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|
Homology
BLAST of mRNA_L-elsbetiae_contig5940.14429.1 vs. uniprot
Match: A0A6H5KXK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXK5_9PHAE) HSP 1 Score: 145 bits (365), Expect = 5.880e-34 Identity = 89/165 (53.94%), Postives = 109/165 (66.06%), Query Frame = 2
Query: 896 ASRETGTQGAAEVVDCLLRWGADETVVNADGNAAADVIGINVGEDDSSDEGLEVAEDVERMRELLTNAPADRAWRRRGYMVLCRAHPDRIQPIRESSSAT--AGVAGSTRSGTTCKLARTEASGFAGTAGGSTASERTSGDWAGLVAMALGLREEGVFRAIVGYL 1384
A R+ G QGAAEVV+ LLR GADET+ N GN A D+IG +V E+D + EDVER+RELL NAPADRAWRRRGY+++CRA PDR+ P R +S T VA TRS K+AR G AG ST E T G+WA +V+ + L+EEG+FR IV YL
Sbjct: 250 AGRQAGRQGAAEVVNSLLRAGADETIANVQGNKAVDMIGEDVEEEDR------LTEDVERVRELLANAPADRAWRRRGYLIMCRAQPDRV-PERRMTSGTHYTNVARRTRS--RAKMARAR-----GIAGESTVDESTGGNWAVVVSKVISLQEEGIFRTIVEYL 400
BLAST of mRNA_L-elsbetiae_contig5940.14429.1 vs. uniprot
Match: D7G981_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G981_ECTSI) HSP 1 Score: 102 bits (255), Expect = 1.170e-19 Identity = 74/161 (45.96%), Postives = 101/161 (62.73%), Query Frame = 2
Query: 911 GTQGAAEVVDCLLRWGADETVVNADGNAAADVIGINVGEDDSSDEGLEVAEDVERMRELLTNAPADRAWRRRGYMVLCRAHPDRIQPIRESSSAT--AGVAGSTRSGTTCKLARTEASGFAGTAG-GSTASERTSGDWAGLVAMALGLREEGVFRAIVGYL 1384
G +GA EVVD LLRW ADET +A G+ +++G E DS + +V+R+ +LL AP DRAWRRRG +VLCRAHP+R+ +R+++S + V TRS T KL E AG +G G+ A RT+ +W+ +V LGL +EG+FR IVGYL
Sbjct: 251 GDEGAVEVVDLLLRWNADETDDDAYGHTPGNIVGCMTPETDS------MFVNVQRVWKLLQYAPQDRAWRRRGMLVLCRAHPERLG-LRQNASHVQESTVLRVTRSRT--KLVEREQ--VAGGSGEGAAADGRTAREWSNMVYRVLGL-DEGIFRTIVGYL 399
BLAST of mRNA_L-elsbetiae_contig5940.14429.1 vs. uniprot
Match: D7G1U1_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1U1_ECTSI) HSP 1 Score: 97.4 bits (241), Expect = 6.510e-18 Identity = 67/155 (43.23%), Postives = 73/155 (47.10%), Query Frame = 2
Query: 920 GAAEVVDCLLRWGADETVVNADGNAAADVIGINVGEDDSSDEGLEVAEDVERMRELLTNAPADRAWRRRGYMVLCRAHPDRIQPIRESSSATAGVAGSTRSGTTCKLARTEASGFAGTAGGSTASERTSGDWAGLVAMALGLREEGVFRAIVGYL 1384
G+A+VVD LLRWGADET+V+ G AAD IG ED ER R LL APADRAWRRRG +VLCRAHPDR+Q GD AGLVA GL E GVFR IV YL
Sbjct: 288 GSAQVVDLLLRWGADETIVSKQGETAADSIGTRRCHRTDP-------EDDERARSLLARAPADRAWRRRGLLVLCRAHPDRLQ--------------------------------------------LGGDLAGLVAGVGGLEEVGVFRTIVLYL 391
BLAST of mRNA_L-elsbetiae_contig5940.14429.1 vs. uniprot
Match: A0A6H5JHY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY9_9PHAE) HSP 1 Score: 99.8 bits (247), Expect = 7.450e-18 Identity = 73/173 (42.20%), Postives = 96/173 (55.49%), Query Frame = 2
Query: 905 ETGTQGAAEVVDCLLRWGADETVVNADGNAAADVIGINVGEDDSSDEGLEVAEDVERMRELLTNAPADRAWRRRGYMVLCRAH--PDRIQ-PIRESSSATAGVAGSTRSGTTCKLARTEASGFAGTAGGSTASERTSGDWAGLVAMALG-------LREEG---VFRAIVGYL 1384
