mRNA_L-elsbetiae_contig599.14499.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig599.14499.1
Unique NamemRNA_L-elsbetiae_contig599.14499.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig599.14499.1 vs. uniprot
Match: D7G862_ECTSI (Pc13g00620 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G862_ECTSI)

HSP 1 Score: 500 bits (1287), Expect = 1.150e-170
Identity = 293/469 (62.47%), Postives = 345/469 (73.56%), Query Frame = 3 
Query:   66 DGTRRFMHAVATMILVACSLPCAGGQDASSATAVQ----ALKDAVAG---------AVLVADETESPGLLLDRGTALLLGGNSKGAVDVLDAAIVAWEEESGSKNLESTGAALTAQRLGKALALEGELERAAAAFRRAVAASEVVFGRESEETVASLTDLGLTLNQQGQFPGAASALARSLQARALKSNEGVAMKTRDATKNLEGLVTALLQRPRVEGESELDGALLAVDHVNRLAWRYFVQDLPLQGESVMQKGLEYFEKIRDGAGLGPSGPQDLAISAFLFNIGFLQLAVIGRYESAAKVLQRAHALRKAVIGEVHSLTVQAMVSRGWALTLTGKTLLAVEELTSSAKALLDDGQAHAADRLLRQALQQGYTPLGPATYANACFTQHRNMLKGWGAEGAEKSNKFFQTQMDIADDAALSGKEAAMKLATKTLARALRQEVEDDAGGSELLQLSPADKERLKEEIALL 1433
            DG RRFMHA+A M+LVACS PCA G D SSA AVQ    AL+DAV G          V+VA E +SPG LLDRGTALL  G SK AV  LDAAI  WEEE GS+ L S  AALTAQRLG+ALALEG+ ERAA+ F RAV ASE +FG +S + VA LT LGL L +QGQ   AAS L R+L   AL+ +EG+   T+D TK L+GL  +L++RP   GESEL GALLAVDH+N LA RYFVQ LP QGESV+Q    Y EK  D     PS  +DL ISA LFN+GFL+LAV+G + SAA VLQ+A  LRKAV+GE HSLT+QA+VSRGWALTLTG TLLAVEELTS+A+ALL  GQ HAADRLLRQ LQQGY PLG ATYA+AC+TQH NML+ WG+EG  K++ F   Q++IA  A L+GKE  MK AT+TLA A+R ++ED+  G ELL+L+P+DKERL EEI LL
Sbjct:    6 DGARRFMHALAAMLLVACSFPCAVG-DGSSAAAVQQKAKALRDAVEGNNRAPPAAEPVVVAPERDSPGSLLDRGTALLYAGKSKDAVAALDAAITGWEEEMGSEKLNSEAAALTAQRLGEALALEGDHERAASVFGRAVVASEALFGVKSTQAVACLTGLGLALFRQGQLSDAASTLGRALSVHALRPDEGMVTSTQDVTKTLDGLAKSLIRRPPEGGESELGGALLAVDHINPLAGRYFVQKLPHQGESVLQS--LYVEK-EDAGSSEPSALRDLVISALLFNLGFLRLAVLGEFSSAASVLQQAIELRKAVLGEAHSLTMQAVVSRGWALTLTGDTLLAVEELTSAAEALLSAGQPHAADRLLRQGLQQGYDPLGGATYAHACYTQHSNMLRAWGSEGIAKADAFCLNQLNIAKKARLTGKERPMKRATRTLAVAVRAQIEDETEGRELLKLNPSDKERLWEEIGLL 470
[Close]
BLAST of mRNA_L-elsbetiae_contig599.14499.1 vs. uniprot
Match: A0A6H5JX93_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX93_9PHAE)

HSP 1 Score: 161 bits (408), Expect = 2.050e-43
Identity = 100/166 (60.24%), Postives = 116/166 (69.88%), Query Frame = 3 
Query:   66 DGTRRFMHAVATMILVACSLPCAGGQDASSATAVQ---ALKDAV---------AGAVLVADETESPGLLLDRGTALLLGGNSKGAVDVLDAAIVAWEEESGSKNLESTGAALTAQRLGKALALEGELERAAAAFRRAVAASEVVFGRESEETVASLTDLGLTLNQQ 527
