mRNA_L-elsbetiae_contig5951.14440.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5951.14440.1 vs. uniprot
Match: D8LSG1_ECTSI (Purple acid phosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSG1_ECTSI) HSP 1 Score: 218 bits (555), Expect = 1.270e-60 Identity = 146/304 (48.03%), Postives = 165/304 (54.28%), Query Frame = 3 Query: 198 SSFGMATPPVTPPLSXXXXXXXXXXXXXXXSYHMSNSIDGRSGGRKRLLTRKNLVGNAFG--------------RGNDVLAGYGERPYGEVAPSFSP-SRPSASSCLCGDGYGNGDSGDDQSGHGRRAIPPRLLRPPAFPPTKTPKSPLDGSSGRPRXXXXXXXXRFSSRCLLVVGLCLATAYLTFKAVWWLQWQARCVEGCYDPSAAKTGSRGPEQVHIAYSGADADRNPTGMAVVWTTAAGEAPPVVEYGLSKDDLSLTAAGTSVSYLDTVHHRAPLEGLAPGTRFFYRCGNPSFHPSYAAA 1064 SSF ATPP TPPLS S H S RKR RK L G GN+ + G R G P S A + C G+ + DD G G + P PA RPR SSRCLLV LCL A+ +FK VW+ QWQARCVEGCYD A+KTGS+GPEQVH+AY G DA+ NPTG+ VVWTTAAGEAPPVVEYGLS+ +L+LTA G+SV YLDTVHHRAPLE LAPGTRFFYRCGNPS P+ AAA Sbjct: 31 SSFRKATPPATPPLSLASSHGIGGDC----SCHSS---------RKRPR-RKTLGGPIIHSGCXXXXXXXXXGINGNNDVGGVDYRYGGSSPPPPSQHGHRHARTGFCRYAEGDSECDDDSMGGGGNKLGPPTGMTPAI--------------KRPRRRRVRCC--LSSRCLLVACLCLVVAWGSFKIVWYFQWQARCVEGCYDAEASKTGSQGPEQVHLAYGGVDAEGNPTGVTVVWTTAAGEAPPVVEYGLSRAELNLTAHGSSVRYLDTVHHRAPLEDLAPGTRFFYRCGNPS-SPTAAAA 303
BLAST of mRNA_L-elsbetiae_contig5951.14440.1 vs. uniprot
Match: A0A6H5KTZ0_9PHAE (Purple acid phosphatase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTZ0_9PHAE) HSP 1 Score: 211 bits (538), Expect = 4.640e-58 Identity = 99/128 (77.34%), Postives = 110/128 (85.94%), Query Frame = 3 Query: 657 SRCLLVVGLCLATAYLTFKAVWWLQWQARCVEGCYDPSAAKTGSRGPEQVHIAYSGADADRNPTGMAVVWTTAAGEAPPVVEYGLSKDDLSLTAAGTSVSYLDTVHHRAPLEGLAPGTRFFYRCGNPS 1040 SRCLLV LCL A+ +FK W+ QWQA CVEGCYD AAKTGS+GPEQVH+AY G DA+ NPTG+ VVWTTAAGEAPPVVEYGLS+D+L+LTA G+SV YLDTVHHRAPLE LAPGTRFFYRCGNPS Sbjct: 210 SRCLLVACLCLVVAWGSFKIAWYFQWQAWCVEGCYDAEAAKTGSQGPEQVHLAYGGVDAEGNPTGVTVVWTTAAGEAPPVVEYGLSRDELNLTAHGSSVRYLDTVHHRAPLEDLAPGTRFFYRCGNPS 337
BLAST of mRNA_L-elsbetiae_contig5951.14440.1 vs. uniprot
Match: A0A5D6YGD4_9STRA (Purple acid phosphatase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YGD4_9STRA) HSP 1 Score: 61.2 bits (147), Expect = 1.340e-6 Identity = 39/96 (40.62%), Postives = 52/96 (54.17%), Query Frame = 3 Query: 768 SAAKTGSRGPEQVHIAYSGADADRNPTGMAVVWTTAAGEAPPVVEYGLSKDDLSLTAAGT-SVSYLDT-----VHHRAPLEGLAPGTRFFYRCGNP 1037 SAA + PEQ+H+A++GADA +GM V W TAA V G D L++ A S SY V H A L GL+P T++FY+ G+P Sbjct: 17 SAAFDARQVPEQLHLAFAGADAG---SGMTVSWATAAATPDAAVWLGTVADALAVADARVQSASYFSEGDYTLVQHHATLRGLSPSTKYFYKVGSP 109
BLAST of mRNA_L-elsbetiae_contig5951.14440.1 vs. uniprot
Match: F2UJ11_SALR5 (Purple acid phosphatase n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UJ11_SALR5) HSP 1 Score: 61.2 bits (147), Expect = 1.370e-6 Identity = 34/91 (37.36%), Postives = 53/91 (58.24%), Query Frame = 3 Query: 795 PEQVHIAYSGADADRNPTGMAVVWTTAAGEAPPVVEYGLSKDDLSLTAAGTSVSYLD---TVH-HRAPLEGLAPGTRFFYRCGNPSFHPSY 1055 PEQ+H++ + + + M V+W+T PVV+YGLS D+L++TA T+ SY H + A + GL P T ++YR G+P+ P Y Sbjct: 126 PEQIHLSIT-----TDISEMVVMWSTLKATPHPVVQYGLSSDNLNMTANATTASYTSGGWQGHLYTATMTGLRPKTTYYYRVGDPTVAPDY 211
BLAST of mRNA_L-elsbetiae_contig5951.14440.1 vs. uniprot