+ G+ G AE+VD LLR GADET V+ +G+ AAD++ + E DS +AEDV+R+R+LL APADRAWRRRG+++L RAH R+Q R S + AGVA TRS S R DWAG+V+M +G L +G +F IVGYL
Sbjct: 632 KAGSPGTAEMVDLLLRRGADETAVSENGHTAADMVVLKTEESDS------LAEDVDRVRKLLARAPADRAWRRRGFLILSRAHYPGGRVQFGHRTSQAPAAGVAKRTRS--------------------SEEPSRAEIDWAGVVSMLMGDGVDPISLMGDGANLIFEKIVGYL 778
BLAST of mRNA_L-elsbetiae_contig5940.14429.1 vs. uniprot
Match: D7FKL4_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKL4_ECTSI) HSP 1 Score: 94.7 bits (234), Expect = 4.580e-17 Identity = 64/158 (40.51%), Postives = 80/158 (50.63%), Query Frame = 2
Query: 911 GTQGAAEVVDCLLRWGADETVVNADGNAAADVIGINVGEDDSSDEGLEVAEDVERMRELLTNAPADRAWRRRGYMVLCRAHPDRIQPIRESSSATAGVAGSTRSGTTCKLARTEASGFAGTAGGSTASERTSGDWAGLVAMALGLREEGVFRAIVGYL 1384
G QG EVVD LLRWGADET V +G AAD IG+ V E+D + E+ E +R+LL NAPADRAWRRR +VLCRA PD++Q + ++AR E A LGL EEG+FR IV ++
Sbjct: 274 GKQGIVEVVDLLLRWGADETHVAGNGMRAADAIGMKVPEEDR------IPEEFEGVRKLLANAPADRAWRRRCSLVLCRARPDKMQLSSD------------------RIARLE-------------------------ARVLGLVEEGIFRTIVRFI 382
BLAST of mRNA_L-elsbetiae_contig5940.14429.1 vs. uniprot
Match: D8LB27_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB27_ECTSI) HSP 1 Score: 95.9 bits (237), Expect = 5.420e-17 Identity = 62/150 (41.33%), Postives = 85/150 (56.67%), Query Frame = 2
Query: 935 VDCLLRWGADETVVNADGNAAADVIGINVGEDDSSDEGLEVAEDVERMRELLTNAPADRAWRRRGYMVLCRAHPDRIQPIRESSSATAGVAGSTRSGTTCKLARTEASGFAGTAGGSTASERTSGDWAGLVAMALGLREEGVFRAIVGYL 1384
V+ LLRWGADET N +G+ ADVIG+ D +DE +V D +R+R +L APADR+WRRRG++VL R+ P R+Q + S R+ K+AR G A + + DW GLV LGL +G+FR +VG+L
Sbjct: 367 VELLLRWGADETCSNDNGDVPADVIGV-YDRGDVNDE--DVKADHKRIRRMLARAPADRSWRRRGWLVLSRSCPTRVQIANKGSRVN-------RNSCPAKVARVSGEDLGGDE--EEAENQMTVDWGGLVGSLLGLEADGLFRLVVGFL 504
BLAST of mRNA_L-elsbetiae_contig5940.14429.1 vs. uniprot
Match: D7FYD0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYD0_ECTSI) HSP 1 Score: 92.8 bits (229), Expect = 2.970e-16 Identity = 69/165 (41.82%), Postives = 95/165 (57.58%), Query Frame = 2
Query: 896 ASRETGTQGAAEVVDCLLRWGADETVVNADGNAAADVIG--INVGEDDSSDEGLEVAEDVERMRELLTNAPADRAWRRRGYMVLCRAHPDRIQPIRESSSATAGVAGSTRSGTTCKLARTEASGFAGTAGGSTASERTSGDWAGLVAMALGLREEGVFRAIVGYL 1384
A+ G QG+AE+VD LLR GADET + +G AD +G + +G+ + + +V + ELL NAPADRAWRRRG +VLCRA R + +E T G S R+ + KLAR++A G AG G T T +W + L EEG+FR++VG+L
Sbjct: 268 AASYAGRQGSAELVDLLLRRGADETTPDRNGQQPADRVGHCMELGD-------VLLGHEVVLVHELLANAPADRAWRRRGLLVLCRAWLRRSRLRQEDGGDTRGGL-SRRTRSRAKLARSDAVG-AGCRRG-TPEGGTGDEWRSASKRVVELEEEGIFRSVVGFL 422
BLAST of mRNA_L-elsbetiae_contig5940.14429.1 vs. uniprot
