mRNA_L-elsbetiae_contig593.14408.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig593.14408.1
Unique NamemRNA_L-elsbetiae_contig593.14408.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig593.14408.1 vs. uniprot
Match: D7FP80_ECTSI (Flagellar associated protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP80_ECTSI)

HSP 1 Score: 390 bits (1001), Expect = 7.960e-133
Identity = 197/250 (78.80%), Postives = 216/250 (86.40%), Query Frame = 1 
Query:    1 MRALACSLLFASRAPIACSFRVQAGRSNPSTLASP----QRGYKVTDTVMAASGGNQLVMDAFAIRQFTDPNYTGTKVEYDPQEFEDKVNEIFRATGGDLVEGYAPFCKHVFVPNFAGVKTSAVEITPANEKLLVTGYEARTDKELPVLSRWFEAGTVETPEAKFLDIILYSREQIRKETAAMDKEGTASDAPWGIISVKSQDVDYEVPMQPITMMRNALGKEEGGSGVPLVREKYTESVKFWKKHAPVK 738
            +RA ACSLLFA+RA  AC+FR+QA  + P  L  P    +RGYK T T M+A GGN+LVMDAFA+RQFTD +YTGTKV YDPQEFEDKVNEIFRA GG L EGYAPFCKHVFVPNFAGVKTS V+ITP NEKLLV GYEART KELP+LSRWFE+GTVETPEAKFLDIILYSREQIRKETAAM KE   S+APWGIISVKSQDVD+E+PMQPITMMRNALGKEEGGSGVPL REKY +SV+FW+ HAPVK
Sbjct:    3 IRAAACSLLFAARASTACAFRIQAA-ARPCPLGFPAAASRRGYKSTTTAMSAPGGNELVMDAFAMRQFTDESYTGTKVAYDPQEFEDKVNEIFRAAGGKLEEGYAPFCKHVFVPNFAGVKTSTVKITPENEKLLVAGYEARTAKELPILSRWFESGTVETPEAKFLDIILYSREQIRKETAAMGKEKEDSEAPWGIISVKSQDVDHEIPMQPITMMRNALGKEEGGSGVPLEREKYMQSVEFWRDHAPVK 251
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BLAST of mRNA_L-elsbetiae_contig593.14408.1 vs. uniprot
Match: A0A7S1TVC6_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TVC6_9STRA)

HSP 1 Score: 273 bits (698), Expect = 6.690e-87
Identity = 137/208 (65.87%), Postives = 162/208 (77.88%), Query Frame = 1 
Query:  124 TDTVMAASGGNQLVMDAFAIRQFTD--PNYTGTKVEYDPQEFEDKVNEIFRATGGDLVEGYAPFCKHVFVPNFAGVKTSAVEITPANEKLLVTGYEARTDKELPVLSRWFEAGTV-ETPEAKFLDIILYSREQIRKETAAMDKEGTASDAPWGIISVKSQDVDYEVPMQPITMMRNALGKEEGGSGVPLVREKYTESVKFWKKHAPVK 738
            T T MA +  ++LV+D FA+RQF D  P YTGTKV +D  EFE K+NE + A G  LV+GYAPFCKH+FVPNFAGVK S + ITP NE LL + YEART++ELPVLSR+F    V E PE K+LDIILYSREQI KE A MD+    + APWGIISVK+QDVDYE+PMQPITMMRNALG+++GGSGV LVREKY ESV FW  +AP+K
Sbjct:   46 TSTRMAMASTHELVLDEFALRQFNDRDPGYTGTKVSFDEAEFEAKINEAYDAGGKALVDGYAPFCKHIFVPNFAGVKASTLPITPENEHLLRSSYEARTEQELPVLSRYFPLAAVGEPPECKYLDIILYSREQIAKEAADMDRAAPDTTAPWGIISVKAQDVDYELPMQPITMMRNALGRDQGGSGVELVREKYDESVAFWSGNAPIK 253
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BLAST of mRNA_L-elsbetiae_contig593.14408.1 vs. uniprot
Match: A0A7S3Y2J4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y2J4_HETAK)

HSP 1 Score: 256 bits (654), Expect = 1.800e-80
Identity = 126/203 (62.07%), Postives = 151/203 (74.38%), Query Frame = 1 
Query:  130 TVMAASGGNQLVMDAFAIRQFTDPNYTGTKVEYDPQEFEDKVNEIFRATGGDLVEGYAPFCKHVFVPNFAGVKTSAVEITPANEKLLVTGYEARTDKELPVLSRWFEAGTVETPEAKFLDIILYSREQIRKETAAMDKEGTASDAPWGIISVKSQDVDYEVPMQPITMMRNALGKEEGGSGVPLVREKYTESVKFWKKHAPVK 738