Match: A0A2V9I8L6_9BACT (Uncharacterized protein n=3 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V9I8L6_9BACT) HSP 1 Score: 57.4 bits (137), Expect = 2.010e-5 Identity = 33/84 (39.29%), Postives = 48/84 (57.14%), Query Frame = 3 Query: 795 PEQVHIAYSGADADRNPTGMAVVWTTAAGEAPPVVEYGLSKDDLSLTAAGTSVSY--LDTVHHRAPLEGLAPGTRFFYRCGNPS 1040 P Q+ ++++G+ T M ++W TA VVEYG + ++L A G VSY V H +EGL PGTR+FYR G+P+ Sbjct: 51 PTQLRLSWTGSPK----TSMTIMWQTALPTESSVVEYGTT-EELGQRAVGKGVSYKYATGVLHEVAVEGLQPGTRYFYRAGDPA 129
BLAST of mRNA_L-elsbetiae_contig5951.14440.1 vs. uniprot
Match: A0A832JCX1_9BACT (Fibronectin type-III domain-containing protein (Fragment) n=1 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=A0A832JCX1_9BACT) HSP 1 Score: 57.0 bits (136), Expect = 2.070e-5 Identity = 35/83 (42.17%), Postives = 45/83 (54.22%), Query Frame = 3 Query: 795 PEQVHIAYSGADADRNPTGMAVVWTTAAGEAPPVVEYGLSKDDLSLTAAGTSVSY--LDTVHHRAPLEGLAPGTRFFYRCGNP 1037 P+Q+H+A+ D T ++VVW T + VVEYG S L A G V Y +V H L GL PGTR+FYR G+P Sbjct: 25 PQQIHLAWG----DDPQTSVSVVWQTERPTSSSVVEYG-STPRLGQRALGREVRYPYSPSVFHEVLLRGLQPGTRYFYRVGDP 102
BLAST of mRNA_L-elsbetiae_contig5951.14440.1 vs. uniprot
Match: G0MR96_CAEBE (Purple acid phosphatase n=1 Tax=Caenorhabditis brenneri TaxID=135651 RepID=G0MR96_CAEBE) HSP 1 Score: 56.2 bits (134), Expect = 4.710e-5 Identity = 35/92 (38.04%), Postives = 47/92 (51.09%), Query Frame = 3 Query: 786 SRGPEQVHIAYSGADADRNPTGMAVVWTTA--AGEAPPVVEYGLSKDDLSLTAAGTSVSYLDT-------VHHRAPLEGLAPGTRFFYRCGN 1034 S+ EQVH++ SG NP M V W T P V +GL+KDDL LTA G S + D HRA ++ L PG ++Y+ G+ Sbjct: 19 SKKVEQVHLSLSG-----NPDEMVVTWLTQDPLPNVTPYVAFGLTKDDLRLTAKGVSTGWADQGKHGVMRYTHRATMQKLVPGQLYYYQVGS 105
BLAST of mRNA_L-elsbetiae_contig5951.14440.1 vs. uniprot
Match: A0A1D1VKD8_RAMVA (Purple acid phosphatase n=1 Tax=Ramazzottius varieornatus TaxID=947166 RepID=A0A1D1VKD8_RAMVA) HSP 1 Score: 55.8 bits (133), Expect = 7.040e-5 Identity = 30/87 (34.48%), Postives = 47/87 (54.02%), Query Frame = 3 Query: 795 PEQVHIAYSGADADRNPTGMAVVWTTAAGEAPPVVEYGLSKDDLSLTAAGTSVSYLD--TVH-----HRAPLEGLAPGTRFFYRCGN 1034 PEQ+H+++SG NPT M V W T A V +G+ L+ +G S +++D H HRA ++ L PG R++Y+ G+ Sbjct: 34 PEQIHLSWSG-----NPTEMYVTWATPRASAVSSVRFGMDNKTLTSNISGESTTFVDGAVAHKVRYIHRATMQYLQPGNRYYYQVGS 115 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5951.14440.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5951.14440.1 >prot_L-elsbetiae_contig5951.14440.1 ID=prot_L-elsbetiae_contig5951.14440.1|Name=mRNA_L-elsbetiae_contig5951.14440.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=355bp MASKHGSVSRNVSLEQLDEETVGLEMRQLGYSSSTQSESDPVVNIKRVSSback to top mRNA from alignment at L-elsbetiae_contig5951:4466..8853- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5951.14440.1 ID=mRNA_L-elsbetiae_contig5951.14440.1|Name=mRNA_L-elsbetiae_contig5951.14440.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4388bp|location=Sequence derived from alignment at L-elsbetiae_contig5951:4466..8853- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5951:4466..8853- >mRNA_L-elsbetiae_contig5951.14440.1 ID=mRNA_L-elsbetiae_contig5951.14440.1|Name=mRNA_L-elsbetiae_contig5951.14440.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2130bp|location=Sequence derived from alignment at L-elsbetiae_contig5951:4466..8853- (Laminarionema elsbetiae ELsaHSoW15)back to top |