mRNA_L-elsbetiae_contig5974.14471.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5974.14471.1 vs. uniprot
Match: D7FHZ3_ECTSI (DNA-directed RNA polymerase subunit beta n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHZ3_ECTSI) HSP 1 Score: 1478 bits (3827), Expect = 0.000e+0 Identity = 740/763 (96.99%), Postives = 747/763 (97.90%), Query Frame = 1 Query: 31 YFQGSQHSKVNGGHIRAQLPYIRTDVPVVLVFRALGYTNDKAILEHIVYDFSDTDMMEKFRPSLEEADVIQNQVVAQDFIGKRGSAVNVGRNERINYAKGLLQREFLPHVGIGAGTEAKKVFFLGYMVHKLLMCSLGRLEEDDRDHYGKKRLDLAGALLAGLFRQLFRKLTQNVRKYLQLCLDKGTQFVVGTAIKSQFITDGLKYSLATGNWGDKKTATKAGVSQVLNRLTYASALSHLRRLNTPLGREGKQARTREDDGHNGAKPRQLHNTHWGFICPAETPEGQAVGLVKNLALMAYISVGCSLSPILEFLEEWAMENLDEIAPHMIAQTNCTKVFVNGNWVGVHRDPNRLVQTLVHQRRALDIDVEVSVVRDIKGRELRLYTDAGRVCRPLFVVENNRLRIRKKHINDLHDPNYGWTNLMQQGVVEYIDTEEEETTMVAMEPKDLEESGGYSSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQLRMDTLAHVLHYPEKPLVTTRAMEHLHFRELPSGVNVIVGIMVYSGYNQEDSLIMNQSAVDRGLFRSSFFRTLNDQEKAGRGIGDMAVLSAESFERPARENTAGMKHGNYDKLEDDGLVAPGTRVSGTDVLIGKTTPLGGGGGASGVTGGPGNRSKKDSSTVMRSHEDGIVDRVMLSTNQEGFKFCKVRIRNVRVPQIGDKFASRHGQKGTIGMTYRQEDMPWSIDGIVPDIIVNPHAIPSRMTIAQLIECLLGKVG 2319 Y +G+QHSKVNGGHIRAQLPYIRTDVPVVLVFRALGYTNDKAILEHIVYDFSDTDMMEKFRPSLEEADVIQNQVVAQDFIGKRGSAVNVGRNERINYAKGLLQREFLPHVGIGAGTEAKKVFFLGYMVHKLLMCSLGRLEEDDRDHYGKKRLDLAGALLAGLFRQLFRKLTQNVRKYLQLCLDKGTQFVVGTAIKSQFITDGLKYSLATGNWGDKKTATKAGVSQVLNRLTYASALSHLRRLNTPLGREGKQA KPRQLHNTHWGFICPAETPEGQAVGLVKNLALMAYISVGCSLSPILEFLEEWAMENLDEIAPHMIAQTNCTKVFVNGNWVGVHRDPNRLVQTLVHQRRALDIDVEVSVVRDIKGRELRLYTDAGRVCRPLFVVENNRLRIRKKHINDLHDPNYGWTNLMQQGVVEYIDTEEEETTMVAMEPKDLEESGGYSSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQLRMDTLAHVLHYPEKPLVTTRAMEHLHFRELPSG NVIVGIMVYSGYNQEDSLIMNQSAVDRGLFRSSFFRTLNDQEKAGRG+GDMAVLSAESFERPARENTAGMKHGNYDKLE+DGLVAPGTRVSGTDVLIGKTTPLGGG +GVTGGPG+RSKKDSSTVMRSHEDGIVDRVML+TNQEGFKFCKVRIRNVRVPQIGDKFASRHGQKGTIGMTYRQEDMPWSIDGIVPDIIVNPHAIPSRMTIAQLIECLLGKVG Sbjct: 335 YAKGTQHSKVNGGHIRAQLPYIRTDVPVVLVFRALGYTNDKAILEHIVYDFSDTDMMEKFRPSLEEADVIQNQVVAQDFIGKRGSAVNVGRNERINYAKGLLQREFLPHVGIGAGTEAKKVFFLGYMVHKLLMCSLGRLEEDDRDHYGKKRLDLAGALLAGLFRQLFRKLTQNVRKYLQLCLDKGTQFVVGTAIKSQFITDGLKYSLATGNWGDKKTATKAGVSQVLNRLTYASALSHLRRLNTPLGREGKQA-----------KPRQLHNTHWGFICPAETPEGQAVGLVKNLALMAYISVGCSLSPILEFLEEWAMENLDEIAPHMIAQTNCTKVFVNGNWVGVHRDPNRLVQTLVHQRRALDIDVEVSVVRDIKGRELRLYTDAGRVCRPLFVVENNRLRIRKKHINDLHDPNYGWTNLMQQGVVEYIDTEEEETTMVAMEPKDLEESGGYSSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQLRMDTLAHVLHYPEKPLVTTRAMEHLHFRELPSGFNVIVGIMVYSGYNQEDSLIMNQSAVDRGLFRSSFFRTLNDQEKAGRGMGDMAVLSAESFERPARENTAGMKHGNYDKLEEDGLVAPGTRVSGTDVLIGKTTPLGGG--VAGVTGGPGHRSKKDSSTVMRSHEDGIVDRVMLTTNQEGFKFCKVRIRNVRVPQIGDKFASRHGQKGTIGMTYRQEDMPWSIDGIVPDIIVNPHAIPSRMTIAQLIECLLGKVG 1084
BLAST of mRNA_L-elsbetiae_contig5974.14471.1 vs. uniprot
Match: A0A835YQ41_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ41_9STRA) HSP 1 Score: 1190 bits (3079), Expect = 0.000e+0 Identity = 583/765 (76.21%), Postives = 661/765 (86.41%), Query Frame = 1 Query: 31 YFQGSQHSKVNGGHIRAQLPYIRTDVPVVLVFRALGYTNDKAILEHIVYDFSDTDMMEKFRPSLEEADVIQNQVVAQDFIGKRGSAVNVGRNERINYAKGLLQREFLPHVGIGAGTEAKKVFFLGYMVHKLLMCSLGRLEEDDRDHYGKKRLDLAGALLAGLFRQLFRKLTQNVRKYLQLCLDKGTQFVVGTAIKSQFITDGLKYSLATGNWGDKKTATKAGVSQVLNRLTYASALSHLRRLNTPLGREGKQARTREDDGHNGAKPRQLHNTHWGFICPAETPEGQAVGLVKNLALMAYISVGCSLSPILEFLEEWAMENLDEIAPHMIAQTNCTKVFVNGNWVGVHRDPNRLVQTLVHQRRALDIDVEVSVVRDIKGRELRLYTDAGRVCRPLFVVENNRLRIRKKHINDL--HDPNYGWTNLMQQGVVEYIDTEEEETTMVAMEPKDLEESGGYSSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQLRMDTLAHVLHYPEKPLVTTRAMEHLHFRELPSGVNVIVGIMVYSGYNQEDSLIMNQSAVDRGLFRSSFFRTLNDQEKAGRGIGDMAVLSAESFERPARENTAGMKHGNYDKLEDDGLVAPGTRVSGTDVLIGKTTPLGGGGGASGVTGGPGNRSKKDSSTVMRSHEDGIVDRVMLSTNQEGFKFCKVRIRNVRVPQIGDKFASRHGQKGTIGMTYRQEDMPWSIDGIVPDIIVNPHAIPSRMTIAQLIECLLGKVG 