            T+  AS   ++V+D F +RQFTD  YTGTK+ YDP +FE K+N++F A    LV+GYAPFCKH+FVPNFAGV  S   IT  N  LL +GYEART+KELPVL RWF A  V   E +FLDIILYSREQIRKE  AM  E + SDAPWGI+SVK+QD++YE+PMQPITMMRNALG ++GGSGV L  + Y  SV FW  HA +K
Sbjct:   39 TLRMASSEREIVIDPFCMRQFTDDAYTGTKINYDPDDFEVKINDLFSAGQAPLVDGYAPFCKHLFVPNFAGVVGSIAAITEENIHLLKSGYEARTEKELPVLVRWFSAEDVPQSETEFLDIILYSREQIRKENEAMG-EDSGSDAPWGIVSVKAQDINYEIPMQPITMMRNALGADQGGSGVTLDADAYAASVAFWTDHATIK 240
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BLAST of mRNA_L-elsbetiae_contig593.14408.1 vs. uniprot
Match: A0A7S4FA99_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4FA99_CHRCT)

HSP 1 Score: 253 bits (647), Expect = 5.580e-80
Identity = 126/201 (62.69%), Postives = 151/201 (75.12%), Query Frame = 1 
Query:  136 MAASGGNQLVMDAFAIRQFTDPNYTGTKVEYDPQEFEDKVNEIFRATGGDLVEGYAPFCKHVFVPNFAGVKTSAVEITPANEKLLVTGYEARTDKELPVLSRWFEAGTVETPE-AKFLDIILYSREQIRKETAAMDKEGTASDAPWGIISVKSQDVDYEVPMQPITMMRNALGKEEGGSGVPLVREKYTESVKFWKKHAPV 735
            M+A+   +  +D F +RQF DP Y+GTKV +D  +F +++     A    LV+GYAPFCKH+FVPNF    T  + ITP NE LL T Y+ART++ELPVL+RWF A TV  P  AKFLDIILYSREQIRKE  AM +    ++ PWGIISVK+QDVDYE+PMQPITMMRNALGK EGGSGVPLVREKY ESV FWK+HAP+
Sbjct:    1 MSAASTRKFCLDPFCLRQFDDPKYSGTKVAHDKADFLERIIAAHDAGNAPLVDGYAPFCKHLFVPNFTPATTPYLPITPENEGLLRTAYDARTEQELPVLTRWFPAETVPAPPIAKFLDIILYSREQIRKEAEAMGRTDDQTE-PWGIISVKAQDVDYELPMQPITMMRNALGKSEGGSGVPLVREKYNESVNFWKQHAPI 200
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BLAST of mRNA_L-elsbetiae_contig593.14408.1 vs. uniprot
Match: A0A7S2UWN7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWN7_9STRA)

HSP 1 Score: 254 bits (649), Expect = 2.100e-79
Identity = 128/204 (62.75%), Postives = 150/204 (73.53%), Query Frame = 1 
Query:  124 TDTVMAASGGNQLVMDAFAIRQFTDPNYTGTKVEYDPQEFEDKVNEIFRATGGDLVEGYAPFCKHVFVPNFAGVKTSAVEITPANEKLLVTGYEARTDKELPVLSRWFEAGTVETPEAKFLDIILYSREQIRKETAAMDKEGTASDAPWGIISVKSQDVDYEVPMQPITMMRNALGKEEGGSGVPLVREKYTESVKFWKKHAPV 735
            T ++   S   + V+D F IRQF D NYTGT V YD Q+F+DKVNE +   G  LV+GYAPFCKH+FVPNFAGV+ S V IT  N  L+ + Y+ARTDKEL VL RW     VE  +A FLDIILYSREQI KE  AM +E   +DAPWGIISVK+QDVD+E+PMQPITMMRNALGKE GGSGV L R+KYTESV FW+ H  +
Sbjct:   59 TRSMSKDSSEPKFVLDKFCIRQFDDDNYTGTNVYYDKQQFQDKVNE-YHDNGTPLVDGYAPFCKHLFVPNFAGVERSIVAITEENRHLIQSEYQARTDKELLVLVRWIPKDKVEPSQASFLDIILYSREQINKENEAMGQEKPDTDAPWGIISVKAQDVDHEIPMQPITMMRNALGKEHGGSGVELSRDKYTESVNFWQSHVTI 261
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BLAST of mRNA_L-elsbetiae_contig593.14408.1 vs. uniprot
Match: A0A0L0GAW9_9EUKA (Uncharacterized protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0GAW9_9EUKA)

HSP 1 Score: 253 bits (645), Expect = 2.110e-79
Identity = 122/202 (60.40%), Postives = 148/202 (73.27%), Query Frame = 1 
