mRNA_L-elsbetiae_contig5926.14401.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig5926.14401.1
Unique NamemRNA_L-elsbetiae_contig5926.14401.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig5926.14401.1 vs. uniprot
Match: D8LSM1_ECTSI (ABC transporter domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSM1_ECTSI)

HSP 1 Score: 521 bits (1343), Expect = 9.660e-166
Identity = 371/713 (52.03%), Postives = 442/713 (61.99%), Query Frame = 1
Query:    1 RPDLGMLPARGQNPAEFILLAAKAAMTAAXXXXXXXXXXXXXXEGARSSPGLSLSYSCSSFASSSCSLSSRVIGPLIGVDPSSLQALGDGGDGSVVG----DSLFGDAEQGLHLYEDPLQPQQXXXXXXXXXXXXXXXPWRQRRRRWEGAPRAVDGDSTKQELLRRRAWGAGGGRESATYAVGFWAQFSAVWWRQWTVQTRREEALWAMLVKNVLVGVLTATVFWKEGAMDRGDALIDPVVNDVTPNASNLLGILYFGTLYGLTGHLQAIPEIFEWKRHLERERAAGMYSTTVYWLVSSTVNLPIILAGFVVYLNVCYWPLGLPAEFDKYAVFACINFMAALIGYSLAQALSAAMDTPQGAFAMWPLVFVAAANFAGFTIRLPVVRVWFTWLSELSFCRWIYQLMVVNQFGDFDEGSELLDLYFGGNRPPLPLNALYVGLFYAAALLLALYFLQPRGSRLKVLKENPTLLTRERLSVAALGGRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGEDSLLVETFDADGNDGDGPLYYLDEGSKVKKKXXXXXXXPQARKAMCEKFYSLYSLSRSPLRAPLLGGARGGFDKGGDIESVREAEVQQGSRVAFSNLHYYVYLREGEGGSKRSXXXXXXXXXXXXXXXXXXXDQP------------AAPANR--------------KEESHVLRGVTGVVSPGQIMAIMG 2049
            RP+LG++P  GQN AEFILLAAKA + ++               GARS      SY+ SS  SS+ +        LIGVDPSSL  +GDG           D  + DAE+GL       +P                          EGA    +  +T  ELL+RR WG GG  E +++AVGFWAQ SAVW R WTVQ RR++ L A+L KN  +GVL ATVF+++GA+++   L+DP++ DVTP ASN+LGILYFG LYGLTGHLQAIPEIFEWKRH ERERA GMYSTTVYWLVSSTV+LPIIL GF+VYLNVCYW LGLP E+ K+ +F+ I  M+ L+GYSLAQ LSAAM TPQ AFA WPLVFV AANF+GFT+RLP VRVWF+WL   SFCRWIYQLM VNQF DFDEG +LLDLYFG  RP L +NA+YVGL Y+ +LLLAL+FL PR SRLK L+E P     +  +        XXXXXXXXXXXXXXXXXXXXXXX            G  DS L+E +          LYYL+     K           A  ++    ++      S LR PLLGG  GGF    ++  V EA V +GSRVAFSNL+Y+VYLR+ +GG+   XXXXXXXXXXXXXXXXXXX                A A R              K E  +LRGV GVV+PGQ+MAIMG
Sbjct:   21 RPELGIMPTPGQNSAEFILLAAKAVLQSSQQHQEGRASR----RGARSPEP---SYASSSIHSSASTSPQG----LIGVDPSSLLGVGDGXXXXXXXXXXXDYFYEDAEKGLFNEPPGGKPAAYGGKGGYAEE--------------EGAEXGKEEGTTTLELLQRRPWGIGGWFEESSHAVGFWAQVSAVWGRGWTVQARRKDTLKALLFKNAFIGVLAATVFFQKGAVEKDAPLVDPLIQDVTPAASNVLGILYFGCLYGLTGHLQAIPEIFEWKRHFERERAGGMYSTTVYWLVSSTVHLPIILVGFLVYLNVCYWALGLPHEYAKFFIFSGIGLMSTLMGYSLAQTLSAAMSTPQNAFATWPLVFVTAANFSGFTVRLPAVRVWFSWLCNFSFCRWIYQLMAVNQFHDFDEGPKLLDLYFGTGRPTLLVNAVYVGLVYSTSLLLALFFLHPRRSRLKFLEEAPL---EDAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEEVKETEAARKGSVDSSLLEAY-GXXXXXXXXLYYLEXXXGKKPTQTFAAMTSGAGGSLQSYDHN----DPSSLRVPLLGGFHGGFHSLENMGGVYEAGVCEGSRVAFSNLNYHVYLRDEDGGTGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNAAAGADAGRGDVVKPAVVRRDESKREQQILRGVCGVVAPGQMMAIMG 700          
BLAST of mRNA_L-elsbetiae_contig5926.14401.1 vs. uniprot
Match: A0A6H5KKK8_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKK8_9PHAE)

HSP 1 Score: 510 bits (1313), Expect = 1.250e-158
Identity = 372/718 (51.81%), Postives = 446/718 (62.12%), Query Frame = 1
Query:    1 RPDLGMLPARGQNPAEFILLAAKAAMTAAXXXXXXXXXXXXXXEGARSSPGLSLSYSCSSFASSSCSLSSRVIGPLIGVDPSSLQALGDGGD------GSVVGDSLFGDAEQGLHLYEDPLQPQQXXXXXXXXXXXXXXXPWRQRRRRWEGAPRAVDGDSTKQELLRRRAWGAGGGRESATYAVGFWAQFSAVWWRQWTVQTRREEALWAMLVKNVLVGVLTATVFWKEGAMDRGDALIDPVVNDVTPNASNLLGILYFGTLYGLTGHLQAIPEIFEWKRHLERERAAGMYSTTVYWLVSSTVNLPIILAGFVVYLNVCYWPLGLPAEFDKYAVFACINFMAALIGYSLAQALSAAMDTPQG----AFAMWPLVFVAAANFAGFTIRLPVVRVWFTWLSELSFCRWIYQLMVVNQFGDFDEGSELLDLYFGGNRPPLPLNALYVGLFYAAALLLALYFLQPRGSRLKVLKENPTLLTRERLSVAALGGRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGEDSLLVETFDADGNDGDGPLYYLDEGSKVKKKXXXXXXXPQARKAMCEKFY--SLYSLSRSP---LRAPLLGGARGGFDKGGDIESVREAEVQQGSRVAFSNLHYYVYLREGEGGSKRSXXXXXXXXXXXXXXXXXXXD------------------QPAAPAN--RKEESHVLRGVTGVVSPGQIMAIMG 2049
            RP+LG++P  GQN AEFILLAAKA + ++              EG R+S   + S   S  +SS  S +S     LIGVDPSSL  +GDG         ++ GD L+ DAE+GL       +P                          EGA    +  +T  ELL+R+ WG GG  E +++AVGFWAQ SAVW R WTVQ RR++ L A+L KN  +GVL ATVF+++GA+++   L+DP++ DVTP ASN+LGILYFG LYGLTGHLQAIPEIFEWKRH ERERA GMYSTTVYWLVSSTV+LPIIL GF+VYLNVCYW LGLP E+ K+ +F+ I  M+ L+GYSLAQ LSAAM TPQ     AFA WPLVFV AANF+GFT+RLP VRVWF+WL   SFCRWIYQLM VNQF DFDEG +LLDLYFG  RP L +NA+YVGL Y+ +LLLAL+FL PR SRLK L+E P     +  +        XXXXXXXXXXXXXXXXXXXXX              G  DS L+E +                       XXXXXX  Q+  AM       SL S   +    LR PLLGG  GGF    ++  V EA V +GSRVAFSNL+Y+VYLR+ +G +  + XXXXXXXXXXXXXXXXXX                   +PA       K E  +LRGV GVV+PGQ+MAIMG
