mRNA_L-elsbetiae_contig590.14370.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig590.14370.1
Unique NamemRNA_L-elsbetiae_contig590.14370.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig590.14370.1 vs. uniprot
Match: D7FNL0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNL0_ECTSI)

HSP 1 Score: 409 bits (1050), Expect = 5.320e-140
Identity = 201/238 (84.45%), Postives = 220/238 (92.44%), Query Frame = 1 
Query:  334 MYSTKRVNKNIVEGDRFITVGDPYKELRRLPGRWKGKQLQTEGCPANAENGNFAKLKYSSEPFQETERFAKTQPLSKRHLGFGTRDAFKRGEFTAAIRTEQYREMLRQEQRLMNAARDSKAEQEGVERAKAKHASSRTFVEGKQEIEYLYDVGRSLENEFNPNRKHDSFYDFQKFKSKGKRMGPYRTMANDIGDMAWDHRPTAPEFGPIGHIKNFYDRSHLAVAGDEVSVLPPRPRLR 1047
            MYSTKRVNKNIVEG+RFI+VGDPYKELRRLPGRWKGKQ QTEGCPANA+NGNFAKLKYSSEPFQETERF KTQPLSKR+LGFGT+DAFKRGEFTA IRT+QYREMLRQEQRLMNA+R+ K E+E V +AKAKHASSR FVEGK+EI++LYDVGRSL+NEFNP RKHD+FYDFQK  S GKRMGPYRTMA DIG+MAWDHRPTAPEFGPIGHIKNFYDRSHL VAG+E  ++ PR RLR
Sbjct:    1 MYSTKRVNKNIVEGNRFISVGDPYKELRRLPGRWKGKQFQTEGCPANADNGNFAKLKYSSEPFQETERFTKTQPLSKRNLGFGTKDAFKRGEFTATIRTQQYREMLRQEQRLMNASRNVKDEREKVAQAKAKHASSRRFVEGKEEIKHLYDVGRSLQNEFNPYRKHDAFYDFQK--STGKRMGPYRTMAQDIGNMAWDHRPTAPEFGPIGHIKNFYDRSHLEVAGEEAHMVQPRLRLR 236
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BLAST of mRNA_L-elsbetiae_contig590.14370.1 vs. uniprot
Match: A0A836CAI9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAI9_9STRA)

HSP 1 Score: 230 bits (587), Expect = 2.960e-70
Identity = 125/226 (55.31%), Postives = 156/226 (69.03%), Query Frame = 1 
Query:  334 MYSTKRVNKNIVEGDRFITVGDPYKELR-RLPGRWKGKQLQTEGCPANAENGNFAKLKYSSEPFQETERFAKTQPLSKRHLGFGTRDAFKRGEFTAAIRTEQYREMLRQEQRLMNAARDSKAEQEGVERAKAKHASSRTFVEGKQEIEYLYDVGRSLENEFNPNRKHDSFYDFQKFKSKGKRMGPYRTMANDIGDMAWDHRPTAPEFGPIGHIKNFYDRSHLAVAG 1008
            MYSTKRVN  I EG  +I+VGDPY+  +  LPGRWKGK  +    P NAENGNF+KL+Y S  FQE ER++KTQP  K+  GFGT+DAF+RGEFTA IRTEQYR+ LR+EQ +M    D   + E + RA+ K  S+RTF EG  E ++LYDVGR+   +F+P    D FY      ++ +RMG +RTMA DIGD AW H+  +PEFGPI H K F+DRSHL V G
Sbjct:    1 MYSTKRVNDKIAEG--YISVGDPYRGTKDTLPGRWKGKGFKVLQVPVNAENGNFSKLEYKSCAFQEMERYSKTQPDRKK--GFGTKDAFRRGEFTATIRTEQYRDQLRKEQTIMAKFCDPVRDSEIIRRAEEKQRSTRTFCEGLPETDHLYDVGRTQVTKFDPKHSRDRFYTPDI--NRERRMGGFRTMAQDIGDGAWSHKYKSPEFGPIHHTKLFWDRSHLTVEG 220
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BLAST of mRNA_L-elsbetiae_contig590.14370.1 vs. uniprot
Match: D7G5S6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5S6_ECTSI)

HSP 1 Score: 219 bits (557), Expect = 7.550e-66
Identity = 112/214 (52.34%), Postives = 145/214 (67.76%), Query Frame = 1 
Query:  364 IVEGDRFITVGDPYKELRR-LPGRWKGKQLQTEGCPANAENGNFAKLKYSSEPFQETERFAKTQPLSKRHLGFGTRDAFKRGEFTAAIRTEQYREMLRQEQRLMNAARDSKAEQEGVERAKAKHASSRTFVEGKQEIEYLYDVGRSLENEFNPNRKHDSFYDFQKFKSKGKRMGPYRTMANDIGDMAWDHRPTAPEFGPIGHIKNFYDRSHLAV 1002
            +V+G  +I++GD YK  +  LP RWKGK L     P NAENGNF++L+Y SEP+ + E+F+KTQPL KR LGFGT+DAF+ GEFTA IRTEQYR++LR E+ +M   RD   +Q   ++ +   A  R F +G +EIE+LYDVGRS   EF+P    D FY       + KR GPYRTMA DIG  AW H   +PE GPI H+K FYD+SHL++