Query:  133 VMAASGGNQLVMDAFAIRQFTDPNYTGTKVEYDPQEFEDKVNEIFRATGGDLVEGYAPFCKHVFVPNFAGVKTSAVEITPANEKLLVTGYEARTDKELPVLSRWFEAGTVETPEAKFLDIILYSREQIRKETAAMDKEGTASDAPWGIISVKSQDVDYEVPMQPITMMRNALGKEEGGSGVPLVREKYTESVKFWKKHAPVK 738
            ++ +S  +  VMD FA+RQF DPNYTGT++++DP EFE KVNE + +    L +GYAPFCKH+F+PNF GVK     IT  N  LL T YEAR++KELPVL R+F+   V  P+A  LDIILYS+EQI KE  AM   G    APWGIISVK Q  DYE+PMQPITM+RNALG++EGGSGV L REKY+ESV FWK+HA  K
Sbjct:   19 IIMSSSAHTFVMDDFAMRQFDDPNYTGTRIKFDPSEFEAKVNEFYTSGEATLKDGYAPFCKHLFIPNFCGVKCGYARITADNRSLLQTEYEARSEKELPVLVRFFKTEDVTAPDATHLDIILYSKEQIIKENEAMGNPGKIMSAPWGIISVKGQTKDYELPMQPITMLRNALGRDEGGSGVKLEREKYSESVNFWKEHASFK 220
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BLAST of mRNA_L-elsbetiae_contig593.14408.1 vs. uniprot
Match: A0A0M0KA33_9EUKA (Flagellar associated protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0KA33_9EUKA)

HSP 1 Score: 250 bits (639), Expect = 7.570e-79
Identity = 125/196 (63.78%), Postives = 152/196 (77.55%), Query Frame = 1 
Query:  160 LVMDAFAIRQFTDPN--YTGTKVEYDPQEFEDKVNEIFRATGGDLVEGYAPFCKHVFVPNFAGVKTSAVEITPANEKLLVTGYEARTDKELPVLSRWF-EAGTVETPEAKFLDIILYSREQIRKETAAMDKEGTASDAPWGIISVKSQDVDYEVPMQPITMMRNALGKEEGGSGVPLVREKYTESVKFWKKHAPVK 738
             V+D FA +QF D N  Y GT+VEYD Q FE K+NE++ +    LV+GYAPFCKH+FVPNFAGVK + + +TP NE  L +GYEART++EL VL+RWF + G  E   A+++DIILYSREQI KE AAM +E   + APWGIIS+K+QDV YE+PMQPITMMRNALGKEEGGSGVP+ R KY ESV FW KHAP+K
Sbjct:    2 FVIDPFAFKQF-DANIAYEGTRVEYDKQAFEAKINELYASGDYPLVDGYAPFCKHLFVPNFAGVKNNVLVVTPENEGRLRSGYEARTEQELAVLTRWFPKDGADEPTVARYMDIILYSREQINKEAAAMGREEEPTTAPWGIISIKAQDVGYELPMQPITMMRNALGKEEGGSGVPMERAKYLESVAFWSKHAPIK 196
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BLAST of mRNA_L-elsbetiae_contig593.14408.1 vs. uniprot
Match: K3X1V7_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X1V7_GLOUD)

HSP 1 Score: 247 bits (630), Expect = 3.140e-77
Identity = 121/212 (57.08%), Postives = 155/212 (73.11%), Query Frame = 1 
Query:  118 KVTDTVMAASGG---NQLVMDAFAIRQFTDPNYTGTKVEYDPQEFEDKVNEIFRATGGDLVEGYAPFCKHVFVPNFAGVKTSAVEITPANEKLLVTGYEARTDKELPVLSRWFEAGTVETPEAKFLDIILYSREQIRKETAAMDKEGTAS--DAPWGIISVKSQDVDYEVPMQPITMMRNALGKEEGGSGVPLVREKYTESVKFWKKHAPVK 738
            K  DT + A+     ++LV+D F +RQF DP Y GT+++YD  EFE K+NEI+ A   +LV+GYAPFCKH+F+ NF   + + V+ITP+N +LL + YEAR   ELPVL RWF + +V    AK+LD+ILYSREQIRKE  A          DAPWGIISVK+QDVDYE+PM P+T+MRNALGKEEGGSGVPL R++Y +SV++WK HA VK
Sbjct:    3 KAADTTVDAAEPRPPHELVLDRFCLRQFDDPQYLGTQIKYDKVEFEKKINEIYLARNKELVDGYAPFCKHLFIENFTDTRLNVVKITPSNSRLLQSDYEARAPNELPVLVRWFPSHSVTPLVAKYLDVILYSREQIRKENEATGNPNPEEQDDAPWGIISVKAQDVDYELPMNPVTVMRNALGKEEGGSGVPLNRDEYLKSVEYWKNHALVK 214
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BLAST of mRNA_L-elsbetiae_contig593.14408.1 vs. uniprot
Match: A0A7S0P3Z7_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0P3Z7_9EUKA)

HSP 1 Score: 247 bits (630), Expect = 5.880e-77
