mRNA_L-elsbetiae_contig5952.14441.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5952.14441.1 vs. uniprot
Match: D7G5C5_ECTSI (DUF1394 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5C5_ECTSI) HSP 1 Score: 423 bits (1088), Expect = 3.070e-140 Identity = 214/272 (78.68%), Postives = 250/272 (91.91%), Query Frame = 1 Query: 1 ITLVLQKCSEAIRIVQEYDGCGSVIRRSMSAPRDEGLESAATAALLPNVEKIRNFFEIARAMEQMMPVLLRRLAELASIVERPLLACKLTELLQVVLEWDQLKMMRPQIQNDFATYRRFLSRLKREEEAGLLSKLPVADTDANAISMFIAENVPMMCVLAKVTAKTAIDVPRVRSVIATVANMCCGMVHRRVYKSDATSRKLLMAMTSAAVLYDRITDSGVFVKRSHVGVSKCIKVLNKHGGATGEQLRATLRYSTMHYNSETTPKNIRNAL 816 + LV+++CS+AI+ VQ+Y+GC ++IR+SMSAP+D L+SA T ALLPNV+KI+ FF++AR +EQ+ P LL RLA L SIVE PLLAC LTELLQ VLEWDQ+KMMRPQ+QNDFATYRR+LSRLKRE+EAGLL +LPVADTDANAISMFIAENVPMM +L+KVTAKTA +VPRV++VIATVANMCCGMVHRR + +DATSRKLLMAMTSAAVLYDRITDSGVFV+RSH+GVSKCIKVLN+HGGATGEQLRATLRYSTMHYNS+TTPKNIR+AL Sbjct: 54 LCLVVERCSDAIQSVQQYEGCSALIRQSMSAPKDTELQSAVTEALLPNVKKIKTFFDLARDVEQLAPALLGRLAGLGSIVEAPLLACMLTELLQAVLEWDQIKMMRPQVQNDFATYRRYLSRLKREQEAGLLLELPVADTDANAISMFIAENVPMMVMLSKVTAKTAEEVPRVQNVIATVANMCCGMVHRRAHTNDATSRKLLMAMTSAAVLYDRITDSGVFVRRSHIGVSKCIKVLNRHGGATGEQLRATLRYSTMHYNSDTTPKNIRDAL 325
BLAST of mRNA_L-elsbetiae_contig5952.14441.1 vs. uniprot
Match: A0A835YT34_9STRA (DUF1394 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT34_9STRA) HSP 1 Score: 183 bits (465), Expect = 8.850e-49 Identity = 124/290 (42.76%), Postives = 160/290 (55.17%), Query Frame = 1 Query: 1 ITLVLQKCSE-------AIRIVQEYDGCGSVIRRSMSAPRDEGLESAATAALLPNVEKIRNFFEIARAMEQMMPVLLRRLAELAS-------IVERPLLACKLTELLQVVL--EWDQLKMMRPQIQNDFATYRRFLSRLKREEEAGLLSKLPVADTDANAISMFIAENVPMMCVLAKVTAKTAIDVPRVRSVIATVANMCCGMVHRRV-YKSDATSRKLLMAMTSAAVLYDRITDSGVFVKRSHVGVSKCIKVLNKHGGATGEQLRATLRYSTMHYNSETTPKNIRNALE 819 + V+Q+C A+ V Y GC VIR SMSAP D + AA ALLPNV++I + ++A +L VE C + LQ +D+L + QIQNDFA Y+R + R+ + L +L V+D A ISMFIAEN+P+ L+ R ++IA VAN+CCG V R Y+ DAT R+LL+ MTSA VLYDRIT GVF + VGVS+CIKVLNKHGG G QLR + Y+T H+NSETTP NIR AL+ Sbjct: 24 VRTVMQECLRCKAQIHGALEAVNAYTGCADVIRHSMSAPGDHSAQRAAFDALLPNVDRIASLHATSQASSS------EKLVGYGGGEHFHFFAVEEMRGVCAPSYTLQRTHFDHYDRLVTL-SQIQNDFAFYKRLMPRMVASSDY-TLEQLTVSDRHAGTISMFIAENMPLTVALSTALRDNT-TASRTANIIAQVANLCCGTVARADGYRQDATLRQLLLGMTSAVVLYDRITIEGVFARGGGVGVSRCIKVLNKHGGDAGLQLRNCIMYATKHFNSETTPNNIRRALQ 304
BLAST of mRNA_L-elsbetiae_contig5952.14441.1 vs. uniprot