Match: D7G137_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G137_ECTSI) HSP 1 Score: 91.3 bits (225), Expect = 6.770e-16 Identity = 65/156 (41.67%), Postives = 74/156 (47.44%), Query Frame = 2
Query: 917 QGAAEVVDCLLRWGADETVVNADGNAAADVIGINVGEDDSSDEGLEVAEDVERMRELLTNAPADRAWRRRGYMVLCRAHPDRIQPIRESSSATAGVAGSTRSGTTCKLARTEASGFAGTAGGSTASERTSGDWAGLVAMALGLREEGVFRAIVGYL 1384
+G+ +VV LLRWGADET+V G AAD IG S++ G D ER R LLT APADRAWRRRG +VLC A+PDR+Q GD AGLV LGL E GVFR IV YL
Sbjct: 283 RGSVQVVGLLLRWGADETIVCKQGKTAADRIGTR--RFPSTEPG-----DDERARSLLTRAPADRAWRRRGLLVLCHAYPDRLQ--------------------------------------------LGGDLAGLVDRVLGLEEVGVFRTIVLYL 387
BLAST of mRNA_L-elsbetiae_contig5940.14429.1 vs. uniprot
Match: D7G692_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G692_ECTSI) HSP 1 Score: 92.4 bits (228), Expect = 9.860e-16 Identity = 61/157 (38.85%), Postives = 92/157 (58.60%), Query Frame = 2
Query: 926 AEVVDCLLRWGADETVVNADGNAAADVIG-----INVGEDDSSDEGLEVAEDVERMRELLTNAPADRAWRRRGYMVLCRAHPDRIQPIRESSSATAGVAGSTRSGTTCKLART--EASGFAGTAGGSTASERTSGDWAGLVAMALGLREEGVFRAIV 1375
A VD LLRWGAD+T+V+ +G AAD +G ++ EDD S + ++ D +R R +L AP DR WRRRG++VLCR++P ++Q +++SSS+++G + T K AR E SG G G + + LV +GL+ + VFR +V
Sbjct: 417 AAAVDLLLRWGADDTIVDGEGETAADEVGTWDPEVHSNEDDGSIDDDKLKADGQRTRLILACAPVDRLWRRRGWLVLCRSYPTKVQILKDSSSSSSGCS-------TAKAARVSEEDSGECGDEDG----DEARIELGRLVGHIVGLQADVVFRMVV 562
BLAST of mRNA_L-elsbetiae_contig5940.14429.1 vs. uniprot
Match: A0A6H5KNU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNU3_9PHAE) HSP 1 Score: 91.3 bits (225), Expect = 1.410e-15 Identity = 51/109 (46.79%), Postives = 70/109 (64.22%), Query Frame = 2
Query: 896 ASRETGTQGAAEVVDCLLRWGADETVVNADGNAAADVIGINVGEDDSSDEGLEVA------EDVERMRELLTNAPADRAWRRRGYMVLCRAHPDRIQPIRESSSATAGV 1204
A+R+ G QG +VD LLR GADET +N DG AA+V+G ++ E A +D+ER+R+LL NAPADRAWRRRG +VLCRA + + +R +SS+ G+
Sbjct: 261 AARQAGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHI----------EYAACPLNKQDLERVRDLLENAPADRAWRRRGLLVLCRAFWIKSRRLRAASSSARGI 359
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 102.4 |
| Seed ortholog evalue | 4.7e-19 |
| Seed eggNOG ortholog | 2880.D7G981 |
| KEGG ko | ko:K21440 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0001508,GO:0002027,GO:0002262,GO:0002376,GO:0002520,GO:0003008,GO:0003012,GO:0003013,GO:0003015,GO:0003205,GO:0003230,GO:0003279,GO:0003283,GO:0003674,GO:0005198,GO:0005200,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005783,GO:0005829,GO:0005856,GO:0005886,GO:0005911,GO:0005938,GO:0006725,GO:0006778,GO:0006779,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006873,GO:0006874,GO:0006875,GO:0006887,GO:0006888,GO:0006928,GO:0006936,GO:0006937,GO:0006941,GO:0006942,GO:0006996,GO:0007009,GO:0007010,GO:0007154,GO:0007163,GO:0007