mRNA_L-elsbetiae_contig5905.14377.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5905.14377.1 vs. uniprot
Match: A0A6H5KXK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXK5_9PHAE) HSP 1 Score: 159 bits (401), Expect = 2.960e-39 Identity = 197/414 (47.58%), Postives = 241/414 (58.21%), Query Frame = 2 Query: 317 DLLAEVLKLDEWTELLKAPLERAVAKGNRSLAQKLVRAGADIGEALHAAAQGGHREIVNDLLENGASAAAKDAKDASIDGYTPL-------------------------------------------------------------------HVAARAGKTEMVQLLLLQGTDKEILSSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAMAGEQLTAEEQGAAEVVDSLLRSGADETILNGEGQAAAEYMEQFVKEQEEEGNQLIEDDVERVRELLANAPADRAWRRRGYLVLCRAHPNRVRQMQDVSSA-YASMAETTPSGANLERAEASGCSGCVEANQMDGLAAVVAMVLGLQE-GIFRTIVGYL 1351 D + E+L + ELL+A LE A AKGN+ LAQ+LVRAGA+IG+ALH A GGHREIV+DLLE+ AS AA D +DG TPL H AA G E+++ ++ G D + + ++ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX + AG Q A QGAAEVV+SLLR+GADETI N +G A + + + V+E++ + +DVERVRELLANAPADRAWRRRGYL++CRA P+RV + + S Y ++A T S A + RA V+ + A VV+ V+ LQE GIFRTIV YL Sbjct: 3 DFIFEILTSQQLAELLRALLEHAAAKGNKDLAQRLVRAGAEIGDALHRAVDGGHREIVSDLLESEASLAATD-----MDGRTPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLRSTQFKCPATHAAALEGHVEILRAIIEHGADVDAVDAQQRTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNSLLTP----LMKAGRQ--AGRQGAAEVVNSLLRAGADETIANVQGNKAVDMIGEDVEEEDR-----LTEDVERVRELLANAPADRAWRRRGYLIMCRAQPDRVPERRMTSGTHYTNVARRTRSRAKMARARGIAGESTVDESTGGNWAVVVSKVISLQEEGIFRTIVEYL 400
BLAST of mRNA_L-elsbetiae_contig5905.14377.1 vs. uniprot
Match: D8LL12_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL12_ECTSI) HSP 1 Score: 104 bits (260), Expect = 1.130e-20 Identity = 60/107 (56.07%), Postives = 75/107 (70.09%), Query Frame = 2 Query: 257 NAMANRDRREALRGAEEETFDLLAEVLKLDEWTELLKAPLERAVAKGNRSLAQKLVRAGADIGEALHAAAQGGHREIVNDLLENGASAAAKDAKDASIDGYTPLHVA 577 NA+AN R AL+GAE ETFDL +EVL W E+L+ PLE A A+GN +L QKL+RAGAD+G ALHAA + GH E+V +LLE+GA + KD + G TPL VA Sbjct: 15 NALANEQGRRALKGAEGETFDLFSEVLTTHGWAEMLQFPLECAAAQGNVALTQKLLRAGADMGSALHAAVRYGHAEVVTNLLEHGACVSIKDTR-----GSTPLQVA 116
BLAST of mRNA_L-elsbetiae_contig5905.14377.1 vs. uniprot
Match: D7FKL4_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKL4_ECTSI) HSP 1 Score: 104 bits (259), Expect = 2.040e-20 Identity = 120/431 (27.84%), Postives = 160/431 (37.12%), Query Frame = 2 Query: 263 MANRDRREALRGAEEETFDLLAEVLKLDEWTELLKAPLERAVAKGNRSLAQKLVRAGADIGEALHAAAQGGHREIVNDLLENGASAAAKDAKDASIDGYTPLH-------------------------------------------------------------------VAARAGKTEMVQLLLLQGTDKEILSSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAMAGEQLTAEEQGAAEVVDSLLRSGADETILNGEGQAAAEYMEQFVKEQEEEGNQLIEDDVERVRELLANAPADRAWRRRGYLVLCRAHPNRVRQMQDVSSAYASMAETTPSGANLERAEASGCSGCVEANQMDGLAAVVAMVLGL-QEGIFRTIVGYL 1351 MAN R ALRG EE FDL AE +W L++ LE A +G+ L +KLV AGA+IG A+HAA +GGH +I LLE+GASA+A D +G TPL + A G + ++ L+ G D + + +A A +QG EVVD LLR GADET + G G AA+ + V E++ I ++ E VR+LLANAPADRAWRRR LVLCRA P++++ +SS D +A + A VLGL +EGIFRTIV ++ Sbjct: 1 MANECARGALRGEEERIFDLAAETCTPKQWAGLMQPFLEHAAGRGHEHLTRKLVEAGAEIGTAVHAAVRGGHCDITEFLLESGASASASDE-----EGLTPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADINRRYGDREISALDIGAGEGHVDFIRTLIEHGADVDATNYGGVAALHHATANNKVEAMDVLLRAGANARSMSESGHTVLHMAAITRTRTEAATLAVLLKHGADVNAQTVGGTSVLEYVATR---AGKQGIVEVVDLLLRWGADETHVAGNGMRAADAIGMKVPEEDR-----IPEEFEGVRKLLANAPADRAWRRRCSLVLCRARPDKMQ----LSS--------------------------------DRIARLEARVLGLVEEGIFRTIVRFI 382