2319 Y +G +HS++ GG IR LPY+RTDVP+VL+FRALG+ NDK ILEHIVYDFSD +MMEKFRPSLEEADVIQ++ +A DFIGKRGSA NVGRNERI YAKGLLQ+E LPHVG +E KK FFLGY+VHKLLMCSLGRLEEDDRDHYGKKRLDLAG L+AGLFR Q CLD+G FV+G AIKS IT+GL+YSLATGNWGD+KTATKAGVSQVLNRLTYASALSHLRRLNTPLGREGKQA KPRQLHNTHWG ICPAETPEGQAVGLVKNLALMAYISVGC+LSPILEFLEEWA ENL+EI+P IA+ CTK+FVNGNW+G+HR+PN+LV+TLV QRR LDID EVSVVRDIK RELRLYTDAGR+CRPLFVV+NN+L IRK HI+DL + Y WT+LMQ GVVEY+DTEEEETTM+AM+P DL GGYS+TYTHCEIHPSMILG+CASIIPFPDHNQSPRNTYQSAMGKQAMG+YASNYQ+RMDTLAHVLHYP KPLV TR+MEHLHFRELPSGVNV+V IM Y+GYNQEDSLIMNQSA+DRGLFRSS+FR++ D+EKAG G+G+MA+LSAE FERP ++ +G + G+YDKL+ DGLV+PGTRVSG+D++IGKTTPL GG A G+T G SK+DSST M++HE G +D+VML+TNQEGFKFCKVRIRNVRVPQIGDKFASRHGQKGTIGMTYRQEDMP+S++GI PD+I+NPHAIPSRMTIA LIE L+GK G Sbjct: 246 YVKGPKHSQIAGGQIRTTLPYVRTDVPIVLIFRALGFVNDKTILEHIVYDFSDAEMMEKFRPSLEEADVIQSRTLALDFIGKRGSAANVGRNERIQYAKGLLQKEVLPHVGTDEASETKKGFFLGYVVHKLLMCSLGRLEEDDRDHYGKKRLDLAGPLVAGLFRTXXXXXXXXXXXXXQKCLDEGRGFVLGVAIKSNTITNGLRYSLATGNWGDQKTATKAGVSQVLNRLTYASALSHLRRLNTPLGREGKQA-----------KPRQLHNTHWGMICPAETPEGQAVGLVKNLALMAYISVGCALSPILEFLEEWATENLEEISPSTIAEKQCTKIFVNGNWIGIHREPNQLVRTLVIQRRCLDIDAEVSVVRDIKERELRLYTDAGRICRPLFVVQNNKLVIRKSHIHDLVSNPEEYNWTSLMQAGVVEYVDTEEEETTMIAMDPSDLAAGGGYSTTYTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQAMGVYASNYQVRMDTLAHVLHYPMKPLVCTRSMEHLHFRELPSGVNVVVAIMCYTGYNQEDSLIMNQSAIDRGLFRSSYFRSIVDKEKAGSGVGEMALLSAEQFERPNKDQCSGSRSGSYDKLDADGLVSPGTRVSGSDIIIGKTTPLAQGG-AGGLTAGVNRFSKRDSSTAMKAHESGTIDQVMLTTNQEGFKFCKVRIRNVRVPQIGDKFASRHGQKGTIGMTYRQEDMPFSVEGITPDLIINPHAIPSRMTIAHLIETLMGKFG 998
BLAST of mRNA_L-elsbetiae_contig5974.14471.1 vs. uniprot
Match: F0YIN3_AURAN (DNA-directed RNA polymerase subunit beta n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YIN3_AURAN) HSP 1 Score: 1062 bits (2746), Expect = 0.000e+0 Identity = 531/758 (70.05%), Postives = 615/758 (81.13%), Query Frame = 1 Query: 64 GGHIRAQLPYIRTDVPVVLVFRALGYTNDKAILEHIVYDFSDTDMMEKFRPSLEEADVIQNQVVAQDFIGKRGSAVNVGRNERINYAKGLLQREFLPHVGIGAGTEAKKVFFLGYMVHKLLMCSLGRLEEDDRDHYGKKRLDLAGALLAGLFRQLFRKLTQNVRKYLQLCLDKGTQFVVGTAIKSQFITDGLKYSLATGNWGDKKTATKAGVSQVLNRLTYASALSHLRRLNTPLGREGKQARTREDDGHNGAKPRQLHNTHWGFICPAETPEGQAVGLVKNLALMAYISVGCSLSPILEFLEEWAMENLDEIAPHMIAQTNCTKVFVNGNWVGVHRDPNRLVQTLVHQRRALDIDVEVSVVRDIKGRELRLYTDAGRVCRPLFVVEN---NRLRIRKKHINDLHDPNYGWTNLMQQGVVEYIDTEEEETTMVAMEPKDLEESGGYSSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQLRMDTLAHVLHYPEKPLVTTRAMEHLHFRELPSGVNVIVGIMVYSGYNQEDSLIMNQSAVDRGLFRSSFFRTLNDQEKAGRGIGDMAVLSAESFERPARENTAGMKHGNYDKLEDDGLVAPGTRVSGTDVLIGKT---TPLGGGGGASGVTGGPGNRSKKDSSTVMRSHEDGIVDRVMLSTNQEGFKFCKVRIRNVRVPQIGDKFASRHGQKGTIGMTYRQEDMPWSIDGIVPDIIVNPHAIPSRMTIAQLIECLLGKVG 2319 G IR LPYIR DVPV++VFRALG+ D+ ILEH+VYDFSDT+MME+ RPSL+EA V+QNQ +A DFIG+RGSA N+GR++R+ YAK LLQ+E LPHVG ++ KK FF+GY+VHKLLMCSL R++EDDRDHYGKKRLDLAG LL GLFR LFRKLT++V YLQ C+D+G F + +AIKS+ ITDGL+YSLATGNWGD+K A++AGVSQVLNRLTYAS LSHLRRLNTPLGREGKQA KPRQLHNTHWGFICPAETPEGQAVGLVKNLALM+Y+SVG SPILEFLEEW+MENL+EI+P IA TK+FVNG+WVGVHRDP+ L TL RR +DID EVSVVRDIK +ELR+YTDAGRVCRPL ++ LR+RK HI L + GWT L+ +G+VE +DTEEEETTM+AM P DL E+ YSSTYTHCEIHPSMILG+C