mRNA_L-elsbetiae_contig5975.14472.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig5975.14472.1
Unique NamemRNA_L-elsbetiae_contig5975.14472.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig5975.14472.1 vs. uniprot
Match: A0A6H5KXR6_9PHAE (PNPLA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXR6_9PHAE)

HSP 1 Score: 308 bits (790), Expect = 4.340e-95
Identity = 154/170 (90.59%), Postives = 161/170 (94.71%), Query Frame = 1
Query:    1 HHLRYYGSFRYMVRQAIRATTAAPSFFAPLMINGALYSDGALLCNNPSAVAVHEAKHVFPGVPVEMVVSIGTGCFFEEKREFLEPA-LGWDGIINQVIASATETEITTDIVSDLLPPEQFFRFNPRMEDMPIDEVRKERLDGLKTLADEYFEIPENQARLQEMAERMLPD 507
            H  RY+GSFR+MVRQAIRATTAAP+FF PLMINGALYSDGALLCNNPSAVA HEAKH FPGVP+EM+VSIGTGCFFEEKREFLEPA LGWDGIINQVIASATETEITTDIVSDLLPPEQFFRFNPRM DMPIDEVRKERLD LKTLA+EYFE PENQARLQEMAE+MLPD
Sbjct: 1070 HQGRYHGSFRHMVRQAIRATTAAPTFFPPLMINGALYSDGALLCNNPSAVAFHEAKHAFPGVPIEMIVSIGTGCFFEEKREFLEPAGLGWDGIINQVIASATETEITTDIVSDLLPPEQFFRFNPRMTDMPIDEVRKERLDWLKTLANEYFETPENQARLQEMAEKMLPD 1239          
BLAST of mRNA_L-elsbetiae_contig5975.14472.1 vs. uniprot
Match: D7FNE8_ECTSI (Novel protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNE8_ECTSI)

HSP 1 Score: 308 bits (790), Expect = 1.040e-94
Identity = 154/170 (90.59%), Postives = 161/170 (94.71%), Query Frame = 1
Query:    1 HHLRYYGSFRYMVRQAIRATTAAPSFFAPLMINGALYSDGALLCNNPSAVAVHEAKHVFPGVPVEMVVSIGTGCFFEEKREFLEPA-LGWDGIINQVIASATETEITTDIVSDLLPPEQFFRFNPRMEDMPIDEVRKERLDGLKTLADEYFEIPENQARLQEMAERMLPD 507
            H  RY+GSFR+MVRQAIRATTAAP+FF PLMINGALYSDGALLCNNPSAVA HEAKH FPGVP+EM+VSIGTGCFFEEKREFLEPA LGWDGIINQVIASATETEITTDIVSDLLPPEQFFRFNPRM DMPIDEVRKERLD LKTLA+EYFE PENQARLQEMAE+MLPD
Sbjct: 1183 HQGRYHGSFRHMVRQAIRATTAAPTFFPPLMINGALYSDGALLCNNPSAVAFHEAKHAFPGVPIEMIVSIGTGCFFEEKREFLEPAGLGWDGIINQVIASATETEITTDIVSDLLPPEQFFRFNPRMTDMPIDEVRKERLDWLKTLANEYFETPENQARLQEMAEKMLPD 1352          
BLAST of mRNA_L-elsbetiae_contig5975.14472.1 vs. uniprot
Match: A0A835YX58_9STRA (Calcium-independent phospholipase-like protein A2-gamma, C terminal part n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX58_9STRA)

HSP 1 Score: 234 bits (598), Expect = 3.250e-74
Identity = 108/159 (67.92%), Postives = 138/159 (86.79%), Query Frame = 1
Query:   10 RYYGSFRYMVRQAIRATTAAPSFFAPLMINGALYSDGALLCNNPSAVAVHEAKHVFPGVPVEMVVSIGTGCFFEEKREFLEPALGWDGIINQVIASATETEITTDIVSDLLPPEQFFRFNPRMEDMPIDEVRKERLDGLKTLADEYFEIPENQARLQEM 486
            RY GS+R+ VR+++RATTAAP+FF+PL+ING LYSDGAL+ NNP+AVA+HEAKH++PGVPVE+VVS+GTGCFFE+ R+F +PA+GWDGI+NQ+I+SATETE T DI+SDL+P +Q+FRFNPRM DM IDE R ERL  LK L+D YFE P  +A+L E+
Sbjct:  165 RYSGSYRHTVRESLRATTAAPTFFSPLLINGTLYSDGALMANNPTAVALHEAKHIYPGVPVELVVSLGTGCFFEQARDFSDPAVGWDGIVNQLISSATETENTNDIMSDLVPAQQYFRFNPRMTDMAIDETRPERLAFLKELSDRYFEEPATRAQLDEL 323          
BLAST of mRNA_L-elsbetiae_contig5975.14472.1 vs. uniprot
Match: A0A4D9CW07_9STRA (PNPLA domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CW07_9STRA)