Sbjct:    1 MVDGGSYISIGDMYKGNKIILPDRWKGKGLSVPQLPKNAENGNFSRLEYRSEPYADMEKFSKTQPLDKRKLGFGTKDAFRPGEFTATIRTEQYRDLLRAEKNIMEKHRDPAKDQAAAQKYEKDCAEHRAFPDGLKEIEHLYDVGRSQVTEFDPKNSRDRFYTLSI--GQEKRRGPYRTMAQDIGSGAWGHTYQSPEHGPIHHVKFFYDKSHLSL 212
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BLAST of mRNA_L-elsbetiae_contig590.14370.1 vs. uniprot
Match: A0A6V1R9I1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1R9I1_HETAK)

HSP 1 Score: 207 bits (527), Expect = 2.860e-61
Identity = 108/225 (48.00%), Postives = 144/225 (64.00%), Query Frame = 1 
Query:  334 MYSTKRVNKNIVEGDRFITVGDPYKELRRLPGRWKGKQLQTEGCPANAENGNFAKLKYSSEPFQETERFAKTQPLSKRHLGFGTRDAFKRGEFTAAIRTEQYREMLRQEQRLMNAARDSKAEQEGVERAKAKHASSRTFVEGKQEIEYLYDVGRSLENEFNPNRKHDSFYDFQKFKSKGKRMGPYRTMANDIGDMAWDHRPTAPEFGPIGHIKNFYDRSHLAVAG 1008
            MY+TKR+NKN ++   +I++ DPY E R+LP RWK KQ      P     G FAK  Y+ +P++E   F K QP   R LGFGT+DA KRGEFTA IRTEQYRE L++EQR+++  RD  AE   +ERA+ K    R+F EG  E   LYD+GR    +F+P +  D+FY  +K   + KR+G ++T A  +G  AWDH  + PEFGPI ++KNFYD+ HL   G
Sbjct:    1 MYATKRINKNKIDVS-YISIQDPYVENRKLPPRWKEKQFAVAHLPNPENGGYFAKKTYAPDPYKEAVHFIKEQPADSRKLGFGTKDASKRGEFTATIRTEQYRETLKKEQRILDHQRDPAAETMTLERAR-KREEERSFPEGLSETRRLYDIGRQNVTDFDPRQSRDTFYTLRK--DRPKRLGHHQTAAAAVGSGAWDHEYSKPEFGPIPYVKNFYDKGHLGTQG 221
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BLAST of mRNA_L-elsbetiae_contig590.14370.1 vs. uniprot
Match: A0A7S2XZN8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZN8_9STRA)

HSP 1 Score: 197 bits (501), Expect = 2.280e-57
Identity = 103/227 (45.37%), Postives = 147/227 (64.76%), Query Frame = 1 
Query:  334 MYSTKRVNKNIVEGDR-FITVGDPYKELRR-LPGRWKGKQLQTEGCPANAENGNFAKLKYSSEPFQETERFAKTQPLSKRHLGFGTRDAFKRGEFTAAIRTEQYREMLRQEQRLMNAARDSKAEQEGVERAKAKHASSRTFVEGKQEIEYLYDVGRSLENEFNPNRKHDSFYDFQKFKSKGKRMGPYRTMANDIGDMAWDHRPTAPEFGPIGHIKNFYDRSHLAVAG 1008
            MY T R +KN+++ D  ++T+GDPY +  R +P RWK KQ   +  PA  ++G F + KY  E ++E E + K+QP  +R  GFG+ DA +RGEFT+ IRTEQYRE L+QE R+    RD ++E++ +  A A+    RTF EG  E  +LYD+G+    EF+P    D+FY  +K   + KR+G + T +  +GD AWDH+ T PEFGPI ++KNFYDRSHL + G
Sbjct:    1 MYRTHRTHKNLLDKDASYVTIGDPYIDPNRTIPPRWKEKQFVVQHKPALKQSGYFEEFKYQPEEYKEMESYLKSQPQDRRKNGFGSHDATRRGEFTSTIRTEQYRETLKQELRVHEKQRDPESERKVMAIA-AEREMGRTFTEGLTETRHLYDIGKKQVTEFDPRSSRDTFYVMRK--DRPKRLGAHTTSSQAVGDGAWDHKYTKPEFGPIPYVKNFYDRSHLQIEG 224
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BLAST of mRNA_L-elsbetiae_contig590.14370.1 vs. uniprot
Match: A0A7S2EF12_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EF12_TRICV)

HSP 1 Score: 182 bits (462), Expect = 2.350e-51
Identity = 102/240 (42.50%), Postives = 149/240 (62.08%), Query Frame = 1 
Query:  334 MYSTKRVNKNIVEG--DRFITVGDPYKE-LRRLPGRWKGKQLQTEGCPANAENGNFAKLKYSSEPFQE-TERFAKTQPLSKRHLGFGTRDAFKRGEFTAAIRTEQYREMLRQEQRLMNAARDSKAEQEGVERAKAKHASSRTFVEGK--QEIEYLYDVGRSLENEFNPNRKHDSFYDFQKF-----KSKG----KRMGPYRTMANDIGDMAWDHRPTAPEFGPIGHIKNFYDRSHLAVAG 1008
            MYSTK ++KNI       + ++GDPY+  +  LP RWK KQ  T  CP NA NG F K +Y+ +P+ E  E+++KTQPL KR LGFG+ DAFK GEFT+   TE+YR ++RQEQ+L+++ RD   E+E +++ + +  ++     GK  +E ++LYDVGR+    ++P    DSFY   K      K KG    +R+G +R M+  IG+ AW H+   PEFG + +I+ FYDR H+   G
