRVEATNTSSRVARTLLVLMRRLRVPIVVLQVLTQYVSITGGDLPLSYTHFLNGVSIFSLDLRWLTSPGCAMNVNFYDRLLMATLSPLAIIALIFAGRLY 664          
BLAST of mRNA_L-elsbetiae_contig6010.14541.1 vs. uniprot
Match: A0A6H5K0E9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0E9_9PHAE)

HSP 1 Score: 149 bits (375), Expect = 1.270e-35
Identity = 79/256 (30.86%), Postives = 135/256 (52.73%), Query Frame = 1
Query:  127 CTQGEYWDGSVCQSCADVGLNPQGLNCDGVGTLLETLPLESGYWRSAFTSTTIRECFNDDACVGSSESSGRITHPDDYCDTGYLGPYCAVCEGGYTTGVSHTCHSCDSSYWAGMVVIMALTGVVLVVGAVIILNDLVGNPALTDLSETHFSVMSRRLRTIPFHKLKIPLVVFQIMTQYASITSIEFPPVFQTFLSAISVINLELGWLFSSVCIIDVNFHGNLVATTIGPLLLLLVLFATYLYTCKKHGLEPQPREV 894
            C    + +GS+   C +V  +      DG    L+TL ++ G+WR++ +ST +  C++ DAC+G       +T    YC+ GY GPYC +C  GYT  +S  C  C  +   G+ V + L  +++ +   ++     G   +         ++    R IP   LKI +V +QI+TQ+ S+ ++ +P V+Q  L  + V N +L WL S+ C++D+NFHG L+ +TI P++ LL+L  TY    + +  EP+   +
Sbjct: 1021 CDGCVFAEGSLAPICTEVMDHS---TSDGGNVTLQTLSIDRGFWRASTSSTEVLACYHADACLGG------VTGASGYCEEGYEGPYCGICSDGYTEQLSFACSKCSENSAGGIAVAVVLALLIVFLAVAVVSYVTSGEVGMGRKG----GIVELVTRYIPLQSLKIVIVSWQILTQFTSVANVTYPDVYQDLLDVLDVFNFDLSWLLSAGCVVDMNFHGRLLVSTISPIVALLLLACTYAAAARINRGEPEKLNI 1263          
BLAST of mRNA_L-elsbetiae_contig6010.14541.1 vs. uniprot
Match: A0A835YVC3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVC3_9STRA)

HSP 1 Score: 148 bits (374), Expect = 1.350e-35
Identity = 87/252 (34.52%), Postives = 137/252 (54.37%), Query Frame = 1
Query:  127 CTQGEYW-----DGSV-CQSCADVGLNPQGLNCDGVGTLLETLPLESGYWRSAFTSTTIRECFNDDACVGSSESSGRITHPDDYCDTGYLGPYCAVCEGGYTTGVSHTCHSCDSSYWAGMVVIMALTGVVLVVGAVIILNDLVGNPALTDLSE----THFSVMSRRLRTIPFHKLKIPLVVFQIMTQYASITSIEFPPVFQTFLSAISVINLELGWLFSSVCIIDVNFHGNLVATTIGPLLLLLVLFATYLY 852
            C  G+Y      DG+  C++C   GL      C G+G  + TLPL+SGYWR       IR+C+N DAC+G + ++      DDYC  GY GPYC VC   Y   V + C  C ++  A  +  +A   +V++  A +++  +      TD S+    T+ S    R   +   +L++P+VV Q++TQY SIT  + P  +  FL+ +S+ +L+L WL S  C ++VNF+  L+  T+ PL ++ ++FA  LY
Sbjct:  174 CGNGQYIGAGAVDGTFGCKACDSTGLA-----CTGIGATIATLPLDSGYWRETLMQELIRKCWNSDACIGGAAAASV----DDYCAAGYEGPYCTVCSADYAALVGYRCVECTTTSVAIALSAIAAIAIVVMFLAWVLVRAVGEAHTATDGSDRVEATNTSSRVARTLLVLMRRLRVPIVVLQVLTQYVSITGGDLPLSYTHFLNGVSIFSLDLRWLTSPGCAMNVNFYDRLLMATLSPLAIIALIFAGRLY 416          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6010.14541.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRF7_ECTSI4.830e-15177.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JU27_9PHAE1.300e-8872.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LRF9_ECTSI2.280e-6637.20Polymorphic outer membrane protein n=1 Tax=Ectocar... [more]