SIIPFPDHNQSPRNTYQSAMGKQAMGIYASN+Q RMDTL+HVLHYP+KPL TTRAMEHLHFRELPSGVN IV IM Y+GYNQEDSLIMNQ+A+DRGLFRS+F+RT DQE RG+G+ E+FERP R+ M+HG+YDK++ DGLVAPG RVSG D+LIGKT TPLG G + +K+DSST MR +E G+VD+VMLSTNQEG KF KVR R +R+PQIGDKFASRHGQKGTIGMTY QEDMPW+ DG+ PDI+VNPHAIPSRMTI L+ECL KVG Sbjct: 204 GNQIRMTLPYIRVDVPVIIVFRALGFVADRDILEHVVYDFSDTEMMEQLRPSLDEAFVVQNQTIALDFIGRRGSATNIGRSKRVQYAKELLQKEVLPHVGTEEQSDTKKAFFVGYIVHKLLMCSLERIDEDDRDHYGKKRLDLAGPLLGGLFRMLFRKLTKDVLAYLQKCIDEGRDFNLASAIKSRVITDGLRYSLATGNWGDRKDASRAGVSQVLNRLTYASTLSHLRRLNTPLGREGKQA-----------KPRQLHNTHWGFICPAETPEGQAVGLVKNLALMSYVSVGSPQSPILEFLEEWSMENLEEISPQTIADPGTTKIFVNGSWVGVHRDPSTLESTLRSLRRQIDIDPEVSVVRDIKEKELRIYTDAGRVCRPLLIISKFSRQELRLRKSHIQKLVNGELGWTQLLVKGLVELVDTEEEETTMIAMVPSDLNET--YSSTYTHCEIHPSMILGICGSIIPFPDHNQSPRNTYQSAMGKQAMGIYASNFQQRMDTLSHVLHYPQKPLATTRAMEHLHFRELPSGVNAIVAIMCYTGYNQEDSLIMNQAAIDRGLFRSTFYRTYVDQESI-RGLGE---AFHETFERPTRDQCTAMRHGSYDKVDCDGLVAPGLRVSGADILIGKTAPTTPLGMDGNLNHCQ-----FTKQDSSTAMRPNESGLVDQVMLSTNQEGMKFTKVRTRTIRIPQIGDKFASRHGQKGTIGMTYSQEDMPWTRDGVSPDIVVNPHAIPSRMTIGHLVECLQSKVG 939
BLAST of mRNA_L-elsbetiae_contig5974.14471.1 vs. uniprot
Match: B8C598_THAPS (DNA-directed RNA polymerase subunit beta n=2 Tax=Bacillariophyta TaxID=2836 RepID=B8C598_THAPS) HSP 1 Score: 1061 bits (2744), Expect = 0.000e+0 Identity = 523/769 (68.01%), Postives = 622/769 (80.88%), Query Frame = 1 Query: 34 FQGSQHSKVNGGHIRAQLPYIRTDVPVVLVFRALGYTNDKAILEHIVYDFSDTDMMEKFRPSLEEADVIQNQVVAQDFIGKRGSAVNVGRNERINYAKGLLQREFLPHVGIGAGTEAKKVFFLGYMVHKLLMCSLGRLEEDDRDHYGKKRLDLAGALLAGLFRQLFRKLTQNVRKYLQLCLDKGTQFVVGTAIKSQFITDGLKYSLATGNWGDKKTATKAGVSQVLNRLTYASALSHLRRLNTPLGREGKQARTREDDGHNGAKPRQLHNTHWGFICPAETPEGQAVGLVKNLALMAYISVGCSLSPILEFLEEWAMENLDEIAPHMIAQTNCTKVFVNGNWVGVHRDPNRLVQTLVHQRRALDIDVEVSVVRDIKGRELRLYTDAGRVCRPLFVVENNRLRIRKKHINDLH-----DPNYGWTNLMQQGVVEYIDTEEEETTMVAMEPKDLEESGG--YSSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQLRMDTLAHVLHYPEKPLVTTRAMEHLHFRELPSGVNVIVGIMVYSGYNQEDSLIMNQSAVDRGLFRSSFFRTLNDQEKAGRGIGDMAVLSAESFERPARENTAGMKHGNYDKLEDDGLVAPGTRVSGTDVLIGKTTPLGGGGGASGVTGGPGNRSKKDSSTVMRSHEDGIVDRVMLSTNQEGFKFCKVRIRNVRVPQIGDKFASRHGQKGTIGMTYRQEDMPWSIDGIVPDIIVNPHAIPSRMTIAQLIECLLGKVG 2319 +Q + G IR+ LPYIRTD+PVV++FRALGY D+ I+EH+VYD +D +MM+ FRPSLEEA VIQ Q VA DFIG+RGSA +V +++RI YA G+LQ+E LPHVG E KK FFLGY VHKLLMC LGR +EDDRDH+GKKRLDLAG LL GLFR LFRKLT++VRK+LQ CLD+G F +G AIKS I+DGLKYSLATGNWGDK +KAGVSQVLNRLTYAS+LSHLRR NTPL R GKQA KPRQLHN+HWG +CPAETPEGQAVGLVKN+ALMAYI+ G S P++EFLEE++ ENL +I P +IA+ N K+FVNGNWVG+HRDP +LV T RR +DID EVS+VRDI E+R+YTDAGR+CRPLF+V + L I+K HI+ L WT+L+ +G+VEY+DTEEEETTM+AMEPKDL+ + G YS+TYTHCEIHPSMILG+CASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQ+RMDT+AHVLHYP+KPL TTRAME LHFRELPSGVNV+V IM+Y+GYNQEDSLIMNQSA+DRGLFRSS++R NDQEK+ +G + L++E FERPA +N GMK G+Y KL+DDGLV+PGTRVSG DVLIGKT P+ + P +K+D ST M+++E+GIVD V++ST +EG++F KVRIRNVR+PQ+GDKFASRHGQKGTIGMTYRQEDMP++ +GIVPDIIVNPHAIPSRMTIAQLIEC+LGKV Sbjct: 251 YQKGGKGAIEGNQIRSTLPYIRTDIPVVIIFRALGYVADRDIIEHVVYDLTDGEMMDLFRPSLEEAFVIQKQEVALDFIGRRGSARDVTKDDRIRYAAGILQKEVLPHVGTEEHCETKKGFFLGYAVHKLLMCKLGRADEDDRDHFGKKRLDLAGPLLGGLFRVLFRKLTKDVRKHLQRCLDEGKHFNIGAAIKSNHISDGLKYSLATGNWGDKGNTSKAGVSQVLNRLTYASSLSHLRRSNTPLARTGKQA-----------KPRQLHNSHWGMVCPAETPEGQAVGLVKNMALMAYITTGTSQVPVMEFLEEFSTENLTDILPSVIAEPNTCKIFVNGNWVGIHRDPKQLVHTFRSLRRMIDIDAEVSIVRDIPESEVRIYTDAGRICRPLFIVTDQELAIKKHHISQLQGVSPDQKKLTWTDLLMEGLVEYVDTEEEETTMIAMEPKDLDMTVGEPYSTTYTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQVRMDTMAHVLHYPQKPLCTTRAMEFLHFRELPSGVNVVVAIMIYTGYNQEDSLIMNQSAIDRGLFRSSYYRCYNDQEKSS-SVGSVGALNSEFFERPAFDNCKGMKTGDYGKLDDDGLVSPGTRVSGDDVLIGKTAPM------DAIANTPSRYTKRDCSTSMKANENGIVDNVLISTTKEGYRFTKVRIRNVRIPQVGDKFASRHGQKGTIGMTYRQEDMPFTCEGIVPDIIVNPHAIPSRMTIAQLIECILGKVA 1001