165,GO:0007267,GO:0007275,GO:0007507,GO:0008015,GO:0008016,GO:0008092,GO:0008093,GO:0008104,GO:0008150,GO:0008152,GO:0009058,GO:0009893,GO:0009987,GO:0010256,GO:0010468,GO:0010522,GO:0010604,GO:0010628,GO:0010638,GO:0010646,GO:0010880,GO:0010881,GO:0010882,GO:0010959,GO:0012505,GO:0014704,GO:0014731,GO:0015672,GO:0016020,GO:0016043,GO:0016192,GO:0016323,GO:0016528,GO:0016529,GO:0018130,GO:0019222,GO:0019438,GO:0019722,GO:0019725,GO:0019899,GO:0019900,GO:0019901,GO:0019932,GO:0022898,GO:0023051,GO:0023052,GO:0030001,GO:0030003,GO:0030011,GO:0030016,GO:0030017,GO:0030018,GO:0030029,GO:0030048,GO:0030054,GO:0030097,GO:0030099,GO:0030154,GO:0030218,GO:0030315,GO:0030424,GO:0030507,GO:0030673,GO:0030674,GO:0030863,GO:0031252,GO:0031253,GO:0031256,GO:0031430,GO:0031647,GO:0031672,GO:0031674,GO:0032409,GO:0032411,GO:0032412,GO:0032414,GO:0032501,GO:0032502,GO:0032589,GO:0032879,GO:0032940,GO:0032970,GO:0033013,GO:0033014,GO:0033036,GO:0033043,GO:0033267,GO:0033292,GO:0033365,GO:0034101,GO:0034394,GO:0034613,GO:0034641,GO:0034762,GO:0034764,GO:0034765,GO:0034767,GO:0035088,GO:0035090,GO:0035556,GO:0035637,GO:0036309,GO:0036371,GO:0042383,GO:0042391,GO:0042592,GO:0042692,GO:0042995,GO:0043005,GO:0043034,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043266,GO:0043268,GO:0043269,GO:0043270,GO:0043292,GO:0044057,GO:0044093,GO:0044237,GO:0044249,GO:0044271,GO:0044291,GO:0044304,GO:0044325,GO:0044422,GO:0044424,GO:0044425,GO:0044444,GO:0044448,GO:0044449,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0045197,GO:0045199,GO:0045202,GO:0045211,GO:0046483,GO:0046903,GO:0046907,GO:0048193,GO:0048468,GO:0048513,GO:0048518,GO:0048522,GO:0048534,GO:0048731,GO:0048821,GO:0048856,GO:0048869,GO:0048872,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050821,GO:0050896,GO:0051049,GO:0051050,GO:0051117,GO:0051128,GO:0051130,GO:0051179,GO:0051186,GO:0051188,GO:0051234,GO:0051239,GO:0051270,GO:0051279,GO:0051282,GO:0051641,GO:0051649,GO:0051716,GO:0051899,GO:0051924,GO:0051928,GO:0055001,GO:0055065,GO:0055072,GO:0055074,GO:0055076,GO:0055080,GO:0055082,GO:0055117,GO:0060047,GO:0060048,GO:0060090,GO:0060255,GO:0060306,GO:0060307,GO:0060341,GO:0061024,GO:0061061,GO:0061245,GO:0061337,GO:0061515,GO:0065007,GO:0065008,GO:0065009,GO:0070252,GO:0070296,GO:0070727,GO:0070838,GO:0070972,GO:0071704,GO:0071840,GO:0071944,GO:0072359,GO:0072503,GO:0072507,GO:0072511,GO:0072657,GO:0072659,GO:0086001,GO:0086002,GO:0086003,GO:0086004,GO:0086005,GO:0086010,GO:0086012,GO:0086014,GO:0086015,GO:0086018,GO:0086019,GO:0086026,GO:0086046,GO:0086065,GO:0086066,GO:0086070,GO:0086091,GO:0090257,GO:0097060,GO:0097458,GO:0098590,GO:0098771,GO:0098794,GO:0098900,GO:0098901,GO:0098907,GO:0098910,GO:0099080,GO:0099081,GO:0099512,GO:0099568,GO:0099623,GO:0120025,GO:0120038,GO:1901016,GO:1901018,GO:1901019,GO:1901021,GO:1901360,GO:1901362,GO:1901379,GO:1901381,GO:1901564,GO:1901566,GO:1901576,GO:1903115,GO:1903169,GO:1903522,GO:1903779,GO:1904062,GO:1904064,GO:1904427,GO:1990778,GO:2001257,GO:2001259 |