D7FHV0_ECTSI1.930e-6576.35Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JU65_9PHAE2.010e-6536.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CF88_9STRA3.520e-3835.50Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7G3S0_ECTSI8.550e-3738.84Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YZ05_9STRA4.970e-3634.92UCH domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A6H5K0E9_9PHAE1.270e-3530.86Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YVC3_9STRA1.350e-3534.52Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6010contigL-elsbetiae_contig6010:889..10613 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score235.3
Seed ortholog evalue4.5e-59
Seed eggNOG ortholog2880.D8LRF9
Hectar predicted targeting categoryother localisation
EggNOG OGs2BFIX@1,2S176@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionhypothetical protein, putative
Ec32 orthologEc-00_000520.1
Exons8
Model size1128
Cds size1128
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6010.14541.1prot_L-elsbetiae_contig6010.14541.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig6010 889..10613 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816655.491051-CDS-L-elsbetiae_contig6010:888..11591622816655.491051-CDS-L-elsbetiae_contig6010:888..1159Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6010 889..1159 -
1691683716.4869854-CDS-L-elsbetiae_contig6010:888..11591691683716.4869854-CDS-L-elsbetiae_contig6010:888..1159Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6010 889..1159 -
1622816655.503073-CDS-L-elsbetiae_contig6010:2942..30281622816655.503073-CDS-L-elsbetiae_contig6010:2942..3028Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6010 2943..3028 -
1691683716.5024278-CDS-L-elsbetiae_contig6010:2942..30281691683716.5024278-CDS-L-elsbetiae_contig6010:2942..3028Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6010 2943..3028 -
1622816655.5145555-CDS-L-elsbetiae_contig6010:3856..39821622816655.5145555-CDS-L-elsbetiae_contig6010:3856..3982Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6010 3857..3982 -
1691683716.513495-CDS-L-elsbetiae_contig6010:3856..39821691683716.513495-CDS-L-elsbetiae_contig6010:3856..3982Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6010 3857..3982 -
1622816655.5261266-CDS-L-elsbetiae_contig6010:5239..54161622816655.5261266-CDS-L-elsbetiae_contig6010:5239..5416Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6010 5240..5416 -