HSP 1 Score: 165 bits (418), Expect = 2.040e-45
Identity = 82/158 (51.90%), Postives = 111/158 (70.25%), Query Frame = 1
Query:   10 RYYGSFRYMVRQAIRATTAAPSFFAPLMINGALYSDGALLCNNPSAVAVHEAKHVFPGVPVEMVVSIGTGCFFEEKREFLEPALGWDGIINQVIASATETEITTDIVSDLLPPEQFFRFNPRMEDMPIDEVRKERLDGLKTLADEYFEIPENQARLQE 483
            RY G FR  VR+AIRATTAAP++F PL+  G ++SDGALL NNP+A+A+HEAK ++P VP+E VVS+GTG   E +        GW  I NQ+I SAT TE   D ++D LP ++++RFNP +E++ IDE+R E+L  LK  A EYF+ P N+ RL +
Sbjct:  359 RYEGDFRAKVREAIRATTAAPTYFYPLVRGGMVHSDGALLANNPTAIAIHEAKIIYPNVPIEAVVSVGTGNVLEPQPV---EGFGWAPIFNQIINSATNTEAVHDSLADFLPQDRYYRFNPNIENVSIDEIRPEKLAYLKATAKEYFQDPRNKERLDQ 513          
BLAST of mRNA_L-elsbetiae_contig5975.14472.1 vs. uniprot
Match: A0A0G4F2X6_VITBC (PNPLA domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4F2X6_VITBC)

HSP 1 Score: 163 bits (412), Expect = 2.510e-43
Identity = 82/162 (50.62%), Postives = 115/162 (70.99%), Query Frame = 1
Query:   10 RYYGSFRYMVRQAIRATTAAPSFFAPLMINGALYSDGALLCNNPSAVAVHEAKHVFPGVPVEMVVSIGTGCFFEEKREFLEPALGWDGIINQVIASATETEITTDIVSDLLPPEQFFRFNPRMEDMPIDEVRKERLDGLKTLADEYFE-IPENQARLQEMAE 492
            +Y GSFR   R A+RATTAAP+FF  L ++G  Y DGALL NNP+A+A+ EAK +FP  P+E +VS+GTG F    ++     +GWDGI+NQ++ SAT TE T +++S+ LP +++FRFNP++E   IDE    +LD +K  A  YFE IP+N+ RLQ++AE
Sbjct: 1573 KYAGSFRIRCRDALRATTAAPTFFPALRLDGEAYGDGALLANNPTAIALAEAKALFPDTPIEAIVSVGTGRF---PQQSYGGRVGWDGIVNQLVCSATNTEGTHEMLSEFLPEDKYFRFNPKIEMWAIDETDPGKLDQMKRFAARYFEDIPDNRRRLQQLAE 1731          
BLAST of mRNA_L-elsbetiae_contig5975.14472.1 vs. uniprot
Match: A0A7S2RDV7_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RDV7_9STRA)

HSP 1 Score: 154 bits (389), Expect = 2.260e-42
Identity = 81/179 (45.25%), Postives = 117/179 (65.36%), Query Frame = 1
Query:   10 RYYGSFRYMVRQAIRATTAAPSFFAPLMINGALYSDGALLCNNPSAVAVHEAKHVFPGVPVEMVVSIGTGCFFEEKREFLEPALGWDGIINQVIASATETEITTDIVSDLL-------------PPEQFFRFNPRM---EDMPIDEVRKERLDGLKTLADEYFEIPENQARLQEMAERM 498
            R+ GSFR + R A+RATTAAP+FF P++++G LY DG ++ +NP+AVAVHEA+ +FP VP+EMVVS GTG F+EEK     P +GWDGII Q++ SAT+ E    I+ D+L                +++RFNP +    D PIDE+  +RL  L  +  +Y + PE Q +L+E++E +
Sbjct:  185 RHAGSFRVLQRAALRATTAAPTFFKPVLMSGELYCDGGIVASNPTAVAVHEARTLFPDVPIEMVVSCGTGAFYEEKSP---PRIGWDGIIGQIVNSATDGEQIHHIMEDILGQGGTAQLGKSSVSQTRYYRFNPIIGMPNDFPIDEIDPDRLSELSDITMKYMKQPEQQKKLKEISETL 360          
BLAST of mRNA_L-elsbetiae_contig5975.14472.1 vs. uniprot
Match: U6KSJ3_EIMTE (Patatin-like phospholipase domain-containing protein, putative n=1 Tax=Eimeria tenella TaxID=5802 RepID=U6KSJ3_EIMTE)