BLAST of mRNA_L-elsbetiae_contig5974.14471.1 vs. uniprot
Match: A0A1E7ERG7_9STRA (DNA-directed RNA polymerase subunit beta n=6 Tax=Bacillariophyta TaxID=2836 RepID=A0A1E7ERG7_9STRA) HSP 1 Score: 1060 bits (2742), Expect = 0.000e+0 Identity = 526/766 (68.67%), Postives = 618/766 (80.68%), Query Frame = 1 Query: 34 FQGSQHSKVNGGHIRAQLPYIRTDVPVVLVFRALGYTNDKAILEHIVYDFSDTDMMEKFRPSLEEADVIQNQVVAQDFIGKRGSAVNVGRNERINYAKGLLQREFLPHVGIGAGTEAKKVFFLGYMVHKLLMCSLGRLEEDDRDHYGKKRLDLAGALLAGLFRQLFRKLTQNVRKYLQLCLDKGTQFVVGTAIKSQFITDGLKYSLATGNWGDK-KTATKAGVSQVLNRLTYASALSHLRRLNTPLGREGKQARTREDDGHNGAKPRQLHNTHWGFICPAETPEGQAVGLVKNLALMAYISVGCSLSPILEFLEEWAMENLDEIAPHMIAQTNCTKVFVNGNWVGVHRDPNRLVQTLVHQRRALDIDVEVSVVRDIKGRELRLYTDAGRVCRPLFVVENNRLRIRKKHINDLH----DPNYGWTNLMQQGVVEYIDTEEEETTMVAMEPKDLEESGGYSSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQLRMDTLAHVLHYPEKPLVTTRAMEHLHFRELPSGVNVIVGIMVYSGYNQEDSLIMNQSAVDRGLFRSSFFRTLNDQEKAGRGIGDMAVLSAESFERPARENTAGMKHGNYDKLEDDGLVAPGTRVSGTDVLIGKTTPLGGGGGASGVTGGPGNRSKKDSSTVMRSHEDGIVDRVMLSTNQEGFKFCKVRIRNVRVPQIGDKFASRHGQKGTIGMTYRQEDMPWSIDGIVPDIIVNPHAIPSRMTIAQLIECLLGKV 2316 +Q + G IR+ LPYIRTDVPVV++FRALGY D+ I+EH+VYD +D +MM+ FRPSLEEA VIQ Q VA DFIG+RGSA +V +++RI YA +LQ+E LPHVG+ E KK FF+GY VHKLL C LGR EEDDRDH+GKKRLDLAG LL GLFR LFRKLT +VR++LQ CLD+G F +G AIKS +TDGLKYSLATGNWGDK +A KAGVSQVLNRLTYAS+LSHLRR NTPL R GKQA KPRQLHNTHWG +CPAETPEGQAVGLVKNLALMAYI+ G + P++EFLEE++ ENL +I P ++A+ N K+FVNGNWVGVHRDP LV T RR +DID EVS+VRDI +E+R+YTDAGR+CRPLFVV+ +L I+K+HI L + WT+L+ +G+VEYIDTEEEETTMVAM+P DL YSSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQ+RMDT+AHVLHYP+KPL TTRAME LHFRELPSGVN IVGI+VY+GYNQEDSLIMNQSA+DRGLFRSS++R DQEKA +G + L++E FE+P ++ T GMKHG Y KL++DGLVAPGTRVSG D+LIGKT P+ T P +K+D ST M+++E+GIVD V++ST +EG++F KVRIRNVR PQ+GDKFASRHGQKGTIGMTYRQEDMP++++GIVPDIIVNPHAIPSRMTIAQLIECLLGKV Sbjct: 251 YQKGGRGAIEGNQIRSTLPYIRTDVPVVVIFRALGYVADRDIIEHVVYDLTDGEMMDMFRPSLEEAFVIQRQEVALDFIGRRGSARDVTKDDRIRYASAILQKEVLPHVGVEEHCETKKGFFIGYAVHKLLSCKLGRAEEDDRDHFGKKRLDLAGPLLGGLFRLLFRKLTLDVRRHLQRCLDEGKHFNIGAAIKSNHVTDGLKYSLATGNWGDKGASAPKAGVSQVLNRLTYASSLSHLRRCNTPLARTGKQA-----------KPRQLHNTHWGMVCPAETPEGQAVGLVKNLALMAYITTGTAQVPVMEFLEEFSTENLTDILPSVVAEPNTCKIFVNGNWVGVHRDPRALVDTFRSLRRMVDIDAEVSIVRDIAAKEVRIYTDAGRICRPLFVVQEQQLVIKKQHIMQLQGLSGEKKLTWTDLLMEGIVEYIDTEEEETTMVAMDPVDLNADESYSSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQVRMDTMAHVLHYPQKPLCTTRAMEFLHFRELPSGVNCIVGILVYTGYNQEDSLIMNQSAIDRGLFRSSYYRCYIDQEKAS-SVGTLGTLNSEIFEKPTQDKTRGMKHGEYGKLDEDGLVAPGTRVSGDDILIGKTAPM------DSSTNMPSRYTKRDCSTSMKANENGIVDNVLISTTKEGYRFTKVRIRNVRTPQVGDKFASRHGQKGTIGMTYRQEDMPFTVEGIVPDIIVNPHAIPSRMTIAQLIECLLGKV 998
BLAST of mRNA_L-elsbetiae_contig5974.14471.1 vs. uniprot