1691683716.521739-CDS-L-elsbetiae_contig6010:5239..54161691683716.521739-CDS-L-elsbetiae_contig6010:5239..5416Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6010 5240..5416 -
1622816655.539789-CDS-L-elsbetiae_contig6010:6433..65161622816655.539789-CDS-L-elsbetiae_contig6010:6433..6516Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6010 6434..6516 -
1691683716.5301828-CDS-L-elsbetiae_contig6010:6433..65161691683716.5301828-CDS-L-elsbetiae_contig6010:6433..6516Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6010 6434..6516 -
1622816655.5502126-CDS-L-elsbetiae_contig6010:7121..72271622816655.5502126-CDS-L-elsbetiae_contig6010:7121..7227Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6010 7122..7227 -
1691683716.5386863-CDS-L-elsbetiae_contig6010:7121..72271691683716.5386863-CDS-L-elsbetiae_contig6010:7121..7227Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6010 7122..7227 -
1622816655.5665088-CDS-L-elsbetiae_contig6010:8160..83041622816655.5665088-CDS-L-elsbetiae_contig6010:8160..8304Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6010 8161..8304 -
1691683716.5468779-CDS-L-elsbetiae_contig6010:8160..83041691683716.5468779-CDS-L-elsbetiae_contig6010:8160..8304Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6010 8161..8304 -
1622816655.5769606-CDS-L-elsbetiae_contig6010:10478..106131622816655.5769606-CDS-L-elsbetiae_contig6010:10478..10613Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6010 10479..10613 -
1691683716.5553246-CDS-L-elsbetiae_contig6010:10478..106131691683716.5553246-CDS-L-elsbetiae_contig6010:10478..10613Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6010 10479..10613 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig6010.14541.1

>prot_L-elsbetiae_contig6010.14541.1 ID=prot_L-elsbetiae_contig6010.14541.1|Name=mRNA_L-elsbetiae_contig6010.14541.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=376bp
IHLEGQVSRDWNGESTTLFTAEAPFQPEVEPARVTVNATFVYCTQGEYWD
GSVCQSCADVGLNPQGLNCDGVGTLLETLPLESGYWRSAFTSTTIRECFN
DDACVGSSESSGRITHPDDYCDTGYLGPYCAVCEGGYTTGVSHTCHSCDS
SYWAGMVVIMALTGVVLVVGAVIILNDLVGNPALTDLSETHFSVMSRRLR
TIPFHKLKIPLVVFQIMTQYASITSIEFPPVFQTFLSAISVINLELGWLF
SSVCIIDVNFHGNLVATTIGPLLLLLVLFATYLYTCKKHGLEPQPREVDD
QASYPMSSMGMPSMNYHHGPAAAGASTSLSPRSSSEDGTSAEPAGSVIRR
VQDKYATFALTMAFLLYSTVSTVIFQ
back to top

mRNA from alignment at L-elsbetiae_contig6010:889..10613-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig6010.14541.1 ID=mRNA_L-elsbetiae_contig6010.14541.1|Name=mRNA_L-elsbetiae_contig6010.14541.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=9725bp|location=Sequence derived from alignment at L-elsbetiae_contig6010:889..10613- (Laminarionema elsbetiae ELsaHSoW15)