            DG RRFMHA+A M+LVACS PCA G  +S+A  +Q   AL+DAV         A  V+V  E +SPG LL+RGTALL  GNSK AV  LDAAI  WEEE GS+ L S  AALTAQRLG+ALALEG+ ERAA+ F RAV ASE +FG +S + VA LT LGL L QQ
Sbjct:    6 DGARRFMHALAAMLLVACSFPCAVGDGSSAAAVLQKAKALRDAVEDNNRAPPAAHPVVVVPERDSPGSLLERGTALLYEGNSKDAVAALDAAITGWEEEMGSEKLNSEAAALTAQRLGEALALEGDHERAASVFGRAVVASEALFGVKSTQAVACLTGLGLALFQQ 171
[Close]
BLAST of mRNA_L-elsbetiae_contig599.14499.1 vs. uniprot
Match: A0A6H5JZA8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZA8_9PHAE)

HSP 1 Score: 144 bits (364), Expect = 1.540e-37
Identity = 75/119 (63.03%), Postives = 90/119 (75.63%), Query Frame = 3 
Query: 1077 ALLDDGQAHAADRLLRQALQQGYTPLGPATYANACFTQHRNMLKGWGAEGAEKSNKFFQTQMDIADDAALSGKEAAMKLATKTLARALRQEVEDDAGGSELLQLSPADKERLKEEIALL 1433
            ALL  GQ HAADRLLRQ LQQGY PLG ATYA+AC+TQH  ML+ WG+EG  K++ F   Q+DIA  A L+GKE  MK AT+TLA A+R ++ED+  G ELL+L+P DKERL EEI LL
Sbjct:   18 ALLSAGQPHAADRLLRQGLQQGYDPLGGATYAHACYTQHSTMLRAWGSEGIAKADAFCLNQLDIAKKARLTGKERPMKRATRTLAVAVRAQIEDETEGRELLELNPGDKERLWEEIGLL 136
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig599.14499.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G862_ECTSI1.150e-17062.47Pc13g00620 n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
A0A6H5JX93_9PHAE2.050e-4360.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JZA8_9PHAE1.540e-3763.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig599contigL-elsbetiae_contig599:18105..25228 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Hectar predicted targeting categorysignal peptide
Exons7
Model size1627
Cds size1392
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816650.0619414-UTR-L-elsbetiae_contig599:18104..181541622816650.0619414-UTR-L-elsbetiae_contig599:18104..18154Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig599 18105..18154 +
1691683712.1416197-UTR-L-elsbetiae_contig599:18104..181541691683712.1416197-UTR-L-elsbetiae_contig599:18104..18154Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig599 18105..18154 +
1622816650.1557057-UTR-L-elsbetiae_contig599:25043..252281622816650.1557057-UTR-L-elsbetiae_contig599:25043..25228Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig599 25044..25228 +
1691683712.2367978-UTR-L-elsbetiae_contig599:25043..252281691683712.2367978-UTR-L-elsbetiae_contig599:25043..25228Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig599 25044..25228 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816650.0781147-CDS-L-elsbetiae_contig599:18154..184301622816650.0781147-CDS-L-elsbetiae_contig599:18154..18430Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig599 18155..18430 +
