mRNA_L-elsbetiae_contig5953.14442.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5953.14442.1 vs. uniprot
Match: D7FT40_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT40_ECTSI) HSP 1 Score: 388 bits (997), Expect = 2.170e-123 Identity = 198/208 (95.19%), Postives = 205/208 (98.56%), Query Frame = 1 Query: 1306 RVKTSSGYYAGLQSGKDFKVVEQNLKRKHEEEMKGADKTSSGQGAQTVYRDKKGRKLDMLNEFMKQQDARAGKEVEEAKEQFAWGRGKVQKEEEKQWKEELENIAAEPFARTVDDTRLEDARKAEIRADDPMAAYMAKKKAKERVKSGKPLKPEYKGPQPKPNRFGIRPGYRWDGNDRGNGWEARIVAKGVDNNYKAELAYKWATADM 1929 RVKTSSGYYAGLQSGKDFKVVEQNLKRKH+ EMKGADK+SSGQGA+TVYRDKKGRKLDMLNEFMK QDARAGK+VEEAK+QFAWGRGKVQKEEEKQWKEELENIAAEPFARTVDDTRLE+ARKAEIRADDPMAAYMAKKKAKE VKSGKPLKPEYKGPQPKPNRFGIRPGYRWDGNDRGNGWE+RIVAKGVDNNYKAELAYKWATADM Sbjct: 422 RVKTSSGYYAGLQSGKDFKVVEQNLKRKHDAEMKGADKSSSGQGAETVYRDKKGRKLDMLNEFMKSQDARAGKKVEEAKDQFAWGRGKVQKEEEKQWKEELENIAAEPFARTVDDTRLEEARKAEIRADDPMAAYMAKKKAKEGVKSGKPLKPEYKGPQPKPNRFGIRPGYRWDGNDRGNGWESRIVAKGVDNNYKAELAYKWATADM 629
BLAST of mRNA_L-elsbetiae_contig5953.14442.1 vs. uniprot
Match: A0A6H5KM91_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KM91_9PHAE) HSP 1 Score: 296 bits (757), Expect = 4.250e-88 Identity = 157/171 (91.81%), Postives = 163/171 (95.32%), Query Frame = 1 Query: 1306 RVKTSSGYYAGLQSGKDFKVVEQNLKRKHEEEMKGADKTSSGQGAQTVYRDKKGRKLDMLNEFMKQQDARAGKEVEEAKEQFAWGRGKVQKEEEKQWKEELENIAAEPFARTVDDTRLEDARKAEIRADDPMAAYMAKKKAKERVKSGKPLKPEYKGPQPKPNRFGIRPGY 1818 RVKTSSGYYAGLQSGKDFKVVEQNLKRKH+ EMKGADK SSGQGA+TVYRDKKGRKLDMLNEFMK QDARAGK+VEEAK+QFAWGRGKVQKEEEKQWKEELENIAAEPFARTVDDTRLE+ARKAEIRADDPMAAYMAKKKAKERVKSGKPLKPEYKGPQPKPNR P + Sbjct: 436 RVKTSSGYYAGLQSGKDFKVVEQNLKRKHDAEMKGADKRSSGQGAETVYRDKKGRKLDMLNEFMKSQDARAGKKVEEAKDQFAWGRGKVQKEEEKQWKEELENIAAEPFARTVDDTRLEEARKAEIRADDPMAAYMAKKKAKERVKSGKPLKPEYKGPQPKPNRHVWHPAW 606
BLAST of mRNA_L-elsbetiae_contig5953.14442.1 vs. uniprot
Match: A0A7S2BP57_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BP57_9STRA) HSP 1 Score: 202 bits (513), Expect = 1.120e-57 Identity = 108/180 (60.00%), Postives = 133/180 (73.89%), Query Frame = 1 Query: 1396 EEMKGADKTSSGQGAQTVYRDKKGRKLDMLNEFMKQQDARAGKEVEEAKEQFAWGRGKVQKEEEKQWKEELENIAAEPFARTVDDTRLEDARKAEIRADDPMAAYMAKKKAKERVK--SGKPLKPEYKGPQPKPNRFGIRPGYRWDGNDRGNGWEARIVAKGVDNNYKAELAYKWATADM 1929 E+ K ADK+ + +T+YRDKKGRKLDMLNEFM+QQ R GKEVEE EQ WG+G VQK+EEK +EEL NIA EPFARTV+D +++ + +I ADDPMAAYM KK+ KE VK +GKP KP YKGP+PKPNRFGI PGYRWDG DRG GWE ++ A + + Y+W+T+DM Sbjct: 9 EQQKEADKSLGDKQEETIYRDKKGRKLDMLNEFMRQQAIREGKEVEEKAEQEEWGKGTVQKQEEKAHQEELANIANEPFARTVNDPKVDAMYREKIHADDPMAAYMMKKREKEGVKGKNGKPAKPFYKGPKPKPNRFGIPPGYRWDGVDRGTGWEDKVYAYQANKGVNKQAEYEWSTSDM 188