Sbjct:    1 MYSTKSIHKNINPNYQQTYTSIGDPYRNSVEELPSRWKKKQFVTPKCPKNAYNGLFVKPQYTPDPYTERAEQYSKTQPLEKRRLGFGSHDAFKPGEFTSDKATERYRNVVRQEQKLLDSVRDEMRERELIQKLRDRPRTTPKDKLGKDLKEPKFLYDVGRTHVTLYSPQSTRDSFYKLPKHAPVDPKLKGLDPIRRLGSHRPMSASIGEQAWRHKYAKPEFGQVKYIEKFYDRGHIECKG 240
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BLAST of mRNA_L-elsbetiae_contig590.14370.1 vs. uniprot
Match: A0A7S2CP23_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CP23_9STRA)

HSP 1 Score: 172 bits (436), Expect = 1.570e-47
Identity = 105/242 (43.39%), Postives = 140/242 (57.85%), Query Frame = 1 
Query:  334 MYSTKRV-NKNIVE------GDRFITVGDPYKE-LRRLPGRWKGKQLQTEGCPANAENGNFA----KLKYSSEPFQETERFAKTQPLSKRHLGFGTRDAFKRGEFTAAIRTEQYREMLRQEQRLMNAARDSKAEQEGVERAKAKHASSRTFVEGKQEIEYLYDVGRSLENEFNPNRKHDSFYDFQKFKSK-----GKRMGPYRTMANDIGDMAWDHRPTAPEFGPIGHIKNFYDRSHLAVAG 1008
            MYSTK   NKN VE       D++I++GDPY + + +LP RWK  Q Q +  P NA NG F        Y+S+P++ET  +   QP  KR +GFGT+DA KR EF A IRTEQYRE L++E  +++  RD   E+E     K ++  S  FV G  E EYLYD+GR+    FNP    D FY  +  K         R+GPY T ++ IG  AW+   + P+FG +   KNF D+SHL+VAG
Sbjct:    1 MYSTKIASNKNAVEMGDTKPHDKYISIGDPYVDRVGKLPERWKKPQFQIDRMPKNAGNGYFGYNNKDFTYASDPYKETRSYKAEQPPEKRTMGFGTKDASKRDEFAATIRTEQYRETLKRENTILDEQRDR--EKEAALMEKLRNTKSE-FVPGLTETEYLYDIGRTQSTPFNPKSAGDRFYQRRLNKDLDPKQGSMRLGPYMTSSSQIGTGAWETPYSKPQFGTVSPTKNFNDKSHLSVAG 239
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BLAST of mRNA_L-elsbetiae_contig590.14370.1 vs. uniprot
Match: A0A8J2SVQ1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SVQ1_9STRA)

HSP 1 Score: 154 bits (389), Expect = 2.670e-40
Identity = 95/236 (40.25%), Postives = 133/236 (56.36%), Query Frame = 1 
Query:  334 MYSTKRVNKNI-VEGDRFITVGDPY-KELRRLPGRWKGKQLQTEGCPANAENGNFAKL----KYSSEPFQETERFAKTQPLSKRHLGFGTRDAFKRGEFTAAIRTEQYREMLRQEQRLMNA---ARDSKAEQEGVERAKAKHASSRTFVEGKQEI------EYLYDVGRSLENEFNPNRKHDSFYDFQKFKSKGKRMGPYRTMANDIGDMAWDHRPTAPEFGPIGHIKNFYDRSHL 996
            MY+ K  +  +  E  R+I++GDPY  E  RLP RWK KQ+ T   P NA NG F  +     Y  + + E   +AKTQP   R LGFGT DA KR EFT  +RTEQYR++L++E+R++      R   AEQ  + +A  K A +    E ++E+       +LYD+GRS E +F+P  K D FY+  + + +  R G YR+M+ DIGD AWD +     FG       FY +SH+
Sbjct:   30 MYADKFTHPRLQCEAGRYISIGDPYVDEAERLPARWKEKQMGTTMYPKNAGNGYFGNMGKPFMYMPDKYVEQLPYAKTQPYDTRKLGFGTHDASKRDEFTDRVRTEQYRDLLKREKRILQRNEQKRGGLAEQ--IRKAHKKLAEAAVEEERQREVCGLSAAPFLYDIGRSRETQFDPKTKTDCFYNAYQARKREMRRGGYRSMSQDIGDGAWDLQQKRETFGRSHATAAFYSKSHI 263
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BLAST of mRNA_L-elsbetiae_contig590.14370.1 vs. uniprot
Match: A0A482RVI8_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RVI8_9ARCH)

HSP 1 Score: 142 bits (357), Expect = 4.910e-36
Identity = 92/233 (39.48%), Postives = 136/233 (58.37%), Query Frame = 1 
Query:  334 MYSTKRVNKNIVEGDRFITVGDPYKELRRLPGRW--KGKQL---QTEGCPANAENGNFAKLKYSSEPFQETERFAKTQPLSKRHLGFGTRDAFKRGEFTAAIRTEQYREMLRQEQRLMNAARDSKAEQEGV--ERAKAKHAS----SRTFVEGKQEIEYLYDVGRSLENEFNPNRKHDSFYDFQKFKSKGKRMGPY-RTMANDIGDMAWDHRPTAPEFGPIGHIKNFYDRSHL 996
            MYS+K V+K++V  + +ITVGDPY + +  P R   KG++L   Q++G P NAE G F K  Y  E ++E  ++  TQPL +R LGFGT+DA KR EF++  RTEQYRE LR+E+ +  +    K +   +  ERA    A+    + T   G + I   YD+GR+   +FNP    D FY F +    G+  G   + ++ ++G  AW+ +   P FG  G +KNF+D+SHL
