mRNA_L-elsbetiae_contig5904.14376.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5904.14376.1 vs. uniprot
Match: D8LCZ3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCZ3_ECTSI) HSP 1 Score: 720 bits (1858), Expect = 5.130e-245 Identity = 394/549 (71.77%), Postives = 418/549 (76.14%), Query Frame = 1 Query: 1 DPEPEKLEVPPQMLQDVFLAARDVMHNAKSGHHSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRKLPAYARQEDILEAINNNQVVVISGETGCGKTTQVSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAPEKPPYNIVCTQPRRISAIGVAERVAAERGETVGGTVGYQIRLEKRASEHTKLLFVTTGILLRRLQADPQLEGVTHVILDEVHERTVDSDFLIIILRDLALQRKDLTLVLMSATLNADLFSDYFNQAPKLNIPGYTFPVQEGYLEDALELTRTLITPTVNRQGRMKRKPLGREQFGQKMVKISAELPRGHYSPRTIESMAMFDESEVPLDVIVDLVQHIHTREGDGAILIFLSGWEEISAVHDRLEVLPMARGFRLYALHSQMPTSQQRDVFLRPPRGIRKIVIATNIAESSITIDDVVFVIDGGKHKEKSYDPEAKVQSLLPAWVSQASSRQRRGRAGRVQPGRCWHLYPRSKVSEMTEYQLPEIVRTSLESLCLQV 1647 DPEPEKLEVP QML++V+ AA+DV+H G RRKLPAYARQ+DILEAINNNQVVVISGETGCGKTT X + P YNIVCTQPRRISAIGVAERVAAERGE VGGTVGYQIRLE+RASEHTKLLFVTTGILLRRLQADPQLEGVTHVILDEVHERTVDSDFLIIILRDL LQRKDLTLVLMSATLNADLFS+YF+QAPKLNIPGYTFPV+E YLEDALELTRT ITPTVNRQGR+KRKPL REQFGQKM K+ E RG YS RT++SMAMFDESEVPLDVIVDLV+H+H EG+GAILIFLSGWEEISAVHD+LE LP AR +RLYALHSQMPTSQQRDVFLRPPRG+RKIVIATNIAESSITIDDVV+VIDGGKHKEKSYDPEAKVQSLLPAWVSQASS+QRRGRAGRVQPGRCWH+YPRSKVSEM EYQLPEIVRTSLESLCLQV Sbjct: 56 DPEPEKLEVPEQMLKEVYAAAQDVLHAKNDLRGRGSVDEKDGPRARRREVWGGNGSGVSIPPPPSHKGAAYEDIQTS---RRKLPAYARQQDILEAINNNQVVVISGETGCGKTTTGGQQVTLVTHRGSSYGAAVTAGSMLWWHQVPQFLMDQYRYDGDGGDGGXDGGASKP----YNIVCTQPRRISAIGVAERVAAERGEAVGGTVGYQIRLERRASEHTKLLFVTTGILLRRLQADPQLEGVTHVILDEVHERTVDSDFLIIILRDLVLQRKDLTLVLMSATLNADLFSNYFSQAPKLNIPGYTFPVEEYYLEDALELTRTQITPTVNRQGRVKRKPLDREQFGQKMSKL--EHLRGRYSQRTLQSMAMFDESEVPLDVIVDLVRHVHAYEGEGAILIFLSGWEEISAVHDKLEALPEARAWRLYALHSQMPTSQQRDVFLRPPRGVRKIVIATNIAESSITIDDVVYVIDGGKHKEKSYDPEAKVQSLLPAWVSQASSKQRRGRAGRVQPGRCWHVYPRSKVSEMNEYQLPEIVRTSLESLCLQV 595
BLAST of mRNA_L-elsbetiae_contig5904.14376.1 vs. uniprot