HSP 1 Score: 157 bits (396), Expect = 3.590e-41
Identity = 81/161 (50.31%), Postives = 108/161 (67.08%), Query Frame = 1
Query:   10 RYYGSFRYMVRQAIRATTAAPSFFAPLMINGALYSDGALLCNNPSAVAVHEAKHVFPGVPVEMVVSIGTGCFFEEKREFLEPALGWDGIINQVIASATETEITTDIVSDLLPPEQFFRFNPRMEDMPIDEVRKERLDGLKTLADEYFEIPENQARLQEMAE 492
            RY GS    V+ A+RATTAAP FF+   I G L  DGALL NNP+AVA+ EAK ++PGVP+E+VVSIGTG    E+    +   GWDG+ NQ++ +AT TE   +++ DLLPP  +FRFNP ++ MPIDE  KERL+ LK  A  + E   N+  +Q +A+
Sbjct: 1714 RYEGSCCVRVKDALRATTAAPGFFSGKKIGGELLMDGALLANNPAAVAIAEAKALYPGVPIEVVVSIGTGQCAPER---CDTRTGWDGVFNQLVNAATNTEAIHELLQDLLPPTAYFRFNPVIDAMPIDETSKERLESLKVAAKRFVEEKRNKEDIQRLAD 1871          
BLAST of mRNA_L-elsbetiae_contig5975.14472.1 vs. uniprot
Match: D8LL86_ECTSI (Similar to Calcium-independent phospholipase A2-gamma, C terminal part n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL86_ECTSI)

HSP 1 Score: 150 bits (379), Expect = 5.430e-41
Identity = 72/158 (45.57%), Postives = 108/158 (68.35%), Query Frame = 1
Query:   13 YYGSFRYMVRQAIRATTAAPSFFAPLMINGALYSDGALLCNNPSAVAVHEAKHVFPGVPVEMVVSIGTGCFFEEKREFLEPALGWDGIINQVIASATETEITTDIVSDLLPPEQFFRFNPRMEDMPIDEVRKERLDGLKTLADEYFEIPENQARLQEM 486
            Y G +R  +R+ +RATTAAPSFF PL+    +Y+DGA L NNP+++A+ EAK ++P VP+E V+S+GTG +   ++E   P + W  ++NQ++ SAT+TE    ++   LP +Q+FRFN  ++   IDE R E+LD LK LA EY + PE +AR +E+
Sbjct:  166 YKGDYRRKMRECVRATTAAPSFFTPLVDGKMMYADGAFLANNPTSIALTEAKLLYPNVPIECVLSVGTGFYVPTRKE---PGMSWGTVLNQLVNSATDTEGVDSMLKTFLPRDQYFRFNAPIQPFDIDETRVEKLDELKALAKEYTQRPEIKARAEEL 320          
BLAST of mRNA_L-elsbetiae_contig5975.14472.1 vs. uniprot
Match: U6N064_9EIME (Patatin-like phospholipase domain-containing protein, putative n=1 Tax=Eimeria necatrix TaxID=51315 RepID=U6N064_9EIME)