BLAST of mRNA_L-elsbetiae_contig5953.14442.1 vs. uniprot
Match: A0A835ZAF7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAF7_9STRA) HSP 1 Score: 195 bits (495), Expect = 2.190e-55 Identity = 101/167 (60.48%), Postives = 130/167 (77.84%), Query Frame = 1 Query: 1429 GQGAQTVYRDKKGRKLDMLNEFMKQQDARAGKEVEEAKEQFAWGRGKVQKEEEKQWKEELENIAAEPFARTVDDTRLEDARKAEIRADDPMAAYMAKKKAKERVKSGKPLKPEYKGPQPKPNRFGIRPGYRWDGNDRGNGWEARIVAKGVDNNYKAELAYKWATADM 1929 GQ A+TVYRD++GRKLDML+EFM+QQDAR G E+A ++ WGRGKVQKE++++ ++ELENI PFART + L++ KA++R+DDPMAAYMAKK+AK SGKPLKP YKGP PKPNRFGI PGYRWDG DRG+GWE ++V + +K E +Y++ ADM Sbjct: 1 GQTAETVYRDRRGRKLDMLSEFMRQQDAREGAVREKADAEYEWGRGKVQKEDKERQRDELENIKLAPFARTAE--HLDEELKAQLRSDDPMAAYMAKKQAKTAAASGKPLKPVYKGPPPKPNRFGILPGYRWDGVDRGSGWEQKLVDAQLARRHKGEASYQYGCADM 165
BLAST of mRNA_L-elsbetiae_contig5953.14442.1 vs. uniprot
Match: A0A7S4D5S3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D5S3_HETAK) HSP 1 Score: 184 bits (466), Expect = 2.060e-49 Identity = 104/209 (49.76%), Postives = 133/209 (63.64%), Query Frame = 1 Query: 1306 RVKTSSGYYAGLQSGKDFKVVEQNLKRKHEEEMKGADKTSSGQGAQTVYRDKKGRKLDMLNEFMKQQDARAGKEVEEAKEQFAWGRGKVQKEEEKQWKEELENIAAEPFARTVDDTRLEDARKAEIRADDPMAAYMAKKKAKERVKSGKPLKPEYKGPQPKP-NRFGIRPGYRWDGNDRGNGWEARIVAKGVDNNYKAELAYKWATADM 1929 R K SSG+ +GLQSG +FK +EQ ++ E+ GAD+ SG+ A TVYRDK+GRKLDML +FM+QQ+A+ GK+ E +EQF WGRG VQK E+ ++EEL I A+PFAR DD +L A K EI ADDPMAAYM NR+G+RPGYRWDG+DRGNG+EAR++ K D E Y W+ +DM Sbjct: 93 RQKMSSGHASGLQSGAEFKEIEQQVRAARAAELAGADEEVSGRNAGTVYRDKRGRKLDMLTQFMEQQEAKDGKKKREEQEQFEWGRGAVQKRRERDFQEELREIQAQPFARYRDDEKLNQAAKEEIHADDPMAAYMLXXXXXXXXXXXXXXXXXXXXXXXXXXNRYGLRPGYRWDGHDRGNGFEARVLGKAADRQVFNERKYNWSVSDM 301
BLAST of mRNA_L-elsbetiae_contig5953.14442.1 vs. uniprot
Match: A0A6V1PRD0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1PRD0_HETAK) HSP 1 Score: 184 bits (466), Expect = 4.440e-48 Identity = 104/209 (49.76%), Postives = 133/209 (63.64%), Query Frame = 1 Query: 1306 RVKTSSGYYAGLQSGKDFKVVEQNLKRKHEEEMKGADKTSSGQGAQTVYRDKKGRKLDMLNEFMKQQDARAGKEVEEAKEQFAWGRGKVQKEEEKQWKEELENIAAEPFARTVDDTRLEDARKAEIRADDPMAAYMAKKKAKERVKSGKPLKPEYKGPQPKP-NRFGIRPGYRWDGNDRGNGWEARIVAKGVDNNYKAELAYKWATADM 1929 R K SSG+ +GLQSG +FK +EQ ++ E+ GAD+ SG+ A TVYRDK+GRKLDML +FM+QQ+A+ GK+ E +EQF WGRG VQK E+ ++EEL I A+PFAR DD +L A K EI ADDPMAAYM NR+G+RPGYRWDG+DRGNG+EAR++ K D E Y W+ +DM Sbjct: 214 RQKMSSGHASGLQSGAEFKEIEQQVRAARAAELAGADEEVSGRNAGTVYRDKRGRKLDMLTQFMEQQEAKDGKKKREEQEQFEWGRGAVQKRRERDFQEELREIQAQPFARYRDDEKLNQAAKEEIHADDPMAAYMLXXXXXXXXXXXXXXXXXXXXXXXXXXNRYGLRPGYRWDGHDRGNGFEARVLGKAADRQVFNERKYNWSVSDM 422
