mRNA_L-elsbetiae_contig601.14539.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig601.14539.1 vs. uniprot
Match: D7FHC9_ECTSI (Vesicle transport protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHC9_ECTSI) HSP 1 Score: 305 bits (782), Expect = 2.790e-100 Identity = 154/196 (78.57%), Postives = 171/196 (87.24%), Query Frame = 1 Query: 535 MAEPTPGKWYNFGGRAAEEPPA--QANRFPSLPNVNIPGFRREQEPTLANEMCEMCPSLTFQQRLIGFGICLVAGYMLSFLSTISIATGDLGSFALIYCLGSLIAISATAFLIGPRRQCGKMFHKKRRIAATLYLVLLVAVIVLAFIGAPVLIILLVLILQMCAAVWYTASYIPYGRAMIKNTLCPCLKDMENQDG 1116 M+E T GKW+N GG A+ PA Q++RFPS+PNVNIPGFRREQEPTLANEMCEMCPSLTFQQR+ GF CL GY+LSFLST+ + +GDL SFALIYCLGSLIAI AT+FLIGPRRQCGKMFHKKRRIA +YLVLL AVI+LAF+G P IILLVLI+QMCAAVWYTASYIPYGRAMIK TLCPCLKD+ENQDG Sbjct: 1 MSETTAGKWFNLGGGGADSQPASSQSSRFPSMPNVNIPGFRREQEPTLANEMCEMCPSLTFQQRVGGFVACLALGYLLSFLSTVMLWSGDLSSFALIYCLGSLIAIGATSFLIGPRRQCGKMFHKKRRIACVIYLVLLFAVIILAFLGTPAGIILLVLIVQMCAAVWYTASYIPYGRAMIKGTLCPCLKDLENQDG 196
BLAST of mRNA_L-elsbetiae_contig601.14539.1 vs. uniprot
Match: A0A835YKD4_9STRA (Vesicle transport protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKD4_9STRA) HSP 1 Score: 156 bits (395), Expect = 1.780e-42 Identity = 84/165 (50.91%), Postives = 113/165 (68.48%), Query Frame = 1 Query: 625 PNVNIPGFRREQEPTL----ANEMCEMCPSLTFQQRLIGFGICLVAGYMLSFLSTISIATGD---LGSFALIYCLGSLIAISATAFLIGPRRQCGKMFHKKRRIAATLYLVLLVAVIVLAFIGAPVLIILLVLILQMCAAVWYTASYIPYGRAMIKNTLCPCLKD 1098 P++++PGFR A++MC CP+LT+QQR+IGF ++ GY+LSF+ T+ + G + FA++Y LG+LIA+S T FLIGP+ C KMFHK RR AA YLV+L+ V + A GA V I+L++L++Q AAVWYTASYIPYGR MI NT C KD Sbjct: 5 PDISVPGFRNTAPANEGGFNADDMCACCPTLTYQQRVIGFVTTMIVGYILSFVGTLLLIGGGPAGIRGFAVLYVLGNLIALSGTGFLIGPKSHCKKMFHKNRRFAAIFYLVMLLVVFIAAVAGAFVAIVLVLLVIQCIAAVWYTASYIPYGRTMIINTFCGPCKD 169
BLAST of mRNA_L-elsbetiae_contig601.14539.1 vs. uniprot
Match: A0A8J2WZP9_9STRA (Vesicle transport protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WZP9_9STRA) HSP 1 Score: 144 bits (362), Expect = 1.220e-37 Identity = 81/155 (52.26%), Postives = 103/155 (66.45%), Query Frame = 1 Query: 619 SLPNVNIPGFRREQEPTLANEMCEMCPSLTFQQRLIGFGICLVAGYMLSFLSTISIATGD-----LGSFALIYCLGSLIAISATAFLIGPRRQCGKMFHKKRRIAATLYLVLLVAVIVLAFIGAPVLIILLVLILQMCAAVWYTASYIPYGRAMI 1068 SLP + P F Q PT +EMC MCPS+T+QQRLIGF IC GY LSF+ T+ + + D + +FA++Y G+ IAI+AT FLIGPRRQC KMF K RR A +L++LV L G V +LL L +Q+CA +WY+ASYIPYGR MI Sbjct: 2 SLPTIQNP-FAPAQ-PTFEDEMCSMCPSMTYQQRLIGFCICCGCGYALSFMGTLMLLSKDPWKKRVTNFAILYVFGNFIAIAATGFLIGPRRQCKKMFSKTRRFACIFWLLMLVVTFALGLSGVDVGWVLLALFIQVCAGIWYSASYIPYGRRMI 154