BLAST of mRNA_L-elsbetiae_contig5905.14377.1 vs. uniprot
Match: D7FYD0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYD0_ECTSI) HSP 1 Score: 90.5 bits (223), Expect = 1.210e-15 Identity = 69/155 (44.52%), Postives = 91/155 (58.71%), Query Frame = 2 Query: 902 AEEQGAAEVVDSLLRSGADETILNGEGQAAAEYMEQFVKEQEEEGNQLIEDDVERVRELLANAPADRAWRRRGYLVLCRAHPNRVR-QMQDVSSAYASMAETTPSGANLERAEA--SGCS-GCVEANQMDGLAAVVAMVLGLQE-GIFRTIVGYL 1351 A QG+AE+VD LLR GADET + GQ A+ + + E G+ L+ +V V ELLANAPADRAWRRRG LVLCRA R R + +D ++ T S A L R++A +GC G E D + V+ L+E GIFR++VG+L Sbjct: 272 AGRQGSAELVDLLLRRGADETTPDRNGQQPADRVGHCM----ELGDVLLGHEVVLVHELLANAPADRAWRRRGLLVLCRAWLRRSRLRQEDGGDTRGGLSRRTRSRAKLARSDAVGAGCRRGTPEGGTGDEWRSASKRVVELEEEGIFRSVVGFL 422
BLAST of mRNA_L-elsbetiae_contig5905.14377.1 vs. uniprot
Match: D7G981_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G981_ECTSI) HSP 1 Score: 88.6 bits (218), Expect = 4.240e-15 Identity = 71/158 (44.94%), Postives = 88/158 (55.70%), Query Frame = 2 Query: 899 TAEEQGAAEVVDSLLRSGADETILNGEGQAAAEYMEQFVKEQEEEGNQLIEDDVERVRELLANAPADRAWRRRGYLVLCRAHPNRVRQMQDVSSAYAS-MAETTPSGANL-ERAEASGCSGCVEANQMDGLAA-----VVAMVLGLQEGIFRTIVGYL 1351 +A ++GA EVVD LLR ADET + G + E + + + +V+RV +LL AP DRAWRRRG LVLCRAHP R+ Q+ S S + T S L ER + +G SG E DG A +V VLGL EGIFRTIVGYL Sbjct: 249 SAGDEGAVEVVDLLLRWNADETDDDAYGHTPGNIVGCMTPETD---SMFV--NVQRVWKLLQYAPQDRAWRRRGMLVLCRAHPERLGLRQNASHVQESTVLRVTRSRTKLVEREQVAGGSG--EGAAADGRTAREWSNMVYRVLGLDEGIFRTIVGYL 399
BLAST of mRNA_L-elsbetiae_contig5905.14377.1 vs. uniprot
Match: A0A6H5JMJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMJ6_9PHAE) HSP 1 Score: 82.4 bits (202), Expect = 2.100e-14 Identity = 47/82 (57.32%), Postives = 56/82 (68.29%), Query Frame = 2 Query: 911 QGAAEVVDSLLRSGADETILNGEGQAAAEYMEQFVKEQEEEGNQLIEDDVERVRELLANAPADRAWRRRGYLVLCRAHPNRV 1156 +G EVVDSLLRSGADETIL+ EG+AA + + V G L + +RVR+LL NA ADRAW RR YLVLCR HP+R Sbjct: 98 EGDTEVVDSLLRSGADETILDSEGRAAVDMISWEVA-----GLHLSGEQDDRVRDLLVNAQADRAWHRRRYLVLCRTHPDRA 174
BLAST of mRNA_L-elsbetiae_contig5905.14377.1 vs. uniprot
Match: D7G6X8_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6X8_ECTSI) HSP 1 Score: 83.6 bits (205), Expect = 2.520e-13 Identity = 49/93 (52.69%), Postives = 61/93 (65.59%), Query Frame = 2 Query: 902 AEEQGAAEVVDSLLRSGADETILNGEGQAAAEYMEQFVKEQEEEGNQLIEDDVERVRELLANAPADRAWRRRGYLVLCRAHPNRVRQMQDVSS 1180 A QG +VD LLR GADET LN +G+ AAE + + E L + DVERVR+LL NAP DRAWRRRG+LVLCRA + R+++ SS Sbjct: 216 AGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHI---EYAACPLNKQDVERVRDLLENAPVDRAWRRRGFLVLCRAFWIKARRLRAASS 305
BLAST of mRNA_L-elsbetiae_contig5905.14377.1 vs. uniprot