Match: UPI0006B08DE9 (protein FAM49B-like n=1 Tax=Limulus polyphemus TaxID=6850 RepID=UPI0006B08DE9) HSP 1 Score: 149 bits (375), Expect = 4.190e-36 Identity = 96/285 (33.68%), Postives = 157/285 (55.09%), Query Frame = 1 Query: 10 VLQKCSEAIRIVQEYDGCGSVIRRSMSAPRDEGLESAATAALLPNVEKIRNFFEIARAMEQMMPVLLRRLAE-----LASIVERPLLACKLTELLQVVLEWDQLKMMRPQIQNDFATYRRFLSRLKREEEAGLLSK-LPVADTDANAISMFIAENVPMMCVLAKVTAKTAID-----VPRVRSVIATVANMCCGMVHRRV----YKSDATSRKLLMAMTSAAVLYDRITDSGVFVKRSHVGVSKCIKVLNKHGGATGEQLRATLRYSTMHYNSETTPKNIRNALE 819 VL+ E + ++ Y G G+ I+ ++ P+++ +SAA ++P V K+R F+E ++ +EQ++P +L L + + + L + E+L VLE+D LKM P IQNDF+ YRR +SRL+ + + ++ L V + AN +S+F A PM+ VL+ T++ D V + T+A +C MV + + TS +L M +LYD + +G FVK SH+ + CIKVL ++ E L LRY+T+H N E+TPK+I+N L+ Sbjct: 41 VLKHSREILADLRIYKGAGNEIKVAIGNPQNKQSQSAAWEVVIPLVTKLREFYEFSKKLEQVVPHILWDLCSGPMTPMQHLETQQALVKQFAEILDFVLEFDDLKMTNPAIQNDFSYYRRTVSRLRIANQDNIENEDLEVPNELANRMSLFYAHATPMLKVLSDTTSQFVSDNKDLPVENTSETLGTMAKVCQRMVENPELCARFNHEDTSLFVLRVMVGVVILYDHVHPAGAFVKSSHIDIKSCIKVLKEYPPEVVESLLNALRYTTIHLNDESTPKHIKNMLQ 325
BLAST of mRNA_L-elsbetiae_contig5952.14441.1 vs. uniprot
Match: A0A0G4IKW3_PLABS (DUF1394 domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IKW3_PLABS) HSP 1 Score: 143 bits (360), Expect = 3.090e-34 Identity = 90/275 (32.73%), Postives = 155/275 (56.36%), Query Frame = 1 Query: 10 VLQKCSEAIRIVQEYDGCGSVIRRSMSAPRDEGLESAATAALLPNVEKIRNFFEIARAMEQMMPVLLRRLA---ELASIVERPLLACKLTELLQVVLEWDQLKMMRPQIQNDFATYRRFLSRLKREEEAGLLSKLPVADTDANAISMFIAENVPMMCVLAKVTAKTAIDVPRVRSVIATVANMCCGMVHRRVYKSDATSRKLLMAMTSAAVLYDRIT-DSGVFVKRSHVGVSKCIKVLNKHGGATGEQLRATLRYSTMHYNSETTPKNIRNALEI 822 +L++ I ++ Y CG+ IR+++S P + E A A+ NV I FF ++ + M+ LL+ LA E + +L LL VL +D+LKM+RP IQNDF+ YRR L + + + L V D +A+ IS++IA+ +PMM LAK T+ + P V + +A +AN+C ++ + + + T++ L+ M + VL+D ++ + G FVK+S + + + ++++ K T L LRYST+HY+ ++TP IR+ L++ Sbjct: 41 ILERAPGVIAALEAYANCGAQIRKALSDPNPKS-EQEAFQAVKANVAIINMFFNFSKEVANMVRELLKTLATGQEKEAFCAHQFSVKQLGRLLDFVLRFDELKMLRPGIQNDFSYYRRVLPKHSNDPD------LKVRDEEASFISLYIAQPIPMMTALAKSTSSLYVSNPNVPAALALMANVCLELLKSKRFTTSETNQLLVRVMVGSIVLFDHVSLEGGAFVKKSGINIKQAVQLVVKEY-PTQNSLTNMLRYSTLHYSDDSTPAGIRSLLDV 307
BLAST of mRNA_L-elsbetiae_contig5952.14441.1 vs. uniprot