| EggNOG free text desc. | response to abiotic stimulus |
| EggNOG OGs | COG0666@1,KOG4177@2759 |
| COG Functional cat. | G |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko04131 |
| Exons | 2 |
| Model size | 2321 |
| Cds size | 1149 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622816643.3028507-UTR-L-elsbetiae_contig5940:473..711 | 1622816643.3028507-UTR-L-elsbetiae_contig5940:473..711 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig5940 474..711 + |
| 1691683707.1616495-UTR-L-elsbetiae_contig5940:473..711 | 1691683707.1616495-UTR-L-elsbetiae_contig5940:473..711 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig5940 474..711 + |
| 1622816643.3322587-UTR-L-elsbetiae_contig5940:1860..1866 | 1622816643.3322587-UTR-L-elsbetiae_contig5940:1860..1866 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig5940 1861..1866 + |
| 1691683707.1842422-UTR-L-elsbetiae_contig5940:1860..1866 | 1691683707.1842422-UTR-L-elsbetiae_contig5940:1860..1866 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig5940 1861..1866 + |
| 1622816643.3468895-UTR-L-elsbetiae_contig5940:4099..5027 | 1622816643.3468895-UTR-L-elsbetiae_contig5940:4099..5027 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig5940 4100..5027 + |
| 1691683707.19396-UTR-L-elsbetiae_contig5940:4099..5027 | 1691683707.19396-UTR-L-elsbetiae_contig5940:4099..5027 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig5940 4100..5027 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622816643.3183942-CDS-L-elsbetiae_contig5940:711..1860 | 1622816643.3183942-CDS-L-elsbetiae_contig5940:711..1860 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig5940 712..1860 + |
| 1691683707.1751084-CDS-L-elsbetiae_contig5940:711..1860 | 1691683707.1751084-CDS-L-elsbetiae_contig5940:711..1860 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig5940 712..1860 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5940.14429.1 >prot_L-elsbetiae_contig5940.14429.1 ID=prot_L-elsbetiae_contig5940.14429.1|Name=mRNA_L-elsbetiae_contig5940.14429.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=383bp
MPRTKTGRGRSGDGKALHAAVLGGHEEIVNDLLERGASVAAKDTDDRTPL
HVAAQGGKPTMVQLLMLRGADKDALDRTECTPLYLALCNGHVATALALLA
GDADASLPCSPFRDSVVHVAARLGHVEILRAVIAHGADVEATDFPARRTA
LHCAAMNNTAEAIDLLVGAGASIAARDQIGRTPLHFAATTASLEVLLALL
