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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | signal peptide |
| Exons | 2 |
| Model size | 1117 |
| Cds size | 1020 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622816638.8950005-UTR-L-elsbetiae_contig5906:2395..2445 | 1622816638.8950005-UTR-L-elsbetiae_contig5906:2395..2445 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig5906 2396..2445 + |
| 1691683704.088599-UTR-L-elsbetiae_contig5906:2395..2445 | 1691683704.088599-UTR-L-elsbetiae_contig5906:2395..2445 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig5906 2396..2445 + |
| 1622816638.9050205-UTR-L-elsbetiae_contig5906:3567..3614 | 1622816638.9050205-UTR-L-elsbetiae_contig5906:3567..3614 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig5906 3568..3614 + |
| 1691683704.1006699-UTR-L-elsbetiae_contig5906:3567..3614 | 1691683704.1006699-UTR-L-elsbetiae_contig5906:3567..3614 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig5906 3568..3614 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622816638.914071-CDS-L-elsbetiae_contig5906:3614..4634 | 1622816638.914071-CDS-L-elsbetiae_contig5906:3614..4634 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig5906 3615..4634 + |
| 1691683704.1109543-CDS-L-elsbetiae_contig5906:3614..4634 | 1691683704.1109543-CDS-L-elsbetiae_contig5906:3614..4634 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig5906 3615..4634 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5906.14379.1 >prot_L-elsbetiae_contig5906.14379.1 ID=prot_L-elsbetiae_contig5906.14379.1|Name=mRNA_L-elsbetiae_contig5906.14379.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=340bp
MAVKTLRIRITAAEALLLFFGTAIIVQQRADATTSAGCFTDENIKCGADK
ECSECISMELDNQDELIQCATNYQAEGYPCEAFPCCQDEFSPNDCVGNEA
FVNIWLCSFEGGGTSTEGGVCPDELVCPGGSGGDVVDGTDDADGVGGENG
ADDDMSGTNDAGGANSSEDSEGGDGGNGAEDDTSGADDDAVGVGSDDADE
ADGENETGDDMMSGADDDDDAEGGGPSITSSASDDECSADFQTCSGDTEC
AECLTLADTNEVQECTANNLFDGTDVCTHLSIAPCCIDAVSSNGCMGNNA
FTEYYQCRNSQISTAAGQGTCSALTCDDDSVGGVDGGADG back to topmRNA from alignment at L-elsbetiae_contig5906:2396..4634+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig5906.14379.1 ID=mRNA_L-elsbetiae_contig5906.14379.1|Name=mRNA_L-elsbetiae_contig5906.14379.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2239bp|location=Sequence derived from alignment at L-elsbetiae_contig5906:2396..4634+ (Laminarionema elsbetiae ELsaHSoW15)