ATTCACCTCGAGGGCCAGGTTTCGAGGGACTGGAACGGCGAAAGCACGAC GCTTTTTACGGCAGAGGCGCCTTTCCAGCCAGAAGTTGAACCAGCTAGGG TAACCGTCAATGCGACCTTCGTCTATTGCACGCAGGTGAGTGTTGTTATC TGTTGTTGTTGTTGTTGCGAATCTCGTGGTGATGCCCTTTTACAGAGTTA TTGTATGTGGTGGCGCGTTTCTCGCCAGCATATACTTCTATGTAGGAGTA TGTATTACTCTTGAGTATTGATAGTAAAGACATTCGAGTAGGTGTGCTGT GTACATGCTACTTCATGCAGCGCCTGAAACGCTCTCTTCTCCTGCGTTTT ACCAGCGTGAGAGACGAGCTGCCCCGAGACGCTCTGACTCTGTGCTGCTT TTACATGTAGCATCGTCCCTCCCTCTTTGTCAGCCGTAAAGGAACGTCGA TTCACGGGACCGCTGAGGTCCCCCTCTGCTCGTTTCGTACAGCATGATAT TATCTTGTTCGCCGTTTGGTGCACAGGTGGTACGGCGGCTGTCGCTGCCA CAATGACATCGATTTTTGCCTTGTCAGCGATGAAATCCCGACATAAACCT ATGTAGGCCGCTCCCGAGAGAGATCCTCTAAACCTTATTCATGATAAATA TCGATGAGTTCCAAACCCTGTTGTTTCTGTTTATTCACATTAAAAACCGT TCCGATCTCTCCACCCAGTACCTCCCTACGGGCGTACTATTCCAACACTT GGTGCGGTCAATTCCCGTGGTCACAGCGCGCTCGCTGTACAGCAACATCT GTCTGTACTTCCGAGTCGTTTTGTGTGTGGTTGTGCACCGTCGGTGAAGG AGGCGCCCTCCACGCCACCCCGGTCGATTTTTTCCGCGCAGCGCGCAGGA TAATCCGAACTAACGCTTCTCAAGCCATTTAGACTTCTCCAAGCGCGATC ACAAGCGCTCGAGTTGTTTTTGTTTTATAGGCTTCGTGCAATAAGGGATG CTCGGCCGCCCGTGATCACCCCCTACGTTGATGAGCCTCGCAGGAGGAGG GGCGGATACCTGATCTGCCGGAGACGACATCTTGTCTTCGAGATTGGCGA TTCTGTCTGACATACCCTGAAGATTCATCCCCATGACACCCTCAAGGGAG GATATCGCGGTGAATAATAGAACCCCCTAATTCTCAAAAAGAGCTATGGG GCGGGGTATTTATCTAGGAACAGCCCTTGACTAGATCTTTCCAACGCCAC CCCTTCCGGCACTGTCACCCTCTTCGTTACGGAGTAATGCAGCTCTAAAA TTCGTTCCGGGGGGTGTGGTATCTTGTGTCACCTACGGTAGAGTGGAACA TCCCCCACGGCTCCTTTTGAGAATTGAGGGCTCTATGCAAGAAGCCTATC CTGTGCATTGTACCCGAAATAGCGAACAAAACAAAACGAAACAGAACGAA ACGAAGACACGCCTCCTCAACCTGCGTGTGTGACAATTGGAGGGCGCCCC TGTGTCTCTGCTCTGCCCAAAAAAACACAGCCAGCCACGTGGCAACAGGG CTATATAATAGAGTACTGGCGCAGCGCGCAGCATATCCAACTAACGGTTC TGAAGCCGTTTAGACTTCTCTGCAAGCACGATCGCAAGCACTCGAGCTGC TTTTGTTTTATGTATTCCGTGCATTGTAGTGTATTTCTATTTAGCCGAAA TAGCGAACAAAACAAGGCAAAAACGAAACGAAAACACGCCTCCTCAACCT GCTTGTGTATTGATTAGAGGGCGTCCTGTCTCCGCCCAAAAAAAAACACC AACAGGGCGAGAGTACTGGCGCAGCACGCAGCGTATCTATGTATGTAGCG CTCCTCGAGCGAGGTTTTACAAGCATACCGTAGGTGACACAAGATACCAC ACCCCCTGGACCAACGTTTAGAGCCCTGTTACTCCGTAGGTATAGCAGAT ATTTCCAACGCCGCCCCCCTTTCGGCACTGACGCTTTTCTTGCTGAGGAG GAACAGAGCTTTGAAAGCCTGTCCAGGGTGTGTGTGGTATCTTGTGTCAC CCACGGTATGTGAGCTGCATCTGAACAGCGTAGGTTGTCTTCCGTGTACA TATTGATTCGACGGCACTGCGGCGTCTCTGCCAAAAAAACACACACACAA CATAGGTATGTAGAAGGTATGCTGTTTATGTAATGATGCTGAACGTTTTT TTTTTCGTTTTTCGTTATTTTTCTGTGTATGGTACATACATACCTATGTA TATTGATTCGACGGCGCCGCGGTGTCTCCACTTTCCAAAAAACAAAAAAC TTGTAACAGGGCGAGTACTGGGACGGGAGCGTGTGCCAGAGCTGCGCGGA TGTGGGTCTCAACCCGCAAGGCCTGAACTGTGACGGCGTGGGGACCCTGC