Sbjct:  424 RPELGIMPTPGQNSAEFILLAAKAVLQSSQQ------------EGGRASRRGARSPEPSYASSSIHSSASTSPQGLIGVDPSSLLGVGDGXXXXXXXXSTMGGDYLYEDAEKGLFNEPPGGKPAAYGGKGGYAEE--------------EGAEEGKEEGTTTLELLQRQPWGIGGWFEESSHAVGFWAQVSAVWGRGWTVQARRKDTLKALLFKNAFIGVLAATVFFQKGAVEKDAPLVDPLIQDVTPAASNVLGILYFGCLYGLTGHLQAIPEIFEWKRHFERERAGGMYSTTVYWLVSSTVHLPIILVGFLVYLNVCYWALGLPHEYAKFFIFSGIGLMSTLMGYSLAQTLSAAMSTPQARTANAFATWPLVFVTAANFSGFTVRLPAVRVWFSWLCNFSFCRWIYQLMAVNQFHDFDEGPKLLDLYFGTGRPTLLVNAVYVGLVYSTSLLLALFFLHPRRSRLKFLEEAPL---EDAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWSNEEVKETEAVRKGSVDSSLLEAYG---------XXXXXXXXXXXXXXXXXXXPTQSFAAMTTSGAGGSLQSYDHNDAASLRVPLLGGFNGGFHSLENMGGVYEAGVCEGSRVAFSNLNYHVYLRDEDGTTGATTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGRGDVVKPAVVRRDESKREQQILRGVCGVVAPGQMMAIMG 1103          
BLAST of mRNA_L-elsbetiae_contig5926.14401.1 vs. uniprot
Match: W7TH06_9STRA (Atp-binding cassette superfamily n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TH06_9STRA)

HSP 1 Score: 125 bits (313), Expect = 7.040e-26
Identity = 76/230 (33.04%), Postives = 127/230 (55.22%), Query Frame = 1
Query:  568 RQWTVQTRREEALWAMLVKNVLVGVLTATVFWKEGAMDRGDALIDPVVNDVTPNASNLLGILYFGTLYGLTGHLQAIPEIFEWKRHLERERAAGMYSTTVYWLVSSTVNLPIILAGFVVYLNVCYWPLGLPAEFDKYAVFACINFMAALIGYSLAQALSAAMDTPQGAFAMWPLVFVAAANFAGFTIRLPVVRVWFTWLSELSFCRWIYQLMVVNQFGDFDEGSELLDLY 1257
            R W  Q+R+ E + A L KNV+V  +   +F+ +G   R  +L     ++V+ N S+L    YF  LY +   LQ IP++F +     RER+A +YST  YW  ++ V +P++L   V+++ + YW +GL      +     + F+  LI +  AQ ++A   + + A AM+PLVF+   +FAGFTI L  +   + W S +S+ RW YQ +++N+F    + + +L  Y
Sbjct:  334 RFWIAQSRQWEFVVAQLGKNVVVASICGAIFFGQG---REKSL--STFSNVSFNVSSLW---YFAMLYTVLSCLQIIPQLFFFGVLYNRERSANVYSTFAYWAANAIVCVPLLLLSHVIFVEISYWMVGLYPNAACHLFALLVTFLNNLISFYCAQCIAAISPSAEVALAMFPLVFLFLGSFAGFTIPLGELPPGWKWASYISYPRWTYQALIINEFQYRADRTAVLTFY 555          
BLAST of mRNA_L-elsbetiae_contig5926.14401.1 vs. uniprot
Match: A0A7S2B2D3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B2D3_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 4.190e-16
Identity = 56/224 (25.00%), Postives = 105/224 (46.88%), Query Frame = 1
Query:  595 EEALWAMLVKNVLVGVLTATVFWKEGAMDRGDALIDPVVNDVTPNASNLLGILYFGTLYGLTGHLQAIPEIFEWKRHLERERAAGMYSTTVYWLVSSTVNLPIILAGFVVYLNVCYWPLGLPAEFDKYAVFACINFMAALIGYSLAQALSAAMDTPQGAFAMWPLVFVAAANFAGFTIRLPVVRVWFTWLSELSFCRWIYQLMVVNQFGDFDEGSELLDLYFGG 1266
            +++L+A  ++N+ VGV    V++++                   +   L  + YF   +    +LQAIP++FE +    RER AG YS   Y +    VN  + L     Y  +CY+ +GL   +  +  F  I F  ++ GY+ +  ++A     Q A  ++   F     F G++I +  V  ++ W +E+SF R+ ++ +++NQF   D    +  + + G
Sbjct:    3 KKSLYAGFMRNLFVGVWYGCVYYQQ------------------TDYHTLASVCYFSQQFICMSNLQAIPQMFEERTLFYRERGAGFYSEASYLMARVLVNATVQLWFVFAYSALCYFLVGLRGTWKDFLYFYAIMFGLSIAGYAFSNMIAALTPNQQSAMNLYSAGFQFCMFFCGYSIPVDEVPDYWRWATEVSFARYSFESLILNQFSGDDSTDAVYYMKYWG 208          
BLAST of mRNA_L-elsbetiae_contig5926.14401.1 vs. uniprot
Match: UPI00109B9068 (protein white isoform X2 n=3 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI00109B9068)

HSP 1 Score: 89.0 bits (219), Expect = 1.160e-14
Identity = 61/235 (25.96%), Postives = 111/235 (47.23%), Query Frame = 1
Query:  526 YAVGFWAQFSAVWWRQWTVQTRREEALWAMLVKNVLVGVLTATVFWKEGAMDRGDALIDPVVNDVTPNASNLLGILYFGTLYGLTGHLQAIPEIFEWKRHLE-RERAAGMYSTTVYWLVSSTVNLPIILAGFVVYLNVCYWPLGLPAEFDKYAVFACINFMAALIGYSLAQALSAAMDTPQGAFAMWPLVFVAAANFAGFTIRLPVVRVWFTWLSELSFCRWIYQLMVVNQFGDF 1227
            Y   +  QF AV WR W + T+R++ ++ + V   +V  L A + + +  +D             T    NL G ++F         LQ +  +F  +  +  R+   GMY T VY+L  +    PI +   ++ +++ YW +GL  EF  +    CI  +   +  S    +SA + T +GA ++ P +      F GF ++   V  +F W+  +S+ R+ ++LM+VNQ+  +
Sbjct:  392 YKASWCTQFRAVLWRSW-ISTQRDKLMFRIRVIQSVVTALIAGLIYLQTPID-------------TSGVQNLSGAIFFLVTSVSFSSLQGVIFVFPAELPVFLRDHKNGMYRTDVYFLSKTFAEFPIFILFPLILISIAYWMIGLRPEFLPFVYAFCILTLITNVXLSFGYIISALVPTVEGAASIGPPLXXPLMLFGGFFLKDSTVPDYFLWIKYISWFRYGFELMIVNQWDGY 612          
BLAST of mRNA_L-elsbetiae_contig5926.14401.1 vs. uniprot
Match: C1DYU8_MICCC (ATP-binding cassette superfamily n=2 Tax=Micromonas TaxID=38832 RepID=C1DYU8_MICCC)

HSP 1 Score: 85.1 bits (209), Expect = 1.760e-13
Identity = 76/265 (28.68%), Postives = 109/265 (41.13%), Query Frame = 1
Query:  529 AVGFWAQFSAVWWRQWTVQTRREEALWAMLVKNVLVGVLTATVFWKEGAMDRGDALIDPVVNDVTPNASNLLGILYFGTLYGLTGHLQAIPEIFEWK-RHLERERAAGMYSTTVYWLVSSTVNLPIILAGFVVYLNVCYWPLGLPAEFDKYAVFACINFMAALIGYSLAQALSAAMDTPQGAFAMWPLVFVAAANFAGFTIRLPVVRVWFTWLSELSFCRWIYQLMVVNQFG--------------DFDEGSELL---DLYFGGN 1269
            A  FW  F  +  R W  QTR    L    V      +L   V+ +   M R    I            +  GIL+F  +    G    I +I   + + + RERAA MY+   Y++ +  V LP+ L   VVY  V Y+  GL      Y +F  +  +    G  L   LSA+  + + A  + P   +    F+GF +    V VW  WL E+SF R+ +Q + VN+F               D DE  E L   D+  GGN