Sbjct:    1 MYSSKLVHKSMVANNAYITVGDPYHDPKANPFRQGKKGEKLTPFQSKGIPQNAELGYFTKKSYVPEGYKEGIKYITTQPLDQRKLGFGTKDAHKRDEFSSNNRTEQYRETLRKEKEMAESPEVVKEKLTKLLAERATMDFATQTRYTNTLSGGPKRIRQ-YDIGRTQVTDFNPKATRDKFYRFDE--EHGRYFGDLAQPISCEVGAAAWETQYRPPAFGGKGEVKNFFDKSHL 230
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BLAST of mRNA_L-elsbetiae_contig590.14370.1 vs. uniprot
Match: H3HED5_PHYRM (Uncharacterized protein n=19 Tax=Phytophthora TaxID=4783 RepID=H3HED5_PHYRM)

HSP 1 Score: 136 bits (343), Expect = 3.760e-34
Identity = 95/231 (41.13%), Postives = 131/231 (56.71%), Query Frame = 1 
Query:  334 MYSTKRVNKNIVEGDRFITVGDPYKELRRLPG---RWKGKQLQTEGCPA-NAENGN--FAKLKYSSEPFQETERFAKTQPLSKRHLGFGTRDAFKRGEFTAAIRTEQYREMLRQEQRLMNAARDSKAEQEGVERAKAKHASSRTFVEGKQEIEYLYDVGRSLENEFNPNRKHDSFYDFQKFKSKGKRM-GPYRTMANDIGDMAWDHRPTAPEFGPIG-HIKNFYDRSHLAV 1002
            MYSTK +NKNI +   ++T+GDPY++   + G   R KGKQ+ T   PA N  NG+  F K  YSS+P Q+   + K+QP+  R  GFG++DA +R EF + IRTEQYRE L  E ++++  + +  +  G+  A      S TF EG QE ++LYD+GRS   EFN     D+FY  +   S+ KR  GP+   +  IG  A D     P   P G   K FYD SHL +
Sbjct:    1 MYSTKVLNKNIAQS--YLTIGDPYRDPHLIEGKNSRHKGKQVLT--VPAKNTCNGSGYFDKKTYSSDPLQDNTAYLKSQPMDSRKSGFGSKDASRRDEFMSHIRTEQYRETLHTEVKILDKQKQN--DPPGLFDALDSLNQSHTFPEGLQETKHLYDIGRSQNTEFNQKSHRDTFYTMRVGNSQYKRNNGPFMLTSESIGLGADDVTGNRPN--PKGASTKQFYDHSHLHI 223
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig590.14370.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
D7FNL0_ECTSI5.320e-14084.45Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CAI9_9STRA2.960e-7055.31Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7G5S6_ECTSI7.550e-6652.34Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6V1R9I1_HETAK2.860e-6148.00Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2XZN8_9STRA2.280e-5745.37Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2EF12_TRICV2.350e-5142.50Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S2CP23_9STRA1.570e-4743.39Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A8J2SVQ1_9STRA2.670e-4040.25Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A482RVI8_9ARCH4.910e-3639.48Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
H3HED5_PHYRM3.760e-3441.13Uncharacterized protein n=19 Tax=Phytophthora TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig590contigL-elsbetiae_contig590:22121..28060 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score412.9
Seed ortholog evalue1e-112
Seed eggNOG ortholog2880.D7FNL0
Hectar predicted targeting categoryother localisation
EggNOG OGs290NK@1,2S4NB@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-01_005080.1
Exons8
Model size1304
Cds size717
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig590.14370.1prot_L-elsbetiae_contig590.14370.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig590 22375..26889 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816637.9612536-UTR-L-elsbetiae_contig590:22120..223741622816637.9612536-UTR-L-elsbetiae_contig590:22120..22374Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig590 22121..22374 -
