mRNA_L-elsbetiae_contig594.14424.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig594.14424.1 vs. uniprot
Match: D7G8M9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8M9_ECTSI) HSP 1 Score: 145 bits (365), Expect = 6.050e-41 Identity = 64/119 (53.78%), Postives = 79/119 (66.39%), Query Frame = 1 Query: 1 MEGVDLVEYFSLQAGEPAVAGRAEHVAMHAGYRFNFASAENMAMFQDQPSRYIPKWGGFCAWGISEEETWTRDNLGPPTNPDSWLVTADDELFLFRSDYNKDLFIEDIPGYTKAGNLRW 357 MEG DL YFSL+ G AV G EH A++ GY+F F SAEN AMF++ P YIP+WGGFC+WGIS E+ W D LGPP +P+ WL+T D L FRS+ F+ D+PG AGN W Sbjct: 103 MEGADLTRYFSLELGAAAVYGVEEHEALYNGYKFWFESAENKAMFEESPKSYIPQWGGFCSWGISREDWWNADELGPPADPNQWLITDDGGLHFFRSELPMSKFLGDVPGNIVAGNQIW 221
BLAST of mRNA_L-elsbetiae_contig594.14424.1 vs. uniprot
Match: D7G5N6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5N6_ECTSI) HSP 1 Score: 134 bits (338), Expect = 4.270e-37 Identity = 61/119 (51.26%), Postives = 81/119 (68.07%), Query Frame = 1 Query: 1 MEGVDLVEYFSLQAGEPAVAGRAEHVAMHAGYRFNFASAENMAMFQDQPSRYIPKWGGFCAWGISEEETWTRDNLGPPTNPDSWLVTADDELFLFRSDYNKDLFIEDIPGYTKAGNLRW 357 + G D+V YFSL+ GE A+ G E+ + GY F FASA+N A+F+ P YIP WGGFCA+GI+ E+ WT LGPP++P+SWL+T D+ L +FRS+ K F+EDIPG GN W Sbjct: 83 LNGADVVSYFSLKEGEAAMYGFEEYPVKYNGYTFLFASAQNKALFEASPLDYIPAWGGFCAYGIAAEDWWTVSTLGPPSDPNSWLITDDNVLRIFRSEVPKAYFMEDIPGNIATGNRIW 201
BLAST of mRNA_L-elsbetiae_contig594.14424.1 vs. uniprot
Match: A0A6H5JXZ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXZ9_9PHAE) HSP 1 Score: 115 bits (287), Expect = 3.820e-29 Identity = 57/120 (47.50%), Postives = 73/120 (60.83%), Query Frame = 1 Query: 1 MEGVDLVEYFSLQAGEPAVAGRAEHVAMHA-GYRFNFASAENMAMFQDQPSRYIPKWGGFCAWGISEEETWTRDNLGPPTNPDSWLVTADDELFLFRSDYNKDLFIEDIPGYTKAGNLRW 357 ++G DLV Y SLQ G V G E + GY F F++ EN F+ P +Y+P WGGFC++GIS E+ W D LGPP+NPD WL+ DD L+LFRS+ D F +D Y K GN W Sbjct: 113 VKGFDLVAYRSLQPGTHGVRGLWEFSVQYGQGYTFLFSTLENQLEFESDPEKYLPAWGGFCSFGISHEDIWGPDVLGPPSNPDIWLI-EDDRLYLFRSETPYDKFKDDKARYIKHGNQVW 231
BLAST of mRNA_L-elsbetiae_contig594.14424.1 vs. uniprot
Match: D7FW15_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW15_ECTSI) HSP 1 Score: 110 bits (274), Expect = 3.300e-27 Identity = 56/120 (46.67%), Postives = 70/120 (58.33%), Query Frame = 1 Query: 1 MEGVDLVEYFSLQAGEPAVAGRAEHVAMHA-GYRFNFASAENMAMFQDQPSRYIPKWGGFCAWGISEEETWTRDNLGPPTNPDSWLVTADDELFLFRSDYNKDLFIEDIPGYTKAGNLRW 357 +EG DLV Y SLQ G V G E + GY F F++ EN F+ P RY+P WGGFC +GIS E W D LGPP+NPD WL+ DD L+LFRS+ F+++ K GN W Sbjct: 113 VEGFDLVAYRSLQPGTHGVRGLWEFSVQYGQGYTFLFSTLENKLEFESDPERYLPAWGGFCGFGISHEVVWGPDVLGPPSNPDFWLI-EDDRLYLFRSETPYGKFMDNKARCIKHGNQMW 231