KHGADVNAQDSDRETPLHCASRETGTQGAAEVVDCLLRWGADETVVNADG
NAAADVIGINVGEDDSSDEGLEVAEDVERMRELLTNAPADRAWRRRGYMV
LCRAHPDRIQPIRESSSATAGVAGSTRSGTTCKLARTEASGFAGTAGGST
ASERTSGDWAGLVAMALGLREEGVFRAIVGYL* back to topmRNA from alignment at L-elsbetiae_contig5940:474..5027+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig5940.14429.1 ID=mRNA_L-elsbetiae_contig5940.14429.1|Name=mRNA_L-elsbetiae_contig5940.14429.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4554bp|location=Sequence derived from alignment at L-elsbetiae_contig5940:474..5027+ (Laminarionema elsbetiae ELsaHSoW15)
GGACTGTGGCTGGTTCATGCTCGACACCCTCTGCTCTCCTAAAGACGAAG
GCCAACATCTACATACTTCCGCAGCAGACACGTGGCAGCAGCCCCTTATG
GTCAAACCGGGAGGGACGAGAAGCACTTCGAGGAGCAGAGGAAGGAGCGT
TTGACCTCATTGCTCAAGCCTTGACGCCAGAAGAGTAGGCGGGACTGCTG
AGTGTTCCACTCGAGCGTACCGCGCGCCAAGGCAACAGATGCCCCGTACA
AAAACTGGTCGAGGCAGGAGCGGGGACGGTAAGGCCCTGCATGCAGCCGT
TCTAGGCGGCCATGAAGAGATCGTGAATGACCTACTGGAACGTGGAGCAT
CTGTCGCTGCCAAAGACACGGATGACAGAACCCCTCTACACGTTGCTGCT
CAAGGAGGGAAACCGACGATGGTGCAGTTGCTGATGCTCAGGGGAGCTGA
CAAAGACGCGTTGGACAGGACCGAATGTACGCCTCTTTATCTGGCATTGT
GCAACGGTCACGTGGCTACCGCACTAGCTCTTCTGGCTGGTGACGCGGAC
GCCAGCCTCCCTTGCAGCCCTTTCAGAGATTCGGTGGTCCACGTGGCGGC
CCGACTGGGCCATGTGGAGATATTGAGGGCGGTGATCGCACACGGGGCGG
ACGTCGAGGCTACTGACTTTCCAGCAAGAAGAACGGCACTCCATTGTGCC
GCCATGAACAACACGGCCGAGGCGATCGATCTGCTCGTGGGCGCTGGGGC
CAGCATCGCGGCACGCGATCAAATCGGCCGTACACCTCTCCATTTTGCTG
CCACCACAGCCAGTCTCGAAGTCTTGTTGGCCCTGTTGAAGCATGGTGCT
GACGTCAACGCCCAAGACAGCGACCGAGAAACGCCGTTGCACTGTGCATC
ACGCGAAACCGGGACGCAAGGAGCTGCAGAGGTGGTGGACTGTCTGTTGA
GGTGGGGTGCGGACGAGACCGTTGTCAATGCCGATGGCAACGCGGCTGCA
GACGTGATCGGGATTAACGTGGGAGAAGATGACAGCAGTGACGAAGGCCT
AGAAGTTGCGGAGGATGTCGAGCGTATGCGTGAGCTGTTGACCAACGCCC
CGGCCGACAGAGCATGGCGTCGCCGGGGCTACATGGTTTTGTGCCGTGCT
CATCCCGACAGGATACAGCCCATACGGGAGAGCAGCAGTGCAACTGCCGG
TGTGGCAGGGAGTACTCGCAGCGGTACTACATGCAAGCTGGCAAGGACAG
AAGCGAGTGGTTTCGCTGGGACAGCGGGGGGTAGCACGGCGAGCGAACGG
ACAAGCGGCGACTGGGCCGGTTTGGTGGCGATGGCGCTGGGACTGCGGGA
AGAAGGTGTCTTTCGGGCGATCGTCGGGTATCTGTGACGCCTGGTGAGTG
CGCGTTATGTGGACATTAATTAGGCCATCACTTTGCAAGACAAACATCTC
GTATGTTCCCGTAGATATGCGCATCAGCTTGGGGCTACGCCTTAGTATGT
TTGCAACCGATATTGCAACATCCAGCATGCCATATTTAGGCGCGATAAAC
GAGTGCGTCCATTGTGTTTTGTCCACTCCTCGGAATATCACGTGAAACGA
CGCTATGCCGGTGATTCATACCCGCAGTTCTTGGTTTCGGCTGAACCACT
CCCCGATTGCCCACTGAAATCCGTATTCTCTTTTGTACCACTCAGAGTCT
GCGGCACGTTCTGATTTAGTCCTGGCCGCGACCAGAGGTGCTGAAATCCG
ACCCACTAAGTCTACTGAATTTGGTATCACCGCCGTGTATACAAAATATC
ACACTCTGTTGGCGATGTTTGGTGTGGCTAGACGATAACAGCCGGGTGAG
GCCAGCACTGTCGGCGAGGGTTAGCTCGCTGGTGTGTGCGTGTGAGCTTG
TGGGTCGAAAATGGTTTGCTGGTGACTCCTGGCCAGGCTTTGTTGATTGG
TGGTGGATGGTTGAGAGAGGGCAGGGCTCGCTGGCCTGCTCTCGCTCTCG
AAAATAAAATAAAACAATATCCAAGGGAGACCCTAACGTACCAATCTCTC