1691683712.151683-CDS-L-elsbetiae_contig599:18154..184301691683712.151683-CDS-L-elsbetiae_contig599:18154..18430Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig599 18155..18430 +
1622816650.0884807-CDS-L-elsbetiae_contig599:20926..211271622816650.0884807-CDS-L-elsbetiae_contig599:20926..21127Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig599 20927..21127 +
1691683712.1610608-CDS-L-elsbetiae_contig599:20926..211271691683712.1610608-CDS-L-elsbetiae_contig599:20926..21127Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig599 20927..21127 +
1622816650.0984726-CDS-L-elsbetiae_contig599:21457..217181622816650.0984726-CDS-L-elsbetiae_contig599:21457..21718Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig599 21458..21718 +
1691683712.1747053-CDS-L-elsbetiae_contig599:21457..217181691683712.1747053-CDS-L-elsbetiae_contig599:21457..21718Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig599 21458..21718 +
1622816650.11094-CDS-L-elsbetiae_contig599:22193..224711622816650.11094-CDS-L-elsbetiae_contig599:22193..22471Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig599 22194..22471 +
1691683712.1892397-CDS-L-elsbetiae_contig599:22193..224711691683712.1892397-CDS-L-elsbetiae_contig599:22193..22471Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig599 22194..22471 +
1622816650.1210072-CDS-L-elsbetiae_contig599:22884..230411622816650.1210072-CDS-L-elsbetiae_contig599:22884..23041Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig599 22885..23041 +
1691683712.1989686-CDS-L-elsbetiae_contig599:22884..230411691683712.1989686-CDS-L-elsbetiae_contig599:22884..23041Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig599 22885..23041 +
1622816650.131279-CDS-L-elsbetiae_contig599:23586..237181622816650.131279-CDS-L-elsbetiae_contig599:23586..23718Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig599 23587..23718 +
1691683712.2107482-CDS-L-elsbetiae_contig599:23586..237181691683712.2107482-CDS-L-elsbetiae_contig599:23586..23718Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig599 23587..23718 +
1622816650.1442387-CDS-L-elsbetiae_contig599:24956..250431622816650.1442387-CDS-L-elsbetiae_contig599:24956..25043Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig599 24957..25043 +