CCTCTCCCAGAGCGAGGCCGGCAAACGAAAGCTATCGCTGCATCGCAAAG
GTGAGTACAGTTCGCAACCGCGGGGCAGTAACACTATGTAGACTGGATAG
ATATATGCACATAGACTAGTCTTTGTGGTATTATGTACATAGCAGCTGTT
ACATAGATACCCCCGGAGGAACATATCTATTGCTGTCCTACCCATCATCG
CCTCTCCACAAACTGTTACTGCTGCTGTAGATCTTATGCAGTAAGTAAGT
GCTTCATTTGAAGTTGAGCTCCAGGGAAGTTATTCGCTCAAGGATACTTG
TAGCACCGAAAGCGCCTGCTGTGCGAGTAGGAAGAAGACCGCGGTTGTAC
ATGCAACTATTTGTTCCGCACATGTTTGACCGACCGTGCGTTGTCGTGTG
TGTGGTGTGTAGGGAAGAGACGGCTGAACTAGACGGCTGAATTCCTCTCG
CGTTACAATCAAAGGAAATCACCGCAGGAGGGCCCGCATGGGCCTCAGGG
GAGGAACCCTCCTGTGCGACCACGGATAAGAATTGTGGCAAAATGCTCCT
CGAGCACTGATGTACCTGCATAATAAATGAGATCGATCTCGACTCCGTTG
TATATAGTCTAGATAGTCTAGTACGTACCATACATACATACATAATCACA
TACTTTCGCTGCAGGCGAGGTGTAGCTCGGACTGCAGTTTAAAACTGCAC
TGTGTAAGAAACACCGGAACGGCCGAAGGTAGTGGGAAGAATTCAGCCTC
CACCCAACCACCACCAAAAAAGGAAAGGTGGTTGTTTCCAGCGGGTGCCC
TGTACTTCTCGTTTTGCCGCAACTTGATAAAAAACGCGAAACAAGAAAAC
TGTGCGAGCGAACTCTGAAGTTCGAGGTTGAGCTCTGGTATTTTACGGCT
TCCCGCCATAGATAAGCTTTCGAGCATTCTTCCTCCCTTCAACTTCCACG
AACCCCCCGAGCCTGCGCTTGCAGGCATGGTGCTCGCGTACAGGTGCCAG
TGCTGTTGCCGCACGGCAATCAAGGGCTGCGTGGAAGGTGGCGTGTATTA
GCGCCCCATCAAAACGTATCTTAGGTGATCAACCCCGATTCTGAACTGCG
GGTATAGCATCTGCTCAAACACCTTATTTTGTCCACTTTCATTTATTTGG
GTGCTTCTGCTGATGCCTGCAGGAGAAGTATATCGCCGTTGTGAGCTGGC
ACAGGCGTGAGCAGTTGTGATGGCTGTCAAGACGCTTCGAATCAGGATCA
CTGCCGCAGAGGCTCTCCTTCTCTTCTTCGGTACCGCCATCATAGTACAG
CAGCGCGCCGATGCCACCACATCTGCCGGGTGCTTTACTGACGAAAACAT
CAAGTGCGGCGCTGACAAGGAGTGCAGCGAGTGCATTTCAATGGAACTCG
ACAATCAGGACGAGTTAATCCAATGCGCCACCAACTACCAAGCCGAGGGA
TATCCGTGTGAAGCATTCCCCTGCTGCCAAGATGAGTTTTCCCCCAACGA
CTGCGTGGGAAACGAAGCATTCGTGAACATTTGGCTGTGCAGCTTTGAAG
GGGGGGGCACGAGCACGGAAGGTGGAGTATGTCCCGATGAATTGGTTTGC
CCTGGCGGCAGCGGTGGAGACGTCGTCGATGGGACCGACGATGCCGACGG
GGTCGGCGGCGAGAACGGGGCTGACGACGACATGAGTGGCACTAATGATG
CAGGGGGGGCTAACAGTAGCGAGGATTCAGAGGGGGGCGATGGCGGGAAC
GGAGCTGAGGATGACACGAGTGGCGCTGACGATGATGCAGTGGGCGTTGG
CAGTGACGACGCGGACGAAGCCGACGGTGAGAACGAGACGGGCGACGACA
TGATGAGTGGGGCTGATGATGATGACGATGCAGAGGGAGGTGGCCCTTCG
ATCACGTCTTCGGCGTCCGATGATGAGTGCTCTGCGGATTTTCAAACATG
TTCGGGAGACACGGAGTGCGCCGAATGCTTAACTCTAGCCGATACGAACG
AGGTCCAAGAGTGCACGGCCAACAACCTCTTCGACGGTACAGATGTCTGC
ACCCATCTCTCAATAGCCCCCTGCTGCATAGACGCAGTTTCCTCCAATGG
CTGCATGGGAAACAACGCTTTCACGGAGTACTACCAATGCCGCAATAGTC
AAATTTCCACCGCCGCCGGTCAGGGAACATGCAGTGCCTTGACTTGTGAT
