mRNA_L-elsbetiae_contig5933.14414.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5933.14414.1 vs. uniprot
Match: D8LGI7_ECTSI (TIP120 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGI7_ECTSI) HSP 1 Score: 219 bits (557), Expect = 7.160e-64 Identity = 112/116 (96.55%), Postives = 115/116 (99.14%), Query Frame = 1 Query: 1 SQHERIMTVVLKQLPHERVVVRKRAATCLGSVAVVVSEALLNRLAVHLLQKISESPPADVVRTLIQTIGTISRTVGYRLGRHLDSIVPLFFQFCGNPEDESLHTEAADELRENCFQ 348 S+HERIMTVVLKQLPHERVVVRKRAATCLGSVAVVVSE+LLNRLAVHLLQKISESPP DVVRTLIQTIGTISRTVGYRLGRHLDSIVPLFFQFCG+PEDESLHTEAADELRENCFQ Sbjct: 64 SEHERIMTVVLKQLPHERVVVRKRAATCLGSVAVVVSESLLNRLAVHLLQKISESPPPDVVRTLIQTIGTISRTVGYRLGRHLDSIVPLFFQFCGDPEDESLHTEAADELRENCFQ 179
BLAST of mRNA_L-elsbetiae_contig5933.14414.1 vs. uniprot
Match: A0A835Z0R5_9STRA (Armadillo-type protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0R5_9STRA) HSP 1 Score: 154 bits (388), Expect = 8.290e-43 Identity = 77/115 (66.96%), Postives = 94/115 (81.74%), Query Frame = 1 Query: 4 QHERIMTVVLKQLPHERVVVRKRAATCLGSVAVVVSEALLNRLAVHLLQKISESPPADVVRTLIQTIGTISRTVGYRLGRHLDSIVPLFFQFCGNPEDESLHTEAADELRENCFQ 348 +H R++ +L QL ER VVRKRA CLGS+AVV+S+ALLN+L VHLL +I S AD+VRTLIQ IGTISRTVG+RLGRHLD+IVPLF +F G+ +DE +HTEAA ELR+NCFQ Sbjct: 164 EHNRVIEALLVQLGQERAVVRKRATACLGSIAVVLSDALLNKLVVHLLAQIKGSDRADIVRTLIQAIGTISRTVGFRLGRHLDAIVPLFLKFIGDMDDEDMHTEAASELRDNCFQ 278
BLAST of mRNA_L-elsbetiae_contig5933.14414.1 vs. uniprot
Match: A0A485LBH5_9STRA (Aste57867_18631 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LBH5_9STRA) HSP 1 Score: 138 bits (347), Expect = 1.660e-35 Identity = 68/116 (58.62%), Postives = 88/116 (75.86%), Query Frame = 1 Query: 1 SQHERIMTVVLKQLPHERVVVRKRAATCLGSVAVVVSEALLNRLAVHLLQKISESPPADVVRTLIQTIGTISRTVGYRLGRHLDSIVPLFFQFCGNPEDESLHTEAADELRENCFQ 348 +H IM ++LK+L +R VRKR +CLG++ VV S+ALL+RL HLL + ++ VRTLIQTIGT+SRTVG+RLGRHL +IVPLF FCG P+DESL +A++ELRENCFQ Sbjct: 165 GEHVAIMDLLLKELKDDRAFVRKRVTSCLGALGVVASDALLHRLMEHLLSSVKAEEDSNEVRTLIQTIGTLSRTVGHRLGRHLPTIVPLFLTFCGTPDDESLQNDASNELRENCFQ 280
BLAST of mRNA_L-elsbetiae_contig5933.14414.1 vs. uniprot
Match: A0A6G0WW89_9STRA (TIP120 domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WW89_9STRA) HSP 1 Score: 135 bits (340), Expect = 1.450e-34 Identity = 66/116 (56.90%), Postives = 88/116 (75.86%), Query Frame = 1 Query: 1 SQHERIMTVVLKQLPHERVVVRKRAATCLGSVAVVVSEALLNRLAVHLLQKISESPPADVVRTLIQTIGTISRTVGYRLGRHLDSIVPLFFQFCGNPEDESLHTEAADELRENCFQ 348 +H IM ++LK+L ER VRKR CLG++ VV S+ALL+RL HLL + + ++ VRTLIQTIGT+SR VG+RLGRHL +IVPLF +FCG+ +DES+ +A++ELRENCFQ Sbjct: 165 GEHVAIMDLLLKELKDERAFVRKRVTACLGALGVVASDALLHRLVEHLLSSVKQEGDSNEVRTLIQTIGTLSRAVGHRLGRHLPTIVPLFLKFCGSTDDESMQNDASNELRENCFQ 280