Match: D8SXN2_SELML (RNA helicase n=9 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8SXN2_SELML) HSP 1 Score: 413 bits (1061), Expect = 1.030e-130 Identity = 222/471 (47.13%), Postives = 304/471 (64.54%), Query Frame = 1 Query: 241 RRKLPAYARQEDILEAINNNQVVVISGETGCGKTTQVSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAPEKPPYNIVCTQPRRISAIGVAERVAAERGETVGGTVGYQIRLEKRASEHTKLLFVTTGILLRRLQADPQLEGVTHVILDEVHERTVDSDFLIIILRDLALQRKDLTLVLMSATLNADLFSDYFNQAPKLNIPGYTFPVQEGYLEDALELT--RTLITPTVNRQGRMKRKPLGREQFGQKMVKISAELPRGHYSPRTIESMAMFDESEVPLDVIVDLVQHIHTREGDGAILIFLSGWEEISAVHDRLEVLPMARGFRLYALHSQMPTSQQRDVFLRPPRGIRKIVIATNIAESSITIDDVVFVIDGGKHKEKSYDPEAKVQSLLPAWVSQASSRQRRGRAGRVQPGRCWHLYPRSKVSEMTEYQLPEIVRTSLESLCLQV 1647 R+KLPA+ ++++L+A++ NQV+V+SGETGCGKTTQ+ +I+CTQPRRISAI VA RVA ERG+ +G +VGYQIRLE R S+ T+LLF TTG+LLRRL DP LEGV+HVI+DE+HER ++ DFL+++LRDL +R L L+LMSAT+NAD+FS YF APKL+IPG+TFPV+E +LED +E T ++ +R +R ++ + +++ + +S T + + ++ + LD++ +QHI + DGAIL+FL+GW++IS + D+L++ P R L LH MPT QR +F RPP G+RKIV+ATNIAE+SITIDDVV+VID GK KE SYD K+ LLP+W+S+A++ QRRGRAGRVQPG C+HLYP+ M +YQLPEI+RT LESLCLQ+ Sbjct: 149 RKKLPAFKMKDEVLQAVSQNQVLVVSGETGCGKTTQLPQFILEEEINAGRGAAC-------------------------------------------DIICTQPRRISAISVATRVADERGDELGESVGYQIRLEARRSQETRLLFCTTGVLLRRLVQDPLLEGVSHVIVDEIHERGMNEDFLLVVLRDLLPKRPKLRLILMSATINADMFSKYFGNAPKLHIPGFTFPVREFFLEDVVESTGFQSQNNQASSRFSGGRRIEKQKDSLTELFEEVAIQDTYKQFSKSTRKYLECWNPEIIDLDLVEAAIQHICEEKNDGAILVFLTGWDDISKLLDKLKLNPSVRNELLLPLHGSMPTINQRQIFQRPPPGVRKIVLATNIAETSITIDDVVYVIDCGKAKETSYDALNKLACLLPSWISRAAAHQRRGRAGRVQPGICFHLYPKLMYDAMAQYQLPEILRTPLESLCLQI 576
BLAST of mRNA_L-elsbetiae_contig5904.14376.1 vs. uniprot
Match: A0A2G5EEZ5_AQUCA (Uncharacterized protein n=1 Tax=Aquilegia coerulea TaxID=218851 RepID=A0A2G5EEZ5_AQUCA) HSP 1 Score: 403 bits (1035), Expect = 1.220e-128 Identity = 227/473 (47.99%), Postives = 303/473 (64.06%), Query Frame = 1 Query: 241 RRKLPAYARQEDILEAINNNQVVVISGETGCGKTTQVSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAPEKPPYNIVCTQPRRISAIGVAERVAAERGETVGGTVGYQIRLEKRASEHTKLLFVTTGILLRRLQADPQLEGVTHVILDEVHERTVDSDFLIIILRDLALQRKDLTLVLMSATLNADLFSDYFNQAPKLNIPGYTFPVQEGYLEDALELTRTLITPTVNR-QGRMKRKPLGREQFGQKMVKISAELPRGHYSPRTIESMAMFDESEVPLDVIVDLVQHIHTREGDGAILIFLSGWEEISAVHDRLE---VLPMARGFRLYALHSQMPTSQQRDVFLRPPRGIRKIVIATNIAESSITIDDVVFVIDGGKHKEKSYDPEAKVQSLLPAWVSQASSRQRRGRAGRVQPGRCWHLYPRSKVSEMTEYQLPEIVRTSLESLCLQV 1647 R KLPAY + L+A+ +NQVVV+SGETGCGKTTQ+ NI+CTQPRRISAI V+ R+AAERGE++G TVGYQIRLE + S T+LLF TTG+LLR+L DP L GV+H+++DE+HER ++ DFL+IILRDL +R+DL LVLMSAT+NAD+FS YF AP ++IPG+TFPV+E +LED LE T I R Q K+ PL F + V I++ + YS T +S+ + +++ L ++ +++I E DGAIL+FL+GW++I+ + D+++ +L + FR+ LH MPT QR++F RPP +RKIV+ATNIAESSITIDDVV+VID GK KE SYD K+ LLP+W+S+AS+ QRRGRAGRVQPG C+ LYP+ M +YQLPEI+RT L+ LCLQ+ Sbjct: 251 REKLPAYKMKAGFLKAVADNQVVVVSGETGCGKTTQLPQFILEEEISCLRAADC-------------------------------------------NIICTQPRRISAISVSGRIAAERGESIGETVGYQIRLEAKRSAQTRLLFCTTGVLLRQLVQDPNLTGVSHLLVDEIHERGMNEDFLLIILRDLLPRRRDLRLVLMSATINADMFSKYFGNAPTIHIPGFTFPVEEFFLEDVLEKTHYPIESEYERRQSEQKKDPLS-ALFEE--VDINSHYKK--YSKSTRQSLEAWSTTKLDLGLVEAGIEYICRHEKDGAILVFLTGWDDITKLLDKIKENCLLGNSSKFRVLPLHGSMPTINQREIFERPPSNMRKIVLATNIAESSITIDDVVYVIDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGICYRLYPKLIYDAMPQYQLPEILRTPLQELCLQI 675
BLAST of mRNA_L-elsbetiae_contig5904.14376.1 vs. uniprot
Match: A0A833VLU0_9POAL (RNA helicase n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833VLU0_9POAL) HSP 1 Score: 409 bits (1050), Expect = 3.240e-128 Identity = 228/476 (47.90%), Postives = 304/476 (63.87%), Query Frame = 1 Query: 241 RRKLPAYARQEDILEAINNNQVVVISGETGCGKTTQVSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAPEKPPYNIVCTQPRRISAIGVAERVAAERGETVGGTVGYQIRLEKRASEHTKLLFVTTGILLRRLQADPQLEGVTHVILDEVHERTVDSDFLIIILRDLALQRKDLTLVLMSATLNADLFSDYFNQAPKLNIPGYTFPVQEGYLEDALELTRTLITPTVNR-QGRMKRKPLGREQ---FGQKMVKISAELPRGHYSPRTIESMAMFDESEVPLDVIVDLVQHIHTREGDGAILIFLSGWEEISAVHDRLE---VLPMARGFRLYALHSQMPTSQQRDVFLRPPRGIRKIVIATNIAESSITIDDVVFVIDGGKHKEKSYDPEAKVQSLLPAWVSQASSRQRRGRAGRVQPGRCWHLYPRSKVSEMTEYQLPEIVRTSLESLCLQV 1647 R KLPA+ +++ L+A+ +NQVVVISGETGCGKTTQ+ NI+CTQPRRISAI VA R+A+ERGE +G TVGYQIRLE + SE T+LLF TTG+LLRRL +P L GV+H+++DE+HER ++ DFLIIILRDL +R DL L+LMSAT+NADLFS YFN AP ++IPG+TFPVQE +LED LE +R I + +G +RK ++ + ++ + +YS T +S+ + S++ L ++ ++++I EGDGAIL+FL+GW+EIS + D ++ L F + LH MPT QR++F RPP G+RKIV+ATNIAESSIT+DDVV+VID GK KE SYD K+ LLP+W+S+AS+ QRRGRAGRVQPG C+ LYP+ M +YQLPEI+RT L+ LCL + Sbjct: 253 REKLPAFKAKDEFLKAVISNQVVVISGETGCGKTTQLPQFILEEEIENLRGAQC-------------------------------------------NIICTQPRRISAISVAARIASERGEELGETVGYQIRLESKRSELTRLLFCTTGVLLRRLIEEPNLSGVSHLLVDEIHERGMNEDFLIIILRDLLPRRPDLRLILMSATINADLFSKYFNGAPIMHIPGFTFPVQELFLEDILEKSRYKIKSEDDSFRGNSRRKRFSSQKNDPLTEVFEEVDIDTTYQNYSAATRQSLEAWSGSQLDLGLVESMIEYICRNEGDGAILVFLTGWDEISKLFDMMKSNNFLGNPSKFLVLPLHGSMPTVNQREIFDRPPNGMRKIVLATNIAESSITVDDVVYVIDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGVCYRLYPKIIHDSMPQYQLPEILRTPLQELCLNI 685