Identity = 119/194 (61.34%), Postives = 144/194 (74.23%), Query Frame = 1 
Query:  160 LVMDAFAIRQFTDPNYTGTKVEYDPQEFEDKVNEIFRATGGDLVEGYAPFCKHVFVPNFAGVKTSAVEITPANEKLLVTGYEARTDKELPVLSRWFEAGTVE-TPEAKFLDIILYSREQIRKETAAMDKEGTASDAPWGIISVKSQDVDYEVPMQPITMMRNALGKEEGGSGVPLVREKYTESVKFWKKHAPVK 738
              +DAF +RQF D  YTGT+V +D  +FE ++N    +    LV+GYAPFCKH+FVPNF       + ITP NE LL +GY+ART++ELPVL RWF A ++   P AK+LD+ILYSREQIRKE AAM +      + WGIISVK+QDVDYE+PMQPITMMRN LGKEEGGSGVPLVRE Y +SV FW KHAP+K
Sbjct:   40 FALDAFVLRQFDDAAYTGTRVAWDKADFESRINAAHESGASPLVDGYAPFCKHLFVPNFTPAIMPYLPITPDNEGLLRSGYDARTEQELPVLCRWFPAASMPLAPRAKYLDVILYSREQIRKEAAAMGRADDGETSAWGIISVKAQDVDYELPMQPITMMRNTLGKEEGGSGVPLVREAYAKSVDFWSKHAPLK 233
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BLAST of mRNA_L-elsbetiae_contig593.14408.1 vs. uniprot
Match: F2UD39_SALR5 (Flagellar associated protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UD39_SALR5)

HSP 1 Score: 246 bits (627), Expect = 1.120e-76
Identity = 124/214 (57.94%), Postives = 149/214 (69.63%), Query Frame = 1 
Query:   94 LASPQRGYKVTDTVMAASGGNQLVMDAFAIRQFTDPNYTGTKVEYDPQEFEDKVNEIFRATGGDLVEGYAPFCKHVFVPNFAGVKTSAVEITPANEKLLVTGYEARTDKELPVLSRWFEAGTVETPEAKFLDIILYSREQIRKETAAMDKEGTASDAPWGIISVKSQDVDYEVPMQPITMMRNALGKEEGGSGVPLVREKYTESVKFWKKHAPV 735
            LA+P+       T+   SG +   +D FA+RQF D +YTGT+++  P+EF  KVNE+  +   DL  GYAPFCKHVFVPNF G     + ITP  E L+VT Y+ART+KELPVL+RW  A   E   AK LD+ILYSREQ+ +E  AM  EG   D PWGIISVK+QD  YE PMQPITM+RNALGKEEGGSGVPL REKY ESV +W KH P+
Sbjct:    8 LATPRLLATAPRTLATMSGKDLFFLDDFALRQFNDDSYTGTRLKGSPEEFAKKVNELCTSEE-DLKPGYAPFCKHVFVPNFVGALCPVIAITPEVEPLIVTAYKARTEKELPVLTRWVPAEKYEAKPAKMLDVILYSREQVIEERKAMGIEGDVPDCPWGIISVKAQDESYETPMQPITMLRNALGKEEGGSGVPLDREKYLESVAYWSKHVPL 220
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig593.14408.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FP80_ECTSI7.960e-13378.80Flagellar associated protein n=2 Tax=Ectocarpus Ta... [more]
A0A7S1TVC6_9STRA6.690e-8765.87Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A7S3Y2J4_HETAK1.800e-8062.07Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S4FA99_CHRCT5.580e-8062.69Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A7S2UWN7_9STRA2.100e-7962.75Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A0L0GAW9_9EUKA2.110e-7960.40Uncharacterized protein n=1 Tax=Sphaeroforma arcti... [more]
A0A0M0KA33_9EUKA7.570e-7963.78Flagellar associated protein n=1 Tax=Chrysochromul... [more]
K3X1V7_GLOUD3.140e-7757.08Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A7S0P3Z7_9EUKA5.880e-7761.34Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]
F2UD39_SALR51.120e-7657.94Flagellar associated protein n=1 Tax=Salpingoeca r... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig593contigL-elsbetiae_contig593:8927..13600 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score392.5