BLAST of mRNA_L-elsbetiae_contig5933.14414.1 vs. uniprot
Match: A0A024TMU3_9STRA (TIP120 domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TMU3_9STRA) HSP 1 Score: 135 bits (339), Expect = 1.980e-34 Identity = 67/118 (56.78%), Postives = 90/118 (76.27%), Query Frame = 1 Query: 1 SQHERIMTVVLKQLPHERVVVRKRAATCLGSVAVVVSEALLNRLAVHLLQKISESPPADV--VRTLIQTIGTISRTVGYRLGRHLDSIVPLFFQFCGNPEDESLHTEAADELRENCFQ 348 +H IM ++LK+L +R VRKR +CLG++ VV ++ALL+RL HLL + ++ +D VRTLIQTIGT+SRTVG+RLGRHL +IVPLF FCG+P+DES+ + A+ELRENCFQ Sbjct: 165 GEHVSIMDILLKELNDDRAFVRKRVTSCLGALGVVATDALLHRLVEHLLADVKQASSSDSSEVRTLIQTIGTLSRTVGHRLGRHLSTIVPLFLTFCGSPDDESMQNDTANELRENCFQ 282
BLAST of mRNA_L-elsbetiae_contig5933.14414.1 vs. uniprot
Match: A0A3R6ZTI8_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6ZTI8_9STRA) HSP 1 Score: 135 bits (339), Expect = 2.030e-34 Identity = 67/118 (56.78%), Postives = 90/118 (76.27%), Query Frame = 1 Query: 1 SQHERIMTVVLKQLPHERVVVRKRAATCLGSVAVVVSEALLNRLAVHLLQKISESPPADV--VRTLIQTIGTISRTVGYRLGRHLDSIVPLFFQFCGNPEDESLHTEAADELRENCFQ 348 +H IM ++LK+L +R VRKR +CLG++ VV ++ALL+RL HLL + ++ +D VRTLIQTIGT+SRTVG+RLGRHL +IVPLF FCG+P+DES+ + A+ELRENCFQ Sbjct: 169 GEHVSIMDILLKELNDDRAFVRKRVTSCLGALGVVATDALLHRLVEHLLADVKQASSSDSSEVRTLIQTIGTLSRTVGHRLGRHLSTIVPLFLTFCGSPDDESMQNDTANELRENCFQ 286
BLAST of mRNA_L-elsbetiae_contig5933.14414.1 vs. uniprot
Match: A0A067BEA3_SAPPC (Uncharacterized protein (Fragment) n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BEA3_SAPPC) HSP 1 Score: 134 bits (338), Expect = 2.410e-34 Identity = 68/116 (58.62%), Postives = 89/116 (76.72%), Query Frame = 1 Query: 1 SQHERIMTVVLKQLPHERVVVRKRAATCLGSVAVVVSEALLNRLAVHLLQKISESPPADVVRTLIQTIGTISRTVGYRLGRHLDSIVPLFFQFCGNPEDESLHTEAADELRENCFQ 348 S+H IM ++LK+L ER VRKR +CLG++ VV ++ALL+RL HLLQ + + AD RTLIQTIGT+SR+VG+RLGRHL IVPLF FCG+P+DES+ + ++ELRENCFQ Sbjct: 141 SEHVAIMDLLLKELSDERAFVRKRVTSCLGALGVVAADALLHRLVEHLLQSVENNHEADK-RTLIQTIGTLSRSVGHRLGRHLPVIVPLFLTFCGSPDDESMQNDVSNELRENCFQ 255
BLAST of mRNA_L-elsbetiae_contig5933.14414.1 vs. uniprot
Match: T0R139_SAPDV (TIP120 domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0R139_SAPDV) HSP 1 Score: 134 bits (338), Expect = 2.710e-34 Identity = 68/116 (58.62%), Postives = 89/116 (76.72%), Query Frame = 1 Query: 1 SQHERIMTVVLKQLPHERVVVRKRAATCLGSVAVVVSEALLNRLAVHLLQKISESPPADVVRTLIQTIGTISRTVGYRLGRHLDSIVPLFFQFCGNPEDESLHTEAADELRENCFQ 348 S+H IM ++LK+L ER VRKR +CLG++ VV ++ALL+RL HLLQ + + AD RTLIQTIGT+SR+VG+RLGRHL IVPLF FCG+P+DES+ + ++ELRENCFQ Sbjct: 164 SEHVAIMDLLLKELSDERAFVRKRVTSCLGALGVVAADALLHRLVEHLLQSVENNHEADK-RTLIQTIGTLSRSVGHRLGRHLPVIVPLFLTFCGSPDDESMQNDVSNELRENCFQ 278