Sbjct:  352 ASRFWIPFKLLLARTWREQTRDTATLTIKYVMQTFFSLLFGVVYLR---MARDQTSIQ-----------DRTGILFFQAMNQAFGSAIGISKIIPQQLKVVSRERAARMYTPLPYYVSTFLVTLPLELIPGVVYGTVIYYMTGLREGVGHYLIFLAVMTLENFAGIGLGMCLSASFTSVEMAPQLAPAFVILFLMFSGFFLNESNVPVWLIWLREISFIRYAFQALCVNEFKGAEFSCDGSTGSCVDGDEHLERLKFDDITIGGN 602          
BLAST of mRNA_L-elsbetiae_contig5926.14401.1 vs. uniprot
Match: A0A7S4CF29_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4CF29_9EUGL)

HSP 1 Score: 84.7 bits (208), Expect = 2.370e-13
Identity = 65/271 (23.99%), Postives = 125/271 (46.13%), Query Frame = 1
Query:  427 WEGAPRAVDGDSTKQELL---RRRAWGAGGGRESATYAVGFWAQFSAVWWRQWTVQTRREEALWAMLVKNVLVGVLTATVFWKEGAMDRGDALIDPVVNDVTPNASNLLGILYFGTLYGLTGHLQAIPEIFEWKRHLERERAAGMYSTTVYWLVSSTVNLPIILAGFVVYLNVCYWPLGLPAEFDKYAVFACINFMAALIGYSLAQALSAAMDTPQGAFAMWPLVFVAAANFAGFTIRLPVVRVWFTWLSELSFCRWIYQLMVVNQFGDFD 1230
            + G+  A+  + T  E+L   +R  + A   R S    + FW   S    R      R       M+  +V   +L  +++++             V N+V P   N  G+L+F  + G   +L ++    E +    RERAAGMY  + Y++ +  ++LP+ L    ++  + YW +GL A +  +  +  I+++  +  YSL   +S    +   A  + PLV V     +GF + +  + V++ WL  +SF R+ ++ +++N+F   +
Sbjct:  331 YRGSEWAIATEKTINEILADLKRNQYEAPMPRRSTGRFMQFWVVAS----RAMKNNLRNPLKTLVMISISVFFALLIGSIYYQ-------------VSNNVNPGIQNRAGVLFFLAMNGAFSNLGSLELFLEGRNIFVRERAAGMYKASSYFVGTVLMDLPLPLLYCSIFTGIAYWMIGLQANWHCFFWYIVISYVINMCSYSLCLFVSCFAPSFAIANLIAPLVIVMFLLPSGFLVNIADLPVYWRWLKYVSFFRYGFEALMINEFSGLE 584          
BLAST of mRNA_L-elsbetiae_contig5926.14401.1 vs. uniprot
Match: A0A2G5UQ99_9PELO (ABC transporter domain-containing protein n=4 Tax=Caenorhabditis TaxID=6237 RepID=A0A2G5UQ99_9PELO)

HSP 1 Score: 84.3 bits (207), Expect = 3.120e-13
Identity = 54/232 (23.28%), Postives = 105/232 (45.26%), Query Frame = 1
Query:  523 TYAVGFWAQFSAVWWRQWTVQTRREEALWAMLVKNVLVGVLTATVFWKEGAMDRGDALIDPVVNDVTPNASNLLGILYFGTLYGLTGHLQAIPEIFEWKRHLERERAAGMYSTTVYWLVSSTVNLPIILAGFVVYLNVCYWPLGLPAEFDKYAVFACINFMAALIGYSLAQALSAAMDTPQGAFAMWPLVFVAAANFAGFTIRLPVVRVWFTWLSELSFCRWIYQLMVVNQF 1218
            +Y   F+ QF A++WR W    R    L   L++ ++  ++T  VF++          I+ ++ +   +  N+  +L F  +  +T  L  +           RE A G+Y T+ Y+L  +   LP  +   ++Y  + YW  GL   F  +   + +  +   +  S++ A++        A  + P+  V    F GF I    +  +FTWLS LS+ ++ Y+ + +N++
Sbjct:  358 SYNASFFTQFKALFWRSWLTVIRDPNLLKVRLLQIIITALITGLVFFQTPITPATIISINGIMFN---HIRNMNFMLQFPNVPVITAELPIVL----------RENANGVYRTSAYFLAKNIAELPQYIVLPILYNTIVYWFSGLFPNFWNFCFASLVTILITNVAISISYAVATIFANTDVAMTVLPIFVVPIMAFGGFFITFDAIPSYFTWLSSLSYFKYGYEALAINEW 576          
BLAST of mRNA_L-elsbetiae_contig5926.14401.1 vs. uniprot
Match: G0N7I5_CAEBE (CBN-WHT-1 protein n=1 Tax=Caenorhabditis brenneri TaxID=135651 RepID=G0N7I5_CAEBE)

HSP 1 Score: 84.3 bits (207), Expect = 3.200e-13
Identity = 56/231 (24.24%), Postives = 104/231 (45.02%), Query Frame = 1
Query:  526 YAVGFWAQFSAVWWRQWTVQTRREEALWAMLVKNVLVGVLTATVFWKEGAMDRGDALIDPVVNDVTPNASNLLGILYFGTLYGLTGHLQAIPEIFEWKRHLERERAAGMYSTTVYWLVSSTVNLPIILAGFVVYLNVCYWPLGLPAEFDKYAVFACINFMAALIGYSLAQALSAAMDTPQGAFAMWPLVFVAAANFAGFTIRLPVVRVWFTWLSELSFCRWIYQLMVVNQF 1218
            Y   FW QF A++ R +    R    L   L++ ++  V+T  VF++          I+ ++ +   +  N+  +L F  +  +T  L  +           RE A G+Y T+ Y+L  +   LP  +   ++Y  + YW  GL A F  Y   + +  +   +  S++ A++        A  + P+  V    F GF I    +  +FTWLS LS+ ++ Y+ + +N++
Sbjct:  374 YNASFWTQFMALFLRSYLTVIRDPNLLSVRLLQIIITAVITGMVFFQTPVTPATIISINGIMFN---HIRNMNFMLQFPNVPVITAELPIVL----------RENANGVYRTSAYFLAKNIAELPQYIILPILYNTIVYWLSGLYANFWNYCFASLVTILITNVAISISYAVATIFANTDVAMTVLPIFVVPIMAFGGFFITFDAIPSYFTWLSSLSYFKYGYEALAINEW 591          
BLAST of mRNA_L-elsbetiae_contig5926.14401.1 vs. uniprot
Match: A0A2H2IK31_CAEJA (ABC transporter domain-containing protein n=1 Tax=Caenorhabditis japonica TaxID=281687 RepID=A0A2H2IK31_CAEJA)

HSP 1 Score: 84.0 bits (206), Expect = 4.140e-13
Identity = 58/255 (22.75%), Postives = 108/255 (42.35%), Query Frame = 1
Query:  526 YAVGFWAQFSAVWWRQWTVQTRREEALWAMLVKNVLVGVLTATVFWKEGAMDRGDALIDPVVNDVTPNASNLLGILYFGTLYGLTGHLQAIPEIFEWKRHLERERAAGMYSTTVYWLVSSTVNLPIILAGFVVYLNVCYWPLGLPAEFDKYAVFACINFMAALIGYSLAQALSAAMDTPQGAFAMWPLVFVAAANFAGFTIRLPVVRVWFTWLSELSFCRWIYQLMVVNQFGDFDEGSELLDLYFGGNRPPLPLN 1290
            Y   FW QF A+ WR +    R    L   L + ++  ++T  VF++          ++ ++ +   +  N+  +L F  +  +T  L  +           RE A G+Y T+ Y+L  +   LP  +   ++Y  + YW  GL   F  +     +  +   +  S++ A++        A  + P+  V    F GF I    +  +FTWLS LS+ ++ Y+ + +N++    E   ++   F  N     LN
Sbjct:  362 YNASFWTQFEALSWRAYLTVIRDPNLLSVRLFQIIITALVTGMVFFQTPITPETIVSVNGIMFN---HIRNMNFMLQFPNVPVITAELPIVL----------RENANGVYRTSAYFLAKNIAELPQYIILPIIYNTIVYWMAGLYPSFMNFCFACLVTILITNVAISISYAVATIFANTDVAMTVLPIFVVPIMAFGGFFITFDAIPPYFTWLSSLSYFKYGYEALAINEW----ESVWIIPECFAKNATAFALN 599          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5926.14401.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LSM1_ECTSI9.660e-16652.03ABC transporter domain-containing protein n=1 Tax=... [more]