BLAST of mRNA_L-elsbetiae_contig5904.14376.1 vs. uniprot
Match: A0A4P1RJK4_LUPAN (RNA helicase n=4 Tax=Lupinus TaxID=3869 RepID=A0A4P1RJK4_LUPAN) HSP 1 Score: 408 bits (1049), Expect = 5.280e-128 Identity = 228/477 (47.80%), Postives = 298/477 (62.47%), Query Frame = 1 Query: 241 RRKLPAYARQEDILEAINNNQVVVISGETGCGKTTQVSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAPEKPPYNIVCTQPRRISAIGVAERVAAERGETVGGTVGYQIRLEKRASEHTKLLFVTTGILLRRLQADPQLEGVTHVILDEVHERTVDSDFLIIILRDLALQRKDLTLVLMSATLNADLFSDYFNQAPKLNIPGYTFPVQEGYLEDALELTRTLITPTV-----NRQGRMKRKPLGREQFGQKMVKISAELPRGHYSPRTIESMAMFDESEVPLDVIVDLVQHIHTREGDGAILIFLSGWEEISAVHDRLEV---LPMARGFRLYALHSQMPTSQQRDVFLRPPRGIRKIVIATNIAESSITIDDVVFVIDGGKHKEKSYDPEAKVQSLLPAWVSQASSRQRRGRAGRVQPGRCWHLYPRSKVSEMTEYQLPEIVRTSLESLCLQV 1647 R KLPA+ + + L+A+ NQV+V+SGETGCGKTTQ+ NI+CTQPRRISAI VA RV+AERGE +GGTVGYQIRLE + S+ T+LLF TTG+LLR+L DP+L GV+H+++DE+HER ++ DFLIIILRDL +R DL L+LMSATLNADLFS YF AP ++IPG+TFPV E +LED LE TR +I N + R K++ ++ + I + YS +S+ + S++ L ++ +++I EG GAIL+FL+GW+EIS +HD+L+V L F + LH MPT QR++F RPP RKIV+ATNIAESSITIDDVV+VID GK KE SYD K+ LLP+W+S+AS+ QRRGRAGRVQPG C+ LYP+ M +YQL EI+RT L+ LCL + Sbjct: 260 REKLPAFKMKSEFLKAVQKNQVLVVSGETGCGKTTQLPQFILEEEISCLRGADC-------------------------------------------NIICTQPRRISAISVAARVSAERGENLGGTVGYQIRLETKRSDETRLLFCTTGVLLRKLVQDPELTGVSHLLVDEIHERGMNEDFLIIILRDLLPRRPDLRLILMSATLNADLFSKYFGNAPTIHIPGFTFPVAEHFLEDVLEKTRYIIKSEFDNFEGNSRRRRKQQDSKKDTLTEMFEDIDVDTYYRKYSSGARKSLEAWSGSQIDLGLVEATIEYICRNEGGGAILVFLTGWDEISKLHDKLKVNNFLQDPGKFLILPLHGSMPTVNQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVIDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGVCYRLYPKLIHDAMPQYQLAEILRTPLQELCLHI 693
BLAST of mRNA_L-elsbetiae_contig5904.14376.1 vs. uniprot
Match: UPI00125E169F (DExH-box ATP-dependent RNA helicase DExH1 isoform X1 n=4 Tax=Ipomoea TaxID=4119 RepID=UPI00125E169F) HSP 1 Score: 408 bits (1049), Expect = 6.260e-128 Identity = 229/477 (48.01%), Postives = 304/477 (63.73%), Query Frame = 1 Query: 241 