BLAST of mRNA_L-elsbetiae_contig5933.14414.1 vs. uniprot
Match: A0A1V9ZD09_9STRA (Cullin-associated NEDD8-dissociated protein (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZD09_9STRA) HSP 1 Score: 132 bits (333), Expect = 1.320e-33 Identity = 69/116 (59.48%), Postives = 87/116 (75.00%), Query Frame = 1 Query: 1 SQHERIMTVVLKQLPHERVVVRKRAATCLGSVAVVVSEALLNRLAVHLLQKISESPPADVVRTLIQTIGTISRTVGYRLGRHLDSIVPLFFQFCGNPEDESLHTEAADELRENCFQ 348 S+H IM +LK+L ER VRKR TCLG++ VV S+ALL+RL HLL + + AD RTLIQTIGT+SR+VG+RLGRHL IVPLF QFCG+P +ES+ + ++ELRENCFQ Sbjct: 2164 SEHVAIMDQLLKELSDERAFVRKRVTTCLGALGVVASDALLHRLVEHLLHSVETNHEADK-RTLIQTIGTLSRSVGHRLGRHLPVIVPLFLQFCGSPSNESMQNDNSNELRENCFQ 2278
BLAST of mRNA_L-elsbetiae_contig5933.14414.1 vs. uniprot
Match: A0A1V9YGK7_9STRA (Cullin-associated NEDD8-dissociated protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YGK7_9STRA) HSP 1 Score: 131 bits (330), Expect = 3.250e-33 Identity = 66/116 (56.90%), Postives = 88/116 (75.86%), Query Frame = 1 Query: 1 SQHERIMTVVLKQLPHERVVVRKRAATCLGSVAVVVSEALLNRLAVHLLQKISESPPADVVRTLIQTIGTISRTVGYRLGRHLDSIVPLFFQFCGNPEDESLHTEAADELRENCFQ 348 ++H IM ++LK+L ER VRKR +CLG++ +V ++ALL+RL HLLQ + + AD RTLIQTIGT+SR+VG+RLGRHL IVPLF FCG+P DES+ + ++ELRENCFQ Sbjct: 181 TEHVAIMDLLLKELGDERAFVRKRVTSCLGALGIVAADALLHRLVEHLLQSVENNHNADK-RTLIQTIGTLSRSVGHRLGRHLPVIVPLFLTFCGDPSDESMQNDVSNELRENCFQ 295 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5933.14414.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5933.14414.1 >prot_L-elsbetiae_contig5933.14414.1 ID=prot_L-elsbetiae_contig5933.14414.1|Name=mRNA_L-elsbetiae_contig5933.14414.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=110bp MTVVLKQLPHERVVVRKRAATCLGSVAVVVSEALLNRLAVHLLQKISESPback to top mRNA from alignment at L-elsbetiae_contig5933:10429..11264+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5933.14414.1 ID=mRNA_L-elsbetiae_contig5933.14414.1|Name=mRNA_L-elsbetiae_contig5933.14414.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=836bp|location=Sequence derived from alignment at L-elsbetiae_contig5933:10429..11264+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5933:10429..11264+ >mRNA_L-elsbetiae_contig5933.14414.1 ID=mRNA_L-elsbetiae_contig5933.14414.1|Name=mRNA_L-elsbetiae_contig5933.14414.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=660bp|location=Sequence derived from alignment at L-elsbetiae_contig5933:10429..11264+ (Laminarionema elsbetiae ELsaHSoW15)back to top |