TGGAGACGCTGCCGCTCGAGTCCGGTTACTGGCGCTCCGCCTTCACTTCC ACGGTTAGCAGCTCTTGTTCTTTTTCTTGTGGCTCTCTGATGGTGGATTT TGTTTCCCGTGTGACACCTTTGTTGCCTGTCTGGCTCTCTGGTGGCAAAT CTGTCCTATATGGTACCTTTGTTAGCTGTCTGGCTCCCCGATATAAATCT GTCCTCTGATACATGACACCTTTGTTGCCCATCTGGCTCCCTGATAATAA ATCTGTCCTATATGATATCTTTGTCCTCTCTCTGGCTTGCTGATAATGAA TCTGTCCGATATGATACCTTTGTCAGCTGTCTGGCCCCCTGACAATAAAT CTGTCCTGTATGACACCCTTGTTAGCTGTCTGGCTCCCTGATAATAAATC TGTCCTATATGACACACCTTTGTTGCCCGTCTGGCTCCCTGATAATAAAT CTGTCCTCTATGACACACCTTCGTTATTTAGCTGTCTGGCTCTCTGGAGA TGGATTTGTTTGACTCTCTGACGGAGGGATTTTGTCCTGGACTGCTGTTG TACAAAGGACATCTCCGTTAGCGCACATTGTCGACGGAAATTGCATCGAA TAGAGGACAGGTGGATGAACGGGTATGAGCCACAGCCTTTGGCGGATAAA AAACACCTCCCAAGACGTAAGAGTCTGCGGGCTTCAGGTAGTCAGCACGC GCGATTTTGCGGCGCCCCTTGTCGCTGCCGCAACCCCCGGCGGCTCGGTC GTACCCCACCCCGTGCTCTGGTGTATTCGGCTGCTCTTGGCTTTGCTGGC CGCACCCGCGTTTAGGATACTTTGTTACGGATCGAAGACGCGCGTGCCCG TATCAAGTAGGGTTAGCGCGTTGTTGTGTTTTGTCATCCGTGATTGCAAA CCCTATAGTGTATCGTTCTTTGTTTTCCACCTCTAAATCATGGCATACAT ACCTCCTACGATGATGCTGCGGCATGTCTTTTGCAGACTATCCGGGAGTG CTTCAACGACGACGCCTGCGTGGGGAGCAGCGAGTCTTCGGGGCGCATCA CGCATCCTGACGACTACTGCGACACGGGTTACTTGGGGCCCTGTAAGTTT TAGTGACCGGTCCCGATATTGTCAGTCGTTGTGCACTTGTTGATGTGAGA GACGAGTCCCCTTCTTCCTTTTCCCCCCCACACACGTGGCTGCAGCCAAA CACGGGGCGGGGTGTAGCATGATGCCACGTGTCTCCATGGCTTTGTGTGT GCACCTCATGTCTCATCTCAGGTAACCTAATGTCCCTCGAAATACGGTTT CGGGTGGCTGGTTGCCGTATTTTTCAGGGAGCATATAAAGTCCTCTCTGC ATCTACTTCGAAGTAAATCTGTCTTTTTTTTATCTGCGGCCCTGAACGGC AGTTTTCCATGCCTTTTTCGGTTTGTACTCCCTTCCTACATCGTTGAAAT AAAAACCAAATCACGTCATGAAATGGTGCGCTCGCTGATCTGCGACGAAA GTAGGTTGTTGAGACTGCTGTTTCCCCACAAGCTGGGAATTTCCCGAAAG TGCTCGTTGTCGCTGGCGGACTGCTGTCTGTCGCCTGGGCGTGTGCGTCG CTTTTTTTTTTTTTGGCTCGCTCGCCTTGCCTAACTCTCCTCTCCGCTTT CCGCGTGTGCGCGCGTTCGCATCGGCATGCCGTGCGTGGCATGGCAGACT GCGCCGTGTGCGAAGGCGGCTACACGACGGGGGTGAGCCACACGTGCCAC TCCTGCGACAGCAGCTACTGGGCTGGCATGGTGAGGGGAAAAAGGCATGC AGACACAAGCCGCACGTTTGTTTCAGTTTTGTTCCGGGGGGTGTCCTTGT TTCCCTGTCTCTTACGCAGAGAGAGAGAGGGGAGACAGACAGACACACAG ACACACACACACACACACACACAGAGAGAGAGAGAGAGAGAGAGAGAGGT GCAGGGTGTTGATGAGGATTAGGGCCGGAGGAGGTAGGCACCCTTGTGTA GCTGACGCTGCCCGGCCAGTCGATAACTTGTGCCGGCGTTACTTGCGATG CCCCCCCTCGTTTTGGCACGTACATATGTATGTATGTAGTCGCCGAAATC GGGCCCCCGGTTGGTCGACAGCGCGCGAGCTGGATCTTATGCCCTAAATT ATGTATCGCCGGAGAAAGAACCTACCTCGGCCGCACCAGCGTCACACACA TCACTACTGTTGTCCGCGTACACAACGGAACTGTTGGTTAGTTCACCACG AAGCCCCTCCCGCCTCTCCAAATGTGAGATACTGTTGTAGATCCTTCCTT TGATTTCCTGATTAATTTTCGAAAAATCTTGAGGGGGCTGTTTTTTTTGT TGTTGTCCTGCCGACGACGCCATACTGCTGTGGAGGAAGGGATTAGACCT CTCACCCCCACGAGGTAAAAAGTTAGGTAACCAAATGTGTGTTTACTTAC CTGGCTGATTCGTTTAGCTCATTAGTTTGTTTCTTTTTTTCAGTATAGTA