A0A6H5KKK8_9PHAE1.250e-15851.81ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
W7TH06_9STRA7.040e-2633.04Atp-binding cassette superfamily n=1 Tax=Nannochlo... [more]
A0A7S2B2D3_9STRA4.190e-1625.00Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
UPI00109B90681.160e-1425.96protein white isoform X2 n=3 Tax=Exaiptasia diapha... [more]
C1DYU8_MICCC1.760e-1328.68ATP-binding cassette superfamily n=2 Tax=Micromona... [more]
A0A7S4CF29_9EUGL2.370e-1323.99Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A2G5UQ99_9PELO3.120e-1323.28ABC transporter domain-containing protein n=4 Tax=... [more]
G0N7I5_CAEBE3.200e-1324.24CBN-WHT-1 protein n=1 Tax=Caenorhabditis brenneri ... [more]
A0A2H2IK31_CAEJA4.140e-1322.75ABC transporter domain-containing protein n=1 Tax=... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5926contigL-elsbetiae_contig5926:372..10782 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score514.6
Seed ortholog evalue7e-143
Seed eggNOG ortholog2880.D8LSM1
Hectar predicted targeting categoryother localisation
EggNOG free text desc.ATPase activity, coupled to transmembrane movement of substances
EggNOG OGsCOG1131@1,KOG0061@2759
COG Functional cat.V
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons12
Model size2049
Cds size2034
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816640.9441528-UTR-L-elsbetiae_contig5926:371..3861622816640.9441528-UTR-L-elsbetiae_contig5926:371..386Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5926 372..386 +
1691683705.6004183-UTR-L-elsbetiae_contig5926:371..3861691683705.6004183-UTR-L-elsbetiae_contig5926:371..386Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5926 372..386 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816640.9541397-CDS-L-elsbetiae_contig5926:386..4951622816640.9541397-CDS-L-elsbetiae_contig5926:386..495Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5926 387..495 +
1691683705.6108892-CDS-L-elsbetiae_contig5926:386..4951691683705.6108892-CDS-L-elsbetiae_contig5926:386..495Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5926 387..495 +
1622816640.9682364-CDS-L-elsbetiae_contig5926:582..8981622816640.9682364-CDS-L-elsbetiae_contig5926:582..898Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5926 583..898 +
1691683705.619549-CDS-L-elsbetiae_contig5926:582..8981691683705.619549-CDS-L-elsbetiae_contig5926:582..898Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5926 583..898 +
1622816640.9814603-CDS-L-elsbetiae_contig5926:981..12261622816640.9814603-CDS-L-elsbetiae_contig5926:981..1226Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5926 982..1226 +
1691683705.629614-CDS-L-elsbetiae_contig5926:981..12261691683705.629614-CDS-L-elsbetiae_contig5926:981..1226Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5926 982..1226 +
1622816640.9942958-CDS-L-elsbetiae_contig5926:2372..24791622816640.9942958-CDS-L-elsbetiae_contig5926:2372..2479Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5926 2373..2479 +
1691683705.639812-CDS-L-elsbetiae_contig5926:2372..24791691683705.639812-CDS-L-elsbetiae_contig5926:2372..2479Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5926 2373..2479 +
1622816641.0127034-CDS-L-elsbetiae_contig5926:3059..31431622816641.0127034-CDS-L-elsbetiae_contig5926:3059..3143Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5926 3060..3143 +
1691683705.6503453-CDS-L-elsbetiae_contig5926:3059..31431691683705.6503453-CDS-L-elsbetiae_contig5926:3059..3143Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5926 3060..3143 +
1622816641.0255797-CDS-L-elsbetiae_contig5926:3565..37541622816641.0255797-CDS-L-elsbetiae_contig5926:3565..3754Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5926 3566..3754 +
1691683705.6608944-CDS-L-elsbetiae_contig5926:3565..37541691683705.6608944-CDS-L-elsbetiae_contig5926:3565..3754Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5926 3566..3754 +
1622816641.0358796-CDS-L-elsbetiae_contig5926:5642..57741622816641.0358796-CDS-L-elsbetiae_contig5926:5642..5774Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5926 5643..5774 +
1691683705.6746633-CDS-L-elsbetiae_contig5926:5642..57741691683705.6746633-CDS-L-elsbetiae_contig5926:5642..5774Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5926 5643..5774 +
1622816641.0460691-CDS-L-elsbetiae_contig5926:6764..70391622816641.0460691-CDS-L-elsbetiae_contig5926:6764..7039Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5926 6765..7039 +