1691683703.349632-UTR-L-elsbetiae_contig590:22120..223741691683703.349632-UTR-L-elsbetiae_contig590:22120..22374Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig590 22121..22374 -
1622816638.0691915-UTR-L-elsbetiae_contig590:26889..270321622816638.0691915-UTR-L-elsbetiae_contig590:26889..27032Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig590 26890..27032 -
1691683703.439568-UTR-L-elsbetiae_contig590:26889..270321691683703.439568-UTR-L-elsbetiae_contig590:26889..27032Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig590 26890..27032 -
1622816638.0818517-UTR-L-elsbetiae_contig590:27870..280601622816638.0818517-UTR-L-elsbetiae_contig590:27870..28060Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig590 27871..28060 -
1691683703.4488885-UTR-L-elsbetiae_contig590:27870..280601691683703.4488885-UTR-L-elsbetiae_contig590:27870..28060Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig590 27871..28060 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816637.9713757-CDS-L-elsbetiae_contig590:22374..225691622816637.9713757-CDS-L-elsbetiae_contig590:22374..22569Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig590 22375..22569 -
1691683703.361024-CDS-L-elsbetiae_contig590:22374..225691691683703.361024-CDS-L-elsbetiae_contig590:22374..22569Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig590 22375..22569 -
1622816637.9828832-CDS-L-elsbetiae_contig590:23328..234901622816637.9828832-CDS-L-elsbetiae_contig590:23328..23490Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig590 23329..23490 -
1691683703.37047-CDS-L-elsbetiae_contig590:23328..234901691683703.37047-CDS-L-elsbetiae_contig590:23328..23490Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig590 23329..23490 -
1622816637.9974265-CDS-L-elsbetiae_contig590:24343..243951622816637.9974265-CDS-L-elsbetiae_contig590:24343..24395Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig590 24344..24395 -
1691683703.3798196-CDS-L-elsbetiae_contig590:24343..243951691683703.3798196-CDS-L-elsbetiae_contig590:24343..24395Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig590 24344..24395 -
1622816638.0089543-CDS-L-elsbetiae_contig590:25083..251991622816638.0089543-CDS-L-elsbetiae_contig590:25083..25199Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig590 25084..25199 -
1691683703.392701-CDS-L-elsbetiae_contig590:25083..251991691683703.392701-CDS-L-elsbetiae_contig590:25083..25199Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig590 25084..25199 -
1622816638.0239923-CDS-L-elsbetiae_contig590:25653..257141622816638.0239923-CDS-L-elsbetiae_contig590:25653..25714Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig590 25654..25714 -
1691683703.4059577-CDS-L-elsbetiae_contig590:25653..257141691683703.4059577-CDS-L-elsbetiae_contig590:25653..25714Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig590 25654..25714 -
1622816638.0409243-CDS-L-elsbetiae_contig590:26103..261871622816638.0409243-CDS-L-elsbetiae_contig590:26103..26187Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig590 26104..26187 -