1691683712.2233012-CDS-L-elsbetiae_contig599:24956..250431691683712.2233012-CDS-L-elsbetiae_contig599:24956..25043Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig599 24957..25043 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig599.14499.1prot_L-elsbetiae_contig599.14499.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig599 18155..25043 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig599.14499.1

>prot_L-elsbetiae_contig599.14499.1 ID=prot_L-elsbetiae_contig599.14499.1|Name=mRNA_L-elsbetiae_contig599.14499.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=464bp
MSRQIDGTRRFMHAVATMILVACSLPCAGGQDASSATAVQALKDAVAGAV
LVADETESPGLLLDRGTALLLGGNSKGAVDVLDAAIVAWEEESGSKNLES
TGAALTAQRLGKALALEGELERAAAAFRRAVAASEVVFGRESEETVASLT
DLGLTLNQQGQFPGAASALARSLQARALKSNEGVAMKTRDATKNLEGLVT
ALLQRPRVEGESELDGALLAVDHVNRLAWRYFVQDLPLQGESVMQKGLEY
FEKIRDGAGLGPSGPQDLAISAFLFNIGFLQLAVIGRYESAAKVLQRAHA
LRKAVIGEVHSLTVQAMVSRGWALTLTGKTLLAVEELTSSAKALLDDGQA
HAADRLLRQALQQGYTPLGPATYANACFTQHRNMLKGWGAEGAEKSNKFF
QTQMDIADDAALSGKEAAMKLATKTLARALRQEVEDDAGGSELLQLSPAD
KERLKEEIALLEQ*
back to top

mRNA from alignment at L-elsbetiae_contig599:18105..25228+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig599.14499.1 ID=mRNA_L-elsbetiae_contig599.14499.1|Name=mRNA_L-elsbetiae_contig599.14499.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=7124bp|location=Sequence derived from alignment at L-elsbetiae_contig599:18105..25228+ (Laminarionema elsbetiae ELsaHSoW15)
GAGACGGCGAGACACACAGGCACCGGCACACGAAGCAAAAAACAAGCCAG
ATGTCGCGGCAGATCGATGGAACTCGTCGGTTCATGCATGCTGTGGCGAC
AATGATACTCGTGGCCTGCTCCTTGCCCTGCGCTGGCGGACAAGACGCGT
CCAGCGCGACAGCTGTGCAGGCTCTCAAGGATGCGGTAGCAGGCGCAGTA
CTAGTCGCTGATGAAACGGAGAGCCCCGGGTTGCTCCTAGACCGCGGCAC
TGCGTTATTGCTTGGAGGAAACTCGAAGGGTGCTGTTGATGTCTTGGATG
CGGCGATCGTGGCGTGGGAGGAAGAGGTCAGAGCTCAGTAAGTCGGCTGT
GTACAAGAGAAAGCTCTTTTGGCTACCGTAGATGACACAATATACCACAC
CCCTGGACAGATTTTCAAAGCTCGATTCCTCCTCAGCAAGAAGAGTGCGA
GTGCTAAGAAAAGAGGTGGCGTTGGAAAGATCTACTCGAGGGCTGTCCGA
AAATGTGTTGCCTGGTGCTGATACCTTCTTAGTTACGGAGCAATCGAGCT
CTAAAATTCGGTGGGGTGCGGTATCTTGTGTCATCTACGGTAACCGTTGA
TAGGTCAACGAGCCTCTACTGACTTCATGATCAACAGCTTACAATTGGAG
GAAACGAATTCTGGATTCCGCGAGTTTCGTCAAAGATAACAGATAAGCCT
CTCCTCCGGCGATCTGTTTTCGGATCAAAGCAGAGGTTGGGTTAAACCCC
ACGGAGTCCCATCTCAAAATGTGGGTTAGATTCCGTTTTTGATTTTTGAT
TAAATACCTGATTTGTCTTTCAAAAGGCTTCTCCCCGGAAATATTTGCTG
GTTGACCTAACACAGTTATGTGCAGGGGAAGTTTTGAACTTTTCTAATAT