HSP 1 Score: 155 bits (393), Expect = 9.090e-41
Identity = 80/161 (49.69%), Postives = 108/161 (67.08%), Query Frame = 1
Query:   10 RYYGSFRYMVRQAIRATTAAPSFFAPLMINGALYSDGALLCNNPSAVAVHEAKHVFPGVPVEMVVSIGTGCFFEEKREFLEPALGWDGIINQVIASATETEITTDIVSDLLPPEQFFRFNPRMEDMPIDEVRKERLDGLKTLADEYFEIPENQARLQEMAE 492
            +Y GS    V+ A+RATTAAP FF+   I G L  DGALL NNP+AVA+ EAK ++PGVP+E+VVSIGTG    E+    +   GWDG+ NQ++ +AT TE   +++ DLLPP  +FRFNP ++ MPIDE  KERL+ LK  A  + E   N+  +Q +A+
Sbjct: 1725 KYEGSCCVRVKDALRATTAAPGFFSGKKIGGELLMDGALLANNPAAVAIAEAKALYPGVPIEVVVSIGTGQCAPER---CDTRTGWDGVFNQLVNAATNTEAIHELLQDLLPPTAYFRFNPVIDAMPIDETSKERLESLKVAAKRFVEEKRNKEDIQRLAD 1882          
BLAST of mRNA_L-elsbetiae_contig5975.14472.1 vs. uniprot
Match: A0A6P6RUW6_9EIME (uncharacterized protein LOC113146779 n=1 Tax=Cyclospora cayetanensis TaxID=88456 RepID=A0A6P6RUW6_9EIME)

HSP 1 Score: 154 bits (389), Expect = 3.030e-40
Identity = 78/166 (46.99%), Postives = 112/166 (67.47%), Query Frame = 1
Query:   10 RYYGSFRYMVRQAIRATTAAPSFFAPLMINGALYSDGALLCNNPSAVAVHEAKHVFPGVPVEMVVSIGTGCFFEEKREFLEPALGWDGIINQVIASATETEITTDIVSDLLPPEQFFRFNPRMEDMPIDEVRKERLDGLKTLADEYFEIPENQARLQEMAERMLPD 507
            RY GS    VR A+RATTAAP FF+   +   L +DGALL NNP+AVA+ EA+ ++PGVP+E+VVS+GTG    E+    +   GWDGI  Q++ +AT TE   +++++LLPP  +FRFNP ++ + IDE  KERLD LK  A  Y + P+N+  +Q +A+ + P+
Sbjct:  909 RYEGSCCVRVRDALRATTAAPGFFSGKKMGRELLADGALLANNPTAVAIAEARALYPGVPIELVVSVGTGKCASER---CDTRTGWDGIFTQLVNAATNTETIHELLTELLPPSIYFRFNPEIDTVSIDETSKERLDKLKLAARRYADAPKNKEAIQRLADILRPE 1071          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5975.14472.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KXR6_9PHAE4.340e-9590.59PNPLA domain-containing protein n=1 Tax=Ectocarpus... [more]
D7FNE8_ECTSI1.040e-9490.59Novel protein n=1 Tax=Ectocarpus siliculosus TaxID... [more]
A0A835YX58_9STRA3.250e-7467.92Calcium-independent phospholipase-like protein A2-... [more]
A0A4D9CW07_9STRA2.040e-4551.90PNPLA domain-containing protein n=1 Tax=Nannochlor... [more]
A0A0G4F2X6_VITBC2.510e-4350.62PNPLA domain-containing protein n=1 Tax=Vitrella b... [more]
A0A7S2RDV7_9STRA2.260e-4245.25Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
U6KSJ3_EIMTE3.590e-4150.31Patatin-like phospholipase domain-containing prote... [more]
D8LL86_ECTSI5.430e-4145.57Similar to Calcium-independent phospholipase A2-ga... [more]
U6N064_9EIME9.090e-4149.69Patatin-like phospholipase domain-containing prote... [more]
A0A6P6RUW6_9EIME3.030e-4046.99uncharacterized protein LOC113146779 n=1 Tax=Cyclo... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5975contigL-elsbetiae_contig5975:460..4109 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score311.2
Seed ortholog evalue2.9e-82
Seed eggNOG ortholog2880.D7FNE8
KEGG koko:K16815
Hectar predicted targeting categorymitochondrion
EggNOG free text desc.phosphatidylethanolamine catabolic process
EggNOG OGsKOG4231@1,KOG4231@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000
Ec32 ortholog descriptionPatatin/Phospholipase A2-related
Ec32 orthologEc-22_001470.1
Exons4
Model size513
Cds size513
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5975.14472.1prot_L-elsbetiae_contig5975.14472.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig5975 460..4109 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816647.7494013-CDS-L-elsbetiae_contig5975:459..6271622816647.7494013-CDS-L-elsbetiae_contig5975:459..627Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5975 460..627 +
1691683710.4979012-CDS-L-elsbetiae_contig5975:459..6271691683710.4979012-CDS-L-elsbetiae_contig5975:459..627Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5975 460..627 +
1622816647.7621164-CDS-L-elsbetiae_contig5975:1397..15141622816647.7621164-CDS-L-elsbetiae_contig5975:1397..1514Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5975 1398..1514 +
1691683710.510952-CDS-L-elsbetiae_contig5975:1397..15141691683710.510952-CDS-L-elsbetiae_contig5975:1397..1514Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5975 1398..1514 +
1622816647.776239-CDS-L-elsbetiae_contig5975:1851..20191622816647.776239-CDS-L-elsbetiae_contig5975:1851..2019Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5975 1852..2019 +
1691683710.5205011-CDS-L-elsbetiae_contig5975:1851..20191691683710.5205011-CDS-L-elsbetiae_contig5975:1851..2019Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5975 1852..2019 +
1622816647.7870672-CDS-L-elsbetiae_contig5975:4049..41091622816647.7870672-CDS-L-elsbetiae_contig5975:4049..4109Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5975 4050..4109 +
1691683710.5300612-CDS-L-elsbetiae_contig5975:4049..41091691683710.5300612-CDS-L-elsbetiae_contig5975:4049..4109Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5975 4050..4109 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig5975.14472.1