Seed ortholog evalue1.5e-106
Seed eggNOG ortholog2880.D7FP80
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.Protein of unknown function (DUF3228)
EggNOG OGs29VSF@1,2RXMS@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionflagellar associated protein
Ec32 orthologEc-08_000490.1
Exons7
Model size1208
Cds size741
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig593.14408.1prot_L-elsbetiae_contig593.14408.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig593 8927..13133 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816641.5728338-CDS-L-elsbetiae_contig593:8926..90541622816641.5728338-CDS-L-elsbetiae_contig593:8926..9054Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig593 8927..9054 +
1691683706.0288844-CDS-L-elsbetiae_contig593:8926..90541691683706.0288844-CDS-L-elsbetiae_contig593:8926..9054Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig593 8927..9054 +
1622816641.5836728-CDS-L-elsbetiae_contig593:10166..102071622816641.5836728-CDS-L-elsbetiae_contig593:10166..10207Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig593 10167..10207 +
1691683706.041787-CDS-L-elsbetiae_contig593:10166..102071691683706.041787-CDS-L-elsbetiae_contig593:10166..10207Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig593 10167..10207 +
1622816641.5946558-CDS-L-elsbetiae_contig593:10626..107091622816641.5946558-CDS-L-elsbetiae_contig593:10626..10709Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig593 10627..10709 +
1691683706.055338-CDS-L-elsbetiae_contig593:10626..107091691683706.055338-CDS-L-elsbetiae_contig593:10626..10709Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig593 10627..10709 +
1622816641.6053329-CDS-L-elsbetiae_contig593:11305..113491622816641.6053329-CDS-L-elsbetiae_contig593:11305..11349Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig593 11306..11349 +
1691683706.0655122-CDS-L-elsbetiae_contig593:11305..113491691683706.0655122-CDS-L-elsbetiae_contig593:11305..11349Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig593 11306..11349 +
1622816641.6167758-CDS-L-elsbetiae_contig593:11833..119571622816641.6167758-CDS-L-elsbetiae_contig593:11833..11957Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig593 11834..11957 +
1691683706.0743942-CDS-L-elsbetiae_contig593:11833..119571691683706.0743942-CDS-L-elsbetiae_contig593:11833..11957Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig593 11834..11957 +
1622816641.62839-CDS-L-elsbetiae_contig593:12449..125321622816641.62839-CDS-L-elsbetiae_contig593:12449..12532Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig593 12450..12532 +
1691683706.0834382-CDS-L-elsbetiae_contig593:12449..125321691683706.0834382-CDS-L-elsbetiae_contig593:12449..12532Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig593 12450..12532 +
