mRNA_L-elsbetiae_contig5872.14336.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5872.14336.1 vs. uniprot
Match: D7FRI3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRI3_ECTSI) HSP 1 Score: 385 bits (990), Expect = 7.560e-123 Identity = 199/211 (94.31%), Postives = 204/211 (96.68%), Query Frame = 1 Query: 1258 AKRAAIDELTRDQRTVFVNQLTMKVTEDDLAKYFGLLGEVNNVIMLRDKFTSRHKDGGGGMRGQPLPRHKGFAYVEMKSLESVPVVLQLNDRVPDFQKFPVMVKASEAEKNYLAKQAKKAKNPSSAHVILGNAAALAGLKLHIGNLHQNITEDDLGEICRSFGEVTQLILHRDEAGESKRFAFVTYADKESTNACLEKLDGLEVAGKALAV 1890 AKRAAIDELTRDQRTVFVNQLTMKVTEDDLAKYFGLLGEVNNVIMLRDKFTSRHKDGG MRG+ LPRHKGFAYVEMKSLESVPVVLQLN+RVPDFQKFPVMVKASEAEKNYLAKQ +KAKNP+ HVILGNAAALAGLKLHIGNLHQNITEDDLGEICRSFGEVTQLILHRDEAGESKRFAFVTYAD ESTNACLEKLDGLEVAGKAL+V Sbjct: 67 AKRAAIDELTRDQRTVFVNQLTMKVTEDDLAKYFGLLGEVNNVIMLRDKFTSRHKDGGDAMRGRALPRHKGFAYVEMKSLESVPVVLQLNERVPDFQKFPVMVKASEAEKNYLAKQEEKAKNPTG-HVILGNAAALAGLKLHIGNLHQNITEDDLGEICRSFGEVTQLILHRDEAGESKRFAFVTYADTESTNACLEKLDGLEVAGKALSV 276
BLAST of mRNA_L-elsbetiae_contig5872.14336.1 vs. uniprot
Match: A0A6H5L1B8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1B8_9PHAE) HSP 1 Score: 387 bits (995), Expect = 1.670e-119 Identity = 200/211 (94.79%), Postives = 204/211 (96.68%), Query Frame = 1 Query: 1258 AKRAAIDELTRDQRTVFVNQLTMKVTEDDLAKYFGLLGEVNNVIMLRDKFTSRHKDGGGGMRGQPLPRHKGFAYVEMKSLESVPVVLQLNDRVPDFQKFPVMVKASEAEKNYLAKQAKKAKNPSSAHVILGNAAALAGLKLHIGNLHQNITEDDLGEICRSFGEVTQLILHRDEAGESKRFAFVTYADKESTNACLEKLDGLEVAGKALAV 1890 AKRAAIDELTRDQRTVFVNQLTMKVTEDDLAKYFGLLGEVNNVIMLRDKFTSRHKDGG MRG+ LPRHKGFAYVEMK L+SVPVVLQLN+RVPDFQKFPVMVKASEAEKNYLAKQAKKAKNP+ HVILGNAAALAGLKLHIGNLHQNITEDDLGEICRSFGEVTQLILHRDEAGESKRFAFVTYAD ESTNACLEKLDGLEVAGKALAV Sbjct: 409 AKRAAIDELTRDQRTVFVNQLTMKVTEDDLAKYFGLLGEVNNVIMLRDKFTSRHKDGGDAMRGRALPRHKGFAYVEMKDLDSVPVVLQLNERVPDFQKFPVMVKASEAEKNYLAKQAKKAKNPTG-HVILGNAAALAGLKLHIGNLHQNITEDDLGEICRSFGEVTQLILHRDEAGESKRFAFVTYADTESTNACLEKLDGLEVAGKALAV 618
BLAST of mRNA_L-elsbetiae_contig5872.14336.1 vs. uniprot
Match: A0A7S2US71_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2US71_9STRA) HSP 1 Score: 180 bits (457), Expect = 1.920e-47 Identity = 103/216 (47.69%), Postives = 138/216 (63.89%), Query Frame = 1 Query: 1255 QAKRAAIDELTRDQRTVFVNQLTMKVTEDDLAKYFGLLGEVNNVIMLRDKFTSRHKDGGGGMRGQPLPRHKGFAYVEMKSLESVPVVLQLNDRVPDFQKFPVMVKASEAEKNYLAK-QAKKAKNPSSAHVILGNAA---ALAGLKLHIGNLHQNITEDDLGEICRSFGEVTQLILHRDEAGESKRFAFVTYADKESTNACLEKLDGLEVAGKALAV 1890 + ++A +DELT+DQRTVFV+QL MK TE DL K+F +G VNNVI++RDKFT+RHK GFAYVEM LES+P L +N +VPDFQ+FP++VKASEAEKN+LAK +A A + A + A A G ++++GNLH NI EDDL + G+V + L RDE G+SK FAF + +++L GLE+ G+ L V Sbjct: 18 ERQKAEVDELTKDQRTVFVSQLVMKTTEKDLKKFFTKIGPVNNVILIRDKFTNRHK---------------GFAYVEMTELESIPACLLMNGQVPDFQRFPILVKASEAEKNFLAKKEATMAAAQAEAAKVAEEEAKGPATDG-RVYVGNLHLNIGEDDLKSVLEQVGDVEYVKLQRDEMGQSKGFAFAKFRRASHAQDAIDRLAGLELVGQNLKV 217