1691683703.418641-CDS-L-elsbetiae_contig590:26103..261871691683703.418641-CDS-L-elsbetiae_contig590:26103..26187Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig590 26104..26187 -
1622816638.0554469-CDS-L-elsbetiae_contig590:26842..268891622816638.0554469-CDS-L-elsbetiae_contig590:26842..26889Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig590 26843..26889 -
1691683703.4290094-CDS-L-elsbetiae_contig590:26842..268891691683703.4290094-CDS-L-elsbetiae_contig590:26842..26889Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig590 26843..26889 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig590.14370.1

>prot_L-elsbetiae_contig590.14370.1 ID=prot_L-elsbetiae_contig590.14370.1|Name=mRNA_L-elsbetiae_contig590.14370.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=239bp
MYSTKRVNKNIVEGDRFITVGDPYKELRRLPGRWKGKQLQTEGCPANAEN
GNFAKLKYSSEPFQETERFAKTQPLSKRHLGFGTRDAFKRGEFTAAIRTE
QYREMLRQEQRLMNAARDSKAEQEGVERAKAKHASSRTFVEGKQEIEYLY
DVGRSLENEFNPNRKHDSFYDFQKFKSKGKRMGPYRTMANDIGDMAWDHR
PTAPEFGPIGHIKNFYDRSHLAVAGDEVSVLPPRPRLR*
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mRNA from alignment at L-elsbetiae_contig590:22121..28060-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig590.14370.1 ID=mRNA_L-elsbetiae_contig590.14370.1|Name=mRNA_L-elsbetiae_contig590.14370.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5940bp|location=Sequence derived from alignment at L-elsbetiae_contig590:22121..28060- (Laminarionema elsbetiae ELsaHSoW15)
GGCAACCTCGCGCCTGTTGTCTTTCTCGCCTGAACACAGACAGGAGAGAC
AGGACGAAGACAAACGCAGTGGTTCCTCGCCTCTTCTTCACCGTGCCCCC
CAACGAGCTCCACTGGGTGGTGTGGGTGTCGGTGTGGGCTGCACTACTGC
TTGCGTCAGTGCGACGGGCTGCGTCGAGCACACTTTCAAGGTGAACAATT
GAGGCGCGCCGAACACTTCATGTCATGTGCATATAAGAAGCAGAGCCGGC
GCGATGTGATTTATGCGCAACACCTGTTTTGACTGCGTCGAAGATACGGG
GTTGGGGGTCGTCATATCTAGACTATATCTAGAATATGTATCTATCTATG
TGAGGATGGCACACACCACCACACGGACGGCCGCTGCCCTTAGATACATG
AAGAGATTGAGACCAGTCAAAAGAGAAAGTCTCGTCCTAAAACTATGTGC
ACAGGATCAGAGGAAATGAGCTCAATGCTTAGACTCTGTCTAGACTATCC
TAGACTACCTATTTAGACTATCTAGACTATCTAACTCAGACTATCTAGAC
TATCTAACTCATATGTAGTAACTATGTAGACCTAGCTAGACTCGTAGACT
ACATACATAGATAGATAGATGACCAAAGCCAGTATTCACATAGAATGGAG
TAGACTACCATGCACGTAATCTACATAATATATCTATGTTATGATAGATA
TTCAGATATGCAATCTGCTAGTAGTGCGTTTCGTATCTCCCATTTCCTGC
TTGACAAATGCTGAGTGCCAACGCTAATCCGACACGCGGTACCTTCGCCT
CGCATGGACGTACTCTCAGCGTGCTAAGTGGGCGCCCAAACTCACGAGCT
CGAACTTTACGTTGGCGAAGGGCGCCCACCAAAAGTCGCGGCCGCGCGGA
AGGGTGAACCGACCGCCTGCCGACGCTTATTTTACACCACCACTTTATCG
CCACAGAACCACATTATTGATGAAATATTGACTCTCACTGCTGTATCTAG
TGCCAACCACTTCTTCGTCGTCGCGCAGGCCGACATCTGGTCCCAAACGG
AGTGTCTTCGCTGGAGAAAAGGAAAGATAGGACGTCACCCCACTTCTTAC
AAGCGGTGTGAAAACTAGCAACGTCCTACGGCACCGAGTAGAGAGATTGT
TTTCTCACGGTGCAGCGAACGATGTACAGCACAAAACGCGTCAACAAGAA
CATCGTCGAGGGTGACAGGTGAAGTTTTTTTGTTATGCGGGTTGGGTTGG
GTTGGGTTGGGTTGTGCTGGGTTGGGTTGTGTTGGGTGGGGTTGGATGGC
GGGGCCTTGGGGCCGCGGCTGGTTGAGTTGGCTTGGCTTAGGATTGGGTG
GTATAGTTGGGTGGGTGGGTGGGTGGGTCAGCTACTGCAGGTATTGAGCT
CGCACGACTCATTAATTAACAAACACGTACAAAGTAGTAAAAATAGGTTC
TGCTGTGCAACCGCGGAACACCCATACCCCAATGACCCGAAATCTCTGGG
ACGCCGGGTATCTTCTTCTGGGAGCTCCCGGCGACATAAAATACAGCGTT
ATAAAGTCGGTGGCCGGGTAAATAGAACAACAAGGGCGAGGCCCTGCGCG
TAAATAAGTCGAAAAACAACAGATTTCAAGTCTGGGGTATATGGCATTCG
GCATTGAGTAGCCTCGAGGGCGGAGGGGCAGCGAGGGGGCGAACGGAAAC