Match: A0A1Y1XK05_9FUNG (DUF1394-domain-containing protein n=2 Tax=Neocallimastigaceae TaxID=29007 RepID=A0A1Y1XK05_9FUNG) HSP 1 Score: 140 bits (354), Expect = 2.470e-33 Identity = 88/280 (31.43%), Postives = 147/280 (52.50%), Query Frame = 1 Query: 10 VLQKCSEAIRIVQEYDGCGSVIRRSMSAPRDEGLESAATAALLPNVEKIRNFFEIARAMEQMMPVLLRRLAELASIVER----PLLACKLTELLQVVLEWDQLKMMRPQIQNDFATYRRFLSRLKREEEAGLLSKLPVADTDANAISMFIAENVPMMCVLAKVT-------AKTAIDVPRVRSVIATVANMCCGMVHRRVYKSDATSRKLLMAMTSAAVLYDRITDSGVFVKRSHVGVSKCIKVLNKHGGATGEQLRATLRYSTMHYNSETTPKNIRNAL 816 +L + + ++ +++Y GCG +IR+++S+P + E A AL P+ K++ ++E ++ +E + P +L L + +I E KL +LL VL++D LKM P IQNDF+ YRR LSR+K + +PV D AN +S+F A + PM + T +K+ +D +V ++ + +C V + +S L M +L+D I G F K S + + CI+++ G + L TLRY++ H N E TPK+I+N L Sbjct: 41 LLNRSNAILQSLRQYTGCGELIRKAISSPSPQ-TEEEAWVALCPSAMKLKKYYEFSQRIEDIFPRILYVLCK-GNITENLEKYQATTKKLADLLNFVLQFDDLKMTNPSIQNDFSYYRRLLSRVKNNYNINKQT-IPVNDELANRMSLFYAYSTPMFKAVTDATLLFVSPNSKSGVDASQVSECLSLLTYICYNAVSKYRVQSQPMISFCLRVMVGCIILFDHIDPDGAFAKNSKINIRGCIRLIQGSAGVDADSLLNTLRYTSKHLNDEATPKSIKNLL 317
BLAST of mRNA_L-elsbetiae_contig5952.14441.1 vs. uniprot
Match: A0A1Y2CI08_9FUNG (DUF1394-domain-containing protein n=1 Tax=Neocallimastix californiae TaxID=1754190 RepID=A0A1Y2CI08_9FUNG) HSP 1 Score: 140 bits (352), Expect = 4.590e-33 Identity = 88/279 (31.54%), Postives = 146/279 (52.33%), Query Frame = 1 Query: 10 VLQKCSEAIRIVQEYDGCGSVIRRSMSAPRDEGLESAATAALLPNVEKIRNFFEIARAMEQMMPVLLRRLAE---LASIVERPLLACKLTELLQVVLEWDQLKMMRPQIQNDFATYRRFLSRLKREEEAGLLSKLPVADTDANAISMFIAENVPMMCVLAKVT-------AKTAIDVPRVRSVIATVANMCCGMVHRRVYKSDATSRKLLMAMTSAAVLYDRITDSGVFVKRSHVGVSKCIKVLNKHGGATGEQLRATLRYSTMHYNSETTPKNIRNAL 816 +L + + ++ +++Y GCG +IR+++S P + E A AL P+ K+R ++E ++ +E + P +L L + ++ KL +LL VL++D LKM P IQNDF+ YRR LSR+K + +PV D AN +S+F A + PM + T +K+ I +V ++ + +C V + +S L M +L+D I G FVK S + + CI+++ G + L TLR+++ H N ETTPK+I+N L Sbjct: 41 LLNRSNAILQSLRQYTGCGELIRKAISNPCPQ-TEEDAWNALCPSAMKLRKYYEFSQRIEDIFPRILYVLCNGNIIQNLERYQATTRKLADLLNFVLQFDDLKMTNPSIQNDFSYYRRLLSRVKNNHKINK-QNVPVNDELANRMSLFYAYSTPMFKAITDSTLTFVSPSSKSNISAAQVGECLSLITYICYNAVSKYRVQSQPMISFCLRVMVGCIILFDHIDPEGAFVKNSKINIKGCIRLIQGSAGVDADSLLNTLRFTSKHVNDETTPKSIKNLL 317
BLAST of mRNA_L-elsbetiae_contig5952.14441.1 vs. uniprot
Match: A0A7S4DWY5_9EUKA (Hypothetical protein n=2 Tax=Lotharella TaxID=74819 RepID=A0A7S4DWY5_9EUKA) HSP 1 Score: 138 bits (347), Expect = 2.410e-32 Identity = 87/270 (32.22%), Postives = 151/270 (55.93%), Query Frame = 1 Query: 10 VLQKCSEAIRIVQEYDGCGSVIRRSMSAPRDEGLESAATAALLPNVEKIRNFFEIARAMEQMMPVLLRRLAELASIVERPL-----LACKLTELLQVVLEWDQLKMMRPQIQNDFATYRRFLSRLKREEEAGLLSKLPVADTDANAISMFIAENVPMMCVLAKVTAKTAIDVPRVRSVIATVANMCCGMVHRRVYKSDATSRKLLMAMTSAAVLYDRITDSGVFVKRSHVGVSKCIKVLNKHGGATGEQLRATLRYSTMHYNSETTPKNI 804 +L +C + + ++ EY C + ++MS+P +E E A +ALL +V+ ++ F++ + +++ +PVLL L++ A ++ L L + +L VL +DQ++MMRP + NDF+ YRR+L + R + + V +A+A+++F A + PMM L+ TA+ V + ++ +AN C M+ + + S T++ + AM A VL+D + SGVF K S V + IK L K L AT+RYS+ ++ ETTP +I Sbjct: 58 ILDQCPKVLSLINEYKDCTQLCSKAMSSPSEES-EEKAFSALLKSVKSVKVFYDFSNDLKKCVPVLLNELSKPAEETKQTLQDQQALVKQFANILDFVLTFDQIRMMRPHLSNDFSYYRRYLPKFSRRPD------IDVKADEASAMALFTARHCPMMVSLSSATAECLEQNRHVTNAMSAMANACLAMLKNKRFSSVDTNKYVARAMVGAVVLFDHVYPSGVFYK-SPVDIKGIIKFLKK-AEFDAVSLLATIRYSSKNFKHETTPSSI 318
BLAST of mRNA_L-elsbetiae_contig5952.14441.1 vs. uniprot
Match: A0A0H5RBK7_9EUKA (DUF1394 domain-containing protein n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5RBK7_9EUKA) HSP 1 Score: 135 bits (339), Expect = 2.040e-31 Identity = 86/276 (31.16%), Postives = 154/276 (55.80%), Query Frame = 1 Query: 10 VLQKCSEAIRIVQEYDGCGSVIRRSMSAPRDEGLESAATAALLPNVEKIRNFFEIARAMEQMMPVLLRRLA---ELASIVERPLLACKLTELLQVVLEWDQLKMMRPQIQNDFATYRRFLSRLKREEEAGLLSKLPVADTDANAISMFIAENVPMMCVLAKVTAKTAIDVPRVRSVIATVANMCCGMVHRRVYKSDATSRKLLMAMTSAAVLYDRIT-DSGVFVKRSHVGVSKCIKVLNKHGGATGEQLRATLRYSTMHYNSETTPKNIRNALEIE 825 +L + +++ Y CG+ IR+++S P + E A A+ NV+ I F+ ++ + ++ LL+ LA E + + LL VL +D+LKM RP IQNDF+ YRR L++ + + + V D +A+ IS++IA+++PMM LAK T+ + P V +A +N+C ++ + ++S T++ L M A VL+D I+ + G FVK+S + + + ++++ K +T L LRYST+H+ ++TP IR+ L+++ Sbjct: 40 ILSRSYRMTEMLEAYCNCGTYIRKALSEPSSKS-ELEAFLAVKLNVDVISAFYTYSKEVANIVRDLLKFLATGQEKEAFCSHQYSVKQFGRLLDFVLRFDELKMQRPGIQNDFSYYRRVLAKHANDPD------IKVRDEEASFISLYIAQSIPMMSALAKATSSLYVSNPNVPQALALTSNVCLELLKSKRFQSPETNQLLTRIMVGAIVLFDHISLEGGAFVKKSGINIKQAVQLVVKEYPSTSS-LTNMLRYSTLHFADDSTPNGIRSLLDVD 307
BLAST of mRNA_L-elsbetiae_contig5952.14441.1 vs. uniprot
Match: UPI00140276CB (protein FAM49B-like n=1 Tax=Petromyzon marinus TaxID=7757 RepID=UPI00140276CB) HSP 1 Score: 135 bits (339), Expect = 3.050e-31 Identity = 93/289 (32.18%), Postives = 152/289 (52.60%), Query Frame = 1 Query: 1 ITLVLQKCSEAIRIVQEYDGCGSVIRRSMSAPRDEGLESAATAALLPNVEKIRNFFEIA----RAMEQMMPVLLRRLAELASIVERP-LLACKLTELLQVVLEWDQLKMMRPQIQNDFATYRRFLSRLKR-EEEAGLLSKLPVADTDANAISMFIAENVPMMCVLAKVTAK------TAIDVPRVRSVIATVANMCCGMVHRRVYK----SDATSRKLLMAMTSAAVLYDRITDSGVFVKRSHVGVSKCIKVLNKHGGATGEQLRATLRYSTMHYNSETTPKNIRNALE 819 + VL + +++Y G GS IR ++S P DE + AA+ P V K++ F+E + RAM +++ VL +ER LA + ++L L++D+LKM P +QNDF+ YRR LSR++ AG ++ V++ AN +S+F AE+ PM+ L+ T + + + + ++T+A++C M+ Y+ S+ + L M +LYD + G F K S + + CIKVL + A+ E L LRY+T H N ET+ K I+N L+ Sbjct: 40 VNAVLSVAETLLSELRDYPGAGSEIREAISHPEDEAAQGRVWAAVCPLVSKLKGFYEFSVQLERAMVRLLEVLTAPPCTPVQHLEREQALAKQFAQILHFTLQFDELKMTNPSVQNDFSFYRRTLSRMRMTNSNAG--TEAEVSNEMANRMSLFYAESTPMLKTLSNATTRFVSEHESVVPLENTTDCLSTMASLCKAMLDTPEYRCRFGSEDSMLFCLRVMVGLIILYDHVHPVGAFAKTSKLDMKGCIKVLKEQPQASVEGLLNALRYTTRHINDETSCKQIKNMLQ 326