TTTACTGTATACTGTTTAAGTGTTTTATTACTTGAACTGTTAATTCACCA
CGGATCCCGTCTCTACATAAGGCCGATTATTACGGTTGTTATTTTTCGAA
TATCATTTGGCGGGGGGGGGTCGATTATTTCCGTCGGAAGGATAAGGATT
TGCAAGACAAATAATAAGCTGAGCCGAGAGGCCTTCCCACGGCTTGTGGC
TTGTGGAGCATTTTTTTTTCGTGGGGAAGAAAATGCTATTGTGCAGAACA
GGATGCATAGGTCACGTTTTTTGCTCGTAGTCGGCCGACAAGTAGCAGAG
CGCTCTTATTTTGGGACGCCTGCAGAGGGCATGTGCATGACCGCATGCCA
TTGACTACTGTTTATTGATCTCGCGGGCGGAAGGCCTCTCTCTGACACAT
GATTTTGACTTGCAGCACAACCCAGCGACGAGAAAAAACGAAGAGTCCAA
AAAGCTCCGCATATAAACGAACTTCAGTCGACGTTAACTGCTCGCGTGCA
CTCAACACTGCACAGAAAGCCCTGGTTTTGGGACGCCTGCAGAGGCCATG
AGTATGACCCCACGCCATTGGCTGCAGTTTGTGGTTATTATTGACCTAAT
GCCTCCGTCGGGCATGCGGTTTTTGCTTGACACACATCAACACAAGGACG
AAAAAATGCAAGAAGAGTCGAAAAAGTTCCGCATTGAAATCAACTTCAGT
CGACGTTGGCTGATCGCGCGCACTCAATTCTTGGCCGCGTGCCCTGGCTT
CGGGACCCCTGCAGAGGCCTTGTGTATGATCGCACGCCATTGAGTGCAGT
TTGTGGTTATTACTGGCCCGAGGCCTTTGTCGAGCATGCATTTTTTGCTT
GACACATATGAAGCAGGCCCAAAAACGGCTCTTTGAACCCCCAAACGTAT
ATTGGGAGCAGCGCAGTGTTTGCATGTTGGCGGTTTTAGCTCGTGCGCGA
TCAACAAAGCGCTGAACGCCCTGAATTTTGGATGCCTGCAGAGGGTTTGT
TTATGGTCTCACGGTGTTGGCCTCTGTTTGGGCAGTAGTTAGAGTAGTTG
CTCATTCTGGCAAGATCACCTTTGTTGTCGGGTGTGACCCCCCCAAATAT
AATTTATAATCGACGTCTGCTCCAGGTTTTATTCTGGCCGAATATTTCAC
TGGGCGACTAGATTCCTAGAAATATTTCGTTGTCTCATAATTTCTGAGAC
GATATTTGCCCAAATTATTACCCGTAAGAAGCCTTCGTTCTTTACCTTCG
TTTTTTATTTCCAGGCAAATGTACCCCCCCCCCCCCCCAAATAAAATTCG
AAAAATAACAACCGTAAGAATCGGCCTCATGTGGGGAGAGACGTTCCTTC
GTTGATTTCCTTATTTGTTTTCAAAGTCGGCAAAAGCTGGTGTCAAAACA
TCGTTTTTCGGCGACATTCGACTGGTTACACAAAGAAAGGCGAAGACAAA
GATCGCCTTGCGCGTCCAAAATCAAGTTTAGATTAATCGTTCCGTGGGTA
GAGCTGAAAGCACGTATGTATAGGGTGGCGGCACCGTCTTGTTATTTTTT
AAAGATAAAACAGTTAGTCAAAAATGGAACCTAACCCACATTGAGACGGG
ACTCCGTGAGATTCAGACGAATTTTTTTTCGTCGATCAACGAAGTTGCTC
TTTTTTTGAGACAATTTTCAAATTCGGTGCTTTTCGGCGATCGCCGGCGG
GGGGGGGGGCTTGTCACAGAGAGCTATAGTCGAATGGTGCCTGGACCACG
GTACGGTTCTCCCCCTGGGCGGGAGGGACAGTAAACAGCAGTACAACAAT
CGTAGTAGGTAACCCTAGACTACCCTCACCCTCCGTCACCCTCCATCGCT
CGCGCCGCCGCCACCCCCCTACACGGCGTTGCACCGGACTACTGCTGTCT
TTGCGTGGGGTAATTGATCCAGTCGGGTTCAAAGAATCTCGAAAGCACCG
GCGCGGCACTAACCGCGCAGCGCCTGGGAAAGGCGCTCGCGCTTGAGGGG
GAGCTCGAGCGCGCTGCCGCGGCTTTTCGCCGTGCGGTTGCCGCGAGCGA
GGTTGTTTTCGGGCGCGAGAGTGAGGAGACTGTGGCGAGCTTGACGGACC
TTGGGCTGACCTTGAATCAGCAGGTAAATGAAGCACCAACCACGGCTAGT
TGCCACGTCGCAGCAGTTGTTGTATCGGAGTCGTCGGGTTATCGTGCTGC
TGTCTCTTTGTATCATAGGTACATCGATCGACGACTTGTAAGCAACAGCA
TGCGTAAGTCTCGCCTCGCTTCCGGGAGACTTGGTTTGAAATAGGAATCG
CATGTGTAACTCTGCGGTGTTGATGCCCCCAAGTGCCATCAAGGTCACCG