TCCCGATTCGTGAGCGGGACATATATACTATATGCGGTTACTTTCATTGT
CGATAGAAAATTGGACTGGGACGAAGGATAGGAGGGTAGCCAAACAAACC
GTGAAAATACAAAATGCAAGGAATGTTCCCGTGCTTTTCGACGTTGCTTG
CCCCCTTGGTTGGCCTCCAACAGGTTCATCACCGTAGGGGATCCTTACAA
AGAGCTCAGGAGACTGCCAGGCCGCTGGAAGGGCAAGCAGCTCCAAACCG
AGGGTTGGTGAGTGAAATGTACAGCCACAAGGTGCTTTTTCGTTATTCCT
CTCCCCTTTGTCCCGTTTCCGTCTCCTCTCCTGTAGTTTTTACCAGCAAA
GAGAGGAGGCCATCCGGGAAGGGCACTTTATCGTCCTATGCACGGAAAAA
TACAAAAAGTACGTATTTGCCAGGTACGTAAGTACAGACATAGCCGTCGA
CTATTCGACAATTGCTTGATGCGGAGACAACACTCGAGGGCGGCAGTTGT
TAGTCAAGAGAGGCCCCGCCTGCTGTGGTTTTCGTGTTTGGGGCTGCTAC
TTCTGTAGGGCAGGCCGATTGGGCGCATCCTCTCGTTCTCACCCTTCTTC
TTCTCCTCCCTGCTCTTGGTTCTCCTCTCGGGTGCACAACACCCAGCCCT
GCGAACGCGGAAAATGGCAACTTCGCCAAGCTCAAGTACTCCTCAGAGCC
GTTTCAGGTGCACATATAAAGAGCCAAACAGAGTGTTAGAGACGCCGCAG
AAGTTGACCCATGTTGGCAGAGAGGGGGGGGCACTGCACCTCTCCCAAGG
TAACCGGTATGTCTCCAAATAGGTTCCTCAGGCGCACGTGGTAGCTTTAC
TGCAGACCAGGGGGATTTAGAGAACGCGACCCTGCAATCTTGTACTGTAC
CAGATAAAAAGGCCACTACGGAGGAGTGTTCCATGAGGTGCAGTAGCAAT
TATGCGCTGCATGGCGTGGTGCACCTAGAGGGGCCTACCTACCTGCAGGC
GGCCACGCCCGTTCCAAATTGGGTAAAAATCTCCATGGTCGTGCCTCTGC
CATGGCTCTGCATATATTTTCATCTGGGCACTCTCACGTGAAGTACACAC
CGCCTGTCGATATTGTACGGTGCCGTAATTGGACCGTTGTCTCGCGTTGC
AATGAACTCAGGAGACAGAGCGGTTCGCCAAGACGCAACCGCTCAGCAAG
CGACACTTGGGGTTCGGCACCAGGGATGCTTTCAAGAGGGGGGAGTTTAC
GGCCGCCATTCGAACGGAACAGTACCGGTGAGCTAAGCCGCGCAAGCCGT
CGTTGCCAGCCGGATGTTTTACGACCAATCAACAACGAACGGTGGCACTT
CGTGATGGAAGCTGGACGAAGCGATTGGGCCCTGCATTTTGCGCTGGCTG
GTAGAAAGATAGGAGTAGTACTTTTCTGGGGTTCGAGTGCGAAGCGTGCT
ACAGCAGTGATTCGAGGCGCCATTGGGGGGGGGGGGGGGGGGGGCGGAAA
CGGAAATTGTTGTGCCGTACGCAGCGGTTCCGACGAAGCGCAAAAAACGA
ATGAATTAGATTCATAATAGAGTGTCCCCTTTCATTGACAACTCTTCTAA
ATGCTACTTGAATAATCTTCTTCTGGCCTGTGTTGTGCAGACACTCAACG
TGCCGGTTACTACTTGCTTTGAATGCGCGCGCAACATAGGCTAGTACTAG
TACTAATACTCTTGGTGTCACCCCTGGCCTCAATGAAACGCACCTTTTCT
CTGCCTCTTGTACCTTGAGCTCTTATCTGTGAGTACCATGCGTTGCGAGT
GTGATGTGCACGCACCTTTATTGCTAACAATAAGGTTTGTAGCAAAAGTA
GCTATTCTAAGAATGTCCCATGTTATTTAAGAACGCGTCGTCTCCTTTTT
TGTTTCCGGTCTTTCCTTCGTTTTTCTTACATTCGTCCTTGAACCAAACG
ATGGTTGGTAACCAGGGAGATGCTGCGGCAGGAGCAGCGGTTGATGAACG
CAGCGCGGGACTCAAAGGTGAATGAACAGAAGAGCAATCATGCGACGGAG
GCTTACAATCAAAAGAGCTGTCCGTTTAAACACAGTCGTCGTCGGAAACC
GGAACAAAACTGCCCGAGGAACGAAAAGACAAATACGTTTAGGTTTGTGC
CGAGGATGTCCACTATTAAAAAAAATCAGGCCACGCGGGATAATAGCTTT
TGATGGGTTCTGGTCTGGGGGAGGCACGCAGTTCTTATTCGTACACATAC
CAAGCTTCCGGATCAGAATTCCCCCACCCGTGGCGCCAACGCGGGTTGAT
AGTTAGTCTTGCACGATTAGTCTAGCCTTGAAAGGTAAAAATTAGGGCAA
AACACCCCCAATGTCACACTCCCAATGTCTTGTCGACTGGGAGAGGTGAT
TGGATACGCGCCTTCAAATCCTTTTTAGACTCCAAGATGGGCGTCTGTCT
CACACCGATCGATTTCCAAACGAGCTGCTTGCTGTCTCGAACTTCTTCGC
CGCTTATTTGCCGCTGAACCAGTCCGCTGTCGAGATCCACCATGCTGGGT
AGAAGCAATTGCGTGCATGACACCAGTCAGTGTGACAGCAACAACAGCAG
CAGTGGTTTTCTGCGCGCTCCGTGCGCGGAAACAGGCGAGCATGGCAACG
GCGTCGGCGTCTCCTGCAACGTTATTTTCGTGGCTGACACAACGTACGAA
GCCTACATGGGAGATAACCCTCACTCCTGCCTCGCTGCCCAAGCTTCCCC
GCATTTTGGGTCAAATAAAAAGATATGGACTGAACTGTAGGCTATTCAGC
TACATATCTTTCAAAACGCATGTACAACAAAGGACCTCGCACCAATGACG
CACTGATCCGAAACCGACAGGCTGAGCAAGAGGGGGTAGAGCGAGCCAAA
GCCAAGCATGCCTCCTCGAGAACGTTCGTGGAAGGCAAACAGGAGATCGA
GTACCTCTACGACGTCGGCCGGTCGCTCGAGAACGAGTTCAACCCTAACC
GAAAACATGACTCGTTTTACGACTTTCAAAAGGTGACCGTCTATACTGTA