ATATACCCTTTTTAGTTTTTAGGGTAAGTTTTCCTGTGACCACGGGAATC GACTGCGTCAGTGTTGAATTAGTACGGAGATATGGAGGTATTGGAGAGAG AGAGAGAGAGAGAGAGAGATTGGAGCGGTTTTTAATGTGAAGACGACAAC GACAACGACGGCAACAGGCTGATGATATGTATGCTGAAATATGTATGTAC ATGTTAATAACACTTATCGCGGCTGCCGTCCGTCGTCGTCGTCGTCTTTT TCTTTTTTTTTGGCCGCGACCGCCGCCGCCGCCGCCGCCTCGAAAAGGTG GTGATCATGGCGCTGACGGGCGTGGTGTTGGTTGTGGGCGCGGTGATCAT CCTGAACGACCTGGTCGGCAACCCGGCCCTCACCGACCTCAGCGAGACGC ACTTCTCCGTCATGTCCAGGCGGCTGCGCACGATCCCCTTCCACAAGCTC AAGATTCCGCTCGTCGTCTTCCAGGTGTGCTGAAGAAGAGAAGAAGAAAA TGGATGTACAACGGTAGTAGGTCTTGCATGCGGAAGAGTCTGGGAACGGT CTTTACAGCAGTTCTATATAGTATGCGGAAGAGTTTGGGAACTTTCTGCT CTTGATGTAGACATGTGGGACCAAGATGCAGACCGCCTTTTTTGGTCTTT GAAGTGGTTGTAACAGAGTTCTGGAAAAAATTGGGAACTTTCTAGGACCA GGGAGACTTTACGCCCGTGGGTCATCGGGGTGATTTTTCAGCCCTTAGAG AGGTTTGGGAGATTTCCTAGTATATATATAGTACCGGTCTTCATGCATAA TGCATGAGCATTTCATACATAGTGCATGAGCATGTTATTTTCGCGACCCG TTTCTTGTCGTCATTTTGAGTGTGGGATAAAAACAGTGGCACGGCAGTGA ATGCGTTCCGCCGCGGTTCAGTGATGTACATGCACATGCCACATACTCTG TTTCCGAGTCTCCCTCCACCTATTATCCTTTATCCTTTTTCCCGCGCACT GCTTGCTGTGCATATTTTTTTTCCCGCTCGCTTGTCCATCCGGTTTGGCA GTTGTACCGCAGGGTCGTCCTTATAGAACGAAACGAGCCCTTGCTATATT GTTGTTTTTTTGTCGTGGTTTCTCCTTGTTGGAGCGGCTGCGTGTTTAAC GCCGGTGTTCTCTGTCGTTCGTTCCCTCTCGGGTGTGTTGGTTGGATCGT TCGTTATGTTACGAAAAACAACAGTTAATCAACAATGGAACCTAACCCAC ACTGAGACGGGATTCCGTGAGATTCAATCGATATTCCATATATGTACTGA CGTAATATTGGGCCGGCCAATCACACAGAAAAACACCTAAATACATATAC GGAGAAATTCACCATCTTTGTTAATTTACTTACTTGGCACCATGACATTT ACAACATGGAGGTGATTTCTGTCCTCTTCTCGTGTCTCTAATTATGTGTG TATCTGATAACGTTGACCTGCGCGCCCATCAGTTTGACGAGTGCAACACC AACCTCGTCTGTCTGTCTGTCTTTTGTGTCAGCGCTCTCATGTCGTCCGT CTGTGCACATGTGTGCGTGCGCCAAATCTATCGTGTGGCTTCCCTGCTAA CGCATCTCACCGCGCACCCCCCCCCCCCCCCCCCCCCCGGATTTTTCTCA CTGCGGATCGCCCCCCCTACCCCCCCCATCCCCATGATGTGCGTTATCCT GCTTGGTTGATCCTTTCTCTATTTTGCCTAGATCATGACGCAGTATGCTT CCATCACATCGATAGAATTCCCGCCGGTGTTCCAGACGTTCTTGTCCGCC ATCAGCGTCATCAACCTCGAGCTCGGGTGGTTGTTCTCGTCCGTGTGCAT CATCGATGTGAGTTTTGGTAACATATGGCTGGGTGGATGTGTCGATCGTT CATCGAATGCGAGTTTTGACATAATTGGGTGCGTGGCTTGGTGTCGACTG CTTCATCAATGGCGAGTTTGATTGGGTGTTATTTCGTCTGCATCATCGAT GTGAGCTTTGATATACTCGATGGCTGGGCGGCTGTGTCGATTCGTCCATC GGTGTGAGGTTTGGTATATGATTGGGCGAAGTTCTCGTTGGTGATGTAGG ATAGCATCGATGTTGTGAGAGTTAATATGACTGATGTTTCGATTGGTTAA TTCAGTACGCTGTGTGTGTCTGTCTACGTTTGTTTTCGTCCCATCTAATA TGGCGTCGTCTGCTTTCGATATACTTAGGCATTTTGGGTGTGTTTCTGTA CAACTAGACTACTTACCAGCCGGGGTTGCGCAGGGGGGGTTCACCACCGA AGCATTTTTTTTCTTTTTTTCGGGAAGTGCTTCTGTCAAGGTACTTCCTG TCCTCTCCAACAACGTAACGTAGGTGACACAAGATACCACCCCCCCCCTG GACCCGACTTTTAGAGCTCTGTTACTCCGTTACGAAGAGGGCGCCCAGCA