1691683705.684301-CDS-L-elsbetiae_contig5926:6764..70391691683705.684301-CDS-L-elsbetiae_contig5926:6764..7039Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5926 6765..7039 +
1622816641.0558853-CDS-L-elsbetiae_contig5926:7349..74341622816641.0558853-CDS-L-elsbetiae_contig5926:7349..7434Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5926 7350..7434 +
1691683705.6935923-CDS-L-elsbetiae_contig5926:7349..74341691683705.6935923-CDS-L-elsbetiae_contig5926:7349..7434Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5926 7350..7434 +
1622816641.0688453-CDS-L-elsbetiae_contig5926:7882..80441622816641.0688453-CDS-L-elsbetiae_contig5926:7882..8044Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5926 7883..8044 +
1691683705.7098038-CDS-L-elsbetiae_contig5926:7882..80441691683705.7098038-CDS-L-elsbetiae_contig5926:7882..8044Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5926 7883..8044 +
1622816641.0822577-CDS-L-elsbetiae_contig5926:10015..101141622816641.0822577-CDS-L-elsbetiae_contig5926:10015..10114Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5926 10016..10114 +
1691683705.7217898-CDS-L-elsbetiae_contig5926:10015..101141691683705.7217898-CDS-L-elsbetiae_contig5926:10015..10114Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5926 10016..10114 +
1622816641.092975-CDS-L-elsbetiae_contig5926:10551..107821622816641.092975-CDS-L-elsbetiae_contig5926:10551..10782Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5926 10552..10782 +
1691683705.7306986-CDS-L-elsbetiae_contig5926:10551..107821691683705.7306986-CDS-L-elsbetiae_contig5926:10551..10782Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5926 10552..10782 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5926.14401.1prot_L-elsbetiae_contig5926.14401.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig5926 387..10782 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig5926.14401.1

>prot_L-elsbetiae_contig5926.14401.1 ID=prot_L-elsbetiae_contig5926.14401.1|Name=mRNA_L-elsbetiae_contig5926.14401.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=678bp
MLPARGQNPAEFILLAAKAAMTAAAAAAAAEAGEGGPGEGARSSPGLSLS
YSCSSFASSSCSLSSRVIGPLIGVDPSSLQALGDGGDGSVVGDSLFGDAE
QGLHLYEDPLQPQQQQQQQRSSSSSRSRSPWRQRRRRWEGAPRAVDGDST
KQELLRRRAWGAGGGRESATYAVGFWAQFSAVWWRQWTVQTRREEALWAM
LVKNVLVGVLTATVFWKEGAMDRGDALIDPVVNDVTPNASNLLGILYFGT
LYGLTGHLQAIPEIFEWKRHLERERAAGMYSTTVYWLVSSTVNLPIILAG
FVVYLNVCYWPLGLPAEFDKYAVFACINFMAALIGYSLAQALSAAMDTPQ
GAFAMWPLVFVAAANFAGFTIRLPVVRVWFTWLSELSFCRWIYQLMVVNQ
FGDFDEGSELLDLYFGGNRPPLPLNALYVGLFYAAALLLALYFLQPRGSR
LKVLKENPTLLTRERLSVAALGGRREEDPLGGSRRAEGGGRGGGGWGGPG
LGRQKRQEEEGGEDSLLVETFDADGNDGDGPLYYLDEGSKVKKKKKKSKK
SPQARKAMCEKFYSLYSLSRSPLRAPLLGGARGGFDKGGDIESVREAEVQ
QGSRVAFSNLHYYVYLREGEGGSKRSKRGGGGGGGGGVVGRAAAADQPAA
PANRKEESHVLRGVTGVVSPGQIMAIMG
back to top

mRNA from alignment at L-elsbetiae_contig5926:372..10782+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig5926.14401.1 ID=mRNA_L-elsbetiae_contig5926.14401.1|Name=mRNA_L-elsbetiae_contig5926.14401.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=10411bp|location=Sequence derived from alignment at L-elsbetiae_contig5926:372..10782+ (Laminarionema elsbetiae ELsaHSoW15)
AGGCCGGACCTCGGGATGCTCCCCGCCCGGGGCCAAAACCCCGCCGAGTT TATCCTGCTCGCAGCCAAGGCGGCCATGACGGCGGCGGCGGCGGCCGCGG CGGCGGAAGCAGGAGAAGGAGGGCGTCCCGATTCTCCCGGACGACGCGGC CGCCCCGGAGGAGAGCATTTCTTTCCCGGAGGCAGTGGCGGCGGCGGCGG CGGCGGCGGAGCCGGCGAGGGTGCGCGTTCTTCCCCGGGCCTCTCCCTCT CGTACTCGTGCTCCTCGTTCGCTTCCTCCTCCTGCTCCCTCTCCTCCCGG GTTATCGGGCCGCTGATCGGAGTTGACCCGTCCTCGCTCCAGGCCCTGGG CGACGGCGGCGACGGCAGCGTCGTCGGGGATAGCCTGTTCGGCGACGCAG AGCAGGGGCTTCATCTCTATGAGGACCCGCTGCAGCCGCAGCAGCAGCAG CAGCAGCAGCGCAGCAGCAGCAGCAGCCGCTCGCGCTCTCCTTGGCGGCA GCGGCGGCGGCGGTGGGAGGGGGCTCCGTTGTGTCGGACGGGTCGGACGA CTCCGGCGGCGGCGGCGGCGGCGGCGACGGCGACGGTGACGACGGCGGCT ACTACCGCAGGCGCGCGGTGGACGGGGACTCGACGAAGCAGGAGCTGCTG CGGCGGCGGGCGTGGGGCGCCGGCGGGGGCAGGGAGAGTGCGACGTACGC GGTGGGGTTCTGGGCGCAGTTCTCGGCGGTGTGGTGGCGGCAGTGGACGG TGCAGACCCGCCGGGAGGAAGCGCTGTGGGCGATGCTCGTGAAGAACGTC CTCGTCGGCGTGCTGACGGCGACGGTGTTTTGGAAGGAAGGGGCGATGGA CAGAGGTGGGGTGGGGGTTGGGGAGGGGGGGCACGGCCTTCGCGAAGAAT TCCTGTCTACATACAAATTTACCGTATATAGGTGACATAAGATAAGACAC CCCCTAGACCGACTTTCAAAGCTCAAGTACTCCACAGCCAAGCGTAGCGT CAGTCCCGAAAAAGGGCGGCGTTGGAAAGATCTCGCCGAGAGCCTTCCGA AAATGTGGCGTTTGTGGTTAGAATCGTATTCGTTGCGGAATAACCAAGCT TTCAATGTCGGTCCAGGGGGTGTCTTATCTTATGTCACCTACGGTAATCA TTTATATTTTTGTGTTTAGTTAGTACTTGTAGAAAATAATCGACAGGGGT TCTGTGACCCTAACCCTGGCCCTAACTCCAACCCCAAACCGACCCCCCCC CCATTAGCCGTTTCCATACTTTTATCCTCTATGATTTCTTCCGGTAAAAC TCGCGAGGGCTGCTGAGTGGGGGGAGGGGGGGGGGGGCTACATAGCTAGC