RRKLPAYARQEDILEAINNNQVVVISGETGCGKTTQVSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAPEKPPYNIVCTQPRRISAIGVAERVAAERGETVGGTVGYQIRLEKRASEHTKLLFVTTGILLRRLQADPQLEGVTHVILDEVHERTVDSDFLIIILRDLALQRKDLTLVLMSATLNADLFSDYFNQAPKLNIPGYTFPVQEGYLEDALELTRTLITPTV-NRQGRMKRKPLGREQFGQKMVKISAELP-RGHY---SPRTIESMAMFDESEVPLDVIVDLVQHIHTREGDGAILIFLSGWEEISAVHDRLEV---LPMARGFRLYALHSQMPTSQQRDVFLRPPRGIRKIVIATNIAESSITIDDVVFVIDGGKHKEKSYDPEAKVQSLLPAWVSQASSRQRRGRAGRVQPGRCWHLYPRSKVSEMTEYQLPEIVRTSLESLCLQV 1647 R KLPA+ + + L+A+ +NQV+V+SGETGCGKTTQ+ A+ NI+CTQPRRISAI VA R+++ERGE +G TVGYQIRLE + S T+LLF TTG+LLR+L DP + G+TH+++DE+HER +D DFL+IILRDL +R DL L+LMSAT+NA+LFS YF AP ++IPG T+PV E +LED LE TR I P N QG +R+ +E + ++ ++ HY S T +S+ + S++ L ++ +QHI EGDGAIL+FL+GW++IS + D+++V L R F + LH MPT QR++F RPP +RKIV+ATNIAESSITIDDVV+VID GK KE SYD K+ LLP+W+S+AS+ QRRGRAGRVQPG C+ LYP+ M EYQLPEI+RT L+ LCL + Sbjct: 267 REKLPAFKVKSEFLKAVASNQVLVVSGETGCGKTTQLPQFILEEEI-------------------------------------------ASKRGANCNIICTQPRRISAISVAARISSERGENLGETVGYQIRLESKRSAETRLLFCTTGVLLRQLVRDPYITGITHLLVDEIHERGMDEDFLLIILRDLLPRRPDLRLILMSATINAELFSKYFGNAPTIHIPGLTYPVSELFLEDVLEKTRYRIKPEFDNVQGNSRRRHRQQESKKDPLTELFEDVDIDSHYKGYSMTTRQSLETWSGSQLDLGLVEATIQHICCHEGDGAILVFLTGWDDISKLLDKIKVNNFLGDPRKFLVLPLHGSMPTVNQREIFDRPPPNVRKIVLATNIAESSITIDDVVYVIDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGVCYRLYPKLLHDAMLEYQLPEILRTPLQELCLHI 700
BLAST of mRNA_L-elsbetiae_contig5904.14376.1 vs. uniprot
Match: A0A6T6CK03_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A6T6CK03_9RHOD) HSP 1 Score: 405 bits (1040), Expect = 9.240e-128 Identity = 229/483 (47.41%), Postives = 307/483 (63.56%), Query Frame = 1 Query: 241 RRKLPAYARQEDILEAINNNQVVVISGETGCGKTTQVSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAPEKPPYNIVCTQPRRISAIGVAERVAAERGETVGGTVGYQIRLEKRASEHTKLLFVTTGILLRRLQADPQLEGVTHVILDEVHERTVDSDFLIIILRDLALQ-RKDLTLVLMSATLNADLFSDYFNQAPKLNIPGYTFPVQEGYLEDALELTRTLITPTV-------NRQGRMKRKPLGREQFGQKMVKISAELPRG--HYSPRTIESMAMFD-ESEVPLDVIVDLVQHIHTREGDGAILIFLSGWEEISAVHDRLEVLPMARG---FRLYALHSQMPTSQQRDVFLRPPRGIRKIVIATNIAESSITIDDVVFVIDGGKHKEKSYDPEAKVQSLLPAWVSQASSRQRRGRAGRVQPGRCWHLYPRSKVSEMTEYQLPEIVRTSLESLCLQV 1647 R +LPA++ Q+++LEA+ +QVVVISGETGCGKTTQV I+CTQPRRISA+ VAERVAAERG ++G VGYQIRLE + S+ T+LLF TTGILLRRLQ+DP L GVTHVI+DE+HERT+++DFL+IILRDL K++ ++LMSATLNA +F+ YF+ P ++IPG+T+PV E +LED +E+T + +++ R K K + +++ + L YS