1622816641.6391683-CDS-L-elsbetiae_contig593:12895..131331622816641.6391683-CDS-L-elsbetiae_contig593:12895..13133Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig593 12896..13133 +
1691683706.0936432-CDS-L-elsbetiae_contig593:12895..131331691683706.0936432-CDS-L-elsbetiae_contig593:12895..13133Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig593 12896..13133 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816641.6496038-UTR-L-elsbetiae_contig593:13133..136001622816641.6496038-UTR-L-elsbetiae_contig593:13133..13600Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig593 13134..13600 +
1691683706.11089-UTR-L-elsbetiae_contig593:13133..136001691683706.11089-UTR-L-elsbetiae_contig593:13133..13600Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig593 13134..13600 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig593.14408.1

>prot_L-elsbetiae_contig593.14408.1 ID=prot_L-elsbetiae_contig593.14408.1|Name=mRNA_L-elsbetiae_contig593.14408.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=247bp
MRALACSLLFASRAPIACSFRVQAGRSNPSTLASPQRGYKVTDTVMAASG
GNQLVMDAFAIRQFTDPNYTGTKVEYDPQEFEDKVNEIFRATGGDLVEGY
APFCKHVFVPNFAGVKTSAVEITPANEKLLVTGYEARTDKELPVLSRWFE
AGTVETPEAKFLDIILYSREQIRKETAAMDKEGTASDAPWGIISVKSQDV
DYEVPMQPITMMRNALGKEEGGSGVPLVREKYTESVKFWKKHAPVK*
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mRNA from alignment at L-elsbetiae_contig593:8927..13600+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig593.14408.1 ID=mRNA_L-elsbetiae_contig593.14408.1|Name=mRNA_L-elsbetiae_contig593.14408.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4674bp|location=Sequence derived from alignment at L-elsbetiae_contig593:8927..13600+ (Laminarionema elsbetiae ELsaHSoW15)
ATGCGAGCGCTAGCTTGCTCTCTCTTGTTCGCTTCCCGAGCGCCGATTGC
TTGTTCGTTTCGAGTCCAGGCAGGGCGTTCAAATCCTTCTACGCTAGCGT
CACCCCAAAGAGGATATAAGGTGACAGAGTAGTTCGATCGATGCAGTCCT
GGGTAGTACATTTACATTTAGACTACCGGTATGGGCGAGTACGGGAGACA
CATGTTCCGACTGAAGACTGGAGCTTATTGAGTGAAAAAGGAGCACCTGT
GTCCGTGCTTCTATTTAACTATCTCGTGCACAGAAAGATAATTCGATGAG
ATGGTATGCAAGGCGTTGACTCCGGATGTCTGCACGTTCTGATCACATTT
CGCCGCCGTTGGGTAGGACGTTTTTTACGTAGTCTGCCGTAGATAACACA
GGATATCACCCCCCCTGGACAGATTCTCAACGCTCGATTACTCCACAACG
AAGAGGCTGCCAGAACCATACGCACATTTTCGGACAGCCTTCGACGAGAT
ATTTCCAACACCACTCCCTTTCGGCACTGGCGCTGTTCTTGCCCGGGGGA
GGAATCCAGCTTTGAAAATCTGTCCAGGGGGTGGTATCTTGTGTCACCTA
CGGTATCTAGACTTGAAACATAATCAAGTGCTACTTTGTAACTATCTATC
TAGTCTACATATCTCGACGTTATGGACTGCTCCAGCTGAGTACCTACATA
TGTGCACCTAGCGGCGGTGCATTTATCGGGAACGGTACCAATAATACACA
TGTGTTGCAGCAGCATTCGGAAGGAACTCAACCCTGCTGCTGTGGCACGT
GTGCCTTCAGAATGATAAACCTACAGCCAATGATGTAGAGACAACATCCC
ATGCTGTGGGGGCGGTTAGGGTCTTATCTACGTCATGTGTTACAGGGTGT
TGCATCATACGAGTGGATCGACGTGTGTAGCGTGTACCACGGCCCCGCGT
TGCATATTACTGCTGTAACCTGGTACGTATGCACCACCCCCTCTATATAG
TGACCGAGTATTTATCAGTTTTCAAGTTCCAACACGCCTGGAAACTACCT
ATACAGTGTGAGTGTGTGTATTGTACGGCACCGCGGTGGTAGTTCCAAAG