GAGCTCTGCAGCAACGAACACTTTTTAGTGCCGGCATATACTACTTCGTG GCTGCTGCTGTCTTGGTCAGTGCACCATCTTCACCTCATGGGGTAACTCA GAGACTCCGTTTTGAGCCTGCTGCTCGATGCAGAACGGCACACAGAGTTC TCTTTTTCGAAATTATCGCAGGCTTGTGTGTACAAGAGGCGTCGTTACCT TGTAGGTATCCGCAAAGTCGCGACTAGTTCGTGCTTCTGTATATACGAAC TCCGTGTATGCCAACCCAGTGACAAAGGGTGGTCTCGGAGGTGGCGGCCG AGGTGGAAATGCAACCGTGGTGACCGTGCCGGTGCCGGGGTGTTTCCCAG TCCCACACAGGGGGCTCACGTGGAGATTGACCCCCCCCCCCCCCCCCCCC CCCCCCGGAGTCTCTCCATTCTCAGGCGCGATGTCATAAAAACAGTGGCA GTCAGTCGCGTATAAATATATAAATATATATCATATTTATGTAGTCGTCC CCTCCGTGGCGATGACGCCATCACCACCACCGTCGTCGCCCTTGGCGTTT CTCGCAGTCCCGCGCTGTATCATATGTCCTTGTTGTCGTGATCGATATCA CCGCTCCCCACCGCCGCTCTCGCCCCGCCGTCGCTCACCTGTCAATCTCA GGCGACGCCTTGATCGACCCCGTCGTCAACGACGTCACCCCGAACGCTTC CAACCTTCTCGGCATCCTCTACTTCGGGACGCTCTATGGGCTCACGGGAC ATCTACAGGTATCTATGGATGCAGAGGCATGTATATATATATGCATGCGT GCCTATACGTTCTACATACATCCCTTACTGGTCTCTCTACTGCTGTGTGC TGGCTGCTGGTCGCACACGACGGCGCGTGCTGCCGCTGCTGCTGCTGCTG CTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCCGCCGCCGTTTTT GTGACCCCATTTCGTTGGTTCCGATCCTTTTTGTGGCATAGCGTCTAGAG CAACGGAGGTCGAGCCGTTGTCACCACCGGTTTGGGTCATTGTCGTTCCT CGCCGGAGGTTTACGTTGCGAGGAAATTAATATTTAACGTGTTTACAGCG TACATATATATGACTTCGAAGTACAAGTGTAGCATTGCTGCGTGTGCCTT TTGATATGTTGTTCTCCTCCTTGTTGCCGCATTGTCTCCGAAATCATCCC CCTTTTTTCTTTCTTTTCCCGGCACGCTCTGTATTCGCTGCGGGTGCCGC CCCCCACCCCCACCCCCCCCACCGCGCCCCACCGTGCCCCGCCTGCCCGC CGTGATCTTGCCTTCCGTCCACCTGCTGTACCCCGCAGGCGATCCCGGAG ATTTTCGAGTGGAAGCGGCATCTAGAGAGGGAACGAGCGGCGGGGATGTA TTCAACAACCGTGTACTGGCTGGTGAGGACCTGCCCCCCCCCCCCCCCCC CCCCCCCCCCACAAGATTTTTTTTTTCTCTTTCTTTCGTTTTTTTTTTTT TTTTTTTTCTCTTTTTTTTTTTTTTTTTTTTATNNNNNNNAGAGGGGGAC GGCAGTGAGAGGAGATGAGCGGGGCGGGGTGGTGTGCCTCAGCTCCTGCC TGTGTGGGGAGGGGTAGGCCCCCCCCCCCCCCCCCCCCCTCAATAATATG TTTCTGTTCTTATTTTCCTGCGGTTTTCTTTTTTTTGTTGCCCGTTTCTT TTTGTTTCTTATTTGATTTTATTTGTCTCACCTTTCTGCCGTCCTGTTCG CCCTGATGCACGCGCGGTGGTGGTGGTGGTGGTGGTGGTGGTGATGTCCG CCTTGCCTGCCTGCCTGTCCTTCTTCCTCCGGGGGGGGGCGCAGGTGAGC TCGACGGTGAACCTCCCCATCATCCTCGCCGGCTTCGTGGTGTACCTGAA CGTGTGCTACTGGCCCCTCGGCCTCCCCGCGGAGTTCGACAAGTACGCCG TATTCGCGTGCATCAACTTCATGGCGGCGCTCATCGGGTACTCGCTGGCG CAGGCGCTGTCGGCGGCCATGGACACTCCTCAGGTTTGTGTGGGCCAGTT GTCTACGCGGGGTTTGCATACTTTATATCCCAGCCAACATATGGGATAAA GTATGGAAACCCAACATACGAGATAAAGTATGGAAACCTAGCATATGGGA TAAAGTATGGAAACCTAACATATGAGATGAAGTATGGAAACCTAACATAT GGGATAAAGTATGGAAACTTAACATATAAAGTATGGAAACCTAACATATG AGATAAAGTATGGAAACCTAACACATGGGATAAAGTATGGAAACCTAACA TACGAGATAAAGCATGGAAACCTAGCATATGGGATAAAGTATGGAAACCT AACATATGAGATAAAGTATGGAAACCTAACATATGGGATAAAGTATGGAA ACCTAACACATAAAGTATGGAAACCTAACATATGGGATAAAGTATGGAAA CCTAGCATATGGGATAAAGTATGGAAACCTAACATATGAGATAAAGTATG AAAACCGGGAAAGGGGGGTCGGTGGTTGGGGTTAGGGTTAAGGGTTAGGG TTATTTGTCTAGATAAACTTAATTCCCGGCGCAGGCAGTCCGGTCCGTGT GGGTGCGCGCGCGACCGCGACCGCGACCACAACCGCGCGGCTTTTCAGCA CGTGCTCTCTCTTGGAACATGCGTCTCCGTCAAGACTTGTTTTTTTATGT ATGTATGTTCGTGTGGTCTCACACAAGATATCTAACTTTGTAACGCATTG TCAACATCTCCGTTCGGAGAGATACGATCTGCCCCCCACCCTCTCCCCCC CATAAACGGATTTCGCTTCGTGGCACCGAGGGTAGTGTGTATGCGTACGC TTACGAGGCACGATCCGCTCAAAACGGGTTTTACGCATGGCACAGGGGAA CTTTAACTTTACCCTTACAAATGAATACCTTATATTGTACCACGGAACAC CCCCCCCCCCCTTGGGTCTCTTTTCCTCATGCCGATTTGCCCTCTCGCCT GCATCACCCCCCCCCACACACACACACACACACACACACACACACACACG TGTTGCTCCCGGTACAGAAACCCCTTGTTTTTCGAACGACCGCTTGCAGT CACGTCCTTTGTCACCGCAAATACTCCCACCACTAGCTCGTTTCTGGGTG CGAGATCAAAGGGGGGCCTCGAGAAGTTGTCATCTTCCGTCCGCAAATTT TGATCTATGCTTTTCTTTTGCTTGAAACTGAAGAAGAGCTGTGCCGTCGA AACTGAAGAGCAAGCATTTTGGTGCAGGATCGCGCTCTTTTTTAGCTCCT CCGAGGCAACTTTCAACGCAAAGTTTCTACGTCAAAAAGTTGATCAAATT TAACATAAATGCCGTCACGGTTATAGCTAAAGAAACAAAGCGCCTAAAAT ATCGTGGCACTATTTTGGATCGCCACTACGACGGCCTGGCGAGGCCTACA AAAAACCACAAATGTTGACCAAACCAAAGTCTAAATGCAAGATGTGCAGC AGCGGGGTATCCCAAAGGAATCAACCCTGCCTGAAGAAAGATCACGCGTC TACTTCCAAAAGCATCACAGCAATTCAGTGCGGAGGGTGCCAGCGGGACC TTTGGGCCAAATTTTCTAACTCACAACGGTGCTCAAATCAAGCGGAACTC CCAGGGTGTGTTCCCTATGATATGAGCCTTCGAATAAAGCTTGGCACTTT TTGGGATCAGCACTATTGGAGGAGGTTGGCTGGAATGAAGCACATATCCC TCAGCGAAGGACTGATTTTTGGCGCCGTTGGAAGGAAAAAATGCGGAGAA AAAAAAAGAAAAGACGCTGTCTGTTTTAGTGTATTTAGAGAGCAACACGT GTGCCCCACCCACCCACCTCCGCTATGCGGTGCCCCTATTGTATCCCGCC GCATGTTGTTGATGTGACCAGGGCGCGTTCGCGATGTGGCCTCTCGTGTT TGTGGCGGCGGCAAATTTTGCGGGCTTTACCATACGCCTCCCCGTGGTGC GGGTGTGGTTTACCTGGCTGAGTGAGCTGAGCTTCTGCCGTTGGATCTAC CAGGTGAAAAAAAATAAGGAGTAACTTTTGAGGAGATTGATCTTGATTGG TCCGGATGTGCTTGCCTGCTTGCCGGCTTGCCTGCCTTCCTGCTTGCCTG CCTGCTTGCCTGCCTGCTTGCCTGCCTGCCTACGCGGGAGAGCACTCAGG TTCGGATTGTGAGCTGATGTGCGCGACTGGCGTTGTCAAAGGTCGGCTCA CAGCTATCCCACGCAGATCGGATCCATCTCGCGCTCGGTGCTTGCGCCTG TCTCTTGTCTGTTCCGTCTCTGTTCGCTCATTGTTCGGTACTGCCTTTAT TCGGGCCGCCATGTTTTGAGGTTGCGGTCTCTACAGGGGAGGCCGGCATC TGCACTCGCAGTACACATGGAGGGGGAGGGGGAGGGGGGGCCTCCATCAC ATGCGCGTGAAGTTGGAGTTTGATGAGCGCCCTTCCTTCTGCGCGTTGGA