BLAST of mRNA_L-elsbetiae_contig594.14424.1 vs. uniprot
Match: A0A7S2FZR2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FZR2_9STRA) HSP 1 Score: 99.8 bits (247), Expect = 1.840e-23 Identity = 50/121 (41.32%), Postives = 72/121 (59.50%), Query Frame = 1 Query: 1 MEGVDLVEYFSLQAGEPAVAGRAEHVAMHAGYRFNFASAENMAMFQDQPSRYIPKWGGFCAWGISEEETWTRDNLGPPTNPDSWLVTADDELFLFRSDYNKDLFIE-DIPGYTKAGNLRWE 360 M+G DLVEYFSL++G G E + AGY F F + +NM F P+ Y+P++GGF A+ ISE+ +T D LGP NP+ W + DD+L+ F D + F + ++ K GN RW+ Sbjct: 85 MDGYDLVEYFSLESGANGRKGTEEFESTFAGYTFRFLNNKNMKAFGSMPTSYLPQFGGFDAYSISEDPWYTADTLGPGANPNVWKI-LDDKLYFFMFDTTMEKFQKGNMSATVKTGNERWD 204
BLAST of mRNA_L-elsbetiae_contig594.14424.1 vs. uniprot
Match: A0A7S3UVA0_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UVA0_HETAK) HSP 1 Score: 97.1 bits (240), Expect = 7.920e-23 Identity = 43/119 (36.13%), Postives = 65/119 (54.62%), Query Frame = 1 Query: 1 MEGVDLVEYFSLQAGEPAVAGRAEHVAMHAGYRFNFASAENMAMFQDQPSRYIPKWGGFCAWGISEEETWTRDNLGPPTNPDSWLVTADDELFLFRSDYNKDLFIEDIPGYTKAGNLRW 357 +EG D+V YF L + V G +E +++ G+ F F+S ENM F+ P +Y+P WGGFCA+G++EE WT + + PD+W + D LF F F +P + G+ W Sbjct: 17 LEGYDVVAYFGLDPLDDGVQGSSEFTSVYQGFEFYFSSKENMEKFESDPEKYVPAWGGFCAYGVAEETWWTAETMSAGVVPDAWRI-IDGRLFFFHDIGVAAWFAALLPDAIREGDATW 134
BLAST of mRNA_L-elsbetiae_contig594.14424.1 vs. uniprot
Match: A0A7S3JR48_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JR48_9STRA) HSP 1 Score: 97.1 bits (240), Expect = 7.320e-22 Identity = 48/120 (40.00%), Postives = 69/120 (57.50%), Query Frame = 1 Query: 1 MEGVDLVEYFSLQAGEPAVAGRAEHVAMHAGYRFNFASAENMAMFQDQPSRYIPKWGGFCAWGISEEETWTRDNLGPPTNPDSWLVTADDELFLFRSDYNKDLFIE-DIPGYTKAGNLRW 357 +EG D+V Y L G A G A++ A + Y F F +AEN A F P +Y+PK+GGFC++GI+ E WT+D LGP N + W++ DD LF+F + F+ +I + GN W Sbjct: 148 LEGADVVAYRYLNVGANATIGSADYAAKYGEYTFYFENAENRATFLSNPDKYVPKFGGFCSYGITNEFFWTKDTLGPNANKNVWII-YDDHLFVFMYCTPEHKFVSRNITEEIERGNQIW 266
BLAST of mRNA_L-elsbetiae_contig594.14424.1 vs. uniprot
Match: A0A7T1ME45_9SYNE (Uncharacterized protein n=2 Tax=unclassified Synechococcus TaxID=2626047 RepID=A0A7T1ME45_9SYNE) HSP 1 Score: 94.7 bits (234), Expect = 1.080e-21 Identity = 45/121 (37.19%), Postives = 72/121 (59.50%), Query Frame = 1 Query: 7 GVDLVEYFSLQAGEPAVAGRAEHVAMHAGYRFNFASAENMAMFQDQPSRYIPKWGGFCAWGISEEE----TWTRDNLGPPTNPDSWLVTADDELFLFRSDYNKDLFIEDIPGYTKAGNLRW 357 G D+V +F G P G+ + +H GY + F ++ENM F + PSR+IP+ GGFC+WGIS E W RD LGP + ++W++ +D L+LF +D ++ F +++ K G+ R+ Sbjct: 68 GADVVSFFGRADGTPPARGKPAYRHVHLGYTYYFHNSENMRRFAESPSRFIPRNGGFCSWGISNEFEPEFVWARDCLGPAVSLNAWII-RNDRLYLFLADKPEEKFEKNLSENEKKGDRRY 187