ACGGACCCCGGAAAGCTGGTCTATTCGGGGCAATTCACCCGAGATACTGT
CTGCGGTTATGCCGTGTATTCTGAACCGGCACTACTGCGCCGCAGCGCGG
TTTTGCTGATGCCAACCTTCTGGCTAATCGAACGTTGACTAGTCAGCGAC
AGCGAACAAACAAGGGCTCATTGCGATGCTGTCATTGTGTTGCCTGCTGC
ACGGAGCAACCTACGACGCATGGCCAATATCCCTGACACACTCTGGTCCG
TAATATAAGCCCTACGGAAAAATTGCAATATATACCCCATGCGGAAAAGT
GAGACACAAAAGGGCAACTTTAAGCAACTTGGAAGACTCTGAGTTGCTTG
TTTCAAAACAATACGACCCGGGGGTTAGTGGAGCAAAACAAATCATAAAT
TGGCAGGGGACACCCGGACGTTGTCCCCGGGTTTCTCCACTAGACTTGGG
AAAATTCGAAAATTCCACGTTTTCCTCCATAACTTCTAGTTGGCGAGGAC
TGCCTTCACACGATGTTTTGCCTCGGATTTGGAGCTCTCACGCCGATCTC
TCAAAACACGCCATATTTTGTGTCTTTCAAAGTTGCCAATTCTCGCCGCC
AATTCTCCCCGAAGTCTCTCTTTGCCAGCAGCCCCTGATTGTTACCCTCC
AGGAGGTCGCACATGGGGTGGTGCCGGAAATATACATTCAAACGGTTTAT
CTTTGATGTTTCGGAAGCACTTTCAGCACTAGAAATGCCCTTTACACTTC
GAGGAGGCCTCGATGGGGCACTACTGTATGCGCGCGGCGAGTCTGGTTAC
CGCAAATTTGGTACTGTTGTGTGCCGGTAGGACTGCGATTTTTATGTATT
TTAATGCCATTTGGAGAATTAGATGAGAGTAGCCTGAAATCGATGCAAAA
GTACTTTTCAAAAACTATTTAGACTATTGTATGTATATGTATGTTGTCTT
CACATTAAAAACCGTTCCGATCTCTCCATCCAGTACCTCTCAATGTCCGT
ACTAATCCAACACTTGATGCGGTCAATTCCCGTGGTCATAGGCTAACTTA
TACCCAAGAAAAGGTACACGAAAAATAAAATCGACCCGAAGGGCCAGCAA
AGCAATAATAAAACAGACATCGAATCTGGAGCCCTTCGCTCCCCTCTACA
CGCTATGTGAGGTAGAACAAAACTGGAACAGCCAACACCACTATCTTGGT
ACCCTACCAAAGCCGGGGGGTTCCGCGCCTGGTTCTTACCGGCCAGGCCC
GACAGGTCTACATAGTCCTCCCCCCGATTATCCCGCCCACCAACAGGGGA
TACAAAGAATAAAATATACTGTTAGCAGAATTTATTACCACAAATGTCCG
TACGGGGCTTTGATTGCGGACTAGAAGGGTATGTATTTAGTGGTTCGGCG
CCAAGTATGTAGTGTCTCAAAGGCTGTCGGTTTTTGTTCTTGACCGTAGG
CGAAACTCTACAAAACTCACGATTTTCCATCCCGACGAGGGAATGTGGGG
ATATGCTCACAATAGTCTTCTACCCTGCCTCCCTGCCCACCCGCTCACTT
CTCTGTGCTTCCGCCGTCGCCCGCAGGGCCTCGAACCCAGTGAGAGGACG
GTACGCGCGGCTACTCGGAGCATCTCGAGTGCATGGGGCGTAGGTTTCGT
GACCCACAGGTGGTTGACAGGCCCTTGGTGGACTCCGCGGTTCGTCGGCG
GCCATTTCGAGATTATAGTACCTGTGCCCATCAATCATAGTGCGGTAGTT
CTGTAGCCAAGGTATCACCGGAGTCCGAGTGACGCGTACGCATAGTCTGA
CAGCCAGGTCGATTCTCGCATGAGCTTTTGGGCGACGTTTTGGGCTTTGA
CATCCGTCACTTTACTAGGTCGTTTCCCGAAGTTTGGGACGGGTGGGGAT
GTGCCCGCAGAGGACAGAGCTATGTATGGGTTGTACGTTTGAGAACCATG
CAGGAGCCGCCTTAGAGCGAGGCAGTGTGAGAACCGTGCATAGCAATAAG
TAGAACAGCAGTTGTGCGGGGAGACAGAGGTCCCCACCCCGGACGAGTCT
CGCCGAGGGTGACCCTACGACCTGCTGTTGCTCCCGATCGAGCCTCAACA
GCAGGCCTAAGGGCAACCCGATGAGCTGTTTCGGGAATTGAAGCTTCGCG
CGTTGGATCTGTTGCAGCAGAGCAGTCGTGAGGCATCGCGTGCGCTCAGG
GCAAGGATCGAATCCATCCGACGTCCATGGAGCAGAAATATTCGTTGTGG
ATCTTCGGGTGGAGGTGGTGTCAGGTCTGCCCGGGGTTGGCCCTTGGGCC
AACACATGTTATCAGTCGTTTTTGCTGGGCAGGTCCTCGTGTATTTAGGT
GGTTTTCCTTGCGATCATCTTGGTTAAATAGTGATGGTGGTGGCGGTGGT
AGTGACATCTCTAGGAGGGGGTACGAGATACGAGGCGTAAACTTGTGCGG
TAGGTGTGGGTTTGGTTGTCTCATGCGTCTCGGAGGACGTGAAACGATAG