CCCACCACACGCACGTCCCAAGCTAGAGGCCTACCGTAGTCTAGGATTGA
CCGATCTATCCGCGTCCTCGCGCTCTGCTGTTTCTTGTCGCTGTTCGTGC
AAGGGCCAATTCCCAGGCGCGGCTTCCGCTCTCGCTAGGTCGCTGCAAGC
CCGCGCGCTTAAGTCAAACGAGGGAGTAGCCATGAAAACCCGGGATGCGA
CCAAAAACCTCGAAGGTCTGGTTACGGCGCTGTTGCAGCGCCCCCGCGTG
GAGGGCGAGAGCGAGCTCGACGGGGCGCTGTTGGCCGTAGACCACGTCAA
CCGCCTGGCGTGGCGTTACTTCGTGCAAGACTTGCCGCTTCAGGGGGAGT
CCGTGATGCAGAAGGTATGTATGTACGCACGCTGGATTTCGCTTTGAATC
TGCTTTGGGGTTCTGTGGGCCTGGGTACAGCACTACTGTAACGCAACAAA
TTTCGGTTTCATCTGAAGAGAAATCCGACGTTTGAGGAATTAGAAAATTG
CGGGTGATGCACGGCGCTCGGCTTTCAGAAGAATTGTAGAATGAGATGGT
GTAAGTTCGTGCGTGATTGAGGTGAAAATAAGGTGCGGCTTTGATACCGT
TCGGCCCATGCGCTAGGCGCGCCTTCCGTCTTCCAGGCCAAGGCGACACA
GCGACGCAGCGGAAGCGTTCCTTCCCTCATGTAACGGGGTACCTACCGCC
GTTGCGATACCGCGGTCAGATCCTAAGCGTAACAGACAGATAGCGGCAGA
GACCTACAACACGCCGCCTGGCCTCAAGATTTTCCTCACATGTTGTCCCC
CCGACAACATCATTCTTTCGCGTCGCCCCCCCCCCCCAGGGGTTGGAATA
TTTTGAAAAGATAAGAGACGGGGCCGGACTCGGCCCTTCCGGGCCTCAGG
ACCTCGCGATCTCCGCATTTCTTTTCAACATTGGGTTCCTCCAGCTGGCA
GTTATCGGAAGGTATGAGTCCGCCGCGAAAGTGCTCCAGCGGGCGCACGC
GCTGAGAAAAGCAGTGATCGGAGAAGTGCACAGCCTGACGGTGCAGGCGA
TGGTCAGCCGGGGATGGGCGTTGACTCTGACGGGGAAGACGCTGCTGGCC
GTGGAGGAGCTTACAAGGTGAAAAGCAGAGTAGAGAGTGACGGCAAGAAA
TGAGGAGGGTCTGCTTCATCCAGGTTTATGGTTGTTCTTCTTTTTACTTG
GATAAATACCGCTGCGCCCCTGGCGAAAAACGCATGCAGGTGTGCATGGA
AGGGAGAGAGCTATTGTGATTTTGGCGAGGTGGTGTACTATGTACTACTG
CTGTGTCACGAATCACTAATTCTGTACGTGACTGACAGGCAGACAGACAG
ACAGACGTTAGACACGATGTTTGTTGGCTGACGTTCAACTTCGGCAGACA
GGACACGATTGGGACCAAAAGGATACGTCGTTGTCTTGCTTGTTTTTGTG
ATGGGATCCAACGCGACCCTTGCCGTCCCTGCTTTGGTGACTCTCTTATC
CTCCCTTGCGCCGCTTCATTTTTTCTCTAGCTCGGCGAAGGCCCTTCTCG
ACGACGGGCAGGCGCATGCGGCCGACAGGCTTCTTCGCCAGGCACTGCAG
CAGGGCTACACCCCCCTTGGGCCCGCGACCTATGCGAACGCCTGCTTCAC
GCAGCATCGTAACATGCTCAAGGGATGGGGTGCCGAGGTGCGTTGGTGCT
TTTTAGGGCGGCCCTCCCTAACTGGTGCTGCCAGCTCTACGGCTGCGCTA
CTTGTATATACTTGTTTTTGTTTTTTTTCTTTGGGCATACATAGATACTG
ACGTTTCTTGACAGAGAACAGGGCACGACATCCTGCTCCCTCTTTGCCTC
TCTATATCTTGTCTGGAGACCAGCGGCATTTTGTCTCTGCATTTGGTTGC
AAGTGCCCTACCTCCCCCCCGTGCGCTATTTCGCGAGAGCACCGGGGATA
TCCCGTCCACCGGTTAGAGCAAGCCGCGCCTGTAGGTCAGTATCCACGGT
GTGCCGCCCGCGCTTAGATTGAGATCCGTACCCATGCTTTCCTCGGCGTG
CTGGCCGCTGAGTGTCTGTGCCGTATACAAGCCTTGCCGCTCGGTCGGTG
AATGGGAAACGATCCGCACTGGTGCACATCACACGCGCGCGCGCATCGCA
CAAAGCAGTGCTTCGTCTTCGTGTACCCAACACCCATGCCCACCTTCGCT
CCTGTCTGGAATATGCGCCCGTCCTTGTGCAGGGGGCTGAGAAGTCGAAC
AAGTTCTTTCAGACCCAAATGGATATCGCCGACGATGCCGCACTTTCAGG
CAAAGAAGCAGCGATGAAGTTGGCCACGAAAACCCTGGCTAGAGCGCTGC