>prot_L-elsbetiae_contig5975.14472.1 ID=prot_L-elsbetiae_contig5975.14472.1|Name=mRNA_L-elsbetiae_contig5975.14472.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=171bp
HHLRYYGSFRYMVRQAIRATTAAPSFFAPLMINGALYSDGALLCNNPSAV
AVHEAKHVFPGVPVEMVVSIGTGCFFEEKREFLEPALGWDGIINQVIASA
TETEITTDIVSDLLPPEQFFRFNPRMEDMPIDEVRKERLDGLKTLADEYF
EIPENQARLQEMAERMLPDL*
back to top

mRNA from alignment at L-elsbetiae_contig5975:460..4109+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig5975.14472.1 ID=mRNA_L-elsbetiae_contig5975.14472.1|Name=mRNA_L-elsbetiae_contig5975.14472.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3650bp|location=Sequence derived from alignment at L-elsbetiae_contig5975:460..4109+ (Laminarionema elsbetiae ELsaHSoW15)
CATCATCTCAGGTACTACGGGAGCTTCAGGTACATGGTGCGGCAGGCCAT TCGCGCCACGACGGCAGCGCCCTCGTTTTTCGCGCCGCTCATGATCAATG GGGCTCTCTATTCGGACGGCGCCCTCCTTTGCAACAACCCCTCCGCCGTC GCCGTCCACGAAGCCAAGGTGTGTAAACGCAGCGAGTGCACTTTGTTCAC GATGTTTTTAAGCGAGGTATACTGTGAAAGCATTGCACTTTGTTCGCGAT GTTTTTTAAGCAAGGGTGTATTGTAAAAGCATTGCACTTTGTTCGCGATG TTTTTTAAGCAAGGTAGGCATTGTAAAAGCACTGCACTTTGTTCGCGATA TTTTTTAAGCAAAAATGTTCCACGTATTCTAAAAACGTATGTATGCAAGG TCCATTTTATTTTTCGTGTACCTTTTCTTTTAGGTATAAGTTAGCCTGTT ACCACGGGAATTGACCGCATCAAGTGTTGGAGTAGTACGGACATTGAGAG GTACTGGATGGAGAGATCGGAACGGTTTTTAATGTGAAGACAACATACAT ACAACACACATGCAAGCGGTCTCAGTGTCCAGCCTGCTGTGAAGAAAGTC GTTACAGGGGGACTGCTGTTGGGACTAGACAGGCACACTACATATGTAGC CCGGCCTCGCCGTCCCAGGGGTATGGGCACAAGGTTCGCAATCCGTGTTA TGTATAATTTATTGCCTATTTTCTGGATCAGGTTCTCTGTCACAAGCATG GTGGTGCACACGATCTTGTCGGTTTCGGATGTGATTAGGTCCTCCTCATG GAGCTTTCGATGCCTTCGTGTTGCTTCTGCTGAACATCAGTACTCCATTC GTCCCGGGATGCCCCCCTCTCCTTATTGTACTCCCCGCGGGCATGCCCTT GAAAATGAAAACCAAACAACACTGCTGTATCGCCGCAGCACGTGTTCCCG GGAGTTCCTGTAGAGATGGTCGTGTCCATCGGCACGGGCTGTTTTTTCGA GGAGAAGAGAGAGTTCCTGGAGCCGGCACTGGGCTGGGACGGCATCATCA ACCAGGTATCTATGTAAAACAATGCTGATTATATATATTTTTATATATAT TCTCAGAGTTTTTTGTCACCAGAGTTGATTTACCCCGGAGCTCCCCCCTG CGTTTCAGCGCAGAGGATTTTCAGTATTCTATACCGTTTTTAGGTAAGTT ATCCTGTGACCACGGGAATCGACCGCCTTAGTGTTGGATTAGTATGGACT CATGGAGGTGTACTGGACAGAGAGATCGGAATGGTTTTTAATGTTAAGAC AACACTACTAAACACAGTAATAAGAAAACACAAGAGCCACCTAGAAAACG AAATGAAAAACGCGCTTGCGGCAACAAAAACGCCTCCATCAGGTGATCGC GAGCGCCACAGAGACGGAGATCACGACAGACATCGTCTCGGACCTGCTGC CGCCGGAGCAGTTCTTCCGCTTCAACCCCCGCATGGAAGACATGCCGATC