BLAST of mRNA_L-elsbetiae_contig5872.14336.1 vs. uniprot
Match: A0A7S2MMP2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MMP2_9STRA) HSP 1 Score: 184 bits (468), Expect = 2.470e-47 Identity = 101/211 (47.87%), Postives = 136/211 (64.45%), Query Frame = 1 Query: 1273 IDELTRDQRTVFVNQLTMKVTEDDLAKYFGLLGEVNNVIMLRDKFTSRHKDGGGGMRGQPLPRHKGFAYVEMKSLESVPVVLQLNDRVPDFQKFPVMVKASEAEKNYLAKQAKKAKNPSSAHVILGNAAALAGL---KLHIGNLHQNITEDDLGEICRSFGEVTQLILHRDEAGESKRFAFVTYADKESTNACLEKLDGL--EVAGKALAV 1890 I++LT+DQRTVFV+QL MK E + KYF +G+V VIM+RDK+T+RHK GFAYVEMK LES+P+VL LN VPDFQKFP+++KASEAEKN+LAKQ + +G + +L++GNLH +ITEDDL + + FGE+ + LHRDE G SK +AFV + + N ++K+ GL E+ GKA+ V Sbjct: 149 IEDLTKDQRTVFVSQLVMKAEERSVRKYFEKVGKVKQVIMIRDKYTNRHK---------------GFAYVEMKDLESIPLVLMLNGTVPDFQKFPILIKASEAEKNFLAKQ-----EATPVQDQMGGTGVVVPSVQNRLYVGNLHVHITEDDLRSVLQPFGEIESVHLHRDEVGTSKGYAFVKFLKADDANLAMQKIGGLGLELMGKAIKV 339
BLAST of mRNA_L-elsbetiae_contig5872.14336.1 vs. uniprot
Match: A0A7S3XUB9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XUB9_HETAK) HSP 1 Score: 179 bits (455), Expect = 1.910e-46 Identity = 99/208 (47.60%), Postives = 135/208 (64.90%), Query Frame = 1 Query: 1267 AAIDELTRDQRTVFVNQLTMKVTEDDLAKYFGLLGEVNNVIMLRDKFTSRHKDGGGGMRGQPLPRHKGFAYVEMKSLESVPVVLQLNDRVPDFQKFPVMVKASEAEKNYLAKQAKKAKNPSSAHVILGNAAALAGLKLHIGNLHQNITEDDLGEICRSFGEVTQLILHRDEAGESKRFAFVTYADKESTNACLEKLDGLEVAGKALAV 1890 AA++ELT+DQRTVFV+QL MK E DL +F +G VN VIM+RDK+T+RHK GFAYVEMK LES+P L LN +VPDFQKFP++VKASEAEKN+LA++ K K ++A ++++GNLH +I+E+DL + + GE+ L L ++E G SK +AF Y + E N EKL GL++AG+ + V Sbjct: 118 AAVNELTKDQRTVFVSQLVMKAKERDLKNFFEQIGPVNGVIMIRDKYTNRHK---------------GFAYVEMKELESIPACLLLNGQVPDFQKFPILVKASEAEKNFLAQKEKTEK--ATAEQRKKEEERSRAARIYVGNLHPDISEEDLKVVLKQCGEIESLNLIKNEQGVSKGYAFCQYKNVEDANLAKEKLAGLDLAGRPMKV 308
BLAST of mRNA_L-elsbetiae_contig5872.14336.1 vs. uniprot
Match: A0A8K1FSA1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FSA1_PYTOL) HSP 1 Score: 179 bits (455), Expect = 1.410e-45 Identity = 98/210 (46.67%), Postives = 136/210 (64.76%), Query Frame = 1 Query: 1255 QAKRAAIDELTRDQRTVFVNQLTMKVTEDDLAKYFGLLGEVNNVIMLRDKFTSRHKDGGGGMRGQPLPRHKGFAYVEMKSLESVPVVLQLNDRVPDFQKFPVMVKASEAEKNYLAKQAKKAKNPSSAHVILGNAAALAGLKLHIGNLHQNITEDDLGEICRSFGEVTQLILHRDEAGESKRFAFVTYADKESTNACLEKLDGLEVAGKAL 1884 +AK+ + ELTRD RTVFV QLT KV E DL K+F LG++ +V+++RDKFT+R K GFAYVEM +LE +P VL LN +VPDFQ FP+M+KASEAEKN+ A+ K + S+A +G + A +++ GNLH NITEDDL + ++FGEV + ++RDE G S+ F F+ + + N L K +G+E+AG L Sbjct: 152 RAKQRELMELTRDHRTVFVGQLTQKVRERDLEKFFTQLGKIEHVLLIRDKFTNRSK---------------GFAYVEMSNLEDIPKVLMLNGQVPDFQSFPIMIKASEAEKNFAAR--KDSVMNSAAKGGIGGGSLSAASRIYCGNLHTNITEDDLRAVFQAFGEVLSVNINRDEMGRSRGFGFIQFNTPQEANFALSKGNGIELAGNYL 344