AAACTCTGGTCCGCACTTTTTTGGCATATGTATGTATGTTCCGCTAAGTA TGGTACGGAAACCGCTATGGTACGGACAGCGTTTCTTTTTCCCGTGGGCT TGTTTTTCGTTTTTCCGCGCTGAGCGCCGCCTTGCGTGGCATATAGACCG CGCCAAGAGGTATCTCATGTGCTGCCATTTCGGTGGTTTATTAAAAGTCT GAGGCGACTGCTTCTTCCAGTCATTCTTTGATCACGACTCTTAAAATGAC CGCTCCGCTCAGGTTTTCACCTGAGTACCCATGAGGTGCAGATGCTCAAG GTGTGTGTTATACATATACTTCGTATGTAAGACGACCAAACCTGAGAACG CCACCAAAAACCATCCCGTGACAAGTAAGCAATATTAATCACTTTTTTTT TTTTTCACGTATTTTACATCGAAAATCAAACCACGAAATAAAAAGCGCAT TCCAAAAAAACTTTTCCAAACATCAAATTAATATTAACAAACATTAAATC AAATCCCGAAAAAAAAACTCACCTTTAAAAAACAAAAAAACAGCTGATGG TGGTGAACCAGTTCGGGGACTTCGACGAGGGCTCCGAGCTCCTGGACCTC TACTTCGGCGGCAACCGCCCCCCCCTCCCCCTGAACGCGCTGTACGTGGG GCTCTTCTACGCCGCAGCCCTCCTGCTGGCCCTCTACTTCCTGCAGCCGC GGGGCTCGCGCCTGAAGGTCCTCAAAGAGAACCCGACGCTGCTGACGCGG GAGAGGCTGTCGGTGGCGGCCCTCGGGGGGCGCCGCGAGGAGGACCCCCT GGGCGGCTCGCGGCGGGCGTCGTCTCCACCGGCGCCCCCCCCGCAGTCGT CCTCGGAGCAGCCTCGGCCGCAGCCGCAAGAGCAGAAGCAGCAGCAGCAG GAGCAGCAGCAGCAGCAGCAGCAGATGCAGCAGCGGATGCAGCGGATGCA GGAATTGACGACGGCGGCGCTGCAGCCGGAGGCCTTGAACGGTGGCGGTG GTGGCGGCGGCGGCGGCGGCCCCAAGAACCGGGAGTACTACTCCGCCTTC GAAACGGCCTCCGCCGGCGTCGGCGCTGTTGTTGTTGCGGGCGGCGGCGG CGGCGGCGGCGGCGGGGGGGTCTTCAAGAGAGGGGGGTGGCCGGGGGGGT GGGGGTTGGGGGGGGCCGGGGTTGGGGAGACAAAAGAGGCAGGAAGAGGA GGGGGGGGAGGACGTCTGACGGGGAGGCTGAGGAAGAGCTCTCGCGCAAG TGTAAGCAACAGTTGCAGCTTGGGTCGGGGAAAGAAAGGTTTAGCCTACA GTAGTATCAGTCGAGGATGTCTAGTTTGGAACAGCGCGAGACTACTGTAC TTGCAAGCGCAAAGCTCCCCTGTGTTGCTCGAAGCGCACCAGGAATGACG GCCACGGGCATGAACAGCAGTCCGATCACGGAGATAGTCGAACTACTCTT CTTTTTTTTTTTTTATCTTCATACCGCGCCCGCAAGCATCGTACATCATG CCCCGGTAGTGCGCACCCACTTCGTGTCTCGGTTTCTCCTCCCGAAGAAC GCAACGAGGGGGGAGGTAGTGTATAGTTATCCCGATTGTTATTTAGTGAA GACTAATGGCAATGTTCGTGGAAATCGTCGCGCGCTTTTTCTCGGAAAAT GCCGACCGCAGAGCCTGCTGGTGGAGACCTTTGACGCCGACGGAAACGAT GGAGACGGCCCGCTGTACTATCTTGACGAGGGCAGCAAGGTAAAAAAAAA AAAAAAAAAAAGCAAAAAAAGCCCGCAGGCGAGGAAAGCAATGTGCGAAA AGTTTTATAGTCTGTATTCGCTTGTTTTCTGNNNNNNNNNNGGGGGAGAC CTTTGACGCCGACGGAAACGATGGAGAAGGCCCGCTGTACTATATTGACG AGGGAAAAAAGGAAAAAAAAAAAAAAAAAAAAAGGCAAAAGCAGCCAGCA TTGGAGAAAAGAAATGAAGAAAAGTTGTACTCGTCCGAAATCAGCCGTCA GCTGCTGTGCCTGCTTCTTTTGGCTCCCTGCCTGTCGGCCTATCTGTCTA TCTGTCTGTCTGTCTGTCTTGTCTTGTCTGTCGGCCTGTCTGTCAGCCTG TCTATGTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTC TGTGTCTGTTTTTCTGTCTGTCTGTGTTTGGGTTTTTCACGGCCTCTGAT TGGTACCGTAGGTGACATAAGATAAGACACCCCCTGGACCGATATTGAAA GCTTGGTTACTCCGCAACGAATACGATTCTAAACCACAAGCGCCACATTT TCGGAAAGCTCTCGACGAGATCTTTCCAACGCCGCCCTTTTTCGGGACGG ACGCCACGCTTGCTGTGGAGTACTTGAGCTTTGAAAGTCGGTCCAGGGGG TGTCTTTTATCTTATGTCACCTACGGTAAATGGAGGCCGCGTGCGTCCGC CCCGTCCCGCCCGCACACCTCGGGCGCGTCCGCGTTTCCTGCCTGCCGGT TTAGCCCGCCGACCCTCCGTTGGCCATGTCGCCAGGGATGGGGGGTGTGT GATGTGCTCCATATCTACTAGATACCGTTACGGGAGCTGTGGTCGTTATG AGCAGCCCGGCTGTTTTGAGCTTTCTGCCCCCCCCCCTCCGCTTGAACAG CTCGAACAGCTGCTGTCGACAAACGTCAGTGTAAGATCTTTCCTGCAAAA ACCTGCAGCGGTCTTTTTTTTGAACGATGTGCCGGCCAGCGGCAAAATAT AACCCTCCCTGTAAGGTTGAGATGGCCCGCACGCACAGCCCGCTACTCGA TAAATCTTCGCCTTTCTTGATGACTACCCCGAGACAGCTGAAGGCAGCAT AGTTTTTCTGTAACGTTCATGACACGCACGGTCTGTGGTTCTCGCCTCTA TCCCAAGGTGCACGACGTAAGCGGGTTCTGGTTCTTTAGTGCGGCAGTTG TTGTCGCGCTGACACTTACTTCCCTCAGAAAATTCAAAACAAGAGTGTTA CGCAACCACGCAACCCGAGCAGCAGTCAGCAGCAGGTCAAGCAGTCAACA AGTAATCTAGCTGTTCTTCTCGTGCTGTTTTTGTTAATTGTTCCGGCGAA CACACACAAACAAGCACATACACACACGCGGAAGCCGGCGCAACATTTCC CGGCGTTTTTTGTTTCTTTCCCCCTGTGTCCACTAAAAGTATATTTGAAA TCGTTGAAAACGCTTCCCAAGTCGAGCAAAACAGCTGCAGGTATCGGACG ATTGGTCTGCTCTCTTGCTTCACCCTCTGGAGTGTGTACCCTTGAGCAAC ATCTGAAAGGGAGACTTGTATATACTCCATTCATATACGTGTGCAGAGCT TCGGCTTCAGCCAAACACCAGTAGCAAACATGAACATTGAACCCCCCACC AAAAAGGAAAATTCCTCCACAAACGAGCGCGACCGACCCCCCTGGTTTTC TTCGCCCACGCGCGACTTTCTTTTTTTTTTTTTTTTTTTTTTTAAACCGG CATTGGGAAAATTTTTTTGAGCGGAAGGAAAAAAAAAAAAAAGAAAAAAC ACAAAGCGGGAAAACACACCCAACCCCCCCCCCCCCCCCCCCCCCCCCCC CCACGGTCCTCCACACCGTTACCGTTTGCTAGAGAGGAGGCCGGTCGGTG TCGACCCTTTCGACGCCAACAGCCGGCTCGGCGATGATCAACAGCGCGGC CCTCATCGTCGATCACGAGGCGGGCGCGGCGGACCGGCGCTACGGGGGCC CGGACGACGACGACGACGACGACGACATCGACCCCGATATTGAGTCTCGG TCCCCTTTGCGGGCCCCCCTGCTTGGGGGGGCAAGGGGGGGCTTCGACAA GGGCGGGGACATCGAGAGCGTGCGAGAGGCAGAGGTGCAACAAGTGAGTG GTGGATTCATTGGATTTTTTTTCACTTCGTGTGAGTGGATGGCCCGTTTT TCTCTCTCTCTCTCTCTCTTTTCTCGACATAAGAAGCGAGAAATGCACGG ATGGCCGTACATGGGAAAGCTGTTGGTTGCCAGTGTTGTGTTTGTTTTGA ACACGCGTGGCCACAAGTGTGCTGAATCTTGCAATCTTAATAACGTAGTA GGTGTTTGGGAGGCGGGGGGGGGAGGGGGGCGGGGGGTTGCCCGTGGGAC TCCTGGTGGGTGGCTATGTCAGACTGACTCCCGGCAAGACCACAATTCGG TTTGAGTGGTTCTAGTGAAGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTT GCTGAGCCCGTTTTCCCGGGTATCGGTCGTGCGGGGGCGGTCGTCGTGTC GTCTTGTCTCGGCGCGTCATTTGCGCGCAGGGCTCCCGCGTGGCGTTCTC CAACCTGCACTACTACGTCTACCTCCGCGAAGGGGAGGGGGGCAGCAAGC GCAGCAAGCGCGGCGGCGGCGGCGGCGGCGGCGGCGGTGTGGTCGGGCGT GCGGCAGCCGCCGACCAGCCCGCTGCCCCGGCAAACCGCAAGGAGGAGTC GCACGTCTTGCGGGGGGTGACTGGAGTTGTGTCGCCGGGCCAGATCATGG CGATCATGGGT