Match: F0YGN2_AURAN (DNA-directed RNA polymerase subunit beta n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YGN2_AURAN) HSP 1 Score: 1059 bits (2739), Expect = 0.000e+0 Identity = 526/766 (68.67%), Postives = 614/766 (80.16%), Query Frame = 1 Query: 64 GGHIRAQLPYIRTDVPVVLVFRALGYTNDKAILEHIVYDFSDTDMMEKFRPSLEEADVIQNQVVAQDFIGKRGSAVNVGRNERINYAKGLLQREFLPHVGIGAGTEAKKVFFLGYMVHKLLMCSLGRLEEDDRDHYGKKRLDLAGALLAGLFRQLFRKLTQNVRKYLQLCLDKGTQFVVGTAIKSQFITDGLKYSLATGNWGDKKTATKAGVSQVLNRLTYASALSHLRRLNTPLGREGKQARTREDDGHNGAKPRQLHNTHWGFICPAETPEGQAVGLVKNLALMAYISVGCSLSPILEFLEEWAMENLDEIAPHMIAQTNCTKVFVNGNWVGVHRDPNRLVQTLVHQRRALDIDVEVSVVRDIKGRELRLYTDAGRVCRPLFVVEN--------------NRLRIRKKHINDLHDPNYGWTNLMQQGVVEYIDTEEEETTMVAMEPKDLEESGGYSSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQLRMDTLAHVLHYPEKPLVTTRAMEHLHFRELPSGVNVIVGIMVYSGYNQEDSLIMNQSAVDRGLFRSSFFRTLNDQEKAGRGIGDMAVLSAESFERPARENTAGMKHGNYDKLEDDGLVAPGTRVSGTDVLIGKTTPLGGGGGASGVTGGPGNRSKKDSSTVMRSHEDGIVDRVMLSTNQEGFKFCKVRIRNVRVPQIGDKFASRHGQKGTIGMTYRQEDMPWSIDGIVPDIIVNPHAIPSRMTIAQLIECLLGKVG 2319 G IR LPY+R DVPV++VFRALG+ D+ ILEH+VYDFSDT+MME+ RPSL+EA VIQNQ +A DFIG+RGSA N+GR++R+ YAK LLQ+E LPHVG ++ KK FF+GY+VHKLLMCSL R++EDDRDHYGKKRLDLAG LL GLFR LFRKLT++V YLQ C+D G F + +AIKS+ +TDGL+YSLATGNWGD+K A++AGVSQVLNRLTYAS LSHLRRLNTPLGREGKQA KPRQLHNTHWGFICPAETPEGQAVGLVKNLALM+Y+SVG SPILEFLEEW+MENL+EI+P IA TK+FVNG+WVGVHRDP+ L TL RR +DID EVSVVRDIK +ELR+YTDAGRVCRPL +VE LR+RK H+ L + + GWT L+ +G+VE IDTEEEET M+AM P DL E YSSTYTHCEIHPSMILG+C SIIPFPDHNQSPRNTYQSAMGKQAMGIYASN+Q RMDTL+HVLHYP+KPL TTRAMEHLHFRELPSGVN IV IM Y+GYNQEDSLIMNQ+A+DRGLFRS+F+RT +D+E +GI D E+FERP R+ M+HG+Y+K++ DGLV+PG RVSG+D+L+GKT+P SG+ SK+DSST MR +E G+VD+VMLSTNQ+G KF KVR R +R+PQIGDKFASRHGQKGTIGMTY QEDMPW+ DG+ PDIIVNPHAIPSRMTI L+ECL KVG Sbjct: 301 GNQIRVTLPYVRVDVPVIVVFRALGFVADRDILEHVVYDFSDTEMMERLRPSLDEAFVIQNQTIALDFIGRRGSATNIGRSKRVQYAKELLQKEVLPHVGTEEQSDTKKAFFVGYIVHKLLMCSLERIDEDDRDHYGKKRLDLAGPLLGGLFRMLFRKLTKDVLAYLQKCIDDGRDFNLASAIKSRVVTDGLRYSLATGNWGDRKDASRAGVSQVLNRLTYASTLSHLRRLNTPLGREGKQA-----------KPRQLHNTHWGFICPAETPEGQAVGLVKNLALMSYVSVGSPQSPILEFLEEWSMENLEEISPQTIADPGTTKIFVNGSWVGVHRDPSTLESTLRSLRRQIDIDPEVSVVRDIKEKELRVYTDAGRVCRPLLIVEAASTVTRVRSQEATFQELRLRKSHVQKLVNGDLGWTQLLVKGLVELIDTEEEETAMIAMIPSDLNEP--YSSTYTHCEIHPSMILGICGSIIPFPDHNQSPRNTYQSAMGKQAMGIYASNFQQRMDTLSHVLHYPQKPLATTRAMEHLHFRELPSGVNAIVAIMCYTGYNQEDSLIMNQAAIDRGLFRSTFYRTYSDKEH-NKGIWDSPEYLQETFERPNRDECTAMRHGSYEKIDSDGLVSPGVRVSGSDILVGKTSPSW----HSGLKAERSGPSKRDSSTTMRPNESGLVDQVMLSTNQDGMKFTKVRTRTIRIPQIGDKFASRHGQKGTIGMTYAQEDMPWTRDGVSPDIIVNPHAIPSRMTIGHLVECLQSKVG 1048
BLAST of mRNA_L-elsbetiae_contig5974.14471.1 vs. uniprot
Match: A0A8J2SZW4_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SZW4_9STRA) HSP 1 Score: 1053 bits (2724), Expect = 0.000e+0 Identity = 529/780 (67.82%), Postives = 618/780 (79.23%), Query Frame = 1 Query: 64 GGHIRAQLPYIRTDVPVVLVFRALGYTNDKAILEHIVYDFSDTDMMEKFRPSLEEADVIQNQVVAQDFIGKRGSAVNVGRNERINYAKGLLQREFLPHVGIGAGTEAKKVFFLGYMVHKLLMCSLGRLEEDDRDHYGKKRLDLAGALLAGLFRQLFRKLTQNVRKYLQLCLDKGTQFVVGTAIKSQFITDGLKYSLATGNWGDKKTATKAGVSQVLNRLTYASALSHLRRLNTPLGREGKQARTREDDGHNGAKPRQLHNTHWGFICPAETPEGQAVGLVKNLALMAYISVGCSLSPILEFLEEWAMENLDEIAPHMIAQTNCTKVFVNGNWVGVHRDPNRLVQTLVHQRRALDIDVEVSVVRDIKGRELRLYTDAGRVCRPLFVVENN------------------RLRIRKKHINDLHDPNYGWTNLMQQGVVEYIDTEEEETTMVAMEPKDLEESGGYSSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQLRMDTLAHVLHYPEKPLVTTRAMEHLHFRELPSGVNVIVGIMVYSGYNQ----------EDSLIMNQSAVDRGLFRSSFFRTLNDQEKAGRGIGDMAVLSAESFERPARENTAGMKHGNYDKLEDDGLVAPGTRVSGTDVLIGKTTPLGGGGGASGVTGGPGNRSKKDSSTVMRSHEDGIVDRVMLSTNQEGFKFCKVRIRNVRVPQIGDKFASRHGQKGTIGMTYRQEDMPWSIDGIVPDIIVNPHAIPSRMTIAQLIECLLGKVG 2319 G IR LPY+R D+PV++VFRALG+ D+ ILEH+VYDFSDTDMME+ RPSL+EA V+QNQ +A DFIG+RGSA N+GR++R+ YAK LLQ+E LPHVG ++ KK FF+GY+VHKLLMCSL R++EDDRDHYGKKRLDLAG LL GLFR LFRKLT++V YLQ C+D+ F + +AIKS+ ITDGL+YSLATGNWGD+K A++AGVSQVLNRLTYAS LSHLRRLNTPLGREGKQA KPRQLHNTHWGFICPAETPEGQAVGLVKNLALMAY+SVG