BLAST of mRNA_L-elsbetiae_contig5872.14336.1 vs. uniprot
Match: A0A7S2SFS3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SFS3_9STRA) HSP 1 Score: 179 bits (455), Expect = 2.530e-45 Identity = 99/208 (47.60%), Postives = 135/208 (64.90%), Query Frame = 1 Query: 1273 IDELTRDQRTVFVNQLTMKVTEDDLAKYFGLLGEVNNVIMLRDKFTSRHKDGGGGMRGQPLPRHKGFAYVEMKSLESVPVVLQLNDRVPDFQKFPVMVKASEAEKNYLAKQAKKAKNPSSAHVILGNAAALAGLKLHIGNLHQNITEDDLGEICRSFGEVTQLILHRDEAGESKRFAFVTYADKESTNACLEKL--DGLEVAGKALAV 1890 I++LT+DQRTVFV+QL MK E + KYF +G+V VIM+RDK+T+RHK GFAYVEMK L+S+P+VL LN VPDFQ+FP++VKASEAEKN+LAKQ A ++A +L++GNLH++I ED+L + + FG++ + L RDEAG SK FA VT+ + L K+ +GLE+ GKA+ V Sbjct: 155 IEDLTKDQRTVFVSQLVMKADERKVRKYFEKVGKVKQVIMIRDKYTNRHK---------------GFAYVEMKDLDSIPLVLMLNGTVPDFQRFPILVKASEAEKNFLAKQEAAAAEGANAQT-----------QLYVGNLHEHIGEDELRTVLQPFGQIEAVQLQRDEAGASKGFALVTFVRADDATTALNKISSEGLELMGKAIKV 336
BLAST of mRNA_L-elsbetiae_contig5872.14336.1 vs. uniprot
Match: A0A2D4CE82_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CE82_PYTIN) HSP 1 Score: 174 bits (442), Expect = 5.150e-45 Identity = 98/205 (47.80%), Postives = 130/205 (63.41%), Query Frame = 1 Query: 1279 ELTRDQRTVFVNQLTMKVTEDDLAKYFGLLGEVNNVIMLRDKFTSRHKDGGGGMRGQPLPRHKGFAYVEMKSLESVPVVLQLNDRVPDFQKFPVMVKASEAEKNYLAKQAKKAKNPSSAHVILGNAAAL---AGLKLHIGNLHQNITEDDLGEICRSFGEVTQLILHRDEAGESKRFAFVTYADKESTNACLEKLDGLEVAGKAL 1884 ELTRD RTVFVNQL +KV E DL K+FG LG+V NV++LRDK+T+R K G AYVEM +LE VP VL L+ VP FQ+FP++VKASEAEKN+ A++ N + A G A L A +++ GNLH N+TEDDL + ++FGEV + ++RDE G S+ F F+ + + N L K +GLE+AG L Sbjct: 2 ELTRDHRTVFVNQLMLKVRERDLEKFFGQLGKVENVLLLRDKYTNRSK---------------GIAYVEMSNLEDVPKVLMLSGHVPPFQRFPILVKASEAEKNFAARKDSVMNNAAKAQG--GGDAGLSSSAASRIYCGNLHTNLTEDDLRAVFQAFGEVVSVNINRDEMGRSRGFGFIQFRSPQEANFALSKGNGLELAGNYL 189
BLAST of mRNA_L-elsbetiae_contig5872.14336.1 vs. uniprot