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig5926:372..10782+

>mRNA_L-elsbetiae_contig5926.14401.1 ID=mRNA_L-elsbetiae_contig5926.14401.1|Name=mRNA_L-elsbetiae_contig5926.14401.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=4068bp|location=Sequence derived from alignment at L-elsbetiae_contig5926:372..10782+ (Laminarionema elsbetiae ELsaHSoW15)
ATGCTCCCCGCCCGGGGCCAAAACCCCGCCGAGTTTATCCTGCTCGCAGC
CAAGGCGGCCATGACGGCGGCGGCGGCGGCCGCGGCGGCGGAAGCAGGAG
AAGGAGGGCATGCTCCCCGCCCGGGGCCAAAACCCCGCCGAGTTTATCCT
GCTCGCAGCCAAGGCGGCCATGACGGCGGCGGCGGCGGCCGCGGCGGCGG
AAGCAGGAGAAGGAGGGCCCGGCGAGGGTGCGCGTTCTTCCCCGGGCCTC
TCCCTCTCGTACTCGTGCTCCTCGTTCGCTTCCTCCTCCTGCTCCCTCTC
CTCCCGGGTTATCGGGCCGCTGATCGGAGTTGACCCGTCCTCGCTCCAGG
CCCTGGGCGACGGCGGCGACGGCAGCGTCGTCGGGGATAGCCTGTTCGGC
GACGCAGAGCAGGGGCTTCATCTCTATGAGGACCCGCTGCAGCCGCAGCA
GCAGCAGCAGCAGCAGCGCAGCAGCAGCAGCAGCCGCTCGCGCTCTCCTT
GGCGGCAGCGGCGGCGGCGGTGGGAGGGGGCTCCCCGGCGAGGGTGCGCG
TTCTTCCCCGGGCCTCTCCCTCTCGTACTCGTGCTCCTCGTTCGCTTCCT
CCTCCTGCTCCCTCTCCTCCCGGGTTATCGGGCCGCTGATCGGAGTTGAC
CCGTCCTCGCTCCAGGCCCTGGGCGACGGCGGCGACGGCAGCGTCGTCGG
GGATAGCCTGTTCGGCGACGCAGAGCAGGGGCTTCATCTCTATGAGGACC
CGCTGCAGCCGCAGCAGCAGCAGCAGCAGCAGCGCAGCAGCAGCAGCAGC
CGCTCGCGCTCTCCTTGGCGGCAGCGGCGGCGGCGGTGGGAGGGGGCTCC
GCGCGCGGTGGACGGGGACTCGACGAAGCAGGAGCTGCTGCGGCGGCGGG
CGTGGGGCGCCGGCGGGGGCAGGGAGAGTGCGACGTACGCGGTGGGGTTC
TGGGCGCAGTTCTCGGCGGTGTGGTGGCGGCAGTGGACGGTGCAGACCCG
CCGGGAGGAAGCGCTGTGGGCGATGCTCGTGAAGAACGTCCTCGTCGGCG
TGCTGACGGCGACGGTGTTTTGGAAGGAAGGGGCGATGGACAGAGGCGCG
CGGTGGACGGGGACTCGACGAAGCAGGAGCTGCTGCGGCGGCGGGCGTGG
GGCGCCGGCGGGGGCAGGGAGAGTGCGACGTACGCGGTGGGGTTCTGGGC
GCAGTTCTCGGCGGTGTGGTGGCGGCAGTGGACGGTGCAGACCCGCCGGG
AGGAAGCGCTGTGGGCGATGCTCGTGAAGAACGTCCTCGTCGGCGTGCTG
ACGGCGACGGTGTTTTGGAAGGAAGGGGCGATGGACAGAGGCGACGCCTT
GATCGACCCCGTCGTCAACGACGTCACCCCGAACGCTTCCAACCTTCTCG
GCATCCTCTACTTCGGGACGCTCTATGGGCTCACGGGACATCTACAGGCG
ACGCCTTGATCGACCCCGTCGTCAACGACGTCACCCCGAACGCTTCCAAC
CTTCTCGGCATCCTCTACTTCGGGACGCTCTATGGGCTCACGGGACATCT
ACAGGCGATCCCGGAGATTTTCGAGTGGAAGCGGCATCTAGAGAGGGAAC
GAGCGGCGGGGATGTATTCAACAACCGTGTACTGGCTGGCGATCCCGGAG
ATTTTCGAGTGGAAGCGGCATCTAGAGAGGGAACGAGCGGCGGGGATGTA
TTCAACAACCGTGTACTGGCTGGTGAGCTCGACGGTGAACCTCCCCATCA
TCCTCGCCGGCTTCGTGGTGTACCTGAACGTGTGCTACTGGCCCCTCGGC
CTCCCCGCGGAGTTCGACAAGTACGCCGTATTCGCGTGCATCAACTTCAT
GGCGGCGCTCATCGGGTACTCGCTGGCGCAGGCGCTGTCGGCGGCCATGG
ACACTCCTCAGGTGAGCTCGACGGTGAACCTCCCCATCATCCTCGCCGGC
TTCGTGGTGTACCTGAACGTGTGCTACTGGCCCCTCGGCCTCCCCGCGGA
GTTCGACAAGTACGCCGTATTCGCGTGCATCAACTTCATGGCGGCGCTCA
TCGGGTACTCGCTGGCGCAGGCGCTGTCGGCGGCCATGGACACTCCTCAG
GGCGCGTTCGCGATGTGGCCTCTCGTGTTTGTGGCGGCGGCAAATTTTGC
GGGCTTTACCATACGCCTCCCCGTGGTGCGGGTGTGGTTTACCTGGCTGA
GTGAGCTGAGCTTCTGCCGTTGGATCTACCAGGGCGCGTTCGCGATGTGG
CCTCTCGTGTTTGTGGCGGCGGCAAATTTTGCGGGCTTTACCATACGCCT
CCCCGTGGTGCGGGTGTGGTTTACCTGGCTGAGTGAGCTGAGCTTCTGCC
GTTGGATCTACCAGCTGATGGTGGTGAACCAGTTCGGGGACTTCGACGAG
GGCTCCGAGCTCCTGGACCTCTACTTCGGCGGCAACCGCCCCCCCCTCCC
CCTGAACGCGCTGTACGTGGGGCTCTTCTACGCCGCAGCCCTCCTGCTGG
CCCTCTACTTCCTGCAGCCGCGGGGCTCGCGCCTGAAGGTCCTCAAAGAG
AACCCGACGCTGCTGACGCGGGAGAGGCTGTCGGTGGCGGCCCTCGGGGG
GCGCCGCGAGGAGGACCCCCTGGGCGGCTCGCGGCGGGCCTGATGGTGGT
GAACCAGTTCGGGGACTTCGACGAGGGCTCCGAGCTCCTGGACCTCTACT
TCGGCGGCAACCGCCCCCCCCTCCCCCTGAACGCGCTGTACGTGGGGCTC
TTCTACGCCGCAGCCCTCCTGCTGGCCCTCTACTTCCTGCAGCCGCGGGG
CTCGCGCCTGAAGGTCCTCAAAGAGAACCCGACGCTGCTGACGCGGGAGA
GGCTGTCGGTGGCGGCCCTCGGGGGGCGCCGCGAGGAGGACCCCCTGGGC
GGCTCGCGGCGGGCAGAGGGGGGTGGCCGGGGGGGTGGGGGTTGGGGGGG
GCCGGGGTTGGGGAGACAAAAGAGGCAGGAAGAGGAGGGGGGGGAGGACA
GAGGGGGGTGGCCGGGGGGGTGGGGGTTGGGGGGGGCCGGGGTTGGGGAG
ACAAAAGAGGCAGGAAGAGGAGGGGGGGGAGGACAGCCTGCTGGTGGAGA
CCTTTGACGCCGACGGAAACGATGGAGACGGCCCGCTGTACTATCTTGAC
GAGGGCAGCAAGGTAAAAAAAAAAAAAAAAAAAAGCAAAAAAAGCCCGCA
GGCGAGGAAAGCAATGTGCGAAAAGTTTTATAGTCTGTATTCGCTTAGCC
TGCTGGTGGAGACCTTTGACGCCGACGGAAACGATGGAGACGGCCCGCTG
TACTATCTTGACGAGGGCAGCAAGGTAAAAAAAAAAAAAAAAAAAAGCAA
AAAAAGCCCGCAGGCGAGGAAAGCAATGTGCGAAAAGTTTTATAGTCTGT
ATTCGCTTTCTCGGTCCCCTTTGCGGGCCCCCCTGCTTGGGGGGGCAAGG
GGGGGCTTCGACAAGGGCGGGGACATCGAGAGCGTGCGAGAGGCAGAGGT
GCAACAATCTCGGTCCCCTTTGCGGGCCCCCCTGCTTGGGGGGGCAAGGG
GGGGCTTCGACAAGGGCGGGGACATCGAGAGCGTGCGAGAGGCAGAGGTG
CAACAAGGCTCCCGCGTGGCGTTCTCCAACCTGCACTACTACGTCTACCT
CCGCGAAGGGGAGGGGGGCAGCAAGCGCAGCAAGCGCGGCGGCGGCGGCG
GCGGCGGCGGCGGTGTGGTCGGGCGTGCGGCAGCCGCCGACCAGCCCGCT
GCCCCGGCAAACCGCAAGGAGGAGTCGCACGTCTTGCGGGGGGTGACTGG
AGTTGTGTCGCCGGGCCAGATCATGGCGATCATGGGTGGCTCCCGCGTGG
CGTTCTCCAACCTGCACTACTACGTCTACCTCCGCGAAGGGGAGGGGGGC
AGCAAGCGCAGCAAGCGCGGCGGCGGCGGCGGCGGCGGCGGCGGTGTGGT
CGGGCGTGCGGCAGCCGCCGACCAGCCCGCTGCCCCGGCAAACCGCAAGG
AGGAGTCGCACGTCTTGCGGGGGGTGACTGGAGTTGTGTCGCCGGGCCAG
ATCATGGCGATCATGGGT
back to top