AACG back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig5940:474..5027+ >mRNA_L-elsbetiae_contig5940.14429.1 ID=mRNA_L-elsbetiae_contig5940.14429.1|Name=mRNA_L-elsbetiae_contig5940.14429.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2298bp|location=Sequence derived from alignment at L-elsbetiae_contig5940:474..5027+ (Laminarionema elsbetiae ELsaHSoW15)
ATGCCCCGTACAAAAACTGGTCGAGGCAGGAGCGGGGACGGTAAGGCCCT
GCATGCAGCCGTTCTAGGCGGCCATGAAGAGATCGTGAATGACCTACTGG
AACGTGGAGCATCTGTCGCTGCCAAAGACACGGATGACAGAACCCCTCTA
CACGTTGCTGCTCAAGGAGGGAAACCGACGATGGTGCAGTTGCTGATGCT
CAGGGGAGCTGACAAAGACGCGTTGGACAGGACCGAATGTACGCCTCTTT
ATCTGGCATTGTGCAACGGTCACGTGGCTACCGCACTAGCTCTTCTGGCT
GGTGACGCGGACGCCAGCCTCCCTTGCAGCCCTTTCAGAGATTCGGTGGT
CCACGTGGCGGCCCGACTGGGCCATGTGGAGATATTGAGGGCGGTGATCG
CACACGGGGCGGACGTCGAGGCTACTGACTTTCCAGCAAGAAGAACGGCA
CTCCATTGTGCCGCCATGAACAACACGGCCGAGGCGATCGATCTGCTCGT
GGGCGCTGGGGCCAGCATCGCGGCACGCGATCAAATCGGCCGTACACCTC
TCCATTTTGCTGCCACCACAGCCAGTCTCGAAGTCTTGTTGGCCCTGTTG
AAGCATGGTGCTGACGTCAACGCCCAAGACAGCGACCGAGAAACGCCGTT
GCACTGTGCATCACGCGAAACCGGGACGCAAGGAGCTGCAGAGGTGGTGG
ACTGTCTGTTGAGGTGGGGTGCGGACGAGACCGTTGTCAATGCCGATGGC
AACGCGGCTGCAGACGTGATCGGGATTAACGTGGGAGAAGATGACAGCAG
TGACGAAGGCCTAGAAGTTGCGGAGGATGTCGAGCGTATGCGTGAGCTGT
TGACCAACGCCCCGGCCGACAGAGCATGGCGTCGCCGGGGCTACATGGTT
TTGTGCCGTGCTCATCCCGACAGGATACAGCCCATACGGGAGAGCAGCAG
TGCAACTGCCGGTGTGGCAGGGAGTACTCGCAGCGGTACTACATGCAAGC
TGGCAAGGACAGAAGCGAGTGGTTTCGCTGGGACAGCGGGGGGTAGCACG
GCGAGCGAACGGACAAGCGGCGACTGGGCCGGTTTGGTGGCGATGGCGCT
GGGACTGCGGGAAGAAGGTGTCTTTCGGGCGATCGTCGGGTATCTGTGAA
TGCCCCGTACAAAAACTGGTCGAGGCAGGAGCGGGGACGGTAAGGCCCTG
CATGCAGCCGTTCTAGGCGGCCATGAAGAGATCGTGAATGACCTACTGGA
ACGTGGAGCATCTGTCGCTGCCAAAGACACGGATGACAGAACCCCTCTAC
ACGTTGCTGCTCAAGGAGGGAAACCGACGATGGTGCAGTTGCTGATGCTC
AGGGGAGCTGACAAAGACGCGTTGGACAGGACCGAATGTACGCCTCTTTA
TCTGGCATTGTGCAACGGTCACGTGGCTACCGCACTAGCTCTTCTGGCTG
GTGACGCGGACGCCAGCCTCCCTTGCAGCCCTTTCAGAGATTCGGTGGTC
CACGTGGCGGCCCGACTGGGCCATGTGGAGATATTGAGGGCGGTGATCGC
ACACGGGGCGGACGTCGAGGCTACTGACTTTCCAGCAAGAAGAACGGCAC
TCCATTGTGCCGCCATGAACAACACGGCCGAGGCGATCGATCTGCTCGTG
GGCGCTGGGGCCAGCATCGCGGCACGCGATCAAATCGGCCGTACACCTCT
CCATTTTGCTGCCACCACAGCCAGTCTCGAAGTCTTGTTGGCCCTGTTGA
AGCATGGTGCTGACGTCAACGCCCAAGACAGCGACCGAGAAACGCCGTTG
CACTGTGCATCACGCGAAACCGGGACGCAAGGAGCTGCAGAGGTGGTGGA
CTGTCTGTTGAGGTGGGGTGCGGACGAGACCGTTGTCAATGCCGATGGCA
ACGCGGCTGCAGACGTGATCGGGATTAACGTGGGAGAAGATGACAGCAGT
GACGAAGGCCTAGAAGTTGCGGAGGATGTCGAGCGTATGCGTGAGCTGTT
GACCAACGCCCCGGCCGACAGAGCATGGCGTCGCCGGGGCTACATGGTTT
TGTGCCGTGCTCATCCCGACAGGATACAGCCCATACGGGAGAGCAGCAGT
GCAACTGCCGGTGTGGCAGGGAGTACTCGCAGCGGTACTACATGCAAGCT
GGCAAGGACAGAAGCGAGTGGTTTCGCTGGGACAGCGGGGGGTAGCACGG
CGAGCGAACGGACAAGCGGCGACTGGGCCGGTTTGGTGGCGATGGCGCTG
GGACTGCGGGAAGAAGGTGTCTTTCGGGCGATCGTCGGGTATCTGTGA back to top
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