SPILEFLEEW+MENL+EI+P IA TK+FVNG+W+GVHRDP L TL RR +DID EVSVVRDIK +ELR+YTDAGRVCRPL +VE++ +L++RK HI+ L + GWT L+ +G+VE +DTEEEE TM+AM P DL E YSSTYTHCEIHPSMILG+C SIIPFPDHNQSPRNTYQSAMGKQAMGIYASN+Q RMDTLAHVLHYP+KPL TTRAMEHLHFRELPSGVN IV IM Y+GYNQ DSLIMNQ+A+DRGLFRSSF+RT DQE++ GD A L E+FERP +++ M+HG+Y+K++ DGLV+PG RVSG D+LIGKT P+ GG SG+ K+DSST MR +E G+VD+VMLSTNQ+G KF KVR R+VR+PQIGDKFASRHGQKGTIGMTY QEDMPW+ +GI PDIIVNPHAIPSRMTI L+ECL KVG Sbjct: 300 GNQIRMTLPYVRVDIPVIIVFRALGFVADRDILEHVVYDFSDTDMMERLRPSLDEAFVVQNQTIALDFIGRRGSATNIGRSKRVQYAKELLQKEVLPHVGTEEQSDTKKAFFVGYIVHKLLMCSLERIDEDDRDHYGKKRLDLAGPLLGGLFRMLFRKLTKDVLAYLQKCIDEARDFNLASAIKSRLITDGLRYSLATGNWGDRKDASRAGVSQVLNRLTYASTLSHLRRLNTPLGREGKQA-----------KPRQLHNTHWGFICPAETPEGQAVGLVKNLALMAYVSVGSPQSPILEFLEEWSMENLEEISPQTIADPGTTKIFVNGSWIGVHRDPCTLEATLRSLRRQIDIDPEVSVVRDIKEKELRVYTDAGRVCRPLLIVESDHASTWKDPLNHSSSSPAQKLKLRKPHIHKLVNGELGWTQLLVKGLVELVDTEEEEATMIAMIPSDLNEP--YSSTYTHCEIHPSMILGICGSIIPFPDHNQSPRNTYQSAMGKQAMGIYASNFQQRMDTLAHVLHYPQKPLATTRAMEHLHFRELPSGVNAIVAIMCYTGYNQAPSSALSSLKSDSLIMNQAAIDRGLFRSSFYRTYVDQERS-HVTGDAAGLYCETFERPGQDHCVAMRHGSYEKVDCDGLVSPGVRVSGADILIGKTVPVLNGGETSGLV-------KRDSSTAMRPNESGLVDQVMLSTNQDGMKFTKVRTRSVRIPQIGDKFASRHGQKGTIGMTYAQEDMPWTRNGISPDIIVNPHAIPSRMTIGHLVECLQSKVG 1058
BLAST of mRNA_L-elsbetiae_contig5974.14471.1 vs. uniprot
Match: A0A7S3PZE7_9STRA (DNA-directed RNA polymerase subunit beta n=5 Tax=Bacillariophyta TaxID=2836 RepID=A0A7S3PZE7_9STRA) HSP 1 Score: 1051 bits (2719), Expect = 0.000e+0 Identity = 532/769 (69.18%), Postives = 618/769 (80.36%), Query Frame = 1 Query: 34 FQGSQHSKVNGGHIRAQLPYIRTDVPVVLVFRALGYTNDKAILEHIVYDFSDTDMMEKFRPSLEEADVIQNQVVAQDFIGKRGSAVNVGRNERINYAKGLLQREFLPHVGIGAGTEAKKVFFLGYMVHKLLMCSLGRLEEDDRDHYGKKRLDLAGALLAGLFRQLFRKLTQNVRKYLQLCLDKGTQFVVGTAIKSQFITDGLKYSLATGNWGDK-KTATKAGVSQVLNRLTYASALSHLRRLNTPLGREGKQARTREDDGHNGAKPRQLHNTHWGFICPAETPEGQAVGLVKNLALMAYISVGCSLSPILEFLEEWAMENLDEIAPHMIAQTNCTKVFVNGNWVGVHRDPNRLVQTLVHQRRALDIDVEVSVVRDIKGRELRLYTDAGRVCRPLFVV-ENNRLRIRKKHINDLH-----DPNYGWTNLMQQGVVEYIDTEEEETTMVAMEPKDLEESGGYSSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQLRMDTLAHVLHYPEKPLVTTRAMEHLHFRELPSGVNVIVGIMVYSGYNQEDSLIMNQSAVDRGLFRSSFFRTLNDQEKAGRGIGDMAVLSAESFERPARENTAGMKHGNYDKLEDDGLVAPGTRVSGTDVLIGKTTPLGGGGGASGVTGGPGNR-SKKDSSTVMRSHEDGIVDRVMLSTNQEGFKFCKVRIRNVRVPQIGDKFASRHGQKGTIGMTYRQEDMPWSIDGIVPDIIVNPHAIPSRMTIAQLIECLLGKV 2316 +Q + G IR+ LPYIRTD+PVV++FRALGY D+ I+EH+VYD +D +MM+ FRPSLEEA VIQ Q VA DFIG+RGSA +V +++RI YA G+LQ+E LPHVG EA+K FFLGY VHKLLMC LGR +EDDRDH+GKKRLDLAG LL GLFR LF KLT++VRK+LQ CLD+G F +G AIKS ITDGLKYSLATGNWGDK +A KAGVSQVLNRLTYASALSHLRR NTPL R GKQA KPRQLHNTHWG +CPAETPEGQAVGLVKNLALMAYI+ G + +PILEFLEE++ ENL +I P +IA+ N K+FVNGNWVG+HRDP LV T RR +DID EVS+VRDI E+R+YTDAGR+CRPLFVV E+ + I+K HI L W++L+ G+VEY+DTEEEET M+AMEPKDL +S YSSTYTHCEIHPSMILG+CASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQ+RMDT+AHVLHYP+KPL TTRAME LHFRELPSGVN IV IMVY+GYNQEDSLI+NQSA+DRGLFRSS++R NDQEKA +G + L+AE FE+P ++ GMKHG Y KL+DDGLV PGTRVSG D+LIGKT PL T G +R +K+D ST M+++E+GIVD VM+ST +EG++F KVRIRNVR+PQIGDKFASRHGQKGTIGM YRQEDMP++ +GIVPDIIVNPHAIPSRMTIAQLIECLLGKV Sbjct: 287 YQKGGKGAIEGNQIRSTLPYIRTDIPVVIIFRALGYVADRDIIEHVVYDLTDGEMMDLFRPSLEEAFVIQRQDVALDFIGRRGSAKDVTKDDRIRYASGILQKEVLPHVGTEENCEARKGFFLGYAVHKLLMCKLGRADEDDRDHFGKKRLDLAGPLLGGLFRVLFSKLTKDVRKHLQRCLDEGKHFNIGAAIKSNHITDGLKYSLATGNWGDKGASAPKAGVSQVLNRLTYASALSHLRRCNTPLARTGKQA-----------KPRQLHNTHWGMVCPAETPEGQAVGLVKNLALMAYITTGTAQAPILEFLEEFSTENLTDILPSVIAEPNTCKIFVNGNWVGIHRDPKTLVDTFRSLRRVVDIDAEVSIVRDIPEAEVRIYTDAGRICRPLFVVTEDQEMAIKKHHILQLQGVLQDQKKLSWSDLLMDGLVEYVDTEEEETAMIAMEPKDLGDS--YSSTYTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQVRMDTMAHVLHYPQKPLCTTRAMEFLHFRELPSGVNCIVAIMVYTGYNQEDSLILNQSAIDRGLFRSSYYRCYNDQEKAS-SVGTIGSLTAEKFEKPLFDSCRGMKHGEYGKLDDDGLVQPGTRVSGDDILIGKTAPLD-------STAGMASRFTKRDCSTSMKANENGIVDNVMVSTTKEGYRFTKVRIRNVRIPQIGDKFASRHGQKGTIGMNYRQEDMPFTAEGIVPDIIVNPHAIPSRMTIAQLIECLLGKV 1034
