mRNA_L-elsbetiae_contig5918.14392.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5918.14392.1 vs. uniprot
Match: A0A6H5JCE5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCE5_9PHAE) HSP 1 Score: 465 bits (1196), Expect = 1.040e-156 Identity = 237/337 (70.33%), Postives = 277/337 (82.20%), Query Frame = 2 Query: 2 PGACHGQQEVTTCEELQAAFELTKTQDVTVQISPAADIECATYTNMTMSSNTLTVSSSEDLERFQATTLLRRVRLEVTGGAKLFWETSVWFDGVEGEDEQNNDGGAVFVGEGSTVRFMNDVEMRDVSIINERMEDSDFASFVRSGGCVWTDGYFRVDGAAVLTRCDITGAGESPPGPGGAVYVGERGSVLFNGGVAITETSITDDFGGEGGAIYNLGKVNIRGNSRFEDLRASSGGAIYNGESAMFNFRRGATAFFRDVSNRDAEGSALFNRGFFKFSGPALFVDAEPPVILTTAGSETILSEDSAFWDTSGAGDEPFFNPDSADFTVPGSVTFVGF 1012 PGACHG + TC++L AAFE T+T+DV V++ P ADIEC T+TNMTM+SN+LTVSSSE+++ F ++ L VRL+VT GAKLFWET+V F+G E E + DGGAV+VGEGSTVRF+NDV+M+D++IINER EDSDF+SFVRSGGCVWT GYFRVDG A T CDI+GAGESPPGPGGAVYVGE GSVLFNGGV IT+T ITDDFGG GG IYNLGKVNI+G+SRFED+ ASSG AIYNGE A FNFR GA AFF+D++NRD+EGSALFNRGFFKFSGPALF DAE PVI+ SETI+SEDSAFW + + D ADFT+P SVTFVGF Sbjct: 96 PGACHGL--IETCDDLLAAFEQTQTEDVVVEMHPFADIECETFTNMTMTSNSLTVSSSENIDNFSGSSSLVNVRLDVTNGAKLFWETNVIFEGDE-ETDLMVDGGAVYVGEGSTVRFLNDVQMQDIAIINERDEDSDFSSFVRSGGCVWTAGYFRVDGEATFTGCDISGAGESPPGPGGAVYVGETGSVLFNGGVTITDTHITDDFGGSGGGIYNLGKVNIKGDSRFEDISASSGVAIYNGEGATFNFRSGARAFFKDLNNRDSEGSALFNRGFFKFSGPALFFDAELPVIVAVDNSETIISEDSAFWTWDESPGDALSVNDGADFTLPDSVTFVGF 429
BLAST of mRNA_L-elsbetiae_contig5918.14392.1 vs. uniprot
Match: D7G1Q9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1Q9_ECTSI) HSP 1 Score: 415 bits (1067), Expect = 7.110e-139 Identity = 223/337 (66.17%), Postives = 251/337 (74.48%), Query Frame = 2 Query: 2 PGACHGQQEVTTCEELQAAFELTKTQDVTVQISPAADIECATYTNMTMSSNTLTVSSSEDLERFQATTLLRRVRLEVTGGAKLFWETSVWFDGVEGEDEQNNDGGAVFVGEGSTVRFMNDVEMRDVSIINERMEDSDFASFVRSGGCVWTDGYFRVDGAAVLTRCDITGAGESPPGPGGAVYVGERGSVLFNGGVAITETSITDDFGGEGGAIYNLGKVNIRGNSRFEDLRASSGGAIYNGESAMFNFRRGATAFFRDVSNRDAEGSALFNRGFFKFSGPALFVDAEPPVILTTAGSETILSEDSAFWDTSGAGDEPFFNPDSADFTVPGSVTFVGF 1012 PG CHG + TC++L AAFE T+T+DV V++ P ADIEC T+TNMTM+SNTLT LFWET+V F+G E E E DGGAV+VGEGSTVRF+NDV+MRDV IINER EDSDFASFVRSGGCVWT GYFRVDG A T CDI GAGESPPGPGGAVYVGE GSVLFN GV ITETSITDDFGG+GG IYNLGKVNI+G+SRFE++ AS+G AIYNGE A FNFR GA AFFRD++NRD+EGSAL N GFFKFSGPA F DAE PVI+ SETILSEDSAFW + + + ADFT+P SVTFVGF Sbjct: 15 PGTCHGL--IETCDDLLAAFEQTQTEDVVVEMHPFADIECDTFTNMTMTSNTLT----------------------------LFWETNVIFEGDE-EAELMVDGGAVYVGEGSTVRFLNDVQMRDVVIINERDEDSDFASFVRSGGCVWTAGYFRVDGEATFTGCDIIGAGESPPGPGGAVYVGETGSVLFNEGVTITETSITDDFGGKGGGIYNLGKVNIKGDSRFEEISASAGVAIYNGEGATFNFRNGAGAFFRDLNNRDSEGSALVNLGFFKFSGPAFFFDAELPVIVAMDNSETILSEDSAFWTWDESPGDALTVNEGADFTLPDSVTFVGF 320