GACGAGGTGCGGAAGGAGCGGCTCGACGGGCTCAAGACCCTGGCCGACGA GTATTTCGAGGTAATTCATGTACTTGAAAGCAAGGGGCCTCCCAGAATTC AGGCTGGCACCACAGCTATAAAACATCGATGTTCTGTAGGTATGGGGGAT GGAGATGTTCTGTAGGTATGGGGGATGGAGATGTTCTGTAGGTATGGGGG ATGGAGATGTTCTGTAGGTATGGGGGATGGAGAGGGGCGGCCCGGCTGGC TCAAGGCGCTCGCTGACGAGTGTTTTGAGGTAAAATCATGTGTCAGGCAG CACGCGTAACCGAAAAAAACAAAAGAGTACAGAGTCGGGTGGTGTCTGGT ATGTACCCTGTAGTACAAGACTCCCTTTCAGACGTTACTCATGGATAAAC GCTCCCGGGGGTGAAGCAACAGAGCAGACCAAGCGTCCGGTACCTGGATG CTAAAACAAAATACCGCTGGAAGAGGCTGAAAAACTAACTTTGTCCAGCA GCTGTTGAGGCTGTTCAAGCTCAACAAACAGCAGCTGTTTAAAGCTGTTT GAGCGTAAGGAGGACATAAACCTCAAACAGCCGGGCTGCTCTAACTACAA CAGCTCCCGTAGTCTTCTGAGATTAGGCAGCTCTGTTTGCGCAAGAATCT GTCTCTCAACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCGCT GTACAAATTGTGCCATGCCAAGGGTTTACGCTGTTGGTGCGACCGATCGA CGTGTGTCTGCTTCCCCTCTTCGTAGTTCGAAAACACGCCTCTGTACATG TTTATTACCCCAAATTACTCAGGTCCTCGTCGGAGTGTGAGGTAAACACC TCGTTTTTTTTTGTTTTCACATTTATATCGAGTGCTCGATAGGCTCCTTG CCACGAGGGCATCTTGCCAGAGTACTGAACCGTGGTTACACGTAAGCATT CCTTTCCCCGAGGCCCCCACTCCCCCGTTCAAGCTGCAGGAACAAAATCC GCAATCCGCACAAAATAGTTATTGCTGGTGACGTTTTTGTTTTGTCTCTT TGAAATCGAAGTCGAGGTCGAAGTCGAAGTCGAGTAGATAACACACCTAC TTCGACTCCATTGTTGACGAGAGTGGGGGGTGCTGACCTGAACCCTGCTC GCGATAAACATAACAGGCAGGCACCGCAGGAGCCCCCCCCCCCCTCCTTT GTGACCCCCGGTTGGGTCGTCTAGCTAGTCGTAGTGGAGTATGGGGGCCA GTGGGGCAGACGCCGAATACCGTAATCATGCGGAGGTTCGCACCCCCGTG TTAGTATTTTTCTAAAGCGTATTTCTCTCCACAACCAGGAGGGTGCGAAC ACTAACTGATACCTCTCTGGAAAGCCCCCGACGAGACGTTTCGAAAACCA CCCTTTTCGGCAGTGGTACCCTCCTGGTTGTAGAGAAATACGCTATAGAA AAACACGGGGGTGCGAACCTTCGCATGACTACGGTAAACCAATAATGGGA GGAAAAAAGCAAAAACACATGTCCATCCACCCGGCGGGCCCCCTCCAGAC TCTCTCTCTCTTCTCGTACGTCAGGAACACCACATGTTAAAATTATATCG CTTTATCGACTCGCTTTGGTTCATTGTATACTCAGTCATATATATATATA TGTATGTGTGTGTTGTCTTGACATTAAAAACCGTTTCGATCTCTCCATCC AGTACCTCTCAATGTCCGTACTACCTAATCCAACACTTGATGCGGTCAAT TCCCGTGGTCACAGGCTAACTTGTACCCAAGAAAAGGCACACGAAAAATA AAATGGACATAAGGAACCTCTATAGGTGCGTATCTTAATCTGTCACGACG GGGTCGACCACATCTTCCGTTGGGCGAGTCATACACAGCGGACACATGAA GGTACAGGCGGACGAGGGTATTGAGCAAAGAGATCGTACAGACGGACGAG GGTACTGAGCAAAAGAGATCGGAACGGTTTTTGAGGCGACATCGTCAACA ACAACAACAACAGTAACAATAACAACTCCGCACTCATGCGCTCACGCGCC CCCTACAATCGCTCCCCCCCCTCTCCCCCCCCCCACCCAGATACCCGAGA ACCAGGCACGCCTTCAAGAGATGGCGGAAAGGATGCTCCCCGACTTGTAA
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig5975:460..4109+