GTCAGGAGGTTGAGGTGAGCATGGGGGTGCTGTGAATGTATGCAGTACCA
TATGTCGCGGTGAATAAAATGTAAGATTTTACCGTAGACGACACAAGATA
CCACGGGTACCGAAGATACCCCCCCCCCCCCCTCTCCCCACAGAAAACCA
CTGCGGTGATGCTATTTTTTAAGCGCAAAATAATAGACCCATTTATCACC
GGGGCACCGAAGATAACACCCCCCCTGAGGTTACACCTCATAAACCACGG
CGGGGCATGCAGTTTAGTGTATCCTCGCTGAATATGGGTAGGTAGACAGG
GGCAGTCTTCGTGGGGTCCTGTCGGCGATTAGCTTGTTGCGTGAAAACAG
CTCTTGTTTTGATTATGCTGTTTGCACTCGCTAGAAAATGCGCCGGTAAG
AGATTGGCAATAACGGAATCGAGCGGGGAACGCAGACGGGTTTCAGCTTT
TTCGTGCCTGTCTAGAATCTAGAATCCCATCGTCTTGGTGCCACACCAGG
TGTTGATGGAACTTTTATTTCGGCGAGGGGTTGATGGTGTACATGCATGC
CCGGATTTCATAAGCATGCATGAACCGTGATTGAGACACCCCCCTTGTTA
CCAGCCCCACTTACTCCGAAGTACCTCCTGCAGACACAGGGCAGCAGTCA
TCGCAGGCAGTGATATCACTCGCCGCCGCGATCATCCTCCCTTATTATCA
CTCCCCCTTGCAGACGGTACAGCAGCAGTATCGTAGGCAGTGATATATCA
CCCCGCTTTGATGGGCGCCCCAACGACCTCCACCTTATCACCGGGGGACA
AAAGATACCACCCCCCCCCACAGAAAACCACCCGCGGTGATAATATTTTC
AAGCGCCCAAACGTATCACCGGGGGGGTGGTTTATTGTGTCATCTACGGT
ACGTTTCGGAGGACCGTCACAAAAGTGAGACGGGTAGGAATGAGGGTACC
GGCTGGTGTGTTCAGGCATCCTAGGGTGCTTTACCGCGTTTTTTGTTTGC
GTCGTGCGGAAATATACATATTTTACTGCTCACAGGAGCGCCATTGCATC
CTTATTAAGGTTACAGCTGCTGCTCATCACAACCATGACACAAGAGAAAT
ATCAAACGCCCCAAAGGTCGTGGATAGGCCGAGGGAGCGTGCTTTTTGCC
CACCACTTGTTAACAAATCGAGCACCAAAGCCACTTAACGCTTGTGTGCC
CTCGACCCGCTCTACGCACGCGCAACGCCATGTACTTGCCATTTATGTCC
AGGACGATGCTGGGGGAAGTGAGCTTCTGCAGCTGTCTCCAGCCGATAAA
GAGCGGCTGAAGGAGGAAATAGCACTGCTCGAACAGTGACGTCTCTGGTC
AACGTTGATTGGCGTGACTTGAAATCTGTTTTTTTACGTTTCCTGGACTG
ACTGTGTTTTGGGGGGCTCGTGTAAAGGGGATACGGGGTACAAAGCACTG
CTTTCTACTACTAAGGTGTGGGAATTCGGCCGCTTGCTTGTGATGAACCT
GAACCTTGACAGTCCTGTCCCTCT
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig599:18105..25228+

>mRNA_L-elsbetiae_contig599.14499.1 ID=mRNA_L-elsbetiae_contig599.14499.1|Name=mRNA_L-elsbetiae_contig599.14499.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2784bp|location=Sequence derived from alignment at L-elsbetiae_contig599:18105..25228+ (Laminarionema elsbetiae ELsaHSoW15)
ATGTCGCGGCAGATCGATGGAACTCGTCGGTTCATGCATGCTGTGGCGAC
AATGATACTCGTGGCCTGCTCCTTGCCCTGCGCTGGCGGACAAGACGCGT
CCAGCGCGACAGCTGTGCAGGCTCTCAAGGATGCGGTAGCAGGCGCAGTA
CTAGTCGCTGATGAAACGGAGAGCCCCGGGTTGCTCCTAGACCGCGGCAC
TGCGTTATTGCTTGGAGGAAACTCGAAGGGTGCTGTTGATGTCTTGGATG
CGGCGATCGTGGCGTGGGAGGAAGAGATGTCGCGGCAGATCGATGGAACT
CGTCGGTTCATGCATGCTGTGGCGACAATGATACTCGTGGCCTGCTCCTT
GCCCTGCGCTGGCGGACAAGACGCGTCCAGCGCGACAGCTGTGCAGGCTC
TCAAGGATGCGGTAGCAGGCGCAGTACTAGTCGCTGATGAAACGGAGAGC