BLAST of mRNA_L-elsbetiae_contig5953.14442.1 vs. uniprot
Match: A0A7S1GEN6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GEN6_9STRA) HSP 1 Score: 175 bits (444), Expect = 1.420e-47 Identity = 99/199 (49.75%), Postives = 128/199 (64.32%), Query Frame = 1 Query: 1312 KTSSGYYAGLQSGKDFKVVEQNLKRKHEEEMKGADKTSSGQGAQTVYRDKKGRKLDMLNEFMKQQDARAGKEVEEAKEQFAWGRGKVQKEEEKQWKEELENIAAEPFARTVDDTRLEDARKAEIRADDPMAAYMAKKKAKERVKSGKPL-KPEYKGPQPKPNRFGIRPGYRWDGNDRGNGWEARIVAKGVDNNYKAELA 1905 + ++G AGL G+D K + L+R+ E++ D GQGA+TVYRD+KGRKLDML E M+QQD GK+V + E F WG G VQK E + EE+ IA PFART DD + D K++IR DPMAA M +K+ + K G P KP+Y+GP P PNR+GI PGYRWDG DRGNGWE +++A +AE A Sbjct: 1 RMATGERAGLLKGEDMKAEQLALRRREREKLAAMDAEMMGQGAETVYRDRKGRKLDMLQEMMRQQDLAKGKKVAKEAEAFDWGTGAVQKREVEARAEEMAKIAEAPFARTADDKDMNDYLKSQIREGDPMAAAMMRKQRERAAKEGGPGGKPQYRGPAPPPNRYGIAPGYRWDGVDRGNGWERKLLAYKAGKAARAEKA 199
BLAST of mRNA_L-elsbetiae_contig5953.14442.1 vs. uniprot
Match: W7TD64_9STRA (Bud13 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TD64_9STRA) HSP 1 Score: 179 bits (455), Expect = 4.730e-47 Identity = 107/213 (50.23%), Postives = 140/213 (65.73%), Query Frame = 1 Query: 1303 DRVKTSSGYYAGLQSGKDFKVVEQNLKRKHEEEMKGADKTSSGQGAQTVYRDKKGRKLDMLNEFMKQQDARAGKEVEEAKEQFAWGRGKVQKEEEKQWKEELENIAAEPFARTVDDTRLEDARKAEIRADDPMAAYMAKKK----AKERVKSGKPLKPEYKGPQPKPNRFGIRPGYRWDGNDRGNGWEARIVAKGVDNNYKAELAYKWATADM 1929 D +KT + + A L++ KD + H D +GQ A+TV RD++GRKL+ML+EF+ Q+ + GK +EAKE++ WGRGKVQKE+++ + ELE+I PFAR D +LE ARK EIRADDPMAAYM +K+ A+E +SGK LKPEYKGP PKPNRF IRPGYRWDG DRGNG+EAR + + K E W +D+ Sbjct: 167 DGLKTGAEFRAELEAQKDAEA--------HAWAEGAKDAGVTGQHAETVVRDRRGRKLEMLSEFLNQEAYKEGKAAKEAKEEYEWGRGKVQKEKDEDHRRELEDIKNAPFARYESDLKLERARKEEIRADDPMAAYMLQKQRDALAQEATRSGKVLKPEYKGPPPKPNRFNIRPGYRWDGIDRGNGFEARWFKRQSELVTKHERDRAWGMSDL 371
BLAST of mRNA_L-elsbetiae_contig5953.14442.1 vs. uniprot