CCAAACGACACATGTTCGACTAGATGGATCTTTCCAATGCCACCCCTTTT CGGCACTGGCACTCTTGTTGCTGGGGAAGAATCGAGCTTTGAAAATATGT CCAGGGGGGGGTGGTATCTTGTGTAACCTACGGTACGGTAGTCTTGTTTC TAGCGGTGGTGGTAATGTCGCTGCTGCTTTCTGGTTGCCTCTTTTCTCTG CTGCTGCTGCTGCTGGCTTGTGTTGTCATTCCCAGGTAAACTTCCACGGG AATCTAGTCGCGACAACCATTGGGCCGCTGTTGCTCCTACTCGTGCTTTT CGCCACATACCTCTACACTTGGTGAGTGAGCCTTGCTTTTGCGCCACGCC CTGTCAGCAGCATTGGTGCGGCTGATTTGAGAGCACTGTGCCGACTACTA CTGCTGTACCTTTGGCCTTCCCATCCGTGACTGCATACTACTGTCAGCAG CATTGGTGCGGCTGATTTTAGGGTATTGTGCCGACTACTACCACTGTACC TTTCGCCCTCCCATCCGTCACTGTTACTAAATACTGTGTCAGCAGCATTG GTGCGGCTGATTTTAGGGTATTGTGCCGACTACTACTACTGTATCTTTCG CCCTCCCATCCGTCACTGCATACTACTGTCAGCATGGTTTGAGGGTATTG TGGCGACTACTACTACTGTACCTTTCGCCCTCCCATCCGTCACTGTATAC TACTGTTGGCAGCATTGGTGTGGCTGGTTTGAGGGTACTGTGCCGGCTAC TGCTGTACCTTTCGGGACCACCTTCGCGAAAAATTCCTGTCTACATCGGG AAATAATAGAGGTAGTCTACGCAGGTTTTTATTCGGCGAAACACATGGGA TAAAGTATGGAATCGGGGAATGTTTGGGGGGTCGATGGTTAGGGTTAGGG TTACGGAACCCGTACTACCCTATTTCACATATAAAGCAATATTCCCCGTT TTTTCTCGCGAGGGCAGTCCAATAATAGACAGGGGTTCCGTAACCCTAAC CCAACCCTAACCCCAAACCGACCCCCCATTATCCGTTTCCATACTTGTTA TCGCATGTGATATTATATTCCAATAAAACCTGCAAAGGTTACTGACCTTT TGCCCCACCAGTCCAGTCATCAGTCGGTACTGCTGGTCGACATTGTCTCT TGTGTGGTTTCATCGTTCATCGCACGTGGATGGAATGAATTCCGGGTTGC GTGGACCCCCTTGGTGCCGATTACATACCAGTGTGACCACGGCGGTTCAG TACTCTTGCAAGATGCCCTCGTGGCAAGGAGCCAGCCCATCAAGCGCTGA AAATAGAAGTGAAAGCAAAAACGCCAGAGTGCTTGAAAGTCATGCGGGGC AGCTCCGGGTGGTGTCTATTTAGCAGCCGTATGAAACGCATGTGTCAAGG GTTTGTCAGTCATGAGAAACGCAACCCATTTCGGCGAGCTCGTATGATAC ATATGTTGTTGAGCCGAGCTTTTCTTGCTTGGCTCTTTTTGTGCCACCCG AACGAGGGCGTTCTCATTTCCACCACGACCCACCACAAATATGTACCACC CGTTTTTATCTTCCATTTATCTTTCACCCTAGATTTTCTGATGCACTTCG GCAGTAGATGCGACCGTGCAACACATTTTGTTCACGTGTGTATTGAGACC CGATCCCACCGTGCGCCCGTCCGTGCAGATCCAAGAAACTCGTCATTTTT ATTTTTCCTTTTTGGCAAGAAAGTCAGTTGTTTTTTATTTTTTCTTAGAA ATAGGCAAGACTATGACTAATTTACATCAGCAAAACAAGATATTTATCAA GGACGGGATCTCCCCACATTTAAGACACGAGACTGGGGACTGCTGTGTGG AAATATATGGGAAGTTGTAAGTTTCATGTTGTAGATACATACGTACCTAT AGCACACAACAAAAACTACATACCTCACCGTCCCAGGCTTTTACAGTAGG CACAATACCTGTCATCCGTAAACTTCTACTCGGTATGTACATGCGTACTC AAAATGGTTCGCTGTTTTTTTTGTTTTCGCATCAGCACTCATCTCTTCTT CGCCCCCCCTCCCCCCCCCGCCCGCGCCCCCGATTTTTCGATTTTCTCCT TCAGCAAGAAGCACGGGCTGGAGCCGCAGCCTCGAGAGGTAGACGACCAG GCGAGCTACCCGATGTCGAGCATGGGCATGCCCAGCATGAACTACCACCA CGGCCCTGCTGCCGCCGGCGCGTCTACGTCCCTCTCCCCCCGCTCTTCCT CGGAGGACGGCACGAGCGCGGAGCCCGCGGGCAGCGTGATCCGCAGGGTG CAGGACAAGTACGCCACATTCGCCCTGACGATGGCGTTTCTTCTCTACTC GACGGTTTCAACGGTCATCTTCCAG
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig6010:889..10613-