T+ES+A E + LD+I +++ HI + DGA+LIFL GW++IS + D+L+ R +++ LHS +PT QR +F RPP GIRKI+++TNIAE+SIT+DDVVFVID GK KEK+YD V LLPA+VS+ASSRQRRGRAGR+QPG C+HL+ + M +YQLPEI+RT LESLCLQV Sbjct: 69 RMRLPAWSHQKEVLEAVRGSQVVVISGETGCGKTTQVPQFILDNTKERSF------------------------------------------------IICTQPRRISAVSVAERVAAERGSSIGAEVGYQIRLESQTSKETRLLFCTTGILLRRLQSDPSLNGVTHVIVDEIHERTLEADFLLIILRDLIRSTNKNVRVILMSATLNAGMFAQYFDDCPTVHIPGFTYPVTEYFLEDIIEMTGFQFRESQGGSFRPRDQRSREKAKQMRNRNPAEEIEHLERSLSVNGKRYSNSTLESLANAAFEDNISLDLIEEILIHIVEKNEDGAVLIFLPGWDDISKLCDKLKNNVRFRDASKYQILPLHSSLPTVNQRQIFERPPPGIRKIIVSTNIAETSITVDDVVFVIDSGKFKEKTYDAATNVSCLLPAFVSKASSRQRRGRAGRIQPGFCFHLFSSIDHANMEDYQLPEILRTPLESLCLQV 503
BLAST of mRNA_L-elsbetiae_contig5904.14376.1 vs. uniprot
Match: A0A0K9PZ40_ZOSMR (RNA helicase n=1 Tax=Zostera marina TaxID=29655 RepID=A0A0K9PZ40_ZOSMR) HSP 1 Score: 407 bits (1046), Expect = 1.800e-127 Identity = 231/477 (48.43%), Postives = 298/477 (62.47%), Query Frame = 1 Query: 241 RRKLPAYARQEDILEAINNNQVVVISGETGCGKTTQVSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAPEKPPYNIVCTQPRRISAIGVAERVAAERGETVGGTVGYQIRLEKRASEHTKLLFVTTGILLRRLQADPQLEGVTHVILDEVHERTVDSDFLIIILRDLALQRKDLTLVLMSATLNADLFSDYFNQAPKLNIPGYTFPVQEGYLEDALELTRTLITPTV-NRQGRMKRKPLGREQFGQKMVKISAELPRGH----YSPRTIESMAMFDESEVPLDVIVDLVQHIHTREGDGAILIFLSGWEEISAVHDRLEV---LPMARGFRLYALHSQMPTSQQRDVFLRPPRGIRKIVIATNIAESSITIDDVVFVIDGGKHKEKSYDPEAKVQSLLPAWVSQASSRQRRGRAGRVQPGRCWHLYPRSKVSEMTEYQLPEIVRTSLESLCLQV 1647 R KLPAY +E+ L A+ NQV+VISGETGCGKTTQ+ NI+CTQPRRISAI VA R+A+ERGE +G TVGYQIRLE + S T+L+F TTG+LLRRL +P L GVTH+++DE+HER ++ DFLIIILRDL R DL L+LMSAT+NAD+FS YF AP ++IPG+TFPV E +LED LE T IT N QG +R+ + ++ E+ + YS T +S+ + S++ L+++ ++HI EG GAIL+FL+GW+EIS + ++L+V L + F L LH MPT QR++F RPP +RKIV+ATNIAESSITIDDVV+VID GK KE SYD K+ LLP+W+S+ASS QRRGRAGRVQPG C+ LYP+ M +YQLPEI+RT L+ LCL + Sbjct: 269 RDKLPAYKLKEEFLNAVGKNQVLVISGETGCGKTTQLPQFILEEEISQLRGANC-------------------------------------------NIICTQPRRISAISVAARIASERGENLGETVGYQIRLESKRSSMTRLIFCTTGVLLRRLVQEPNLGGVTHLLVDEIHERGMNEDFLIIILRDLLPIRPDLRLILMSATINADMFSKYFGDAPTMHIPGFTFPVSELFLEDILEKTHYKITSEFDNFQGNSRRRKQQSFAKSDPLTELFEEVDINNQYKSYSSATRQSLGAWTGSQLDLELVEATIEHICRSEGTGAILVFLTGWDEISKILEKLKVNNFLGNSSKFLLLPLHGSMPTVNQREIFDRPPSNVRKIVLATNIAESSITIDDVVYVIDCGKAKETSYDALNKLACLLPSWISKASSHQRRGRAGRVQPGVCYKLYPKLIHDAMPQYQLPEILRTPLQELCLNI 702