Match: D7G1U1_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1U1_ECTSI) HSP 1 Score: 82.0 bits (201), Expect = 5.510e-13 Identity = 61/150 (40.67%), Postives = 79/150 (52.67%), Query Frame = 2 Query: 905 EEQGAAEVVDSLLRSGADETILNGEGQAAAEYMEQFVKEQEEEGNQLIEDDVERVRELLANAPADRAWRRRGYLVLCRAHPNRVRQMQDVSSAYASMAETTPSGANLERAEASGCSGCVEANQMDGLAAVVAMVLGLQE-GIFRTIVGYL 1351 + G+A+VVD LLR GADETI++ +G+ AA+ + ++ +D ER R LLA APADRAWRRRG LVLCRAHP+R++ D LA +VA V GL+E G+FRTIV YL Sbjct: 285 QRHGSAQVVDLLLRWGADETIVSKQGETAADSIGT------RRCHRTDPEDDERARSLLARAPADRAWRRRGLLVLCRAHPDRLQLGGD-------------------------------------LAGLVAGVGGLEEVGVFRTIVLYL 391
BLAST of mRNA_L-elsbetiae_contig5905.14377.1 vs. uniprot
Match: A0A6H5KNU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNU3_9PHAE) HSP 1 Score: 81.6 bits (200), Expect = 1.220e-12 Identity = 49/93 (52.69%), Postives = 61/93 (65.59%), Query Frame = 2 Query: 902 AEEQGAAEVVDSLLRSGADETILNGEGQAAAEYMEQFVKEQEEEGNQLIEDDVERVRELLANAPADRAWRRRGYLVLCRAHPNRVRQMQDVSS 1180 A QG +VD LLR GADET LN +G+ AAE + + E L + D+ERVR+LL NAPADRAWRRRG LVLCRA + R+++ SS Sbjct: 265 AGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHI---EYAACPLNKQDLERVRDLLENAPADRAWRRRGLLVLCRAFWIKSRRLRAASS 354
BLAST of mRNA_L-elsbetiae_contig5905.14377.1 vs. uniprot
Match: A0A6H5JHY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY9_9PHAE) HSP 1 Score: 82.4 bits (202), Expect = 1.280e-12 Identity = 70/153 (45.75%), Postives = 87/153 (56.86%), Query Frame = 2 Query: 902 AEEQGAAEVVDSLLRSGADETILNGEGQAAAEYMEQFVKEQEEEGNQLIEDDVERVRELLANAPADRAWRRRGYLVLCRAH--PNRVRQMQDVSSAYAS-MAETTPSGANLERAEASGCSGCVEANQMDGLAAVVAMVLGLQEGIFRTIVGYL 1351 A G AE+VD LLR GADET ++ G AA+ V + EE + L ED V+RVR+LLA APADRAWRRRG+L+L RAH RV+ S A A+ +A+ T S RAE +G V DG+ + M G IF IVGYL Sbjct: 633 AGSPGTAEMVDLLLRRGADETAVSENGHTAAD----MVVLKTEESDSLAED-VDRVRKLLARAPADRAWRRRGFLILSRAHYPGGRVQFGHRTSQAPAAGVAKRTRSSEEPSRAEID-WAGVVSMLMGDGVDPISLMGDGANL-IFEKIVGYL 778 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5905.14377.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5905.14377.1 >prot_L-elsbetiae_contig5905.14377.1 ID=prot_L-elsbetiae_contig5905.14377.1|Name=mRNA_L-elsbetiae_contig5905.14377.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=372bp MKFFMMNAMANRDRREALRGAEEETFDLLAEVLKLDEWTELLKAPLERAVback to top mRNA from alignment at L-elsbetiae_contig5905:1444..4126+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5905.14377.1 ID=mRNA_L-elsbetiae_contig5905.14377.1|Name=mRNA_L-elsbetiae_contig5905.14377.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2683bp|location=Sequence derived from alignment at L-elsbetiae_contig5905:1444..4126+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5905:1444..4126+ >mRNA_L-elsbetiae_contig5905.14377.1 ID=mRNA_L-elsbetiae_contig5905.14377.1|Name=mRNA_L-elsbetiae_contig5905.14377.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2232bp|location=Sequence derived from alignment at L-elsbetiae_contig5905:1444..4126+ (Laminarionema elsbetiae ELsaHSoW15)back to top |