BLAST of mRNA_L-elsbetiae_contig5918.14392.1 vs. uniprot
Match: D7FGT1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGT1_ECTSI) HSP 1 Score: 414 bits (1065), Expect = 3.790e-138 Identity = 221/336 (65.77%), Postives = 257/336 (76.49%), Query Frame = 2 Query: 5 GACHGQQEVTTCEELQAAFELTKTQDVTVQISPAADIECATYTNMTMSSNTLTVSSSEDLERFQATTLLRRVRLEVTGGAKLFWETSVWFDGVEGEDEQNNDGGAVFVGEGSTVRFMNDVEMRDVSIINERMEDSDFASFVRSGGCVWTDGYFRVDGAAVLTRCDITGAGESPPGPGGAVYVGERGSVLFNGGVAITETSITDDFGGEGGAIYNLGKVNIRGNSRFEDLRASSGGAIYNGESAMFNFRRGATAFFRDVSNRDAEGSALFNRGFFKFSGPALFVDAEPPVILTTAGSETILSEDSAFWDTSGAGDEPFFNPDSADFTVPGSVTFVGF 1012 G HG + TCE+LQAAF LT+TQDV +I P DIEC T+TNMTM+SNTLT++SSE+L+ F ++ L VRL VT GA+L WET V F G E E E DGGAVFVGEGSTV F+ND+EM D+ IINER EDSDFASFVRSGGCVWT G F VDG A TRCDITGAGESPPGPGGA+YVG GSV FN GVAI+ET ITDDFGG+GG IYNLG+V I G+SRFED+ ASSG AIYNGE A F F A+AFFRD++NRD+ GS L N G+F+FSGPALFV+A+ PVI+ T S+TILSE+SAFW E ++ADFT+P SV FVGF Sbjct: 16 GVAHGL--IETCEDLQAAFNLTQTQDVIDEIHPFQDIECETFTNMTMTSNTLTLNSSENLDNFFGSSSLTNVRLVVTNGAELIWETHVNFIGDE-EVELMVDGGAVFVGEGSTVHFLNDLEMEDIRIINERDEDSDFASFVRSGGCVWTAGSFIVDGEATFTRCDITGAGESPPGPGGAIYVGATGSVSFNQGVAISETFITDDFGGQGGGIYNLGEVTIAGDSRFEDISASSGVAIYNGEGAEFYFTNDASAFFRDLNNRDSVGSGLTNLGYFEFSGPALFVEADAPVIVATETSQTILSENSAFWTFDEEFGEALSVDEAADFTIPASVVFVGF 348
BLAST of mRNA_L-elsbetiae_contig5918.14392.1 vs. uniprot
Match: D7G0Q4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Q4_ECTSI) HSP 1 Score: 411 bits (1057), Expect = 6.320e-137 Identity = 223/342 (65.20%), Postives = 259/342 (75.73%), Query Frame = 2 Query: 2 PGACHGQQEVTTCEELQAAFELTKTQDVTVQISPAADIECATYTNMTMSSNTLTVSSSEDLERFQATTLLRRVRLEVTGGAKLFWETSVWFDGVEGEDEQNNDGGAVFVGEGSTVRFMNDVEMRDVSIINERMEDSDFASFVRSGGCVWTDGYFRVDGAAVLTRCDITGAGESPPGPGGAVYVGERGSVLFNGGVAITETSITDDFGGEGGAIYNLGKVNIRGNSRFEDLRASSGGAIYNGESAMFNFRRGATAFFRDVSNRDAEGSALFNRGFFKFSGPALFVDAEPPVILTTAGSETILSEDSAFW-----DTSGAGDEPFFNPDSADFTVPGSVTFVGF 1012 PG G + TCE+LQAAFELT+TQDV +IS DIEC +TNMTM+SNTLT++S+EDL +T L VRLEVT GAKL WETSV+F G E E E N +GG VFVGEGSTVRF+NDV++RDV I NER DSD A FVR GGCVWT G+FRVDG A T C I G GESPPG GGAV+V GSVLFN GVAI++T IT+D GG+GG I+NLGKVNI+G+SRFE+L A SG AI+NGE A FNFR GA+AFFRD+SNRD+EGSAL N GFFKFSGP LFVDAE