BLAST of mRNA_L-elsbetiae_contig5904.14376.1 vs. uniprot
Match: A0A2R6XFW7_MARPO (RNA helicase n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6XFW7_MARPO) HSP 1 Score: 408 bits (1049), Expect = 1.840e-127 Identity = 229/478 (47.91%), Postives = 306/478 (64.02%), Query Frame = 1 Query: 241 RRKLPAYARQEDILEAINNNQVVVISGETGCGKTTQVSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAPEKPPYNIVCTQPRRISAIGVAERVAAERGETVGGTVGYQIRLEKRASEHTKLLFVTTGILLRRLQADPQLEGVTHVILDEVHERTVDSDFLIIILRDLALQRKDLTLVLMSATLNADLFSDYFNQAPKLNIPGYTFPVQEGYLEDALELTRTLI----TPTVNRQGRMKR-KPLGREQFGQKMVKISAELPRGHYSPRTIESMAMFDESEVPLDVIVDLVQHIHTREGD-GAILIFLSGWEEISAVHDRLEV---LPMARGFRLYALHSQMPTSQQRDVFLRPPRGIRKIVIATNIAESSITIDDVVFVIDGGKHKEKSYDPEAKVQSLLPAWVSQASSRQRRGRAGRVQPGRCWHLYPRSKVSEMTEYQLPEIVRTSLESLCLQV 1647 R KLPA+ +E++L A+ NNQVVV+SGETGCGKTTQ+ NI+CTQPRRISA+ VA RVAAERG+ +G +VGYQIRLE + SE+T+LLF TTG+LLRRL +P+L GV+HV++DE+HER ++ DFL+IILRDL +R DL LVLMSAT+NA+LFS YF AP ++IPG+TFPVQE +LED LE TR + P+ N G+ +R + R+ Q + YS T S+ ++ E+ L ++ ++HI RE + GA+L+FL+GW++IS + ++L+ L A + L LH MPT QR++F PPRG+RKIV+ATNIAE+SITIDDVV+VID GK KE SYD K+ LLP+W+S+AS+ QRRGRAGRV+ G C+HLYP+ EM ++QLPEI+RT L+ LCLQ+ Sbjct: 283 REKLPAFKMKEELLRAVANNQVVVVSGETGCGKTTQLPQFLLEQEVEAGRGSKC-------------------------------------------NIICTQPRRISAMSVAARVAAERGDALGQSVGYQIRLESKRSENTRLLFCTTGVLLRRLVQEPELAGVSHVMVDEIHERGMNEDFLLIILRDLLPRRPDLRLVLMSATINAELFSKYFGNAPMMHIPGFTFPVQELFLEDVLEKTRYRVGADQQPSSNYGGQRRRTQEKKRDPITQAFENADIDAEFRRYSRGTQLSLKAWNGDELDLGLVESTIEHICERESEEGALLVFLTGWDDISKLMEKLKANAALGNASRYLLLPLHGSMPTINQREIFQPPPRGVRKIVLATNIAETSITIDDVVYVIDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVRAGVCYHLYPKLVYDEMLKFQLPEILRTPLQELCLQI 717
BLAST of mRNA_L-elsbetiae_contig5904.14376.1 vs. uniprot
Match: A0A8J5GRP8_ZINOF (RNA helicase n=6 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5GRP8_ZINOF) HSP 1 Score: 403 bits (1036), Expect = 7.220e-127 Identity = 222/478 (46.44%), Postives = 305/478 (63.81%), Query Frame = 1 Query: 241 