BLAST of mRNA_L-elsbetiae_contig601.14539.1 vs. uniprot
Match: W7TZX0_9STRA (Vesicle transport protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TZX0_9STRA) HSP 1 Score: 130 bits (326), Expect = 2.140e-31 Identity = 74/169 (43.79%), Postives = 112/169 (66.27%), Query Frame = 1 Query: 607 NRFPSLPNVNIPGFRREQEPTLANEMCEMCPSLTFQQRLIGFGICLVAGYMLSFLSTISIA--TGD-LGSFALIYCLGSLIAISATAFLIGPRRQCGKMFHKKRRIAATLYLVLLVAVIVLAFIGAPVLIILLVLILQMCAAVWYTASYIPYGRAMI----KNTLC-PC 1089 N ++ N+ +PG QE ++ E+C MCPSLT+QQR+IGF C GY+LSF+ T+S+ T D + +FA +Y +G++IA+ +T FL+GP+ QC KMF K RR + LY+++L+ V +A V ++L +LI+Q+ AVWYT SY+P+GR + +NTL PC Sbjct: 14 NTMKAIQNM-LPGA---QEESVTEEVCAMCPSLTYQQRMIGFVGCFCLGYLLSFIGTLSLISMTADGIRNFAALYVVGNIIALCSTGFLVGPKSQCKKMFDKTRRYSTILYIIMLIVVFAVALARQNVFLVLFLLIIQVLVAVWYTLSYVPFGRQAVVGCMQNTLFKPC 178
BLAST of mRNA_L-elsbetiae_contig601.14539.1 vs. uniprot
Match: A0A1V9ZRH9_9STRA (Vesicle transport protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZRH9_9STRA) HSP 1 Score: 125 bits (315), Expect = 9.010e-31 Identity = 72/171 (42.11%), Postives = 110/171 (64.33%), Query Frame = 1 Query: 598 AQANRFPSLPNVNIPGFRREQEPTLANEMCEMCPSLTFQQRLIGFGICLVAGYMLSFLSTISIATG--DLGSFALIYCLGSLIAISATAFLIGPRRQCGKMFHKKRRIAATLYLVLLVAVIVLAFIGAPV-LIILLVLILQMCAAVWYTASYIPYGRAMIKNTLCPCLKDM 1101 A ++ ++ N+ +PG + ++ C C LT +QR+ GFG C V GY++SF+ST ++ +G D F ++Y LG++IA+ + FL+GP +Q M RRIAA LY++++V V+V+A + + L+ILL++I+Q CAAVWY+ASYIPYGR MIK C K M Sbjct: 11 ASSSAVTAVANIKVPGTTAS-DSSMEEASCG-CQKLTKKQRMYGFGTCFVLGYIISFVSTFALISGSRDGAKFGILYSLGNVIALCGSGFLVGPAQQIKLMMKPVRRIAAALYVLMIVLVLVVAILAPHLGLLILLLVIIQFCAAVWYSASYIPYGRKMIKTLGSKCFKSM 179
BLAST of mRNA_L-elsbetiae_contig601.14539.1 vs. uniprot