CCGTCAAACGCCAAAGATATCTATCATATGTATCTTCGCGGAGGGCTTTC
GGCTGTGATCGGCCTACATAAATACGGTAACCGGCCGCTCTCCCTGCCGT
TGCCGTTCACCTGTTGGGCCTGCCTTGCAAAGCAGCGGAGCACCGTCATG
GCGGCTTCAGGCGGAAACCAGCTCGTAATGGGTGAGAGAGAGAGGCCACT
GCTGTGGGCACAAACTTGGCGCTTTGCTCGCTCGCGTCGCCGAAATAAAT
CGGTCTTGCTATGCCGCGCTGCCTCTCTACATGTGTGTACGTTATATTGA
AGTCTTGTACGGAACACTGCTGCAGCTGTATATACGTAGGTCTGTGCCAC
AGACTATAATAGGGTTGACACGATGTGGACACGGAGTTTCTGAGCCCGGT
GTAGTTGCCTCTATCTAAGCCTGAGCTTTTCTCTTCTGCGCAGATGATGT
TCCTTGCAAACGAGACGCATGTGCTGAGGCGAGAAACAAACGATTGCGAC
TCCCCCCTCCTCCCCCTCCCTTTTCCCTCTTTCTCGTTTGATGTCCCCCC
TCTTCCCTCTTTCTGTTTGGTCCATCTTACTGACCATACTTACCTACCAG
ATGCGTTCGCAATACGGCAGTTTACGGACCCAAACTACACCGGGACCAAG
GTTGAGTACGACCCCCAGGAGTTCGAAGACAAGGTGCGGCAAAACAGCAT
TTCAGCGGTGTGTACCAGTTCATAGGCTGGGACAGCGGTGTTGCCTCTTG
CGCGTGATCCTTGTCGCCGATGTCTGTTTTCATCCTCTCGTCTTGATAAA
GGTAGACATGACGTTTGATGTTGCGCGTGTCATTTTCGGCGAAATCATAC
TGTATGCATGTCAGATGCGCTACAGATAAATAGCCCAAAATTATCCTGGG
CGGGGCGGAGCTGTAGTAACTTCTGGTGGTGAAGATTATTGATTTTGTGT
CGGCGAGACGCAAGACACCTCGGGGGTCCAGTTAAGTACCGCCGGGCGCT
TATGTACCATATTTTTTTGTTTTATTTTTCTTCCGCGGCATCAAGTGCAC
CCCCTTAAGTGTCTTGTGACCACGGGGGCCCCAAGGATGTTTTTTGGACT
ATCTAGAGAGCTAATGTGAGAAACAACAACAACATGTGTGCTTCGTTCTC
TCTCTCCCTCTATCTGTTCCATATTGGCGTGGTCATTGCTCATTTCGTCC
CCAACTCTCTGCCCCTGGCCACCTTGTCTTGCGCGTGAAATAAAAATGTC
GATCTTACACCCGTTCTTCGGGGGCCCAGGTGAACGAGATATTCCGAGCC
ACCGGGGGGGACCTGGTGGAGGGGTGAGCTTTCACACTGCCGCCAATGAT
TTGTTTGGTAAAAATGTAGTCCCACCCTTCAACGTGCTGTGCACATTGCG
TGCGGCACCCTGGGCTTTGACTGCCCTAGCGTCGTGGTACACACAACCTG
CCCTGTGCCAAGTGTTTTGAGCCGAAGGGCAAGCGTCTGGCAAAGCAGGT
CAAACCACGTGTGATGCACGTATTTACATGCCGTACGTGACACAAGAAAA
CACCCCCCCAGGACCGAGTTTCAAAGCTCGGTAACTCTGAACGGCACGTT
TTCGGACAGCTCTTGATGAGGTCTTTCCAACGCCGCCCTTTTCCGGGACT
GGCGTTCTTCTCGCTGTGGAGTATATTGCTCTTGAGCTTTGAAAATCGGT
CCAGGGGGTGTGTTATCTTGTGTCGTATACGGTACGCCAGGCAGGCTCCC
CTTCCACCATCCAACGACAGCACTAACTAACCACCCTCTGTCTCTCCCCC
CTTTCAGATACGCACCATTCTGCAAGCATGTATTCGTGCCTAACTTTGCC
GGCGTGAAGACGAGCGCCGTGGAGATAACACCAGCGAACGAAAAACTCTT
GGTTACTGGCTATGAGGCACGCACCGACAAGGTAATGCGAAGCATACATG
CACGCAACACGCAAGCGCTAGATTAGCGTGAACAGCATTATTGTTTTCTT
CCACATAGTTTTCGGTCGTAGATGCAGCACAATTCAAATAATCGCGTCGT
TTTCCACGATAATCCCCTCAATGTTGCGCACTGGTTCGATTCTCTGAGGA
CTCTGTCATCGTTCGGTGGCGAATCTGAAAACAGCGGAACCGCCTCATGA
AGCAATGAACCCACGCACTTCCCGCCGTTCAGCAGTAGCATCACGGTGCC
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCGCCTTCCCCCCCCC
CCCCCCCCCCCCCCCCCCCCTCCCGGTGAGCGCCTCTTGCGCGCCCGCGC
NNNNNNNNNNCGTCCCCCATCGTCGACTCGTCGCCCCCCCACGACTCAGC
CCAAGAATCCCCTGCCTCGGAATTTTCACCCCCCCCGGCCGTGCAATGCT
ATTTATGACCTTCCCACCCACAGGAATTGCCGGTTTTATCGCGATGGTTT
GAAGCCGGCACGGTTGAGACCCCTGAGGCAAAATTCTTAGACATCATTCT
TTACAGGTTAGTTATTGTGCAGGTGTCGGTTACTTATCCCCGACGGGTGC
ATTTGTGGCGTCCGCTTGCAATAGACTGTGGTCGCTTGACAAGCGCTTGC
GCTCCCTCGTTCTGCACTTTTCGAAAACCTATGTGGTCTTCCACTCGTGT
TGCTCCACTCCCAAAACTCCCGTGCAGTGATACATACATACATACATACA