TTTCGTGAAAATAGTATGCTTCGTACATAAAAATGGTGCAAAGTTTTTTT
TTACGGTATAGTCTAGCCTATGGATATATGAAGAAACAAAGCGTTGAGAT
GGAAAAACAACGGAGCTTGCAACCCTTGCCTGTCCGGTTGAGCTTAGCCA
GAGAGAAGTTGCCTGCGCTTGTAGCCGTAGTTAGTTACTTCACGAAAACA
CGGTGCGTAGAGGGGGGTTGCCGCTTGAATGAAAGAGCGAGTTTGTTGAG
GGGGGGGCGCCCTTCAGAACCTGTTTCCGTCGGTGGGCAAAATATGGTGC
CCTCGCTTCTTGGTAAAGTTACCCTCTCGGATTCGCAGACGGCAAACAAA
CGAGGAAAGAACTTGGCGCCGCCTACATAGGATCACTAGTCGCGGCGCGG
CGTTTTGCGCTCGTTTGCTGTGGTTGTAGTCCAACGTAACCAGCTGCTTA
CTCTATCCTTCCTGCTTCTCTCTGAATGCGCCCATGCTACAATAGTAGGA
GGCCGGAACCTTTGAATTCATACAAGAAGAGGCATCCCCACCACACACCA
CCACACACCACCAACGACAGCTACCCACATGTTGACCTTTGTACACATTG
CTGCTGCCGCCGTCTCCGACGCCCCTCTCTCTCTGTGTGTATCATCTATC
TCTTTCTATCCCCCCCCCCCACCTATCTGTATGCGCATGTGGGTGCACCC
ACACAAAAAAACATGGAAACGACGAATCTAACAACGAGCAGTTCAAGTCC
AAGGGGAAGAGGATGGGCCCCTACCGTACCATGGCTAACGACATCGGGGA
CATGGCGTGGGACCACCGCCCCACGGCGCCCGAGTTCGGGCCGATTGGCC
ACATCAAGAATTTCTACGACCGCAGCCATCTCGCGGTGGCCGGGGATGAG
GTCTCCGTGCTGCCGCCTCGGCCACGCCTGCGTTGAGCATTGACGATATT
GAGCATTGAACATTGAACATTGAAAATTTGAATATTGAAAACATTAGATA
TGCTATTATTTACGCACAAAAATTGGACATCAATACAATAATACGCGATT
TGGATCATTCATTGGACACATTTGACAATGACTGCTGGATAAATAGCAGC
GCGATATATATGAGGATTTTTGAAAGCTTGTTTTCAAAACAAGAGACGAC
GGCGGCAGTCAAATTTGGAAACAAAAGTGGAAATAGCAAC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig590:22121..28060-

>mRNA_L-elsbetiae_contig590.14370.1 ID=mRNA_L-elsbetiae_contig590.14370.1|Name=mRNA_L-elsbetiae_contig590.14370.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1434bp|location=Sequence derived from alignment at L-elsbetiae_contig590:22121..28060- (Laminarionema elsbetiae ELsaHSoW15)
ATGTACAGCACAAAACGCGTCAACAAGAACATCGTCGAGGGTGACAGATG
TACAGCACAAAACGCGTCAACAAGAACATCGTCGAGGGTGACAGGTTCAT
CACCGTAGGGGATCCTTACAAAGAGCTCAGGAGACTGCCAGGCCGCTGGA
AGGGCAAGCAGCTCCAAACCGAGGGTTGGTTCATCACCGTAGGGGATCCT
TACAAAGAGCTCAGGAGACTGCCAGGCCGCTGGAAGGGCAAGCAGCTCCA
AACCGAGGGTTGCCCTGCGAACGCGGAAAATGGCAACTTCGCCAAGCTCA
AGTACTCCTCAGAGCCGTTTCAGCCCTGCGAACGCGGAAAATGGCAACTT
CGCCAAGCTCAAGTACTCCTCAGAGCCGTTTCAGGAGACAGAGCGGTTCG
CCAAGACGCAACCGCTCAGCAAGCGACACTTGGGGTTCGGCACCAGGGAT
GCTTTCAAGAGGGGGGAGTTTACGGCCGCCATTCGAACGGAACAGTACCG
GAGACAGAGCGGTTCGCCAAGACGCAACCGCTCAGCAAGCGACACTTGGG
GTTCGGCACCAGGGATGCTTTCAAGAGGGGGGAGTTTACGGCCGCCATTC
GAACGGAACAGTACCGGGAGATGCTGCGGCAGGAGCAGCGGTTGATGAAC
GCAGCGCGGGACTCAAAGGGAGATGCTGCGGCAGGAGCAGCGGTTGATGA
ACGCAGCGCGGGACTCAAAGGCTGAGCAAGAGGGGGTAGAGCGAGCCAAA
GCCAAGCATGCCTCCTCGAGAACGTTCGTGGAAGGCAAACAGGAGATCGA
GTACCTCTACGACGTCGGCCGGTCGCTCGAGAACGAGTTCAACCCTAACC
GAAAACATGACTCGTTTTACGACTTTCAAAAGGCTGAGCAAGAGGGGGTA
GAGCGAGCCAAAGCCAAGCATGCCTCCTCGAGAACGTTCGTGGAAGGCAA
ACAGGAGATCGAGTACCTCTACGACGTCGGCCGGTCGCTCGAGAACGAGT
TCAACCCTAACCGAAAACATGACTCGTTTTACGACTTTCAAAAGTTCAAG
TCCAAGGGGAAGAGGATGGGCCCCTACCGTACCATGGCTAACGACATCGG
GGACATGGCGTGGGACCACCGCCCCACGGCGCCCGAGTTCGGGCCGATTG
GCCACATCAAGAATTTCTACGACCGCAGCCATCTCGCGGTGGCCGGGGAT
GAGGTCTCCGTGCTGCCGCCTCGGCCACGCCTGCGTTGATTCAAGTCCAA
GGGGAAGAGGATGGGCCCCTACCGTACCATGGCTAACGACATCGGGGACA
TGGCGTGGGACCACCGCCCCACGGCGCCCGAGTTCGGGCCGATTGGCCAC
ATCAAGAATTTCTACGACCGCAGCCATCTCGCGGTGGCCGGGGATGAGGT
CTCCGTGCTGCCGCCTCGGCCACGCCTGCGTTGA
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