Match: F0Y4B6_AURAN (Vesicle transport protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y4B6_AURAN) HSP 1 Score: 125 bits (314), Expect = 1.060e-30 Identity = 69/163 (42.33%), Postives = 104/163 (63.80%), Query Frame = 1 Query: 658 QEPTLANEMCEMCPSLTFQQRLIGFGICLVAGYMLSFLSTISIATGD-----LGSFALIYCLGSLIAISATAFLIGPRRQCGKMFHKKRRIAATLYLVLLVAVIVLAFIGAPVLIILLVLILQMCAAVWYTASYIPYGRAMI----KNTLC--------PCLK 1095 QE + +E C+ CP LT+QQR+IGF C GY+LSF+ T+ +A G + +FA +Y +G+ IAI+AT FL+GPR QC KMF K RR + +L+ L+ +A G V ++++++ +Q+ A++WY+ASYIPYGR MI ++T C PC+K Sbjct: 9 QEQSFEDEACDGCPKLTYQQRIIGFCACCGFGYLLSFMGTMMLAVGGPDAETIRNFATLYIVGNFIAIAATLFLLGPRSQCKKMFDKTRRFSTIFWLLTLIVTFAVAVAGVNVGVVVMLIFVQIGASIWYSASYIPYGRRMIVKIFQSTCCSPCPQVCDPCIK 171
BLAST of mRNA_L-elsbetiae_contig601.14539.1 vs. uniprot
Match: A0A8J2WH84_9STRA (Vesicle transport protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WH84_9STRA) HSP 1 Score: 120 bits (301), Expect = 2.880e-28 Identity = 70/158 (44.30%), Postives = 103/158 (65.19%), Query Frame = 1 Query: 658 QEPTLANEMCEMCPSLTFQQRLIGFGICLVAGYMLSFLSTISIATG----DLGSFALIYCLGSLIAISATAFLIGPRRQCGKMFHKKRRIAATLYLVLLVAVIVLAFIGAPVLIILLVLILQMCAAVWYTASYIPYGRAMI----KNTL---CPCLKD 1098 +E T+ ++CEMCP++TF+QRLI C V GY+L T+++ G ++ F+++Y G+LIAI ATAF +GP+ C KM++ RR A +YLV LV V+VLA + V I+LL+L +++ AVWY+ASY+P GR + KNTL CP + D Sbjct: 56 EEQTIEEQVCEMCPTMTFKQRLIALICCCVLGYILEICGTLTLIGGPTARNIRKFSVLYVCGNLIAIMATAFWVGPKLMCKKMWNSTRRGATAMYLVSLVLVLVLALLHVAVFIVLLMLAVELFCAVWYSASYVPKGRWCVVQCCKNTLFSPCPEVLD 213
BLAST of mRNA_L-elsbetiae_contig601.14539.1 vs. uniprot
Match: A0A067CMW0_SAPPC (Vesicle transport protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CMW0_SAPPC) HSP 1 Score: 113 bits (282), Expect = 2.000e-26 Identity = 63/139 (45.32%), Postives = 94/139 (67.63%), Query Frame = 1 Query: 694 CPSLTFQQRLIGFGICLVAGYMLSFLSTISIATGDLGS--FALIYCLGSLIAISATAFLIGPRRQCGKMFHKKRRIAATLYLVLLVAVIVLAFIGAPV-LIILLVLILQMCAAVWYTASYIPYGRAMIKNTLCPCLKDM 1101 C LT +QR+IGFGIC GY++SF+ST ++ G F ++Y LG++IA+ + FL+GP +Q M RRIAA +Y+ ++V V+VLA + + L+IL+++++Q AAVWY+ASYIPYGR MI + C+K M Sbjct: 8 CQKLTKKQRMIGFGICFGLGYVISFISTFALLAGSRNGAKFGILYSLGNIIALCGSGFLVGPAQQVKLMMKPVRRIAAAIYVSMIVLVLVLAILAPHLGLLILILVMIQFGAAVWYSASYIPYGRKMITSLGSKCMKSM 146
BLAST of mRNA_L-elsbetiae_contig601.14539.1 vs. uniprot