RRKLPAYARQEDILEAINNNQVVVISGETGCGKTTQVSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAPEKPPYNIVCTQPRRISAIGVAERVAAERGETVGGTVGYQIRLEKRASEHTKLLFVTTGILLRRLQADPQLEGVTHVILDEVHERTVDSDFLIIILRDLALQRKDLTLVLMSATLNADLFSDYFNQAPKLNIPGYTFPVQEGYLEDALELTRTLITPTV-NRQGRMKRKPLGR-----EQFGQKMVKISAELPRGHYSPRTIESMAMFDESEVPLDVIVDLVQHIHTREGDGAILIFLSGWEEISAVHDRLE---VLPMARGFRLYALHSQMPTSQQRDVFLRPPRGIRKIVIATNIAESSITIDDVVFVIDGGKHKEKSYDPEAKVQSLLPAWVSQASSRQRRGRAGRVQPGRCWHLYPRSKVSEMTEYQLPEIVRTSLESLCLQV 1647 R +LPAY +++ L A+ NQV+V+SGETGCGKTTQ+ +I+CTQPRRISAI VA R+A+ER E++G TVGYQIRLE ++S+ T+LLF TTG+LLRRL +P L GV+HV++DE+HER ++ DFLIIILRDL +R DL +VLMSATLNADLFS YF +P ++IPG+TFPV E +LED +E TR ITP N QG +R+ + + + + + ++ +YS T +S+ + +++ L ++ +++I EGDGAIL+FL+GW+EIS + ++++ L + F + LH MPT QR++F RPP+ IR+IV+ATNIAESSITIDDVV+V+D GK KE SYD K+ LLP+W+S+AS+ QRRGRAGRVQPG C+ LYP+ M +YQLPEI+RT L+ LCL + Sbjct: 177 RERLPAYKMKDEFLTAVAENQVLVVSGETGCGKTTQLPQFILEQEIEHLRGADC-------------------------------------------SIICTQPRRISAISVATRIASERDESIGETVGYQIRLEAKSSKLTRLLFCTTGVLLRRLVQEPDLAGVSHVLVDEIHERGINEDFLIIILRDLLPRRPDLRVVLMSATLNADLFSKYFGNSPVIHIPGFTFPVTEFFLEDIIEKTRYKITPEFDNYQGNSRRRRMRQSSAKCDPLSEMFEGVDIDVQYKNYSISTRQSLEAWSSAQLELGLVEATIEYICRNEGDGAILVFLTGWDEISKLLEKIKGNIYLGDSNKFLVLPLHGSMPTVNQREIFDRPPKNIRQIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGVCYRLYPKIIHDAMPQYQLPEILRTPLQELCLNI 611 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5904.14376.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5904.14376.1 >prot_L-elsbetiae_contig5904.14376.1 ID=prot_L-elsbetiae_contig5904.14376.1|Name=mRNA_L-elsbetiae_contig5904.14376.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=549bp DPEPEKLEVPPQMLQDVFLAARDVMHNAKSGHHSGAGGGAADEDGPRARRback to top mRNA from alignment at L-elsbetiae_contig5904:324..11811- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5904.14376.1 ID=mRNA_L-elsbetiae_contig5904.14376.1|Name=mRNA_L-elsbetiae_contig5904.14376.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=11488bp|location=Sequence derived from alignment at L-elsbetiae_contig5904:324..11811- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5904:324..11811- >mRNA_L-elsbetiae_contig5904.14376.1 ID=mRNA_L-elsbetiae_contig5904.14376.1|Name=mRNA_L-elsbetiae_contig5904.14376.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3294bp|location=Sequence derived from alignment at L-elsbetiae_contig5904:324..11811- (Laminarionema elsbetiae ELsaHSoW15)back to top |