CCCGGGTTGCTCCTAGACCGCGGCACTGCGTTATTGCTTGGAGGAAACTC
GAAGGGTGCTGTTGATGTCTTGGATGCGGCGATCGTGGCGTGGGAGGAAG
AGTCGGGTTCAAAGAATCTCGAAAGCACCGGCGCGGCACTAACCGCGCAG
CGCCTGGGAAAGGCGCTCGCGCTTGAGGGGGAGCTCGAGCGCGCTGCCGC
GGCTTTTCGCCGTGCGGTTGCCGCGAGCGAGGTTGTTTTCGGGCGCGAGA
GTGAGGAGACTGTGGCGAGCTTGACGGACCTTGGGCTGACCTTGAATCAG
CAGTCGGGTTCAAAGAATCTCGAAAGCACCGGCGCGGCACTAACCGCGCA
GCGCCTGGGAAAGGCGCTCGCGCTTGAGGGGGAGCTCGAGCGCGCTGCCG
CGGCTTTTCGCCGTGCGGTTGCCGCGAGCGAGGTTGTTTTCGGGCGCGAG
AGTGAGGAGACTGTGGCGAGCTTGACGGACCTTGGGCTGACCTTGAATCA
GCAGGGCCAATTCCCAGGCGCGGCTTCCGCTCTCGCTAGGTCGCTGCAAG
CCCGCGCGCTTAAGTCAAACGAGGGAGTAGCCATGAAAACCCGGGATGCG
ACCAAAAACCTCGAAGGTCTGGTTACGGCGCTGTTGCAGCGCCCCCGCGT
GGAGGGCGAGAGCGAGCTCGACGGGGCGCTGTTGGCCGTAGACCACGTCA
ACCGCCTGGCGTGGCGTTACTTCGTGCAAGACTTGCCGCTTCAGGGGGAG
TCCGTGATGCAGAAGGGCCAATTCCCAGGCGCGGCTTCCGCTCTCGCTAG
GTCGCTGCAAGCCCGCGCGCTTAAGTCAAACGAGGGAGTAGCCATGAAAA
CCCGGGATGCGACCAAAAACCTCGAAGGTCTGGTTACGGCGCTGTTGCAG
CGCCCCCGCGTGGAGGGCGAGAGCGAGCTCGACGGGGCGCTGTTGGCCGT
AGACCACGTCAACCGCCTGGCGTGGCGTTACTTCGTGCAAGACTTGCCGC
TTCAGGGGGAGTCCGTGATGCAGAAGGGGTTGGAATATTTTGAAAAGATA
AGAGACGGGGCCGGACTCGGCCCTTCCGGGCCTCAGGACCTCGCGATCTC
CGCATTTCTTTTCAACATTGGGTTCCTCCAGCTGGCAGTTATCGGAAGGT
ATGAGTCCGCCGCGAAAGTGCTCCAGCGGGCGCACGCGCTGAGAAAAGCA
GTGATCGGAGAAGTGCACAGCCTGACGGTGCAGGCGATGGTCAGCCGGGG
ATGGGCGTTGACTCTGACGGGGAAGACGCTGCTGGCCGTGGAGGAGCTTA
CAAGGGGTTGGAATATTTTGAAAAGATAAGAGACGGGGCCGGACTCGGCC
CTTCCGGGCCTCAGGACCTCGCGATCTCCGCATTTCTTTTCAACATTGGG
TTCCTCCAGCTGGCAGTTATCGGAAGGTATGAGTCCGCCGCGAAAGTGCT
CCAGCGGGCGCACGCGCTGAGAAAAGCAGTGATCGGAGAAGTGCACAGCC
TGACGGTGCAGGCGATGGTCAGCCGGGGATGGGCGTTGACTCTGACGGGG
AAGACGCTGCTGGCCGTGGAGGAGCTTACAAGCTCGGCGAAGGCCCTTCT
CGACGACGGGCAGGCGCATGCGGCCGACAGGCTTCTTCGCCAGGCACTGC
AGCAGGGCTACACCCCCCTTGGGCCCGCGACCTATGCGAACGCCTGCTTC
ACGCAGCATCGTAACATGCTCAAGGGATGGGGTGCCGAGCTCGGCGAAGG
CCCTTCTCGACGACGGGCAGGCGCATGCGGCCGACAGGCTTCTTCGCCAG
GCACTGCAGCAGGGCTACACCCCCCTTGGGCCCGCGACCTATGCGAACGC
CTGCTTCACGCAGCATCGTAACATGCTCAAGGGATGGGGTGCCGAGGGGG
CTGAGAAGTCGAACAAGTTCTTTCAGACCCAAATGGATATCGCCGACGAT
GCCGCACTTTCAGGCAAAGAAGCAGCGATGAAGTTGGCCACGAAAACCCT
GGCTAGAGCGCTGCGTCAGGAGGTTGAGGGGGCTGAGAAGTCGAACAAGT
TCTTTCAGACCCAAATGGATATCGCCGACGATGCCGCACTTTCAGGCAAA
GAAGCAGCGATGAAGTTGGCCACGAAAACCCTGGCTAGAGCGCTGCGTCA
GGAGGTTGAGGACGATGCTGGGGGAAGTGAGCTTCTGCAGCTGTCTCCAG
CCGATAAAGAGCGGCTGAAGGAGGAAATAGCACTGCTCGAACAGTGAGAC
GATGCTGGGGGAAGTGAGCTTCTGCAGCTGTCTCCAGCCGATAAAGAGCG
GCTGAAGGAGGAAATAGCACTGCTCGAACAGTGA
back to top