BLAST of mRNA_L-elsbetiae_contig5974.14471.1 vs. uniprot
Match: A0A7S1FRA3_9STRA (DNA-directed RNA polymerase subunit beta n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FRA3_9STRA) HSP 1 Score: 1048 bits (2709), Expect = 0.000e+0 Identity = 526/768 (68.49%), Postives = 620/768 (80.73%), Query Frame = 1 Query: 37 QGSQHSKVNGGHIRAQLPYIRTDVPVVLVFRALGYTNDKAILEHIVYDFSDTDMMEKFRPSLEEADVIQNQVVAQDFIGKRGSAVNVGRNERINYAKGLLQREFLPHVGIGAGTEAKKVFFLGYMVHKLLMCSLGRLEEDDRDHYGKKRLDLAGALLAGLFRQLFRKLTQNVRKYLQLCLDKGTQFVVGTAIKSQFITDGLKYSLATGNWGDKKTATKAGVSQVLNRLTYASALSHLRRLNTPLGREGKQARTREDDGHNGAKPRQLHNTHWGFICPAETPEGQAVGLVKNLALMAYISVGCSLSPILEFLEEWAMENLDEIAPHMIAQTNCTKVFVNGNWVGVHRDPNRLVQTLVHQRRALDIDVEVSVVRDIKGRELRLYTDAGRVCRPLFVVENN--RLRIRKKHINDLHDPNYG---WTNLMQQGVVEYIDTEEEETTMVAMEPKDLEES---GGYSSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQLRMDTLAHVLHYPEKPLVTTRAMEHLHFRELPSGVNVIVGIMVYSGYNQEDSLIMNQSAVDRGLFRSSFFRTLNDQEKAGRGIGDMAVLSAESFERPARENTAGMKHGNYDKLEDDGLVAPGTRVSGTDVLIGKTTPLGGGGGASGVTGGPGNRSKKDSSTVMRSHEDGIVDRVMLSTNQEGFKFCKVRIRNVRVPQIGDKFASRHGQKGTIGMTYRQEDMPWSIDGIVPDIIVNPHAIPSRMTIAQLIECLLGKV 2316 +G + + G IR LPYIRTDVP+V+VFRALGY D+ I+EH+VYD +D +MM+ FRPSLEE+ VIQ Q VA DFIG+RGSA +V +++RI YA G+LQ+E LPHVG AG E+KK +FLGY VHKLLMC LGR EDDRDH+GKKR+DLAG LL GLFR LFRKLT++VR++LQ CL++ F +G AIKS ITDGLKYSLATGNWGDK ++ KAGVSQVLNRLTYAS LSHLRR+NTPL R GKQA KPRQLHN+HWG +CPAETPEGQAVGLVKNLALMAYI+ G + P+LEFLEE++ ENL ++ P +IA+ + +K+FVNGNWVG+HRDP LV+ RR +DID EVS+VRDI E+R+YTDAGR+CRPLFVV++ R+ + K I L D W +L+ G+VEYIDTEEEETTM+AMEPKDLEES GGYSSTYTHCEIHP+MILG+CASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQ+RMDT+AHVLHYP+KPL TTRAME LHFRELPSGVN IVGIM+Y+GYNQEDSLI+NQSA+DRGLFRSS+FR +DQEK G G L++E+FERP +N GMKHG Y KL++DGLV PG+RVSG D+LIGKT PL + V P +K+D ST M+S ++GIVD VM+ST +EG++F KVRIRN R+PQIGDKFASRHGQKGTIGMTYRQEDMP+S +GIVPDIIVNPHAIPSRMTIAQLIECLLGKV Sbjct: 302 RGVDGAGIEGNQIRTTLPYIRTDVPIVVVFRALGYVADRDIIEHVVYDLTDGEMMDIFRPSLEESYVIQRQDVALDFIGRRGSAKDVTKDDRIRYASGILQKEMLPHVGTEAGCESKKGYFLGYAVHKLLMCRLGRANEDDRDHFGKKRIDLAGPLLGGLFRVLFRKLTKDVRRHLQRCLEESRHFNLGAAIKSNHITDGLKYSLATGNWGDKGSSAKAGVSQVLNRLTYASTLSHLRRMNTPLARTGKQA-----------KPRQLHNSHWGMVCPAETPEGQAVGLVKNLALMAYITTGTAQVPVLEFLEEFSTENLTDVLPSVIAEPSVSKIFVNGNWVGIHRDPKSLVKQCRSLRRMVDIDAEVSIVRDINESEVRIYTDAGRICRPLFVVDDREQRMVVTKSDIARLQDEGGNRATWNDLLMNGIVEYIDTEEEETTMIAMEPKDLEESRRGGGYSSTYTHCEIHPAMILGICASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQVRMDTMAHVLHYPQKPLCTTRAMEFLHFRELPSGVNCIVGIMIYTGYNQEDSLILNQSAIDRGLFRSSYFRCYSDQEK---GSGASNPLNSETFERPLHDNCRGMKHGEYGKLDEDGLVQPGSRVSGEDILIGKTAPLE----TNSVM--PSRYTKRDCSTPMKSTDNGIVDNVMISTTKEGYRFTKVRIRNTRIPQIGDKFASRHGQKGTIGMTYRQEDMPFSAEGIVPDIIVNPHAIPSRMTIAQLIECLLGKV 1049
BLAST of mRNA_L-elsbetiae_contig5974.14471.1 vs. uniprot