Match: A0A7R9U1Z5_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U1Z5_9STRA) HSP 1 Score: 170 bits (431), Expect = 1.610e-45 Identity = 97/185 (52.43%), Postives = 124/185 (67.03%), Query Frame = 1 Query: 1318 SSGYYAGLQSGKDFKVVEQNLKRKHEEEMKGADKTSSGQGAQTVYRDKKGRKLDMLNEFMKQQDARAGKEVEEAKEQFAWGRGKVQKEEEKQWKEELENIAAEPFARTVDDTRLEDARKAEIRADDPMAAYMAKKKAKERVKSGKPLKPEYKGPQPKPNRFGIRPGYRWDGNDRGNGWEARIVAK 1872 SSG+ AGL + FK E L+R ++ SG+ ++TVYRD++GRKLDML+EFM+QQ+ + K + WG+G QK+ EK+++EELENI EPFAR DD RLE RK E+R DDPM AY+ K +R K+GK K Y GP P PNRFGI PGYRWDG DRGNG+EAR++AK Sbjct: 27 SSGHRAGLHTADSFKRAEDELRRDKAAKLSRMSDELSGKNSETVYRDRQGRKLDMLSEFMRQQEEKESKRXXXXX-XYEWGKGTKQKKMEKEYEEELENIRNEPFARAHDDPRLERMRKEELRPDDPMLAYVQK----QRAKTGKSTKKAYTGPPPPPNRFGIPPGYRWDGVDRGNGFEARVLAK 206
BLAST of mRNA_L-elsbetiae_contig5953.14442.1 vs. uniprot
Match: A0A7S2HC66_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HC66_9STRA) HSP 1 Score: 164 bits (415), Expect = 1.550e-43 Identity = 84/166 (50.60%), Postives = 115/166 (69.28%), Query Frame = 1 Query: 1444 TVYRDKKGRKLDMLNEFMKQQDARAGKEVEEAKEQFAWGRGKVQKEEEKQWKEELENIAAEPFARTVDDTRLEDARKAEIRADDPMAAYMAKKKAKERVK----SGKPLKPEYKGPQPKPNRFGIRPGYRWDGNDRGNGWEARIVAKGVDNNYKAELAYKWATADM 1929 T+ RD++G+KLD LNEFMK Q AG++ + +EQ WG+G VQK ++K+++ EL NI EPFAR+ +D +++ + +I +DDPMAAYM KK+A E K +GKP +P YKGP PKPNRF I PGYRWDG DRG GWEA+I+ + AY+W+ A+M Sbjct: 27 TIVRDRRGKKLDALNEFMKAQAKSAGEKAADDEEQLEWGKGSVQKNQDKEYEAELANIKNEPFARSRNDPKVDQMYRNKIHSDDPMAAYMLKKRAAEADKLSKHAGKPARPVYKGPTPKPNRFNIHPGYRWDGRDRGTGWEAKILDHAAHSGVMKNAAYEWSVAEM 192 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5953.14442.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5953.14442.1 >prot_L-elsbetiae_contig5953.14442.1 ID=prot_L-elsbetiae_contig5953.14442.1|Name=mRNA_L-elsbetiae_contig5953.14442.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=644bp MLAIRSHEAPGPGRDGRICLLFVDACTMSSKLDYLKKYGMPGGGDGGKKKback to top mRNA from alignment at L-elsbetiae_contig5953:3805..9987- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5953.14442.1 ID=mRNA_L-elsbetiae_contig5953.14442.1|Name=mRNA_L-elsbetiae_contig5953.14442.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6183bp|location=Sequence derived from alignment at L-elsbetiae_contig5953:3805..9987- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5953:3805..9987- >mRNA_L-elsbetiae_contig5953.14442.1 ID=mRNA_L-elsbetiae_contig5953.14442.1|Name=mRNA_L-elsbetiae_contig5953.14442.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3864bp|location=Sequence derived from alignment at L-elsbetiae_contig5953:3805..9987- (Laminarionema elsbetiae ELsaHSoW15)back to top |