PVI+ T GS TI+S DSAFW D +G E DSA+ ++PGSV+FVGF Sbjct: 15 PGVARGL--IETCEDLQAAFELTQTQDVVDEISTFGDIECPMFTNMTMTSNTLTLNSAEDLSITSGSTSLINVRLEVTNGAKLVWETSVFFLGDE-EVENNVNGGGVFVGEGSTVRFLNDVQIRDVRITNERDGDSDNAVFVRDGGCVWTAGFFRVDGEATFTSCAIIGTGESPPGSGGAVFVDATGSVLFNQGVAISDTFITNDGGGDGGGIFNLGKVNIKGDSRFEELSARSGAAIFNGEDASFNFRNGASAFFRDLSNRDSEGSALVNLGFFKFSGPVLFVDAEAPVIVATEGSTTIISRDSAFWMFENDDVTG---EAISVADSAEVSIPGSVSFVGF 350
BLAST of mRNA_L-elsbetiae_contig5918.14392.1 vs. uniprot
Match: D7G2Y5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Y5_ECTSI) HSP 1 Score: 274 bits (701), Expect = 2.250e-83 Identity = 160/337 (47.48%), Postives = 204/337 (60.53%), Query Frame = 2 Query: 11 CHGQQEVTTCEELQAAFELTKTQDVTVQISPAADIECATYTNMTMSSNTLTVSSSEDLERFQATTLLRRVRLEVTGGAKLFWETSVWFDGVEGEDEQNNDGGAVFVGEGSTVRFMNDVEMRDVSIINERMEDSDFASFVRSGGCVWTDGYFRVDGAAVLTRCDITGAGESPPGPGGAVYVGERGSVLFNGGVAITETSITDDFGGEGGAIYNLGKVNIRGNSRFEDLRASSGGAIYNGESAMFNFRRGATAFFRDVSNRDAEGSALFNRGFFKFSGPALFVDAEPPVILTTAGSETILSEDSAFWDTSGAGDEPF-FNPDSADFTVPGSVTFVGFAE 1018 C GQ E TC++L AF LT +QDV V+I P DI C ++T M+MS+N+LTV + + + L VR EVT GAKL W F G E +D GGAV+VGEGS+ RF + + +V + + E SDFAS+ GGCV+ DGYFRV+G A C+ +G GES PGPGG +YVGE GSVLF G V + + SI DD G GG IYNLGKVNI+GN+ F++LRA +GGAI+NG A F F++GATA F D + D G A+FN G+FK SGPA V+ P + + T LSE S F EP F + T G VTF A+ Sbjct: 20 CQGQLE--TCQDLLDAFALTASQDVVVEIQPGQDITCDSFTTMSMSANSLTVMTPDGQS---GSVGLNEVRFEVTDGAKLLWYPGASFTGTEYQDVN---GGAVYVGEGSSARFYDTLTTSEVGVRSVPEEGSDFASYQLIGGCVYVDGYFRVEGHASFVGCENSGGGESSPGPGGVMYVGETGSVLFAGEVTMQDVSIIDDEGNNGGGIYNLGKVNIKGNAVFQNLRAEAGGAIFNGSGAEFRFKKGATADFIDCLSFDGIGGAVFNAGYFKLSGPAEVVECRAPTFVVGSSGYTRLSEGSVFNGDGSDYPEPIMFVMEGGRLTGVGKVTFDNAAD 348
BLAST of mRNA_L-elsbetiae_contig5918.14392.1 vs. uniprot
Match: A0A6H5JYQ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYQ0_9PHAE) HSP 1 Score: 271 bits (693), Expect = 2.080e-79 Identity = 161/341 (47.21%), Postives = 205/341 (60.12%), Query Frame = 2 Query: 11 CHGQQEVTTCEELQAAFELTKTQDVTVQISPAADIECATYTNMTMSSNTLTVSSSEDLERFQATTLLRRVRLEVTGGAKLFWETSVWFDGVEGEDEQNNDGGAVFVGEGSTVRFMNDVEMRDVSIINERMEDSDFASFVRSGGCV----WTDGYFRVDGAAVLTRCDITGAGESPPGPGGAVYVGERGSVLFNGGVAITETSITDDFGGEGGAIYNLGKVNIRGNSRFEDLRASSGGAIYNGESAMFNFRRGATAFFRDVSNRDAEGSALFNRGFFKFSGPALFVDAEPPVILTTAGSETILSEDSAFWDTSGAGDEPFFNP-DSADFTVPGSVTFVGFAE 1018 C GQ V TC++L AF LT +QDV V+I P DI C +T M+MS+N+LTV++++ + L VR EVT GAKLFW F D Q+ +GGAV+VGEGST RF + + +V + + E SDFAS+ GGCV + DGYFRV+G A C+ +G GES PGPGG +YVGE GSVLF G V + + SI DD G GG IYNLGKVNI+GN+ F++LRA +GGAI+NG A F F++GATA F D + D G A+FN G+FK SGPA V+ P + + T LSE S F EP + T G VTF AE Sbjct: 250 CRGQ--VETCQDLLDAFALTASQDVVVEIQPGQDITCDNFTTMSMSANSLTVTATDGQS---GSVGLNEVRFEVTDGAKLFWHPGASFTET---DYQDVNGGAVYVGEGSTARFYDTLTTSEVGVRSVPEEGSDFASYELIGGCVRAYTYVDGYFRVEGHASFVGCENSGGGESSPGPGGVMYVGETGSVLFAGEVTMQDVSIIDDEGNNGGGIYNLGKVNIKGNALFQNLRAEAGGAIFNGSGAEFRFKKGATADFIDCLSFDGTGGAVFNAGYFKLSGPAEVVECRAPTFVVGSSGYTRLSEGSVFNGDGYEYPEPIILVREGGRLTGVGKVTFDNAAE 582
BLAST of mRNA_L-elsbetiae_contig5918.14392.1 vs. uniprot
Match: D8LG63_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG63_ECTSI) HSP 1 Score: 222 bits (565), Expect = 1.160e-65 Identity = 110/167 (65.87%), Postives = 129/167 (77.25%), Query Frame = 2 Query: 368 MRDVSIINERMEDSDFASFVRSGGCVWTDGYFRVDGAAVLTRCDITGAGESPPGPGGAVYVGERGSVLFNGGVAITETSITDDFGGEGGAIYNLGKVNIRGNSRFEDLRASSGGAIYNGESAMFNFRRGATAFFRDVSNRDAEGSALFNRGFFKFSGPALFVDAEPP 868 MRDV IINE EDSD+AS+ SGGCV T G F V+G A T C+ GAGES PGPGGA++V E GSV F+ GV I ETSITDDFGG+GG IYNLG+VN+ G SRFED+ ASSG A+YNGE A F GATA FRD+SNRD+ GSAL+ G+F+FSGPALFV+A+ P Sbjct: 1 MRDVGIINETDEDSDYASYQHSGGCVRTAGTFTVNGDATFTGCESVGAGESAPGPGGAIFVSETGSVSFSEGVTIMETSITDDFGGQGGGIYNLGEVNVAGGSRFEDISASSGVAVYNGEGAQLRFTNGATACFRDLSNRDSVGSALYYLGYFEFSGPALFVEADTP 167 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5918.14392.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5918.14392.1 >prot_L-elsbetiae_contig5918.14392.1 ID=prot_L-elsbetiae_contig5918.14392.1|Name=mRNA_L-elsbetiae_contig5918.14392.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=298bp MTMSSNTLTVSSSEDLERFQATTLLRRVRLEVTGGAKLFWETSVWFDGVEback to top mRNA from alignment at L-elsbetiae_contig5918:2026..3815+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5918.14392.1 ID=mRNA_L-elsbetiae_contig5918.14392.1|Name=mRNA_L-elsbetiae_contig5918.14392.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1790bp|location=Sequence derived from alignment at L-elsbetiae_contig5918:2026..3815+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5918:2026..3815+ >mRNA_L-elsbetiae_contig5918.14392.1 ID=mRNA_L-elsbetiae_contig5918.14392.1|Name=mRNA_L-elsbetiae_contig5918.14392.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1788bp|location=Sequence derived from alignment at L-elsbetiae_contig5918:2026..3815+ (Laminarionema elsbetiae ELsaHSoW15)back to top |