GACGATAGTGTTGGAGGAGTAGATGGCGGCGCCGACGGG back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig5906:2396..4634+ >mRNA_L-elsbetiae_contig5906.14379.1 ID=mRNA_L-elsbetiae_contig5906.14379.1|Name=mRNA_L-elsbetiae_contig5906.14379.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2040bp|location=Sequence derived from alignment at L-elsbetiae_contig5906:2396..4634+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGCTGTCAAGACGCTTCGAATCAGGATCACTGCCGCAGAGGCTCTCCT
TCTCTTCTTCGGTACCGCCATCATAGTACAGCAGCGCGCCGATGCCACCA
CATCTGCCGGGTGCTTTACTGACGAAAACATCAAGTGCGGCGCTGACAAG
GAGTGCAGCGAGTGCATTTCAATGGAACTCGACAATCAGGACGAGTTAAT
CCAATGCGCCACCAACTACCAAGCCGAGGGATATCCGTGTGAAGCATTCC
CCTGCTGCCAAGATGAGTTTTCCCCCAACGACTGCGTGGGAAACGAAGCA
TTCGTGAACATTTGGCTGTGCAGCTTTGAAGGGGGGGGCACGAGCACGGA
AGGTGGAGTATGTCCCGATGAATTGGTTTGCCCTGGCGGCAGCGGTGGAG
ACGTCGTCGATGGGACCGACGATGCCGACGGGGTCGGCGGCGAGAACGGG
GCTGACGACGACATGAGTGGCACTAATGATGCAGGGGGGGCTAACAGTAG
CGAGGATTCAGAGGGGGGCGATGGCGGGAACGGAGCTGAGGATGACACGA
GTGGCGCTGACGATGATGCAGTGGGCGTTGGCAGTGACGACGCGGACGAA
GCCGACGGTGAGAACGAGACGGGCGACGACATGATGAGTGGGGCTGATGA
TGATGACGATGCAGAGGGAGGTGGCCCTTCGATCACGTCTTCGGCGTCCG
ATGATGAGTGCTCTGCGGATTTTCAAACATGTTCGGGAGACACGGAGTGC
GCCGAATGCTTAACTCTAGCCGATACGAACGAGGTCCAAGAGTGCACGGC
CAACAACCTCTTCGACGGTACAGATGTCTGCACCCATCTCTCAATAGCCC
CCTGCTGCATAGACGCAGTTTCCTCCAATGGCTGCATGGGAAACAACGCT
TTCACGGAGTACTACCAATGCCGCAATAGTCAAATTTCCACCGCCGCCGG
TCAGGGAACATGCAGTGCCTTGACTTGTGATGACGATAGTGTTGGAGGAG
TAGATGGCGGCGCCGACGGGATGGCTGTCAAGACGCTTCGAATCAGGATC
ACTGCCGCAGAGGCTCTCCTTCTCTTCTTCGGTACCGCCATCATAGTACA
GCAGCGCGCCGATGCCACCACATCTGCCGGGTGCTTTACTGACGAAAACA
TCAAGTGCGGCGCTGACAAGGAGTGCAGCGAGTGCATTTCAATGGAACTC
GACAATCAGGACGAGTTAATCCAATGCGCCACCAACTACCAAGCCGAGGG
ATATCCGTGTGAAGCATTCCCCTGCTGCCAAGATGAGTTTTCCCCCAACG
ACTGCGTGGGAAACGAAGCATTCGTGAACATTTGGCTGTGCAGCTTTGAA
GGGGGGGGCACGAGCACGGAAGGTGGAGTATGTCCCGATGAATTGGTTTG
CCCTGGCGGCAGCGGTGGAGACGTCGTCGATGGGACCGACGATGCCGACG
GGGTCGGCGGCGAGAACGGGGCTGACGACGACATGAGTGGCACTAATGAT
GCAGGGGGGGCTAACAGTAGCGAGGATTCAGAGGGGGGCGATGGCGGGAA
CGGAGCTGAGGATGACACGAGTGGCGCTGACGATGATGCAGTGGGCGTTG
GCAGTGACGACGCGGACGAAGCCGACGGTGAGAACGAGACGGGCGACGAC
ATGATGAGTGGGGCTGATGATGATGACGATGCAGAGGGAGGTGGCCCTTC
GATCACGTCTTCGGCGTCCGATGATGAGTGCTCTGCGGATTTTCAAACAT
GTTCGGGAGACACGGAGTGCGCCGAATGCTTAACTCTAGCCGATACGAAC
GAGGTCCAAGAGTGCACGGCCAACAACCTCTTCGACGGTACAGATGTCTG
CACCCATCTCTCAATAGCCCCCTGCTGCATAGACGCAGTTTCCTCCAATG
GCTGCATGGGAAACAACGCTTTCACGGAGTACTACCAATGCCGCAATAGT
CAAATTTCCACCGCCGCCGGTCAGGGAACATGCAGTGCCTTGACTTGTGA
TGACGATAGTGTTGGAGGAGTAGATGGCGGCGCCGACGGG back to top
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