Match: A0A7S4HST6_9STRA (Vesicle transport protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HST6_9STRA) HSP 1 Score: 112 bits (281), Expect = 8.140e-26 Identity = 54/151 (35.76%), Postives = 98/151 (64.90%), Query Frame = 1 Query: 649 RREQEPTLANEMCEMCPSLTFQQRLIGFGICLVAGYMLSFLST---ISIATGDLGSFALIYCLGSLIAISATAFLIGPRRQCGKMFHKKRRIAATLYLVLLVAVIVLAFI----GAPVLIILLVLILQMCAAVWYTASYIPYGRAMIKNTL 1080 + Q+ +E+ ++CP L++QQR+IGF +C GY+++F+S + +A GD F LIY LG ++++S++ FL+GP+RQC MF K R+ ++L ++ ++ F+ A + ++L+L++Q+CA++WY+ SYIP+ R +K L Sbjct: 27 KSSQDSDALDELSDLCPKLSYQQRIIGFAVCFGTGYLITFMSFGMFVELAEGDPVPFVLIYTLGHILSLSSSGFLVGPKRQCKNMFDKTRKWTTIVFLSTMIITLITCFVPMDSSAKLFTLILLLLIQLCASLWYSLSYIPFARRAVKKFL 177
BLAST of mRNA_L-elsbetiae_contig601.14539.1 vs. uniprot
Match: A0A1Y2GJ88_9FUNG (Protein transport protein SFT2 n=1 Tax=Lobosporangium transversale TaxID=64571 RepID=A0A1Y2GJ88_9FUNG) HSP 1 Score: 111 bits (278), Expect = 1.020e-25 Identity = 59/133 (44.36%), Postives = 89/133 (66.92%), Query Frame = 1 Query: 694 CPSLTFQQRLIGFGICLVAGYMLSFLSTISIATGDLGSFALIYCLGSLIAISATAFLIGPRRQCGKMFHKKRRIAATLYLVLLVAVIVLAFIGAPVLIILLVLILQMCAAVWYTASYIPYGRAMIKNTLCPCL 1092 C +L QRL GFGIC VAG+++S LST+S+ TG L FA+ + LG+++++ +T FLIGP +Q MF R +A+ ++L L+V +++AF L+ L++ I+Q A WY+ASYIPYGRA I+ C+ Sbjct: 24 CFNLNRTQRLYGFGICFVAGFLISILSTLSLGTGQLALFAVFFTLGNIVSLLSTTFLIGPSKQFKTMFAPVRMVASIVFLSLIVITLIVAFTLKAALLCLILCIVQFLALFWYSASYIPYGRAAIRKVAGGCI 156 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig601.14539.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig601.14539.1 >prot_L-elsbetiae_contig601.14539.1 ID=prot_L-elsbetiae_contig601.14539.1|Name=mRNA_L-elsbetiae_contig601.14539.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=195bp MAEPTPGKWYNFGGRAAEEPPAQANRFPSLPNVNIPGFRREQEPTLANEMback to top mRNA from alignment at L-elsbetiae_contig601:19223..25679+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig601.14539.1 ID=mRNA_L-elsbetiae_contig601.14539.1|Name=mRNA_L-elsbetiae_contig601.14539.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6457bp|location=Sequence derived from alignment at L-elsbetiae_contig601:19223..25679+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig601:19223..25679+ >mRNA_L-elsbetiae_contig601.14539.1 ID=mRNA_L-elsbetiae_contig601.14539.1|Name=mRNA_L-elsbetiae_contig601.14539.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1170bp|location=Sequence derived from alignment at L-elsbetiae_contig601:19223..25679+ (Laminarionema elsbetiae ELsaHSoW15)back to top |