BLAST of mRNA_L-elsbetiae_contig5952.14441.1 vs. uniprot
Match: A0A4P9XN17_9FUNG (DUF1394 domain-containing protein n=1 Tax=Thamnocephalis sphaerospora TaxID=78915 RepID=A0A4P9XN17_9FUNG) HSP 1 Score: 134 bits (338), Expect = 3.710e-31 Identity = 104/291 (35.74%), Postives = 154/291 (52.92%), Query Frame = 1 Query: 4 TLVLQKCSEAIRIV---QEYDGCGSVIRRSMSAPRDEGLESAATAALLPNVEKIRNFFEIARAMEQMMPVLLRRL--------AELASIV-----ERPLLACKLTELLQVVLEWDQLKMMRPQIQNDFATYRRFLSRLKREEEAGLLSKLPVADTDANAISMFIAENVPMMCVLAKVTAKTAIDVP---RVRSVIATVANMCC-GMVHRRVYKSDATSRKLLMAMTSAAVLYDRITDSGVFVKRSHVGVSKCIKVLNKHGGATGEQLRATLRYSTMHYNSETTPKNIRNAL 816 T VL +RI+ +EY GC IR+++S P E E AA A+ P VE++R F+E A A+E +P LL + +E +IV RP L ++L V E+D+LKM P IQNDF+ YRR L+RLK + + + + V D AN +S+F A + PM+ + V +K P R V+A +A +C +V R+ DA + L + AVLYD I +GVFV+ S + + ++V N++ + A LRY+T H N E+TPK +R L Sbjct: 34 TYVLNLLRPTVRILATLREYQGCNEYIRQAISNPCPE-TEEAAWEAVCPAVERLREFYEYAAALEDAVPRLLADMIKVDGSSDSEDPAIVYRVLERRPALVRLFADVLDFVFEFDELKMGNPAIQNDFSYYRRTLNRLKMSSQMAMRTPV-VNDELANLMSLFYAHHTPMLKTVIDVASKFVSSRPDGFRGADVLAGLAGVCYHAIVKERLTHPDAIAF-CLRVQVACAVLYDHIHPAGVFVRTSPINIRNTVRVCNEYAPQQSSLVNA-LRYNTRHLNDESTPKALRQLL 320 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5952.14441.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5952.14441.1 >prot_L-elsbetiae_contig5952.14441.1 ID=prot_L-elsbetiae_contig5952.14441.1|Name=mRNA_L-elsbetiae_contig5952.14441.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=249bp MSAPRDEGLESAATAALLPNVEKIRNFFEIARAMEQMMPVLLRRLAELASback to top mRNA from alignment at L-elsbetiae_contig5952:5450..10636+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5952.14441.1 ID=mRNA_L-elsbetiae_contig5952.14441.1|Name=mRNA_L-elsbetiae_contig5952.14441.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5187bp|location=Sequence derived from alignment at L-elsbetiae_contig5952:5450..10636+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5952:5450..10636+ >mRNA_L-elsbetiae_contig5952.14441.1 ID=mRNA_L-elsbetiae_contig5952.14441.1|Name=mRNA_L-elsbetiae_contig5952.14441.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1494bp|location=Sequence derived from alignment at L-elsbetiae_contig5952:5450..10636+ (Laminarionema elsbetiae ELsaHSoW15)back to top |