>mRNA_L-elsbetiae_contig6010.14541.1 ID=mRNA_L-elsbetiae_contig6010.14541.1|Name=mRNA_L-elsbetiae_contig6010.14541.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2256bp|location=Sequence derived from alignment at L-elsbetiae_contig6010:889..10613- (Laminarionema elsbetiae ELsaHSoW15)
ATTCACCTCGAGGGCCAGGTTTCGAGGGACTGGAACGGCGAAAGCACGAC
GCTTTTTACGGCAGAGGCGCCTTTCCAGCCAGAAGTTGAACCAGCTAGGG
TAACCGTCAATGCGACCTTCGTCTATTGCACGCAGATTCACCTCGAGGGC
CAGGTTTCGAGGGACTGGAACGGCGAAAGCACGACGCTTTTTACGGCAGA
GGCGCCTTTCCAGCCAGAAGTTGAACCAGCTAGGGTAACCGTCAATGCGA
CCTTCGTCTATTGCACGCAGGGCGAGTACTGGGACGGGAGCGTGTGCCAG
AGCTGCGCGGATGTGGGTCTCAACCCGCAAGGCCTGAACTGTGACGGCGT
GGGGACCCTGCTGGAGACGCTGCCGCTCGAGTCCGGTTACTGGCGCTCCG
CCTTCACTTCCACGGGCGAGTACTGGGACGGGAGCGTGTGCCAGAGCTGC
GCGGATGTGGGTCTCAACCCGCAAGGCCTGAACTGTGACGGCGTGGGGAC
CCTGCTGGAGACGCTGCCGCTCGAGTCCGGTTACTGGCGCTCCGCCTTCA
CTTCCACGACTATCCGGGAGTGCTTCAACGACGACGCCTGCGTGGGGAGC
AGCGAGTCTTCGGGGCGCATCACGCATCCTGACGACTACTGCGACACGGG
TTACTTGGGGCCCTACTATCCGGGAGTGCTTCAACGACGACGCCTGCGTG
GGGAGCAGCGAGTCTTCGGGGCGCATCACGCATCCTGACGACTACTGCGA
CACGGGTTACTTGGGGCCCTACTGCGCCGTGTGCGAAGGCGGCTACACGA
CGGGGGTGAGCCACACGTGCCACTCCTGCGACAGCAGCTACTGGGCTGGC
ATGACTGCGCCGTGTGCGAAGGCGGCTACACGACGGGGGTGAGCCACACG
TGCCACTCCTGCGACAGCAGCTACTGGGCTGGCATGGTGGTGATCATGGC
GCTGACGGGCGTGGTGTTGGTTGTGGGCGCGGTGATCATCCTGAACGACC
TGGTCGGCAACCCGGCCCTCACCGACCTCAGCGAGACGCACTTCTCCGTC
ATGTCCAGGCGGCTGCGCACGATCCCCTTCCACAAGCTCAAGATTCCGCT
CGTCGTCTTCCAGGTGGTGATCATGGCGCTGACGGGCGTGGTGTTGGTTG
TGGGCGCGGTGATCATCCTGAACGACCTGGTCGGCAACCCGGCCCTCACC
GACCTCAGCGAGACGCACTTCTCCGTCATGTCCAGGCGGCTGCGCACGAT
CCCCTTCCACAAGCTCAAGATTCCGCTCGTCGTCTTCCAGATCATGACGC
AGTATGCTTCCATCACATCGATAGAATTCCCGCCGGTGTTCCAGACGTTC
TTGTCCGCCATCAGCGTCATCAACCTCGAGCTCGGGTGGTTGTTCTCGTC
CGTGTGCATCATCGATATCATGACGCAGTATGCTTCCATCACATCGATAG
AATTCCCGCCGGTGTTCCAGACGTTCTTGTCCGCCATCAGCGTCATCAAC
CTCGAGCTCGGGTGGTTGTTCTCGTCCGTGTGCATCATCGATGTAAACTT
CCACGGGAATCTAGTCGCGACAACCATTGGGCCGCTGTTGCTCCTACTCG
TGCTTTTCGCCACATACCTCTACACTTGGTAAACTTCCACGGGAATCTAG
TCGCGACAACCATTGGGCCGCTGTTGCTCCTACTCGTGCTTTTCGCCACA
TACCTCTACACTTGCAAGAAGCACGGGCTGGAGCCGCAGCCTCGAGAGGT
AGACGACCAGGCGAGCTACCCGATGTCGAGCATGGGCATGCCCAGCATGA
ACTACCACCACGGCCCTGCTGCCGCCGGCGCGTCTACGTCCCTCTCCCCC
CGCTCTTCCTCGGAGGACGGCACGAGCGCGGAGCCCGCGGGCAGCGTGAT
CCGCAGGGTGCAGGACAAGTACGCCACATTCGCCCTGACGATGGCGTTTC
TTCTCTACTCGACGGTTTCAACGGTCATCTTCCAGCAAGAAGCACGGGCT
GGAGCCGCAGCCTCGAGAGGTAGACGACCAGGCGAGCTACCCGATGTCGA
GCATGGGCATGCCCAGCATGAACTACCACCACGGCCCTGCTGCCGCCGGC
GCGTCTACGTCCCTCTCCCCCCGCTCTTCCTCGGAGGACGGCACGAGCGC
GGAGCCCGCGGGCAGCGTGATCCGCAGGGTGCAGGACAAGTACGCCACAT
TCGCCCTGACGATGGCGTTTCTTCTCTACTCGACGGTTTCAACGGTCATC
TTCCAG
back to top