AACATGCCTCCGTCGACCATACTGCCTTTGGAATGCCTTCGTTCCCTTGC
GCGTTCACAGCAGTGCTATTCTATACCAATAGTGTTGTTGACTTGGAAGC
ACGCGTCCCTGATCTGGTTGTTTTCTAATTGCTGCTGGCTGGGCCCCGAA
TCTTTTTTCTCGGCTCCAGCCGAGAACAGATCCGCAAGGAAACGGCCGCA
ATGGACAAGGAGGGGACGGCGTCGGATGCCCCCTGGGGAATCATCTCGGT
CAAGTCGCAGGACGTAGACTACGAGGTTCCGATGCAGCCCATCACCATGA
TGCGTAACGCGCTCGGGAAGGAAGAGGGGGGGTCGGGGGTCCCCCTGGTG
CGAGAGAAATACACGGAGAGCGTTAAATTTTGGAAGAAACACGCTCCCGT
CAAGTAGACTCTTGTGCACACAGCGAGAAAGCTCCGTGTGACTGTTTTCG
TTGTGGGTGGGCCCTGTGTGCGAGGCAGTTTTTTTTGCCGCTTTGATATG
CAGTAGTCTCCATACGCTGGGTTTTCATCTTTTCATCTTCAGCTAGCATA
TGAGATAAAAGTATAGAAACTGCGAAAGGGGGGTCGGTGGTTGGGGTTAG
GGTTAGGGTTATTTTCCGAGATGAGCTTAATTTTCGGCGTATGTAGGCGG
TCCCTTTGATGACGCGTCCGGTACAGGTCTGGCTGGTGTGTGGGCAGTGT
GTGTTCTCCAGATAAAAGCTCTAGCCTTCCCCCCCGGCCCCCCCTGATTT
GGCGCTCTCGTTAGCATTTTGGGTGGTGGTACGCAGCGCCCGCTTGTGCG
CGTTGTGGTCGCTCGCTTGCCGTGGCGTAACAGTAGTACAGCGGCATCTG
CCTGCCGCAGAGAGAGACAGGGTG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig593:8927..13600+

>mRNA_L-elsbetiae_contig593.14408.1 ID=mRNA_L-elsbetiae_contig593.14408.1|Name=mRNA_L-elsbetiae_contig593.14408.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1482bp|location=Sequence derived from alignment at L-elsbetiae_contig593:8927..13600+ (Laminarionema elsbetiae ELsaHSoW15)
ATGCGAGCGCTAGCTTGCTCTCTCTTGTTCGCTTCCCGAGCGCCGATTGC
TTGTTCGTTTCGAGTCCAGGCAGGGCGTTCAAATCCTTCTACGCTAGCGT
CACCCCAAAGAGGATATAAGGTGACAGAATGCGAGCGCTAGCTTGCTCTC
TCTTGTTCGCTTCCCGAGCGCCGATTGCTTGTTCGTTTCGAGTCCAGGCA
GGGCGTTCAAATCCTTCTACGCTAGCGTCACCCCAAAGAGGATATAAGGT
GACAGACACCGTCATGGCGGCTTCAGGCGGAAACCAGCTCGTAATGGCAC
CGTCATGGCGGCTTCAGGCGGAAACCAGCTCGTAATGGATGCGTTCGCAA
TACGGCAGTTTACGGACCCAAACTACACCGGGACCAAGGTTGAGTACGAC
CCCCAGGAGTTCGAAGACAAGATGCGTTCGCAATACGGCAGTTTACGGAC
CCAAACTACACCGGGACCAAGGTTGAGTACGACCCCCAGGAGTTCGAAGA
CAAGGTGAACGAGATATTCCGAGCCACCGGGGGGGACCTGGTGGAGGGGT
GAACGAGATATTCCGAGCCACCGGGGGGGACCTGGTGGAGGGATACGCAC
CATTCTGCAAGCATGTATTCGTGCCTAACTTTGCCGGCGTGAAGACGAGC
GCCGTGGAGATAACACCAGCGAACGAAAAACTCTTGGTTACTGGCTATGA
GGCACGCACCGACAAGATACGCACCATTCTGCAAGCATGTATTCGTGCCT
AACTTTGCCGGCGTGAAGACGAGCGCCGTGGAGATAACACCAGCGAACGA
AAAACTCTTGGTTACTGGCTATGAGGCACGCACCGACAAGGAATTGCCGG
TTTTATCGCGATGGTTTGAAGCCGGCACGGTTGAGACCCCTGAGGCAAAA
TTCTTAGACATCATTCTTTACAGGAATTGCCGGTTTTATCGCGATGGTTT
GAAGCCGGCACGGTTGAGACCCCTGAGGCAAAATTCTTAGACATCATTCT
TTACAGCCGAGAACAGATCCGCAAGGAAACGGCCGCAATGGACAAGGAGG
GGACGGCGTCGGATGCCCCCTGGGGAATCATCTCGGTCAAGTCGCAGGAC
GTAGACTACGAGGTTCCGATGCAGCCCATCACCATGATGCGTAACGCGCT
CGGGAAGGAAGAGGGGGGGTCGGGGGTCCCCCTGGTGCGAGAGAAATACA
CGGAGAGCGTTAAATTTTGGAAGAAACACGCTCCCGTCAAGTAGCCGAGA
ACAGATCCGCAAGGAAACGGCCGCAATGGACAAGGAGGGGACGGCGTCGG
ATGCCCCCTGGGGAATCATCTCGGTCAAGTCGCAGGACGTAGACTACGAG
GTTCCGATGCAGCCCATCACCATGATGCGTAACGCGCTCGGGAAGGAAGA
GGGGGGGTCGGGGGTCCCCCTGGTGCGAGAGAAATACACGGAGAGCGTTA
AATTTTGGAAGAAACACGCTCCCGTCAAGTAG
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