Match: A0A024TRP0_9STRA (DNA-directed RNA polymerase subunit beta n=17 Tax=Saprolegniaceae TaxID=4764 RepID=A0A024TRP0_9STRA) HSP 1 Score: 1043 bits (2696), Expect = 0.000e+0 Identity = 522/769 (67.88%), Postives = 622/769 (80.88%), Query Frame = 1 Query: 31 YFQGSQHSKVNGGHIRAQLPYIRTDVPVVLVFRALGYTNDKAILEHIVYDFSDTDMMEKFRPSLEEADVIQNQVVAQDFIGKRGSAVNVGRNERINYAKGLLQREFLPHVGIGAGTEAKKVFFLGYMVHKLLMCSLGRLEEDDRDHYGKKRLDLAGALLAGLFRQLFRKLTQNVRKYLQLCLDKGTQFVVGTAIKSQFITDGLKYSLATGNWGDKKTATKAGVSQVLNRLTYASALSHLRRLNTPLGREGKQARTREDDGHNGAKPRQLHNTHWGFICPAETPEGQAVGLVKNLALMAYISVGCSLSPILEFLEEWAMENLDEIAPHMIAQTNCTKVFVNGNWVGVHRDPNRLVQTLVHQRRALDIDVEVSVVRDIKGRELRLYTDAGRVCRPLFVVENNRLRIRKKHINDLHD---PNYGWTNLMQQGVVEYIDTEEEETTMVAMEPKDLEESGGYSSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQLRMDTLAHVLHYPEKPLVTTRAMEHLHFRELPSGVNVIVGIMVYSGYNQEDSLIMNQSAVDRGLFRSSFFRTLNDQE--KAGRGIGD-MAVLSAESFERPARENTAGMKHGNYDKLEDDGLVAPGTRVSGTDVLIGKTTPLGGGGGASGVTGGPGNRSKKDSSTVMRSHEDGIVDRVMLSTNQEGFKFCKVRIRNVRVPQIGDKFASRHGQKGTIGMTYRQEDMPWSIDGIVPDIIVNPHAIPSRMTIAQLIECLLGKVG 2319 Y + S V+G IRA +PYIR D+PVV++FRALG+ D+ ILEHI YDF+D ++ME+F+PSLEEA VIQ Q VA DFIG+RGSAVNV + +R+ YA+ +LQ+E LPHVG+ E KK +FLGY+VHKLLMCSLGRL EDDRDHYG KRLDLAG LL GLFR LF+KLT++V+ YLQ C+D G F + AIKS+ I++GL+YSLATGNWG +KTA+KAGVSQVLNRLTYAS+LSHLRRLNTPLGREGKQA KPRQLHNTHWG ICPAETPEGQAVGLVKNLALMAYISVG +PILEFLEEW+ ENL+EI +I TK+FVNGNWVGVHR+PN LV+TL RR +DID EVSV+RD+ +ELR+YTDAGRVCRPLF+VENNRL ++K+H+ L + ++ W NL+ +GVVE IDTEEEE M+AMEPKDL + S YTHCEIHPSMILG+CASIIPFPDHNQSPRNTYQSAMGKQAMGIY+SN++ RMDT+A++L+YP+KPLVTTRAME+LHFRELPSGVN IV I Y+GYNQEDSLIMNQSA+DRGLFRS+F+R DQE K+ GIG +++E FE+P R +KHG+Y KL+ DGLVAPGTRVSG+D++IGKT+PL +S G K+D+ST +R+HE+GI+D VML+TN EGFKF KVR RN+R+PQIGDKFASRHGQKGTIGMTYRQEDMP++I+G+ PDIIVNPHAIPSRMTI LIECLLGKV Sbjct: 239 YAKSGGKSAVSGHQIRAVIPYIRQDIPVVIIFRALGFVADREILEHICYDFTDVELMERFKPSLEEAFVIQEQEVALDFIGRRGSAVNVSKADRLRYAQDILQKEMLPHVGVEDHNETKKAYFLGYVVHKLLMCSLGRLGEDDRDHYGNKRLDLAGPLLGGLFRVLFKKLTKDVKGYLQKCVDAGRDFQLSLAIKSKTISNGLRYSLATGNWGMQKTASKAGVSQVLNRLTYASSLSHLRRLNTPLGREGKQA-----------KPRQLHNTHWGMICPAETPEGQAVGLVKNLALMAYISVGSPQAPILEFLEEWSTENLEEITAQIIP--TATKIFVNGNWVGVHREPNELVKTLRSLRRCVDIDAEVSVIRDLMQKELRIYTDAGRVCRPLFIVENNRLLLQKQHVVKLQNHKHTHFRWQNLLTEGVVELIDTEEEEVCMIAMEPKDLRNA---RSLYTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQAMGIYSSNFRARMDTMANILNYPQKPLVTTRAMEYLHFRELPSGVNAIVAIATYTGYNQEDSLIMNQSAIDRGLFRSTFYRCYVDQERNKSPHGIGGGSGFMNSEEFEKPTRATCMRLKHGSYHKLDADGLVAPGTRVSGSDIIIGKTSPLP----SSDENGLEARHQKRDASTTLRTHENGIIDSVMLTTNAEGFKFTKVRFRNIRIPQIGDKFASRHGQKGTIGMTYRQEDMPFTIEGVTPDIIVNPHAIPSRMTIGHLIECLLGKVS 987 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5974.14471.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5974.14471.1 >prot_L-elsbetiae_contig5974.14471.1 ID=prot_L-elsbetiae_contig5974.14471.1|Name=mRNA_L-elsbetiae_contig5974.14471.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=773bp RSPPPRASSSYFQGSQHSKVNGGHIRAQLPYIRTDVPVVLVFRALGYTNDback to top mRNA from alignment at L-elsbetiae_contig5974:365..11724+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5974.14471.1 ID=mRNA_L-elsbetiae_contig5974.14471.1|Name=mRNA_L-elsbetiae_contig5974.14471.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=11360bp|location=Sequence derived from alignment at L-elsbetiae_contig5974:365..11724+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5974:365..11724+ >mRNA_L-elsbetiae_contig5974.14471.1 ID=mRNA_L-elsbetiae_contig5974.14471.1|Name=mRNA_L-elsbetiae_contig5974.14471.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=4638bp|location=Sequence derived from alignment at L-elsbetiae_contig5974:365..11724+ (Laminarionema elsbetiae ELsaHSoW15)back to top |