Match: A0A397BZB6_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397BZB6_9STRA) HSP 1 Score: 171 bits (433), Expect = 1.010e-44 Identity = 96/223 (43.05%), Postives = 135/223 (60.54%), Query Frame = 1 Query: 1255 QAKRAAIDELTRDQRTVFVNQLTMKVTEDDLAKYFGLLGEVNNVIMLRDKFTSRHKDGGGGMRGQPLPRHKGFAYVEMKSLESVPVVLQLNDRVPDFQKFPVMVKASEAEKNYLAKQ--------AKKAKNPSSAHVILGNAAAL---AGLKLHIGNLHQNITEDDLGEICRSFGEVTQLILHRDEAGESKRFAFVTYADKESTNACLEKLDGLEVAGKALAV 1890 +AK+ + ELTRD RTVFV QLT KV E DL K+FG L ++ +V+++RDKFT++ K GFAYVE +LE +P VL +N ++P FQ FP+++KASEAEKN+ A++ KA +H G A+ L A ++++GNLH NI EDD+ + +FG+V + L+RD+ G SK F FV + + N L K +GLEVAG L V Sbjct: 74 KAKQRELMELTRDHRTVFVGQLTQKVRERDLEKFFGSLAKLEHVLLIRDKFTNKSK---------------GFAYVEFSNLEDIPKVLVVNGQIPTFQSFPILIKASEAEKNFAARKDAVFSSGPTTKASASGYSHAGSGGASGLSLSAASRVYVGNLHGNINEDDVKAVFSAFGDVVSVALNRDDIGRSKGFGFVQFTTPDEANLALTKANGLEVAGNFLKV 281
BLAST of mRNA_L-elsbetiae_contig5872.14336.1 vs. uniprot
Match: A0A3R7J868_9STRA (Uncharacterized protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7J868_9STRA) HSP 1 Score: 176 bits (447), Expect = 2.730e-44 Identity = 104/221 (47.06%), Postives = 137/221 (61.99%), Query Frame = 1 Query: 1255 QAKRAAIDELTRDQRTVFVNQLTMKVTEDDLAKYFGLLGEVNNVIMLRDKFTSRHKDGGGGMRGQPLPRHKGFAYVEMKSLESVPVVLQLNDRVPDFQKFPVMVKASEAEKNYLAKQ--------AKKAKNPSSAHVILGN---AAALAGLKLHIGNLHQNITEDDLGEICRSFGEVTQLILHRDEAGESKRFAFVTYADKESTNACLEKLDGLEVAGKAL 1884 +AK+ + ELTRD RTVFV QLT KV E DL ++ +G+V NV+++RDKFT+R K GFAYVEM +LE VP VL LN +VPDFQ FP+M+KASEAEKN+ AK+ A A + A G AA A +++ GNLH NITEDDL + +SFGEV + ++RDE G SK F+F+ ++ + N L K +GLE+AG L Sbjct: 135 KAKQRELMELTRDHRTVFVGQLTQKVREKDLTRFLIKIGKVENVMLIRDKFTNRSK---------------GFAYVEMSNLEDVPKVLLLNGQVPDFQVFPIMIKASEAEKNFAAKKDSVMNANAAATAPLTADAPGAAGGMSAAAMSAASRIYCGNLHTNITEDDLRVVFQSFGEVLSVTINRDEMGRSKGFSFIQFSSPQEANFALSKGNGLELAGNYL 340 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5872.14336.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5872.14336.1 >prot_L-elsbetiae_contig5872.14336.1 ID=prot_L-elsbetiae_contig5872.14336.1|Name=mRNA_L-elsbetiae_contig5872.14336.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=364bp MQTAMRRKTAMAMATQDHLPAPPAPPARRTEAAALTAMAKERTRTREERRback to top mRNA from alignment at L-elsbetiae_contig5872:3372..11417+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5872.14336.1 ID=mRNA_L-elsbetiae_contig5872.14336.1|Name=mRNA_L-elsbetiae_contig5872.14336.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=8046bp|location=Sequence derived from alignment at L-elsbetiae_contig5872:3372..11417+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5872:3372..11417+ >mRNA_L-elsbetiae_contig5872.14336.1 ID=mRNA_L-elsbetiae_contig5872.14336.1|Name=mRNA_L-elsbetiae_contig5872.14336.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2184bp|location=Sequence derived from alignment at L-elsbetiae_contig5872:3372..11417+ (Laminarionema elsbetiae ELsaHSoW15)back to top |