BLAST of mRNA_L-elsbetiae_contig594.14424.1 vs. uniprot
Match: A0A7S2W6K5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W6K5_9STRA) HSP 1 Score: 94.4 bits (233), Expect = 1.220e-21 Identity = 48/120 (40.00%), Postives = 74/120 (61.67%), Query Frame = 1 Query: 1 MEGVDLVEYFSLQAGEPAVAGRAEHVAMHAGYRFNFASAENMAMFQDQPSRYIPKWGGFCAWGISEEETWTRDNLGPPTNPDSWLVTADDELFLFRSD-YNKDLFIEDIPGYTKAGNLRW 357 + GVD+V YFSL E AV G + VA Y F F++ N A+F+ P +Y+P++GGFCA+GI++ +WT D+L P++PD+W + D +L+LF+S Y ++ D+ G RW Sbjct: 69 LSGVDVVGYFSLSTDEQAVQGSPDLVARVGKYDFFFSTQRNKALFEVNPRKYMPQFGGFCAYGITKN-SWTADSLDLPSDPDAWRI-IDGKLYLFKSSSYLEEFVAGDVETELLGGYKRW 186
BLAST of mRNA_L-elsbetiae_contig594.14424.1 vs. uniprot
Match: A0A7C4VAA0_9PROT (YHS domain-containing protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A7C4VAA0_9PROT) HSP 1 Score: 88.2 bits (217), Expect = 8.220e-20 Identity = 44/117 (37.61%), Postives = 69/117 (58.97%), Query Frame = 1 Query: 7 GVDLVEYFSLQAGEPAVAGRAEHVAMHAGYRFNFASAENMAMFQDQPSRYIPKWGGFCAWGISEEETWTRDNLGPPTNPDSWLVTADDELFLFRSDYNKDLFIEDIPGYTKAGNLRW 357 G D V YF+ G P V G +H H GY + FASAE++A F+ P+RY+P++GG+CAW +++ T P NP++W + D +L+L +D + + DIPG+ ++ N W Sbjct: 40 GYDPVAYFT--DGRP-VRGTTQHRITHQGYEYRFASAEHLAAFRANPARYLPQYGGYCAWAVAQGYT-------APGNPNNWRI-VDGKLYLNYNDEVQQRWERDIPGFIRSANANW 145 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig594.14424.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig594.14424.1 >prot_L-elsbetiae_contig594.14424.1 ID=prot_L-elsbetiae_contig594.14424.1|Name=mRNA_L-elsbetiae_contig594.14424.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=120bp MEGVDLVEYFSLQAGEPAVAGRAEHVAMHAGYRFNFASAENMAMFQDQPSback to top mRNA from alignment at L-elsbetiae_contig594:6260..10771- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig594.14424.1 ID=mRNA_L-elsbetiae_contig594.14424.1|Name=mRNA_L-elsbetiae_contig594.14424.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4512bp|location=Sequence derived from alignment at L-elsbetiae_contig594:6260..10771- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig594:6260..10771- >mRNA_L-elsbetiae_contig594.14424.1 ID=mRNA_L-elsbetiae_contig594.14424.1|Name=mRNA_L-elsbetiae_contig594.14424.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=720bp|location=Sequence derived from alignment at L-elsbetiae_contig594:6260..10771- (Laminarionema elsbetiae ELsaHSoW15)back to top |