>mRNA_L-elsbetiae_contig5975.14472.1 ID=mRNA_L-elsbetiae_contig5975.14472.1|Name=mRNA_L-elsbetiae_contig5975.14472.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1026bp|location=Sequence derived from alignment at L-elsbetiae_contig5975:460..4109+ (Laminarionema elsbetiae ELsaHSoW15)
CATCATCTCAGGTACTACGGGAGCTTCAGGTACATGGTGCGGCAGGCCAT
TCGCGCCACGACGGCAGCGCCCTCGTTTTTCGCGCCGCTCATGATCAATG
GGGCTCTCTATTCGGACGGCGCCCTCCTTTGCAACAACCCCTCCGCCGTC
GCCGTCCACGAAGCCAAGCATCATCTCAGGTACTACGGGAGCTTCAGGTA
CATGGTGCGGCAGGCCATTCGCGCCACGACGGCAGCGCCCTCGTTTTTCG
CGCCGCTCATGATCAATGGGGCTCTCTATTCGGACGGCGCCCTCCTTTGC
AACAACCCCTCCGCCGTCGCCGTCCACGAAGCCAAGCACGTGTTCCCGGG
AGTTCCTGTAGAGATGGTCGTGTCCATCGGCACGGGCTGTTTTTTCGAGG
AGAAGAGAGAGTTCCTGGAGCCGGCACTGGGCTGGGACGGCATCATCAAC
CAGCACGTGTTCCCGGGAGTTCCTGTAGAGATGGTCGTGTCCATCGGCAC
GGGCTGTTTTTTCGAGGAGAAGAGAGAGTTCCTGGAGCCGGCACTGGGCT
GGGACGGCATCATCAACCAGGTGATCGCGAGCGCCACAGAGACGGAGATC
ACGACAGACATCGTCTCGGACCTGCTGCCGCCGGAGCAGTTCTTCCGCTT
CAACCCCCGCATGGAAGACATGCCGATCGACGAGGTGCGGAAGGAGCGGC
TCGACGGGCTCAAGACCCTGGCCGACGAGTATTTCGAGGTGATCGCGAGC
GCCACAGAGACGGAGATCACGACAGACATCGTCTCGGACCTGCTGCCGCC
GGAGCAGTTCTTCCGCTTCAACCCCCGCATGGAAGACATGCCGATCGACG
AGGTGCGGAAGGAGCGGCTCGACGGGCTCAAGACCCTGGCCGACGAGTAT
TTCGAGATACCCGAGAACCAGGCACGCCTTCAAGAGATGGCGGAAAGGAT
GCTCCCCGACTTGTAAATACCCGAGAACCAGGCACGCCTTCAAGAGATGG
CGGAAAGGATGCTCCCCGACTTGTAA
back to top